TMEM171 16513

Name: TMEM171	Sequence: fasta or formatted (323aa)		NCBI GI: 239735594
Description: transmembrane protein 171 isoform 2		Not currently referenced in the text
Other entries for this name: alt prot {324aa} transmembrane protein 171 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 28 4 C cysteine 3.4 11 1 D aspartate 3.4 11 1 E glutamate 6.5 21 2 F phenylalanine 5.6 18 2 G glycine 8.0 26 1 H histidine 1.2 4 1 I isoleucine 5.0 16 2 K lysine 1.9 6 2 L leucine 9.3 30 2 M methionine 2.2 7 1 N asparagine 3.1 10 1 P proline 9.9 32 6 Q glutamine 5.3 17 2 R arginine 3.7 12 1 S serine 9.6 31 3 T threonine 3.7 12 1 V valine 6.8 22 2 W tryptophan 0.6 2 1 Y tyrosine 2.2 7 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane protein 171 isoform 2 TMEM171 0.992 transmembrane protein 171 isoform 1 ITCH 0.017 itchy homolog E3 ubiquitin protein ligase XIRP2 0.017 xin actin-binding repeat containing 2 isoform 1 [Ho... POM121C 0.016 POM121 membrane glycoprotein (rat)-like SGIP1 0.014 SH3-domain GRB2-like (endophilin) interacting prote... LOC100287171 0.014 PREDICTED: hypothetical protein XP_002342940 isofor... LOC100287171 0.014 PREDICTED: hypothetical protein XP_002342939 isofor... WASH1 0.014 WAS protein family homolog 1 POM121 0.014 nuclear pore membrane protein 121 FUSSEL18 0.013 PREDICTED: functional smad suppressing element 18 [... FUSSEL18 0.013 PREDICTED: functional smad suppressing element 18 [... FUSSEL18 0.013 PREDICTED: functional smad suppressing element 18 [... LOC100288540 0.013 PREDICTED: hypothetical protein XP_002342775 GLTSCR1 0.013 glioma tumor suppressor candidate region gene 1 [Ho... UBQLN3 0.013 ubiquilin 3 C4orf46 0.013 hypothetical protein LOC201725 C14orf4 0.013 chromosome 14 open reading frame 4 NUP214 0.013 nucleoporin 214kDa LOC100293268 0.013 PREDICTED: hypothetical protein KLF5 0.013 Kruppel-like factor 5 SOS1 0.011 son of sevenless homolog 1 EGR2 0.011 early growth response 2 protein isoform b EGR2 0.011 early growth response 2 protein isoform a EGR2 0.011 early growth response 2 protein isoform a EGR2 0.011 early growth response 2 protein isoform a SMARCA5 0.011 SWI/SNF-related matrix-associated actin-dependent re... LOC100293535 0.011 PREDICTED: hypothetical protein LOC100289492 0.011 PREDICTED: hypothetical protein LOC100289492 0.011 PREDICTED: hypothetical protein XP_002343721 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.