Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239735598
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239735598 leucine rich repeat containing 36 isoform 2 [Homo
sapiens]
(633 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239735598 leucine rich repeat containing 36 isoform 2 [Homo s... 1259 0.0
gi|239735605 leucine rich repeat containing 36 isoform 1 [Homo s... 1240 0.0
gi|62899065 centrosomal protein 72 kDa [Homo sapiens] 68 2e-11
gi|115495445 ankyrin repeat domain 30A [Homo sapiens] 44 3e-04
gi|10190682 chromobox homolog 8 [Homo sapiens] 41 0.004
gi|222537750 ankyrin repeat domain 30B [Homo sapiens] 38 0.032
gi|87299628 biorientation of chromosomes in cell division 1-like... 37 0.072
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 36 0.095
gi|239754668 PREDICTED: mucin 12 [Homo sapiens] 36 0.12
gi|117320513 coiled-coil domain containing 155 [Homo sapiens] 36 0.12
gi|56961680 coiled-coil domain containing 147 [Homo sapiens] 35 0.16
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens] 35 0.21
gi|33946313 ninein isoform 4 [Homo sapiens] 35 0.27
gi|33946321 ninein isoform 5 [Homo sapiens] 35 0.27
gi|148536871 ninein isoform 1 [Homo sapiens] 35 0.27
gi|148536869 ninein isoform 2 [Homo sapiens] 35 0.27
gi|57768564 hypothetical protein LOC23281 isoform b [Homo sapiens] 35 0.27
gi|140161498 hypothetical protein LOC23281 isoform a [Homo sapiens] 35 0.27
gi|58535453 CDK5 regulatory subunit associated protein 2 isoform... 34 0.36
gi|58535451 CDK5 regulatory subunit associated protein 2 isoform... 34 0.36
gi|35038601 spindle assembly abnormal protein 6 [Homo sapiens] 34 0.47
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 33 0.61
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 33 0.61
gi|4503179 oral-facial-digital syndrome 1 [Homo sapiens] 33 0.61
gi|115647981 glutamine and serine rich 1 [Homo sapiens] 33 0.61
gi|38570058 hypothetical protein LOC80129 [Homo sapiens] 33 0.80
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 33 0.80
gi|110347443 TATA element modulatory factor 1 [Homo sapiens] 33 0.80
gi|71061468 centromere protein E [Homo sapiens] 33 0.80
gi|14249254 EF-hand calcium binding domain 4B isoform c [Homo sa... 33 0.80
>gi|239735598 leucine rich repeat containing 36 isoform 2 [Homo
sapiens]
Length = 633
Score = 1259 bits (3258), Expect = 0.0
Identities = 633/633 (100%), Positives = 633/633 (100%)
Query: 1 MLRPRFLPPDDRTVREGERKAAKLHFSQLGNSENFLLEVEKSSREKTMKNCVTGESSASK 60
MLRPRFLPPDDRTVREGERKAAKLHFSQLGNSENFLLEVEKSSREKTMKNCVTGESSASK
Sbjct: 1 MLRPRFLPPDDRTVREGERKAAKLHFSQLGNSENFLLEVEKSSREKTMKNCVTGESSASK 60
Query: 61 VSANVDSRIEMDSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQTQEVARR 120
VSANVDSRIEMDSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQTQEVARR
Sbjct: 61 VSANVDSRIEMDSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQTQEVARR 120
Query: 121 EMPSDNHQEDEFRHYSPRQSTVRSPEKMTREGYQVSFLDNKSSGSSPEKELIPKPDTFHL 180
EMPSDNHQEDEFRHYSPRQSTVRSPEKMTREGYQVSFLDNKSSGSSPEKELIPKPDTFHL
Sbjct: 121 EMPSDNHQEDEFRHYSPRQSTVRSPEKMTREGYQVSFLDNKSSGSSPEKELIPKPDTFHL 180
Query: 181 THDASLSKCLDVGDSSQIHPYQLPSDVGLENYDSCYSQTLSLHGSLGKRPQRSKNYQEYS 240
THDASLSKCLDVGDSSQIHPYQLPSDVGLENYDSCYSQTLSLHGSLGKRPQRSKNYQEYS
Sbjct: 181 THDASLSKCLDVGDSSQIHPYQLPSDVGLENYDSCYSQTLSLHGSLGKRPQRSKNYQEYS 240
Query: 241 IKPSNDIKTTASHSCGDLLTSLSNPDSSTGRLLKLSSDLYATTHFNSDPAVLVNVEQQLS 300
IKPSNDIKTTASHSCGDLLTSLSNPDSSTGRLLKLSSDLYATTHFNSDPAVLVNVEQQLS
Sbjct: 241 IKPSNDIKTTASHSCGDLLTSLSNPDSSTGRLLKLSSDLYATTHFNSDPAVLVNVEQQLS 300
Query: 301 TSLDDLTPAHGSVPNNAVLGNRTTPLRTLLLSPGTSEHRKIFTKRSLSPSKRGFKWKDNI 360
TSLDDLTPAHGSVPNNAVLGNRTTPLRTLLLSPGTSEHRKIFTKRSLSPSKRGFKWKDNI
Sbjct: 301 TSLDDLTPAHGSVPNNAVLGNRTTPLRTLLLSPGTSEHRKIFTKRSLSPSKRGFKWKDNI 360
Query: 361 LANLNLKHGFQDATGSEPLSSDLGSLHGLAGNHSPPISARTPHVATVLRQLLELVDKHWN 420
LANLNLKHGFQDATGSEPLSSDLGSLHGLAGNHSPPISARTPHVATVLRQLLELVDKHWN
Sbjct: 361 LANLNLKHGFQDATGSEPLSSDLGSLHGLAGNHSPPISARTPHVATVLRQLLELVDKHWN 420
Query: 421 GSGSLLLNKKFLGPARDLLLSLVVPAPSQPRCCSHPEDTMKAFCRRELELKEAAQLVPND 480
GSGSLLLNKKFLGPARDLLLSLVVPAPSQPRCCSHPEDTMKAFCRRELELKEAAQLVPND
Sbjct: 421 GSGSLLLNKKFLGPARDLLLSLVVPAPSQPRCCSHPEDTMKAFCRRELELKEAAQLVPND 480
Query: 481 MESLKQKLVRVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDDLLHKNQQLTMQVACLN 540
MESLKQKLVRVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDDLLHKNQQLTMQVACLN
Sbjct: 481 MESLKQKLVRVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDDLLHKNQQLTMQVACLN 540
Query: 541 QELAQLKKLEKTVAILHESQRSLVVTNEYLLQQLNKEPKGYSGKALLPPEKGHHLGRSSP 600
QELAQLKKLEKTVAILHESQRSLVVTNEYLLQQLNKEPKGYSGKALLPPEKGHHLGRSSP
Sbjct: 541 QELAQLKKLEKTVAILHESQRSLVVTNEYLLQQLNKEPKGYSGKALLPPEKGHHLGRSSP 600
Query: 601 FGKSTLSSSSPVAHETGQYLIQSVLDAAPEPGL 633
FGKSTLSSSSPVAHETGQYLIQSVLDAAPEPGL
Sbjct: 601 FGKSTLSSSSPVAHETGQYLIQSVLDAAPEPGL 633
>gi|239735605 leucine rich repeat containing 36 isoform 1 [Homo
sapiens]
Length = 754
Score = 1240 bits (3208), Expect = 0.0
Identities = 624/624 (100%), Positives = 624/624 (100%)
Query: 10 DDRTVREGERKAAKLHFSQLGNSENFLLEVEKSSREKTMKNCVTGESSASKVSANVDSRI 69
DDRTVREGERKAAKLHFSQLGNSENFLLEVEKSSREKTMKNCVTGESSASKVSANVDSRI
Sbjct: 131 DDRTVREGERKAAKLHFSQLGNSENFLLEVEKSSREKTMKNCVTGESSASKVSANVDSRI 190
Query: 70 EMDSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQTQEVARREMPSDNHQE 129
EMDSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQTQEVARREMPSDNHQE
Sbjct: 191 EMDSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQTQEVARREMPSDNHQE 250
Query: 130 DEFRHYSPRQSTVRSPEKMTREGYQVSFLDNKSSGSSPEKELIPKPDTFHLTHDASLSKC 189
DEFRHYSPRQSTVRSPEKMTREGYQVSFLDNKSSGSSPEKELIPKPDTFHLTHDASLSKC
Sbjct: 251 DEFRHYSPRQSTVRSPEKMTREGYQVSFLDNKSSGSSPEKELIPKPDTFHLTHDASLSKC 310
Query: 190 LDVGDSSQIHPYQLPSDVGLENYDSCYSQTLSLHGSLGKRPQRSKNYQEYSIKPSNDIKT 249
LDVGDSSQIHPYQLPSDVGLENYDSCYSQTLSLHGSLGKRPQRSKNYQEYSIKPSNDIKT
Sbjct: 311 LDVGDSSQIHPYQLPSDVGLENYDSCYSQTLSLHGSLGKRPQRSKNYQEYSIKPSNDIKT 370
Query: 250 TASHSCGDLLTSLSNPDSSTGRLLKLSSDLYATTHFNSDPAVLVNVEQQLSTSLDDLTPA 309
TASHSCGDLLTSLSNPDSSTGRLLKLSSDLYATTHFNSDPAVLVNVEQQLSTSLDDLTPA
Sbjct: 371 TASHSCGDLLTSLSNPDSSTGRLLKLSSDLYATTHFNSDPAVLVNVEQQLSTSLDDLTPA 430
Query: 310 HGSVPNNAVLGNRTTPLRTLLLSPGTSEHRKIFTKRSLSPSKRGFKWKDNILANLNLKHG 369
HGSVPNNAVLGNRTTPLRTLLLSPGTSEHRKIFTKRSLSPSKRGFKWKDNILANLNLKHG
Sbjct: 431 HGSVPNNAVLGNRTTPLRTLLLSPGTSEHRKIFTKRSLSPSKRGFKWKDNILANLNLKHG 490
Query: 370 FQDATGSEPLSSDLGSLHGLAGNHSPPISARTPHVATVLRQLLELVDKHWNGSGSLLLNK 429
FQDATGSEPLSSDLGSLHGLAGNHSPPISARTPHVATVLRQLLELVDKHWNGSGSLLLNK
Sbjct: 491 FQDATGSEPLSSDLGSLHGLAGNHSPPISARTPHVATVLRQLLELVDKHWNGSGSLLLNK 550
Query: 430 KFLGPARDLLLSLVVPAPSQPRCCSHPEDTMKAFCRRELELKEAAQLVPNDMESLKQKLV 489
KFLGPARDLLLSLVVPAPSQPRCCSHPEDTMKAFCRRELELKEAAQLVPNDMESLKQKLV
Sbjct: 551 KFLGPARDLLLSLVVPAPSQPRCCSHPEDTMKAFCRRELELKEAAQLVPNDMESLKQKLV 610
Query: 490 RVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDDLLHKNQQLTMQVACLNQELAQLKKL 549
RVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDDLLHKNQQLTMQVACLNQELAQLKKL
Sbjct: 611 RVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDDLLHKNQQLTMQVACLNQELAQLKKL 670
Query: 550 EKTVAILHESQRSLVVTNEYLLQQLNKEPKGYSGKALLPPEKGHHLGRSSPFGKSTLSSS 609
EKTVAILHESQRSLVVTNEYLLQQLNKEPKGYSGKALLPPEKGHHLGRSSPFGKSTLSSS
Sbjct: 671 EKTVAILHESQRSLVVTNEYLLQQLNKEPKGYSGKALLPPEKGHHLGRSSPFGKSTLSSS 730
Query: 610 SPVAHETGQYLIQSVLDAAPEPGL 633
SPVAHETGQYLIQSVLDAAPEPGL
Sbjct: 731 SPVAHETGQYLIQSVLDAAPEPGL 754
>gi|62899065 centrosomal protein 72 kDa [Homo sapiens]
Length = 647
Score = 68.2 bits (165), Expect = 2e-11
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 33/211 (15%)
Query: 391 GNHSPPISARTPHVATVLRQLLELVDKHWNGSGSLLLNKKFLGPARDLLLSLVVPAPSQP 450
G+HS +T A +L LL+LVD+ W G SL N+ FL AR +L S+ +Q
Sbjct: 406 GSHSALPGKKTALQAALLETLLDLVDRSWGGCRSLHSNEAFLAQARHILSSVEEFTAAQD 465
Query: 451 RCCSHPEDT-----------------MKAFCRRELELKEAAQLVPNDMESLKQKLVRVLE 493
ED + R E+ +++ L+Q L + LE
Sbjct: 466 SSAMVGEDVGSLALESKSLQSRLAEQQQQHAREMSEVTAELHHTHKELDDLRQHLDKSLE 525
Query: 494 EN-------LILSEKIQQLEEGAAISI-VSGQQSHTYDDLLHKNQQLTMQVACLNQELAQ 545
EN L + ++++ + A +++ ++G Q+ ++L ++ L Q L
Sbjct: 526 ENSRLKSLLLSMKKEVKSADTAATLNLQIAGLQTSV--------KRLCGEIVELKQHLEH 577
Query: 546 LKKLEKTVAILHESQRSLVVTNEYLLQQLNK 576
K+++ +L ES SLV TNE+LLQ+L++
Sbjct: 578 YDKIQELTQMLQESHSSLVSTNEHLLQELSQ 608
Score = 36.6 bits (83), Expect = 0.072
Identities = 125/581 (21%), Positives = 201/581 (34%), Gaps = 87/581 (14%)
Query: 2 LRPRFLPPDDRTVREGERKAAKLHFS---QLGNSENFLLEVEKSSREKTMKNCVTGESSA 58
L P+ DDR VR ERKA++LHF+ L + E+ +++ C +
Sbjct: 127 LLPKLQQLDDRPVRASERKASRLHFASEDSLDSKESVPASLKEGRPHHPRAKCTEALAKQ 186
Query: 59 SKVSANVDSRI-----EMDSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQ 113
S V D + E + + G + STS +Q D +
Sbjct: 187 SLVMDADDEAVLNLIAECEWDLG----------RPPGSTSFSQKGREADSRGSQESRHLL 236
Query: 114 TQEVARREMPSDNHQEDEFRHYSPRQSTVRSPEKMTREGYQVSFLDNKSSGSSPEKELIP 173
+ ++ + + Q E R S R + EKM Q+ G+ PE P
Sbjct: 237 SPQLVQYQCGDSGKQGRETRRSSCRGCCL---EKMPWS--QLCGELPPLYGAEPEASRAP 291
Query: 174 KPDTFHLTHDASLSKCLDVGDSSQIHPYQLPSDVGLENYDSCYSQTLSLHGSLGKRPQRS 233
+P T+ H S +D DS+ L ++ L G KR
Sbjct: 292 RPHTYFTPHPDS----MDTEDSASSQKLDLSGEM--------VPGPLPAPGKCRKRRMPV 339
Query: 234 KNYQEYSIKPSNDIKTTASHSCGDLLTSLSNPDSSTGRLLKLSSDLYATTHFNSDPAVLV 293
+Q +S + +H SLS DSS R S P
Sbjct: 340 GRFQTFSDQEGLGC-PERTHGSSVPKESLSRQDSSESR----------NGRTLSQPEASE 388
Query: 294 NVEQQLSTSLDDLTPAHGSVPNNAVLGNRTTPLRTLLLSPGTSEHRKIFTKRSLSPSKRG 353
EQ+ D P+ GS ++A+ G +T LL + R RSL ++
Sbjct: 389 TEEQRSRGVTDTREPSPGS--HSALPGKKTALQAALLETLLDLVDRSWGGCRSLHSNEAF 446
Query: 354 FKWKDNILANLNLKHGFQDATG------------SEPLSSDLGSLHGLAGNHSPPISART 401
+IL+++ QD++ S+ L S L ++A
Sbjct: 447 LAQARHILSSVEEFTAAQDSSAMVGEDVGSLALESKSLQSRLAEQQQQHAREMSEVTAEL 506
Query: 402 PHVATVLRQLLELVDKHWNGSGSLLLNKKFLGPARDLLLSLVVPAPSQPRCCSHPEDTMK 461
H L L + +DK + L + LLLS+ S DT
Sbjct: 507 HHTHKELDDLRQHLDKSLEENSRL----------KSLLLSMKKEVKS--------ADTAA 548
Query: 462 AFCRRELELKEAAQLVPNDMESLKQKLVRVLEENLILSEKIQQLEEGAAISIVSGQQSHT 521
+ L+ + + + ++ LKQ LE + E Q L+E + S+VS + H
Sbjct: 549 TLNLQIAGLQTSVKRLCGEIVELKQH----LEHYDKIQELTQMLQESHS-SLVSTNE-HL 602
Query: 522 YDDLLHKNQQLTMQVACLNQELAQLKKLEKTVAILHESQRS 562
+L Q +V ++ +LK KT+A+ S S
Sbjct: 603 LQELSQVRAQHRAEVEQMHWSYQELK---KTMALFPHSSAS 640
>gi|115495445 ankyrin repeat domain 30A [Homo sapiens]
Length = 1341
Score = 44.3 bits (103), Expect = 3e-04
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 19/122 (15%)
Query: 482 ESLKQKLVRVLEENLILSEKIQQLEEGAAISIVS--------GQQSHTYDD---LLHKNQ 530
E ++++L R+ E++ E QQLE+ I + Q SHT+++ LLH+N
Sbjct: 990 EKIREELGRIEEQHRKELEVKQQLEQALRIQDIELKSVESNLNQVSHTHENENYLLHENC 1049
Query: 531 QLTMQVACLNQELAQLK--------KLEKTVAILHESQRSLVVTNEYLLQQLNKEPKGYS 582
L ++A L E+A LK K + + IL E L +T + + L K YS
Sbjct: 1050 MLKKEIAMLKLEIATLKHQYQEKENKYFEDIKILKEKNAELQMTLKLKEESLTKRASQYS 1109
Query: 583 GK 584
G+
Sbjct: 1110 GQ 1111
>gi|10190682 chromobox homolog 8 [Homo sapiens]
Length = 389
Score = 40.8 bits (94), Expect = 0.004
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 5/108 (4%)
Query: 72 DSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQTQEVARREMPSDNHQE-- 129
DS +G+ IP+P R +D STS + G R+ L T T R E P D ++
Sbjct: 97 DSARGIRIPYPGRSPQDLASTSRAR-EGLRNMGLSPPASSTSTSSTCRAEAPRDRDRDRD 155
Query: 130 -DEFRHYSPRQSTVRSPEKMTREGYQVSFLDNK-SSGSSPEKELIPKP 175
D R + R E+ S +D+K SS K+ PKP
Sbjct: 156 RDRERDRERERERERERERERERERGTSRVDDKPSSPGDSSKKRGPKP 203
>gi|222537750 ankyrin repeat domain 30B [Homo sapiens]
Length = 1392
Score = 37.7 bits (86), Expect = 0.032
Identities = 42/170 (24%), Positives = 67/170 (39%), Gaps = 45/170 (26%)
Query: 457 EDTMKAFCRRELELKEAAQLVPN-------------------DMESLKQKLVRVLEENLI 497
E T FC + EL EA ++ + E K++ V +L+E +
Sbjct: 975 EQTKNKFCVLQKELSEAKEIKSQLENQKAKWEQELCSVRLTLNQEEEKRRNVDILKEKIR 1034
Query: 498 LSEKI-------QQLEEGAAISIVS--------GQQSHTYD---DLLHKNQQLTMQVACL 539
E++ QQLE+ I + Q SHT++ DL H+N L ++A L
Sbjct: 1035 PEEQLRKKLEVKQQLEQTLRIQDIELKSVTSNLNQVSHTHESENDLFHENCMLKKEIAML 1094
Query: 540 NQELAQLK--------KLEKTVAILHESQRSLVVTNEYLLQQLNKEPKGY 581
E+A LK K + + IL E L +T + + + K Y
Sbjct: 1095 KLEVATLKHQHQVKENKYFEDIKILQEKNAELQMTLKLKQKTVTKRASQY 1144
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 36.6 bits (83), Expect = 0.072
Identities = 58/245 (23%), Positives = 100/245 (40%), Gaps = 35/245 (14%)
Query: 10 DDRTVREGERKAAKLHFSQ---LGNSENFLLEVEKSSREKTMKNCVTGESSASKVSANVD 66
D R V E +K + L SE+ E EK S K +K+ V +S SK + +
Sbjct: 579 DSRNVEENSKKKQQYEEDSKETLKTSEH--CEKEKISSSKELKH-VHAKSEPSKPARRLS 635
Query: 67 SRIEM-DSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQTQEVARREMPSD 125
+ + D NK RE K ST G +++ T T++V R+ S+
Sbjct: 636 ESLHVVDENKNE--SKLEREHKRRTSTPVIM-EGVQEE--------TDTRDVKRQVERSE 684
Query: 126 NHQEDEFRHYSPRQSTVRSPEKMTREGYQVSFLDN------KSSGSSPEKELIPKPDTFH 179
E+ + ++ST+++ + + ++ + L + KSS PE+E P D
Sbjct: 685 ICTEEPQK----QKSTLKNEKHLKKDDSETPHLKSLLKKEVKSSKEKPEREKTPSEDKLS 740
Query: 180 LTHDASLSKCLDVGDSSQIHPYQLPSDVGL---ENYDSCYSQTLSLHGSLGKRPQRSKNY 236
+ H GD +++H S+ GL EN QT +R + +N
Sbjct: 741 VKHKYKGDCMHKTGDETELH----SSEKGLKVEENIQKQSQQTKLSSDDKTERKSKHRNE 796
Query: 237 QEYSI 241
++ S+
Sbjct: 797 RKLSV 801
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 36.2 bits (82), Expect = 0.095
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 13/118 (11%)
Query: 465 RRELELKE--AAQLVPNDMESLKQKLVRVLEENLILSEKIQQLEEGAAISIVSGQQSHTY 522
R E E E A+L D+ ++QKL+ V +EN L+ +IQ G ++S + + H
Sbjct: 2695 RNETETAEERVAELA-RDLVEMEQKLLMVTKENKGLTAQIQSF--GRSMSSLQNSRDHAN 2751
Query: 523 DDLLHKNQQLTMQVACLNQELAQLKKL----EKTVAILHESQRSLVVTNEYLLQQLNK 576
++L +L + +ELAQLK+ + A+L E+ S+ T E L L K
Sbjct: 2752 EEL----DELKRKYDASLKELAQLKEQGLLNRERDALLSETAFSMNSTEENSLSHLEK 2805
>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
Length = 1952
Score = 35.8 bits (81), Expect = 0.12
Identities = 42/212 (19%), Positives = 79/212 (37%), Gaps = 17/212 (8%)
Query: 132 FRHYSPRQSTVRSPEKMTREGYQVSFLDNKSSGSSPEKELIPKPDTFHLTHDASLSKCLD 191
F+ + + T+ +P T ++S + S S P TF + +++
Sbjct: 1139 FQSWPSSKDTMPAPPTTTSAFVELSTTSHGSPSSIPTTHFSASSTTFGRSEESTTVH--- 1195
Query: 192 VGDSSQIHPYQLPSDVGLENYDSCYSQTLSLHGSLGKRPQRSKNYQEYSIKPSNDIKTTA 251
SS + P PS ++ + H S G ++ ++ E S ++
Sbjct: 1196 ---SSPVAPATTPSPAR-STTSGLVEESTAYHSSPGST--QTMHFPESSTASGRSEESRT 1249
Query: 252 SHSCGDLLTSLSNPDSSTGRLLKLSSDLY------ATTHFNSDPAVLVNVEQQLSTSLDD 305
SHS ++S+P S+T L++ + + ATTHF E+ ++
Sbjct: 1250 SHS--STTHTISSPPSTTSALVEEPTSYHSSPGSIATTHFPESSTTSGRSEESTASHSSP 1307
Query: 306 LTPAHGSVPNNAVLGNRTTPLRTLLLSPGTSE 337
T +P + R T +SPG+ E
Sbjct: 1308 DTNGITPLPAHFTTSGRIAESTTFYISPGSME 1339
Score = 30.4 bits (67), Expect = 5.2
Identities = 36/138 (26%), Positives = 47/138 (34%), Gaps = 13/138 (9%)
Query: 43 SREKTMKNCVTGESSASKVSANVDSRIEMDSNKGLFIPFPNREIKDSLSTSATQGNGTRD 102
S ++T+ T S S+ S SR I FP+ +S +T +
Sbjct: 210 SPDRTLSPARTTSSGVSEKSTTSHSRPGPTHT----IAFPDSTTMPGVSQESTASHSIPG 265
Query: 103 QKLDTFPLGTQTQEVARREMPSDNHQEDEFRHYSPRQS-TVRSPEKMTREGYQVSFLDNK 161
T GT T PS E H SP + T R P+ T G +
Sbjct: 266 STDTTLSPGTTT--------PSSLGPESTTFHSSPGYTKTTRLPDNTTTSGLLEASTPVH 317
Query: 162 SSGSSPEKELIPKPDTFH 179
SS SP L P T H
Sbjct: 318 SSTGSPHTTLSPASSTTH 335
>gi|117320513 coiled-coil domain containing 155 [Homo sapiens]
Length = 562
Score = 35.8 bits (81), Expect = 0.12
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 469 ELKEAAQLVPNDMESLKQKLVRVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDDLLHK 528
EL+ A L+ + +E L+ R++ EN L ++ EEG+A G++ LH
Sbjct: 155 ELQATADLL-SSLEDLELSNRRLVGENAKLQRSMETAEEGSARL---GEEILALRKQLHS 210
Query: 529 NQQLTMQVACLNQELAQLKKLEKTVAILHESQRSLV 564
QQ +++EL LK L ++ L E RSL+
Sbjct: 211 TQQALQFAKAMDEELEDLKTLARS---LEEQNRSLL 243
>gi|56961680 coiled-coil domain containing 147 [Homo sapiens]
Length = 872
Score = 35.4 bits (80), Expect = 0.16
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 466 RELELKEAAQLVPNDMESLKQKLVRVLEENLILSEK-IQQLEE----GAAISIVSGQQSH 520
R+ E+K Q V E L QKL + L+E IL+E+ ++LE+ A + + Q S
Sbjct: 235 RQTEIKALQQYVQKSKEEL-QKLEQQLKEQKILNERAAKELEQFQMRNAKLQQENEQHSL 293
Query: 521 TYDDLLHKNQQLTMQVACLNQELAQLK----KLEKTVAILHE 558
+ L +NQQ +++ +E+ Q++ KL K +H+
Sbjct: 294 VCEQLSQENQQKALELKAKEEEVHQMRLDIGKLNKIREQIHK 335
>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
Length = 1780
Score = 35.0 bits (79), Expect = 0.21
Identities = 25/111 (22%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 466 RELELKEAAQLVPNDMESLKQKLVRVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDDL 525
+EL+LKE + N+++ +K L EE ++ ++L+E +S S + + DL
Sbjct: 1181 KELKLKEEITQLTNNLQDMKHLLQLKEEEEETNRQETEKLKE--ELSASSARTQNLKADL 1238
Query: 526 LHKNQQLTMQVACLNQELAQLKKLEKTVAILHESQRSLVVTNEYLLQQLNK 576
K + L Q+K+++K V+++ + + L + L ++ N+
Sbjct: 1239 QRKEEDYADLKEKLTDAKKQIKQVQKEVSVMRDEDKLLRIKINELEKKKNQ 1289
>gi|33946313 ninein isoform 4 [Homo sapiens]
Length = 2096
Score = 34.7 bits (78), Expect = 0.27
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 13/94 (13%)
Query: 477 VPNDMESLKQKLVRVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDDLLHKNQQLTMQV 536
+P K V EN L E+++ +E YD+ L N++LT +V
Sbjct: 1247 IPEASPKYKLLYEDVSRENDCLQEELRMMET-------------RYDEALENNKELTAEV 1293
Query: 537 ACLNQELAQLKKLEKTVAILHESQRSLVVTNEYL 570
L EL +++++ +T L +S + + NE L
Sbjct: 1294 FRLQDELKKMEEVTETFLSLEKSYDEVKIENEEL 1327
>gi|33946321 ninein isoform 5 [Homo sapiens]
Length = 2090
Score = 34.7 bits (78), Expect = 0.27
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 13/94 (13%)
Query: 477 VPNDMESLKQKLVRVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDDLLHKNQQLTMQV 536
+P K V EN L E+++ +E YD+ L N++LT +V
Sbjct: 1241 IPEASPKYKLLYEDVSRENDCLQEELRMMET-------------RYDEALENNKELTAEV 1287
Query: 537 ACLNQELAQLKKLEKTVAILHESQRSLVVTNEYL 570
L EL +++++ +T L +S + + NE L
Sbjct: 1288 FRLQDELKKMEEVTETFLSLEKSYDEVKIENEEL 1321
>gi|148536871 ninein isoform 1 [Homo sapiens]
Length = 2046
Score = 34.7 bits (78), Expect = 0.27
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 13/94 (13%)
Query: 477 VPNDMESLKQKLVRVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDDLLHKNQQLTMQV 536
+P K V EN L E+++ +E YD+ L N++LT +V
Sbjct: 1241 IPEASPKYKLLYEDVSRENDCLQEELRMMET-------------RYDEALENNKELTAEV 1287
Query: 537 ACLNQELAQLKKLEKTVAILHESQRSLVVTNEYL 570
L EL +++++ +T L +S + + NE L
Sbjct: 1288 FRLQDELKKMEEVTETFLSLEKSYDEVKIENEEL 1321
>gi|148536869 ninein isoform 2 [Homo sapiens]
Length = 2133
Score = 34.7 bits (78), Expect = 0.27
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 13/94 (13%)
Query: 477 VPNDMESLKQKLVRVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDDLLHKNQQLTMQV 536
+P K V EN L E+++ +E YD+ L N++LT +V
Sbjct: 1241 IPEASPKYKLLYEDVSRENDCLQEELRMMET-------------RYDEALENNKELTAEV 1287
Query: 537 ACLNQELAQLKKLEKTVAILHESQRSLVVTNEYL 570
L EL +++++ +T L +S + + NE L
Sbjct: 1288 FRLQDELKKMEEVTETFLSLEKSYDEVKIENEEL 1321
>gi|57768564 hypothetical protein LOC23281 isoform b [Homo sapiens]
Length = 348
Score = 34.7 bits (78), Expect = 0.27
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 38/170 (22%)
Query: 457 EDTMKAFCRRELELKEAA-QLVPNDMESLKQ-----------------KLVRVLEENLIL 498
E+ ++ +LE+ A Q + DM+SLKQ +L ++ E+N+IL
Sbjct: 193 EEALRKNTEEQLEIALAPYQHLEEDMKSLKQVLEMKNQQIHEQEKKILELEKLAEKNIIL 252
Query: 499 SEKIQQLEEGAAISIVSGQQSHTYDDLLHKNQQLTMQVACLNQELAQLKK-LEKTVAILH 557
EKIQ L+ QQ+ +DL + Q T+ L++E A L++ +EK
Sbjct: 253 EEKIQVLQ----------QQN---EDLKARIDQNTVVTRQLSEENANLQEYVEKET---- 295
Query: 558 ESQRSLVVTNEYLLQQLNK-EPKG-YSGKALLPPEKGHHLGRSSPFGKST 605
+ ++ L TNE LL +L +P P +G G SSP ST
Sbjct: 296 QEKKRLSRTNEELLWKLQTGDPTSPIKLSPTSPVYRGSSSGPSSPARVST 345
>gi|140161498 hypothetical protein LOC23281 isoform a [Homo sapiens]
Length = 1379
Score = 34.7 bits (78), Expect = 0.27
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 38/170 (22%)
Query: 457 EDTMKAFCRRELELKEAA-QLVPNDMESLKQ-----------------KLVRVLEENLIL 498
E+ ++ +LE+ A Q + DM+SLKQ +L ++ E+N+IL
Sbjct: 1224 EEALRKNTEEQLEIALAPYQHLEEDMKSLKQVLEMKNQQIHEQEKKILELEKLAEKNIIL 1283
Query: 499 SEKIQQLEEGAAISIVSGQQSHTYDDLLHKNQQLTMQVACLNQELAQLKK-LEKTVAILH 557
EKIQ L+ QQ+ +DL + Q T+ L++E A L++ +EK
Sbjct: 1284 EEKIQVLQ----------QQN---EDLKARIDQNTVVTRQLSEENANLQEYVEKET---- 1326
Query: 558 ESQRSLVVTNEYLLQQLNK-EPKG-YSGKALLPPEKGHHLGRSSPFGKST 605
+ ++ L TNE LL +L +P P +G G SSP ST
Sbjct: 1327 QEKKRLSRTNEELLWKLQTGDPTSPIKLSPTSPVYRGSSSGPSSPARVST 1376
>gi|58535453 CDK5 regulatory subunit associated protein 2 isoform b
[Homo sapiens]
Length = 1814
Score = 34.3 bits (77), Expect = 0.36
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 27/113 (23%)
Query: 469 ELKEAAQLVPNDMESLKQKLVRVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDDLLHK 528
+L+E+ +E L+++ V EEN E++Q+ EG S ++ H
Sbjct: 1479 KLRESLSRKTVSLEHLQREYASVKEEN----ERLQK--EG------SEKERH-------- 1518
Query: 529 NQQLTMQVACLNQELAQLKKLEKTVAILHESQRSLVVTNEYLLQQLNKEPKGY 581
NQQL +V C QEL+++++ K ++ L+ N+ LLQ L E K Y
Sbjct: 1519 NQQLIQEVRCSGQELSRVQEEVKL-------RQQLLSQNDKLLQSLRVELKAY 1564
>gi|58535451 CDK5 regulatory subunit associated protein 2 isoform a
[Homo sapiens]
Length = 1893
Score = 34.3 bits (77), Expect = 0.36
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 27/113 (23%)
Query: 469 ELKEAAQLVPNDMESLKQKLVRVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDDLLHK 528
+L+E+ +E L+++ V EEN E++Q+ EG S ++ H
Sbjct: 1479 KLRESLSRKTVSLEHLQREYASVKEEN----ERLQK--EG------SEKERH-------- 1518
Query: 529 NQQLTMQVACLNQELAQLKKLEKTVAILHESQRSLVVTNEYLLQQLNKEPKGY 581
NQQL +V C QEL+++++ K ++ L+ N+ LLQ L E K Y
Sbjct: 1519 NQQLIQEVRCSGQELSRVQEEVKL-------RQQLLSQNDKLLQSLRVELKAY 1564
>gi|35038601 spindle assembly abnormal protein 6 [Homo sapiens]
Length = 657
Score = 33.9 bits (76), Expect = 0.47
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 21/125 (16%)
Query: 457 EDTMKAFCRRELELKEAAQLVPNDMESLKQKL----VRVLEENLILSEKIQQLEEGAAIS 512
E T+K+ L+ E + + D+++L KL +++ +L+EK ++L++
Sbjct: 370 EATIKSLSAELLKANEIIKKLQGDLKTLMGKLKLKNTVTIQQEKLLAEKEEKLQK----- 424
Query: 513 IVSGQQSHTYDDLLHKNQQLTMQVACLNQELAQLKKLEKTVAILHESQRSLVVTNEYLLQ 572
+Q D + ++ ++ Q C QE +LE TV L ES++ L+ NE L+
Sbjct: 425 ----EQKELQD--VGQSLRIKEQEVCKLQE-----QLEATVKKLEESKQ-LLKNNEKLIT 472
Query: 573 QLNKE 577
LNKE
Sbjct: 473 WLNKE 477
>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
sapiens]
Length = 2036
Score = 33.5 bits (75), Expect = 0.61
Identities = 41/212 (19%), Positives = 80/212 (37%), Gaps = 17/212 (8%)
Query: 132 FRHYSPRQSTVRSPEKMTREGYQVSFLDNKSSGSSPEKELIPKPDTFHLTHDASLSKCLD 191
F+ + + T+ +P T ++S + S S+P T + +++
Sbjct: 1319 FQSWPSSKDTMPAPPTTTSAFVELSTTSHGSPSSTPTTHFSASSTTLGRSEESTTVHSSP 1378
Query: 192 VGDSSQIHPYQLPSDVGLENYDSCYSQTLSLHGSLGKRPQRSKNYQEYSIKPSNDIKTTA 251
V ++ P + + GL + Y H S G ++ ++ E S ++
Sbjct: 1379 VATATTPSPARSTTS-GLVEESTAY------HSSPGST--QTMHFPESSTASGRSEESRT 1429
Query: 252 SHSCGDLLTSLSNPDSSTGRLLKLSSDLY------ATTHFNSDPAVLVNVEQQLSTSLDD 305
SHS ++S+P S+T L++ + + ATTHF E+ ++
Sbjct: 1430 SHS--STTHTISSPPSTTSALVEEPTSYHSSPGSIATTHFPESSTTSGRSEESTASHSSP 1487
Query: 306 LTPAHGSVPNNAVLGNRTTPLRTLLLSPGTSE 337
T +P + R T +SPG+ E
Sbjct: 1488 DTNGITPLPAHFTTSGRIAESTTFYISPGSME 1519
Score = 32.3 bits (72), Expect = 1.4
Identities = 55/248 (22%), Positives = 86/248 (34%), Gaps = 25/248 (10%)
Query: 93 SATQGNGTRDQKLDTFPLGTQTQEVARREMPSDNHQEDEFRHYSPRQSTVRSPEKMTREG 152
S T G P TQT A + F S T SP + T G
Sbjct: 835 STTSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGTKLSPARSTTSG 894
Query: 153 YQVSFLDNKSSGSSPEKELIP-KPDTFHLTHDASLSKCLDVGDSSQIHPYQLPSDVGLEN 211
++ S SS E +P P T L+ ++ + + P S E
Sbjct: 895 LVGESTPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEE 954
Query: 212 YDSCYSQTLSLH----------GSLGKRPQRSKNYQ---EYSIKPSNDI-------KTTA 251
+ +SQ S H L + P S + Q E ++ P + TT
Sbjct: 955 SSTSHSQPGSTHTTAFPDSTTTSDLSQEPTTSHSSQGSTEATLSPGSTTASSLGQQSTTF 1014
Query: 252 SHSCGDLLTSLSNPDSSTGRLLKLSSDLYATT---HFNSDPAVLVNVE-QQLSTSLDDLT 307
S GD T+L D+ T L++ S+ +++T H PA + Q+ ST+
Sbjct: 1015 HSSPGDTETTLLPDDTITSGLVEASTPTHSSTGSLHTTLTPASSTSAGLQEESTTFQSWP 1074
Query: 308 PAHGSVPN 315
+ + P+
Sbjct: 1075 SSSDTTPS 1082
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 33.5 bits (75), Expect = 0.61
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 20/113 (17%)
Query: 457 EDTMKAFCRRELELKEAAQLVPNDMESLKQKLVRVLEENLILSEKIQQLEEGAAISIVSG 516
E+ ++A L++KE V ++E +++K ++LEE IL+E++Q E
Sbjct: 851 EEELQAKDEELLKVKEKQTKVEGELEEMERKHQQLLEEKNILAEQLQAETE--------- 901
Query: 517 QQSHTYDDLLHKNQQLTMQVACLNQELAQ-LKKLEKTVAILHESQRSLVVTNE 568
L + +++ ++A QEL + L LE V E +R+ ++ NE
Sbjct: 902 --------LFAEAEEMRARLAAKKQELEEILHDLESRVE--EEEERNQILQNE 944
>gi|4503179 oral-facial-digital syndrome 1 [Homo sapiens]
Length = 1012
Score = 33.5 bits (75), Expect = 0.61
Identities = 27/122 (22%), Positives = 61/122 (50%), Gaps = 14/122 (11%)
Query: 455 HPEDTMKAFCRRELELKEAAQLVPN---DMESLKQKLVRVLEENLILSEKIQQL------ 505
H ++ + A ++ EL ++ V ++ES+K + + + ++N +L+EK++++
Sbjct: 381 HLQEELIAINSKKEELNQSVNRVKELELELESVKAQSLAITKQNHMLNEKVKEMSDYSLL 440
Query: 506 -EEGAAISIVSGQQSHTYDDLLHKNQQLTMQVACLNQELA----QLKKLEKTVAILHESQ 560
EE + + ++ ++N +L ++A ELA +L+K EK + + HE
Sbjct: 441 KEEKLELLAQNKLLKQQLEESRNENLRLLNRLAQPAPELAVFQKELRKAEKAIVVEHEEF 500
Query: 561 RS 562
S
Sbjct: 501 ES 502
>gi|115647981 glutamine and serine rich 1 [Homo sapiens]
Length = 1735
Score = 33.5 bits (75), Expect = 0.61
Identities = 42/180 (23%), Positives = 68/180 (37%), Gaps = 34/180 (18%)
Query: 129 EDEFRHYSPRQSTVRSPEKMTREGYQV------------SFLDNKSSGSSPEKEL-IPKP 175
E++ +YS Q V S +T E Y S+ S G SP + +
Sbjct: 388 ENQTLNYSSNQQEVLS--SVTNENYPAQTRDLSSVSQSQSYSSGHSQGLSPVSQTQVSYS 445
Query: 176 DTFHLTHDASLSKCLDVGDS-----------SQIHPYQLPSDVGLENYDSCYSQTLSLHG 224
+ SLS+ G+S S LP +NY +S+H
Sbjct: 446 SQSQVLSVVSLSESYASGESLTLTAPSLSYSSASRAQNLPDSSPTQNY-------ISMHS 498
Query: 225 SLGKRPQRSKNYQEYSIKPSNDIKTTASHS-CGDLLTSLSNPDSSTGRLLKLSSDLYATT 283
S + Q S + Q P+ + AS + C L ++++PD + KL SD+Y ++
Sbjct: 499 SQNVQTQESSSPQSQKFLPAVQSSSFASSTHCQTLQNNITSPDPKSYAERKLDSDVYPSS 558
>gi|38570058 hypothetical protein LOC80129 [Homo sapiens]
Length = 715
Score = 33.1 bits (74), Expect = 0.80
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 468 LELKEAAQLVPNDMESLKQKLVRVLEENLILSEKIQQLEE-GAAISIVSGQQSHTYDDLL 526
L + + Q + +MES K+ R L +++Q+LEE AA+S + T +
Sbjct: 71 LSKEVSCQELKAEMESYKENNARKSSLLTSLRDRVQELEEESAALSTSKIRTEITAHAAI 130
Query: 527 HKNQQLTMQVACLNQELAQLKK 548
+NQ+L +V LN++L + K
Sbjct: 131 KENQELKKKVVELNEKLQKCSK 152
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 33.1 bits (74), Expect = 0.80
Identities = 55/248 (22%), Positives = 86/248 (34%), Gaps = 25/248 (10%)
Query: 93 SATQGNGTRDQKLDTFPLGTQTQEVARREMPSDNHQEDEFRHYSPRQSTVRSPEKMTREG 152
S T G P TQT A + F S T SP + T G
Sbjct: 2905 STTSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGTTLSPARSTTSG 2964
Query: 153 YQVSFLDNKSSGSSPEKELIP-KPDTFHLTHDASLSKCLDVGDSSQIHPYQLPSDVGLEN 211
++ S SS E +P P T L+ ++ + + P S E
Sbjct: 2965 LVGESTPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEE 3024
Query: 212 YDSCYSQTLSLH----------GSLGKRPQRSKNYQ---EYSIKPSNDI-------KTTA 251
+ +SQ S H L + P S + Q E ++ P + TT
Sbjct: 3025 SSTSHSQPGSTHTTAFPDSTTTSGLSQEPTASHSSQGSTEATLSPGSTTASSLGQQSTTF 3084
Query: 252 SHSCGDLLTSLSNPDSSTGRLLKLSSDLYATT---HFNSDPAVLVNVE-QQLSTSLDDLT 307
S GD T+L D+ T L++ S+ +++T H PA + Q+ ST+
Sbjct: 3085 HSSPGDTETTLLPDDTITSGLVEASTPTHSSTGSLHTTLTPASSTSAGLQEESTTFQSWP 3144
Query: 308 PAHGSVPN 315
+ + P+
Sbjct: 3145 SSSDTTPS 3152
Score = 32.7 bits (73), Expect = 1.0
Identities = 56/249 (22%), Positives = 86/249 (34%), Gaps = 30/249 (12%)
Query: 93 SATQGNGTRDQKLDTFPLGTQTQEVARREMPSDNHQEDEFRHYSPRQSTVRSPEKMTREG 152
S T G P TQT A + F S T SP + T G
Sbjct: 3988 STTSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGTKLSPARSTTSG 4047
Query: 153 YQVSFLDNKSSGSSPEKELIP-KPDTFHLTHDASLSKCLDVGDSSQIHPYQLPSDVGLEN 211
++ S SS E +P P T L+ ++ + + P S E
Sbjct: 4048 LVGESTPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEE 4107
Query: 212 YDSCYSQTLSLH----------GSLGKRPQRSKNYQ---EYSIKPSNDI-------KTTA 251
+ +SQ S H L + P S + Q E ++ P + TT
Sbjct: 4108 SSTSHSQPGSTHTTAFPDSTTTSGLSQEPTTSHSSQGSTEATLSPGSTTASSLGQQSTTF 4167
Query: 252 SHSCGDLLTSLSNPDSSTGRLLKLSSDLYATT---HFNSDPAVLVNVEQQLSTSLDDLTP 308
S GD T+L D+ T L++ S+ +++T H PA ST L + +
Sbjct: 4168 HSSPGDTETTLLPDDTITSGLVEASTPTHSSTGSLHTTLTPA------SSTSTGLQEEST 4221
Query: 309 AHGSVPNNA 317
S P+++
Sbjct: 4222 TFQSWPSSS 4230
Score = 32.3 bits (72), Expect = 1.4
Identities = 55/248 (22%), Positives = 86/248 (34%), Gaps = 25/248 (10%)
Query: 93 SATQGNGTRDQKLDTFPLGTQTQEVARREMPSDNHQEDEFRHYSPRQSTVRSPEKMTREG 152
S T G P TQT A + F S T SP + T G
Sbjct: 1348 STTSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGTKLSPARSTTSG 1407
Query: 153 YQVSFLDNKSSGSSPEKELIP-KPDTFHLTHDASLSKCLDVGDSSQIHPYQLPSDVGLEN 211
++ S SS E +P P T L+ ++ + + P S E
Sbjct: 1408 LVGESTPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEE 1467
Query: 212 YDSCYSQTLSLH----------GSLGKRPQRSKNYQ---EYSIKPSNDI-------KTTA 251
+ +SQ S H L + P S + Q E ++ P + TT
Sbjct: 1468 SSTSHSQPGSTHTTAFPDSTTTSDLSQEPTTSHSSQGSTEATLSPGSTTASSLGQQSTTF 1527
Query: 252 SHSCGDLLTSLSNPDSSTGRLLKLSSDLYATT---HFNSDPAVLVNVE-QQLSTSLDDLT 307
S GD T+L D+ T L++ S+ +++T H PA + Q+ ST+
Sbjct: 1528 HSSPGDTETTLLPDDTITSGLVEASTPTHSSTGSLHTTLTPASSTSAGLQEESTTFQSWP 1587
Query: 308 PAHGSVPN 315
+ + P+
Sbjct: 1588 SSSDTTPS 1595
Score = 30.8 bits (68), Expect = 4.0
Identities = 36/138 (26%), Positives = 47/138 (34%), Gaps = 13/138 (9%)
Query: 43 SREKTMKNCVTGESSASKVSANVDSRIEMDSNKGLFIPFPNREIKDSLSTSATQGNGTRD 102
S ++T+ T S S+ S SR I FP+ +S +T +
Sbjct: 289 SPDRTLSPARTTSSGVSEKSTTSHSRPGPTHT----IAFPDSTTMPGVSQESTASHSIPG 344
Query: 103 QKLDTFPLGTQTQEVARREMPSDNHQEDEFRHYSPRQS-TVRSPEKMTREGYQVSFLDNK 161
T GT T PS E H SP + T R P+ T G +
Sbjct: 345 STDTTLSPGTTT--------PSSLGPESTTFHSSPGYTKTTRLPDNTTTSGLLEASTPVH 396
Query: 162 SSGSSPEKELIPKPDTFH 179
SS SP L P T H
Sbjct: 397 SSTGSPHTTLSPSSSTTH 414
Score = 30.8 bits (68), Expect = 4.0
Identities = 63/305 (20%), Positives = 102/305 (33%), Gaps = 37/305 (12%)
Query: 54 GESSASKVSANVDSRIEMDSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQ 113
GE S + S+ + S + P ST+ T FP +
Sbjct: 4577 GEESTTSHSSTTHTISSAPSTTSALVEEPTSYHSSPGSTATTH-----------FPDSST 4625
Query: 114 TQEVARREMPSDNHQEDEFRHYSPRQST--VRSPEKMTREGYQVSFLDNKSSGSSPEKEL 171
T + S + Q+ P +ST V E T S GS+ L
Sbjct: 4626 TSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETTALPGSTTTPGL 4685
Query: 172 IPKPDTFH-------LTHDASLSKCLDVGD------SSQIHPYQLPSDVGLENYDSCYSQ 218
K TFH TH ++ S L + SS + PS +
Sbjct: 4686 SEKSTTFHSSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPSPAR-STTSGLVEE 4744
Query: 219 TLSLHGSLGKRPQRSKNYQEYSIKPSNDIKTTASHSCGDLLTSLSNPDSSTGRLLKLSSD 278
+ + H S G ++ ++ E S ++ SHS ++S+P S+T L++ +
Sbjct: 4745 STAYHSSPGST--QTMHFPESSTASGRSEESRTSHS--STTHTISSPPSTTSALVEEPTS 4800
Query: 279 LY------ATTHFNSDPAVLVNVEQQLSTSLDDLTPAHGSVPNNAVLGNRTTPLRTLLLS 332
+ ATTHF E+ ++ T +P + R T +S
Sbjct: 4801 YHSSPGSIATTHFPESSTTSGRSEESTASHSSPDTNGITPLPAHFTTSGRIAESTTFYIS 4860
Query: 333 PGTSE 337
PG+ E
Sbjct: 4861 PGSME 4865
>gi|110347443 TATA element modulatory factor 1 [Homo sapiens]
Length = 1093
Score = 33.1 bits (74), Expect = 0.80
Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 19/142 (13%)
Query: 445 PAPSQPRCCSHPEDTMKA--FCRRELELKEA--------AQLVPNDMESLKQKLVRVLEE 494
PA SQP S ED K F +LE +EA L+ ++LK ++ RV EE
Sbjct: 433 PAESQPEALSEKEDVCKTVEFLNEKLEKREAQLLSLSKEKALLEEAFDNLKDEMFRVKEE 492
Query: 495 NLILSEKIQQLEEGAAISIVSGQQSHTYDDLLHKNQQLTMQVACLNQELAQLKKLEKTVA 554
+ +S + + A + Q + D K ++ + +ELA +T
Sbjct: 493 SSSISSLKDEFTQRIAEAEKKVQLACKERDAAKK------EIKNIKEELATRLNSSETAD 546
Query: 555 ILHESQ---RSLVVTNEYLLQQ 573
+L E R L+ E L +Q
Sbjct: 547 LLKEKDEQIRGLMEEGEKLSKQ 568
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 33.1 bits (74), Expect = 0.80
Identities = 24/114 (21%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Query: 457 EDTMKAFCRRELELKEAAQLVPNDMESLKQKLVRVLEENLILSEKIQQLEEGAAISIVSG 516
E + C R E++E + ++ +Q+L+ V EE + +KI ++E +
Sbjct: 1112 EGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIEN------LKN 1165
Query: 517 QQSHTYDDLLHKNQQLTMQVACLNQELAQLKKLEKTVAILHESQRSLVVTNEYL 570
+ + L H + LN+ ++K + K +L E Q+S ++L
Sbjct: 1166 ELKNKELTLEHMETERLELAQKLNENYEEVKSITKERKVLKELQKSFETERDHL 1219
>gi|14249254 EF-hand calcium binding domain 4B isoform c [Homo
sapiens]
Length = 395
Score = 33.1 bits (74), Expect = 0.80
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 26/143 (18%)
Query: 449 QPRCCSHPEDTMKAFCRRELELKEAAQLVPNDME-SLKQKLVRVLEENLILSEKIQQLEE 507
+P S+ ED F R + + A N++E +LK+K+ EE IQ L E
Sbjct: 190 EPHLLSNFED----FLTRIISQLQEAHEEKNELECALKRKIAAYDEE-------IQHLYE 238
Query: 508 GAAISIVSGQQSHTYDDLLH---KNQQLTMQVACLNQELAQL----KKLEKTVAILHESQ 560
I S ++ D ++Q+L ++ C QEL QL K+LE LH +
Sbjct: 239 EMEQQIKSEKEQFLLKDTERFQARSQELEQKLLCKEQELEQLTQKQKRLEGQCTALHHDK 298
Query: 561 R-------SLVVTNEYLLQQLNK 576
L +TN+ L ++L +
Sbjct: 299 HETKAENTKLKLTNQELARELER 321
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.128 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,168,375
Number of Sequences: 37866
Number of extensions: 1173602
Number of successful extensions: 3277
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 99
Number of HSP's that attempted gapping in prelim test: 3176
Number of HSP's gapped (non-prelim): 208
length of query: 633
length of database: 18,247,518
effective HSP length: 108
effective length of query: 525
effective length of database: 14,157,990
effective search space: 7432944750
effective search space used: 7432944750
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.