Search of human proteins with 239735594

Search of human proteins with 239735594

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239735594 transmembrane protein 171 isoform 2 [Homo sapiens]
         (323 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239735594 transmembrane protein 171 isoform 2 [Homo sapiens]       659   0.0  
gi|239735596 transmembrane protein 171 isoform 1 [Homo sapiens]       654   0.0  
gi|27477109 itchy homolog E3 ubiquitin protein ligase [Homo sapi...    36   0.053
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho...    36   0.053
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]    35   0.090
gi|116235472 SH3-domain GRB2-like (endophilin) interacting prote...    34   0.15 
gi|239743666 PREDICTED: hypothetical protein XP_002342940 isofor...    34   0.20 
gi|239743664 PREDICTED: hypothetical protein XP_002342939 isofor...    34   0.20 
gi|167466201 WAS protein family homolog 1 [Homo sapiens]               34   0.20 
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]           34   0.20 
gi|239757043 PREDICTED: functional smad suppressing element 18 [...    33   0.34 
gi|239751555 PREDICTED: functional smad suppressing element 18 [...    33   0.34 
gi|239746067 PREDICTED: functional smad suppressing element 18 [...    33   0.34 
gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo ...    33   0.34 
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho...    33   0.34 
gi|8567418 ubiquilin 3 [Homo sapiens]                                  33   0.34 
gi|56606125 hypothetical protein LOC201725 [Homo sapiens]              33   0.34 
gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens]          33   0.34 
gi|33946327 nucleoporin 214kDa [Homo sapiens]                          33   0.45 
gi|239753407 PREDICTED: hypothetical protein [Homo sapiens]            33   0.45 
gi|14251215 Kruppel-like factor 5 [Homo sapiens]                       33   0.45 
gi|15529996 son of sevenless homolog 1 [Homo sapiens]                  32   0.58 
gi|209969757 early growth response 2 protein isoform b [Homo sap...    32   0.58 
gi|209969755 early growth response 2 protein isoform a [Homo sap...    32   0.58 
gi|209969753 early growth response 2 protein isoform a [Homo sap...    32   0.58 
gi|9845524 early growth response 2 protein isoform a [Homo sapiens]    32   0.58 
gi|21071058 SWI/SNF-related matrix-associated actin-dependent re...    32   0.58 
gi|239757277 PREDICTED: hypothetical protein [Homo sapiens]            32   0.58 
gi|239751780 PREDICTED: hypothetical protein [Homo sapiens]            32   0.58 
gi|239746275 PREDICTED: hypothetical protein XP_002343721 [Homo ...    32   0.58 

>gi|239735594 transmembrane protein 171 isoform 2 [Homo sapiens]
          Length = 323

 Score =  659 bits (1699), Expect = 0.0
 Identities = 323/323 (100%), Positives = 323/323 (100%)

Query: 1   MSPAAAAEPDGDQQDRHVSKLIFCFFVFGAVLLCVGVLLSIFGFQACQYKPLPDCPMVLK 60
           MSPAAAAEPDGDQQDRHVSKLIFCFFVFGAVLLCVGVLLSIFGFQACQYKPLPDCPMVLK
Sbjct: 1   MSPAAAAEPDGDQQDRHVSKLIFCFFVFGAVLLCVGVLLSIFGFQACQYKPLPDCPMVLK 60

Query: 61  VAGPACAVVGLGAVILARSRAQLQLRAGLQRGQQMDPDRAFICGESRQFAQCLIFGFLFL 120
           VAGPACAVVGLGAVILARSRAQLQLRAGLQRGQQMDPDRAFICGESRQFAQCLIFGFLFL
Sbjct: 61  VAGPACAVVGLGAVILARSRAQLQLRAGLQRGQQMDPDRAFICGESRQFAQCLIFGFLFL 120

Query: 121 TSGMLISVLGIWVPGCGSNWAQEPLNETDTGDSEPRMCGFLSLQIMGPLIVLVGLCFFVV 180
           TSGMLISVLGIWVPGCGSNWAQEPLNETDTGDSEPRMCGFLSLQIMGPLIVLVGLCFFVV
Sbjct: 121 TSGMLISVLGIWVPGCGSNWAQEPLNETDTGDSEPRMCGFLSLQIMGPLIVLVGLCFFVV 180

Query: 181 AHVKKRNTLNAGQDASEREEGQIQIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESP 240
           AHVKKRNTLNAGQDASEREEGQIQIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESP
Sbjct: 181 AHVKKRNTLNAGQDASEREEGQIQIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESP 240

Query: 241 GTNSLLPNENPPSYYSIFNYGTPTSEGAASERDCESIYTISGTNSSSEASHTPHLPSELP 300
           GTNSLLPNENPPSYYSIFNYGTPTSEGAASERDCESIYTISGTNSSSEASHTPHLPSELP
Sbjct: 241 GTNSLLPNENPPSYYSIFNYGTPTSEGAASERDCESIYTISGTNSSSEASHTPHLPSELP 300

Query: 301 PRYEEKENAAATFLPLSSEPSPP 323
           PRYEEKENAAATFLPLSSEPSPP
Sbjct: 301 PRYEEKENAAATFLPLSSEPSPP 323


>gi|239735596 transmembrane protein 171 isoform 1 [Homo sapiens]
          Length = 324

 Score =  654 bits (1687), Expect = 0.0
 Identities = 323/324 (99%), Positives = 323/324 (99%), Gaps = 1/324 (0%)

Query: 1   MSPAAAAEPDGDQQDRHVSKLIFCFFVFGAVLLCVGVLLSIFGFQACQYKPLPDCPMVLK 60
           MSPAAAAEPDGDQQDRHVSKLIFCFFVFGAVLLCVGVLLSIFGFQACQYKPLPDCPMVLK
Sbjct: 1   MSPAAAAEPDGDQQDRHVSKLIFCFFVFGAVLLCVGVLLSIFGFQACQYKPLPDCPMVLK 60

Query: 61  VAGPACAVVGLGAVILARSRAQLQLRAGLQRGQQMDPDRAFICGESRQFAQCLIFGFLFL 120
           VAGPACAVVGLGAVILARSRAQLQLRAGLQRGQQMDPDRAFICGESRQFAQCLIFGFLFL
Sbjct: 61  VAGPACAVVGLGAVILARSRAQLQLRAGLQRGQQMDPDRAFICGESRQFAQCLIFGFLFL 120

Query: 121 TSGMLISVLGIWVPGCGSNWAQEPLNETDTGDSEPRMCGFLSLQIMGPLIVLVGLCFFVV 180
           TSGMLISVLGIWVPGCGSNWAQEPLNETDTGDSEPRMCGFLSLQIMGPLIVLVGLCFFVV
Sbjct: 121 TSGMLISVLGIWVPGCGSNWAQEPLNETDTGDSEPRMCGFLSLQIMGPLIVLVGLCFFVV 180

Query: 181 AHVKKRNTLNAGQDASEREEGQIQIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESP 240
           AHVKKRNTLNAGQDASEREEGQIQIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESP
Sbjct: 181 AHVKKRNTLNAGQDASEREEGQIQIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESP 240

Query: 241 GTNSLLPNENPPSYYSIFNYG-TPTSEGAASERDCESIYTISGTNSSSEASHTPHLPSEL 299
           GTNSLLPNENPPSYYSIFNYG TPTSEGAASERDCESIYTISGTNSSSEASHTPHLPSEL
Sbjct: 241 GTNSLLPNENPPSYYSIFNYGRTPTSEGAASERDCESIYTISGTNSSSEASHTPHLPSEL 300

Query: 300 PPRYEEKENAAATFLPLSSEPSPP 323
           PPRYEEKENAAATFLPLSSEPSPP
Sbjct: 301 PPRYEEKENAAATFLPLSSEPSPP 324


>gi|27477109 itchy homolog E3 ubiquitin protein ligase [Homo
           sapiens]
          Length = 862

 Score = 35.8 bits (81), Expect = 0.053
 Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 15/89 (16%)

Query: 221 PPPPPPYFPES---SASAVAESPGTNSLLPNENPPSYYSIFNYGTPTSEGAASERDCESI 277
           PPPP P  P S   S SA +ES G+++      PP+     N  T TSEGA S      I
Sbjct: 218 PPPPTPRRPASVNGSPSATSESDGSST---GSLPPT-----NTNTNTSEGATS----GLI 265

Query: 278 YTISGTNSSSEASHTPHLPSELPPRYEEK 306
             ++ +  S      P   + LPP +E++
Sbjct: 266 IPLTISGGSGPRPLNPVTQAPLPPGWEQR 294


>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
            sapiens]
          Length = 3549

 Score = 35.8 bits (81), Expect = 0.053
 Identities = 42/139 (30%), Positives = 54/139 (38%), Gaps = 23/139 (16%)

Query: 185  KRNTLNAGQDASEREEGQIQIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESPGTNS 244
            K NT    + A ER    I      +  V +S    PPP PP  P S+AS+  E P    
Sbjct: 2256 KTNTSTGLKMAMERSLNPINFNP--ENNVKESECPLPPPSPPPPPPSNASSEIEFP---- 2309

Query: 245  LLPNENPPSYYSIFNYGTPTSEGAASERDCESIYTISGTNSSSEASHTPHLPSELPPRYE 304
             LP   PP    +F    P   G       E I         +E    P LP   PP  E
Sbjct: 2310 -LP---PPPPLMMF----PEKNGFLPSLSTEKI--------KAEFESFPGLPLPPPPVDE 2353

Query: 305  EKE-NAAATFLPLSSEPSP 322
            + E  +++ FLP    P+P
Sbjct: 2354 KSERESSSMFLPPPPPPTP 2372


>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
          Length = 987

 Score = 35.0 bits (79), Expect = 0.090
 Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 10/98 (10%)

Query: 204 QIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESPGTNSLLPNENPPSYYSIFNYGTP 263
           Q +E       +SV   PP   P F  +  +A   SP T+ L P+ N P   S+    TP
Sbjct: 284 QALEDKSDAASNSVTETPPTTQPSFTFTLPAAATASPPTSLLAPSTN-PLLESLKKMQTP 342

Query: 264 TSEGAASERDCESIYTISGTNSSSEASHTPHLPSELPP 301
            S     E         S   +++EA   P  PS LPP
Sbjct: 343 PSLPPCPE---------SAGAATTEALSPPKTPSLLPP 371


>gi|116235472 SH3-domain GRB2-like (endophilin) interacting protein
           1 [Homo sapiens]
          Length = 828

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 222 PPPPPYFPESSASAVAESPGTNSLLPNENPPSYYSIFNYGTPTSEGAASERDCESIYTIS 281
           PPPPP  P S        PG   +    +PP + S       +    A     ES  +IS
Sbjct: 458 PPPPPPRPPSRPKLPPGKPGVGDVSRPFSPPIHSS-------SPPPIAPLARAESTSSIS 510

Query: 282 GTNSSSEASHTPHLPSELPPR-YEEKENAAATFLPLSSEPSP 322
            TNS S A+ TP + +E P   + ++     TF   S  PSP
Sbjct: 511 STNSLSAAT-TPTVENEQPSLVWFDRGKFYLTFEGSSRGPSP 551



 Score = 28.9 bits (63), Expect = 6.5
 Identities = 32/120 (26%), Positives = 39/120 (32%), Gaps = 22/120 (18%)

Query: 205 IMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESPGTNSLLPNENPPSYYSIFNYGTPT 264
           I  P    +G      PPPPP Y        V  SPG     P   P         G  T
Sbjct: 397 ISSPKDFGLGQRATPPPPPPPTY------RTVVSSPG-----PGSGP---------GPGT 436

Query: 265 SEGAAS-ERDCESIYTISGTNSSSEASHTPHLPSELPPRYEEKENAAATFLPLSSEPSPP 323
           + GA+S  R    +     T         P  P +LPP      + +  F P     SPP
Sbjct: 437 TSGASSPARPATPLVPCRSTTPPPPPPRPPSRP-KLPPGKPGVGDVSRPFSPPIHSSSPP 495


>gi|239743666 PREDICTED: hypothetical protein XP_002342940 isoform 2
           [Homo sapiens]
          Length = 465

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)

Query: 204 QIMEPVQVTVGDSVIIFP--PPPPPYFPESSASAVAESPGT 242
           ++ EP++V + D V+  P  PPPPP  PE  ASA    P T
Sbjct: 287 EVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPST 327


>gi|239743664 PREDICTED: hypothetical protein XP_002342939 isoform 1
           [Homo sapiens]
          Length = 482

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)

Query: 204 QIMEPVQVTVGDSVIIFP--PPPPPYFPESSASAVAESPGT 242
           ++ EP++V + D V+  P  PPPPP  PE  ASA    P T
Sbjct: 304 EVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPST 344


>gi|167466201 WAS protein family homolog 1 [Homo sapiens]
          Length = 465

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)

Query: 204 QIMEPVQVTVGDSVIIFP--PPPPPYFPESSASAVAESPGT 242
           ++ EP++V + D V+  P  PPPPP  PE  ASA    P T
Sbjct: 287 EVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPST 327


>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
          Length = 984

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 10/98 (10%)

Query: 204 QIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESPGTNSLLPNENPPSYYSIFNYGTP 263
           Q +E       +SV   PP   P F  +  +A   SP T+ L P+ N P   S+    TP
Sbjct: 284 QALEDKSDAASNSVTETPPITQPSFTFTLPAAAPASPPTSLLAPSTN-PLLESLKKMQTP 342

Query: 264 TSEGAASERDCESIYTISGTNSSSEASHTPHLPSELPP 301
            S     E         S   +++EA   P  PS LPP
Sbjct: 343 PSLPPCPE---------SAGAATTEALSPPKTPSLLPP 371


>gi|239757043 PREDICTED: functional smad suppressing element 18
           [Homo sapiens]
          Length = 996

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 221 PPPPPPYFPESSASAVAESPGTNSLLPN-ENPPSY 254
           PPPPPP  P+ ++   + SPG+    P+ E  PSY
Sbjct: 835 PPPPPPLAPQKASGGGSSSPGSPVHHPSLEEQPSY 869


>gi|239751555 PREDICTED: functional smad suppressing element 18
           [Homo sapiens]
          Length = 1252

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 221 PPPPPPYFPESSASAVAESPGTNSLLPN-ENPPSY 254
           PPPPPP  P+ ++   + SPG+    P+ E  PSY
Sbjct: 835 PPPPPPLAPQKASGGGSSSPGSPVHHPSLEEQPSY 869


>gi|239746067 PREDICTED: functional smad suppressing element 18
           [Homo sapiens]
          Length = 1252

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 221 PPPPPPYFPESSASAVAESPGTNSLLPN-ENPPSY 254
           PPPPPP  P+ ++   + SPG+    P+ E  PSY
Sbjct: 835 PPPPPPLAPQKASGGGSSSPGSPVHHPSLEEQPSY 869


>gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo
           sapiens]
          Length = 834

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 32/120 (26%), Positives = 46/120 (38%), Gaps = 10/120 (8%)

Query: 204 QIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESPGTNSLLPNENPPSYYSIFNYGTP 263
           Q +E       +SV   PP   P F  +  +A   SP T+ L P+ N P   S+    TP
Sbjct: 133 QALEDKSDAASNSVTETPPITQPSFTFTLPAAAPASPPTSLLAPSTN-PLLESLKKMQTP 191

Query: 264 TSEGAASERDCESIYTISGTNSSSEASHTPHLPSELPPRYEEKENAAATFLPLSSEPSPP 323
            S     E         S   +++EA   P  P+ LPP    +          S + +PP
Sbjct: 192 PSLPPCPE---------SAGAATTEALSPPKTPNLLPPLGLSQSGPPGLLPSPSFDSNPP 242


>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
           sapiens]
          Length = 1560

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 5/48 (10%)

Query: 221 PPPPPPYFPESS-ASAVAESPGTNSLLPNENPPSYYSIFNYGTPTSEG 267
           P PP P+ P SS +SAVA S  T+S LP   P    S F    P S+G
Sbjct: 872 PLPPAPHLPPSSTSSAVASSSETSSRLPAPTP----SDFQLQFPPSQG 915


>gi|8567418 ubiquilin 3 [Homo sapiens]
          Length = 655

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 13/108 (12%)

Query: 221 PPPPPPYFPESSASAVAESPGTNSLLPNEN-----PPSYYSIFNYGTPTSEGAASERDCE 275
           PPP     P SS S+  + PG+   LP E+       S  +   Y T  S G   ++D  
Sbjct: 373 PPPSVNRVPPSSPSS--QEPGSGQPLPEESVAIKGRSSCPAFLRYPTENSTGQGGDQDG- 429

Query: 276 SIYTISGTNSSSEASHTPHLPSELPPRYEEKENAAATFLPLSSEPSPP 323
                +G +S+  +++ P L S L         A  +F P ++ P  P
Sbjct: 430 -----AGKSSTGHSTNLPDLVSGLGDSANRVPFAPLSFSPTAAIPGIP 472


>gi|56606125 hypothetical protein LOC201725 [Homo sapiens]
          Length = 113

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 13/21 (61%), Positives = 15/21 (71%)

Query: 221 PPPPPPYFPESSASAVAESPG 241
           PPPPPP  P SS ++ A SPG
Sbjct: 12  PPPPPPSSPSSSDASAASSPG 32


>gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens]
          Length = 796

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 221 PPPPPPYFPESSASAVAESPGTNSLLPNENPPSYYSIFNYGTPTSEGAASERDCESIYTI 280
           PPPPPP  P S+ +   ES         +N PS  +       T   A S +D  S++  
Sbjct: 597 PPPPPPLGPHSNRTTPPES-------APQNGPSPMAALMSVADTLGTAHSPKDGSSVH-- 647

Query: 281 SGTNSSSEASHTPHLPSELP 300
           S T S+   S +P  P+ +P
Sbjct: 648 STTASARRNSSSPVSPASVP 667


>gi|33946327 nucleoporin 214kDa [Homo sapiens]
          Length = 2090

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 15/121 (12%)

Query: 207 EPVQVTVG-DSVIIFPPPPPPYF---PESSASAVAESPGTNSLLPNENPPSYYSIFNYGT 262
           EP   + G DS    P P P  F   P S AS +A +P  + + P+       + F++G 
Sbjct: 498 EPPSYSSGSDSSKAAPGPGPSTFSFVPPSKAS-LAPTPAASPVAPSA------ASFSFG- 549

Query: 263 PTSEGAASERDCESIYTISGTNSSSEASHTPHLPSELPPRYEEKENAAATFLPLSSEPSP 322
             S G     +   + ++S  N + + S  P   S +     EK  AAAT  P+SS  S 
Sbjct: 550 --SSGFKPTLESTPVPSVSAPNIAMKPSFPPST-SAVKVNLSEKFTAAATSTPVSSSQSA 606

Query: 323 P 323
           P
Sbjct: 607 P 607


>gi|239753407 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 182

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 10/107 (9%)

Query: 222 PPPPPYFPESSASAVAESPGTNSLLPNENPPSYYSIFNYGTPTSEGAASERDCESIYTIS 281
           PPPPP  P SS+S+ +          +   P+  S+   G+      ASER   +     
Sbjct: 41  PPPPPLAPSSSSSSGSSGSSGGGGSGSAGQPTLGSMLAVGSAARR--ASER---AGGRAG 95

Query: 282 GTNSSSEASHTPHLPSELPPRYEEKENAAATFLP-----LSSEPSPP 323
           GT   +     P LP   PP+   K  A+   LP     L + P PP
Sbjct: 96  GTALRAREPPPPLLPPPSPPQPGPKGPASPRPLPSPLPLLETTPFPP 142


>gi|14251215 Kruppel-like factor 5 [Homo sapiens]
          Length = 457

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 6/78 (7%)

Query: 229 PESSASAVAESPGTNSLLPNENPPSYYSIFNYGTPTSEGAASERDCESIYTIS------G 282
           P+++       P     +P++  P   + F    P+SE  + +R  E +  ++       
Sbjct: 271 PQTAVKQFQGMPPCTYTMPSQFLPQQATYFPPSPPSSEPGSPDRQAEMLQNLTPPPSYAA 330

Query: 283 TNSSSEASHTPHLPSELP 300
           T +S  A H P+LP+ LP
Sbjct: 331 TIASKLAIHNPNLPTTLP 348


>gi|15529996 son of sevenless homolog 1 [Homo sapiens]
          Length = 1333

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 14/114 (12%)

Query: 209  VQVTVGDSVIIFPPPPPPYFPESSASAVAESPGTNSLLPNENPPSYYSIFNYGTPTSEGA 268
            + +T G   +  PPP PP     SA A   SP        ++PP+         PTS+ A
Sbjct: 1138 ISLTKGTDEVPVPPPVPPRRRPESAPA-ESSPSKIMSKHLDSPPA----IPPRQPTSK-A 1191

Query: 269  ASERDCESIYTISGTNSSSEASHTPHLPSELPPRYEEKENAAATFLPLSSEPSP 322
             S R     Y+IS   S S+   +P L   LPPR   +     +  PL  +P P
Sbjct: 1192 YSPR-----YSISDRTSISDPPESPPL---LPPREPVRTPDVFSSSPLHLQPPP 1237


>gi|209969757 early growth response 2 protein isoform b [Homo
           sapiens]
          Length = 426

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 221 PPPPPPY-------FPESSASAVAESPGTNSLLPNENPPSYYS 256
           PPPPPPY       + + SA   A +  T+S L    PPSY S
Sbjct: 118 PPPPPPYSGCAGDLYQDPSAFLSAATTSTSSSLAYPPPPSYPS 160


>gi|209969755 early growth response 2 protein isoform a [Homo
           sapiens]
          Length = 476

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 221 PPPPPPY-------FPESSASAVAESPGTNSLLPNENPPSYYS 256
           PPPPPPY       + + SA   A +  T+S L    PPSY S
Sbjct: 168 PPPPPPYSGCAGDLYQDPSAFLSAATTSTSSSLAYPPPPSYPS 210


>gi|209969753 early growth response 2 protein isoform a [Homo
           sapiens]
          Length = 476

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 221 PPPPPPY-------FPESSASAVAESPGTNSLLPNENPPSYYS 256
           PPPPPPY       + + SA   A +  T+S L    PPSY S
Sbjct: 168 PPPPPPYSGCAGDLYQDPSAFLSAATTSTSSSLAYPPPPSYPS 210


>gi|9845524 early growth response 2 protein isoform a [Homo sapiens]
          Length = 476

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 221 PPPPPPY-------FPESSASAVAESPGTNSLLPNENPPSYYS 256
           PPPPPPY       + + SA   A +  T+S L    PPSY S
Sbjct: 168 PPPPPPYSGCAGDLYQDPSAFLSAATTSTSSSLAYPPPPSYPS 210


>gi|21071058 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a5 [Homo sapiens]
          Length = 1052

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 10/86 (11%)

Query: 221 PPPPPPYFPESSASAVAESPGTNSLLPNENPPSYYSIFNYGTPTSEGAASERDCESIYTI 280
           PPPPPP    S  +A   S G+NS   N+  P   +     +  S G A + + E I+  
Sbjct: 8   PPPPPPESAPSKPAASIASGGSNS--SNKGGPEGVAAQAVASAVSAGPA-DAEMEEIFDD 64

Query: 281 SGTNSSSEASHTPHLPSELPPRYEEK 306
           +      E         E  P YEEK
Sbjct: 65  ASPGKQKEI-------QEPDPTYEEK 83


>gi|239757277 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 201

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)

Query: 221 PPPPPPYFPESSASAVAESPGTN--SLLPNENPP 252
           PPPPP   P+++A+AVA S      SLLP+  PP
Sbjct: 129 PPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPP 162


>gi|239751780 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 201

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)

Query: 221 PPPPPPYFPESSASAVAESPGTN--SLLPNENPP 252
           PPPPP   P+++A+AVA S      SLLP+  PP
Sbjct: 129 PPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPP 162


>gi|239746275 PREDICTED: hypothetical protein XP_002343721 [Homo
           sapiens]
          Length = 201

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)

Query: 221 PPPPPPYFPESSASAVAESPGTN--SLLPNENPP 252
           PPPPP   P+++A+AVA S      SLLP+  PP
Sbjct: 129 PPPPPLGPPQATAAAVAPSRARKLPSLLPHRPPP 162


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.136    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,871,963
Number of Sequences: 37866
Number of extensions: 738109
Number of successful extensions: 6229
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 143
Number of HSP's that attempted gapping in prelim test: 5755
Number of HSP's gapped (non-prelim): 483
length of query: 323
length of database: 18,247,518
effective HSP length: 102
effective length of query: 221
effective length of database: 14,385,186
effective search space: 3179126106
effective search space used: 3179126106
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.