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Search of human proteins with 239508816
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239508816 PREDICTED: hypothetical protein LOC442676 [Homo
sapiens]
(679 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169170016 PREDICTED: hypothetical protein LOC442676 [Homo sap... 1454 0.0
gi|239508816 PREDICTED: hypothetical protein LOC442676 [Homo sap... 1454 0.0
gi|169172340 PREDICTED: hypothetical protein LOC442676 [Homo sap... 1453 0.0
gi|169171742 PREDICTED: hypothetical protein LOC442676 [Homo sap... 1449 0.0
gi|239747616 PREDICTED: similar to hCG1996386 [Homo sapiens] 259 4e-69
gi|169162775 PREDICTED: similar to hCG1996386 [Homo sapiens] 259 4e-69
gi|112421108 capicua homolog [Homo sapiens] 249 5e-66
gi|239742769 PREDICTED: hypothetical protein XP_002342619 [Homo ... 214 2e-55
gi|169171432 PREDICTED: similar to hCG2014367 [Homo sapiens] 175 1e-43
gi|169171899 PREDICTED: similar to hCG2014367 [Homo sapiens] 175 1e-43
gi|169171130 PREDICTED: hypothetical protein LOC100130600 [Homo ... 175 1e-43
gi|239509024 PREDICTED: similar to hCG2014367 [Homo sapiens] 175 1e-43
gi|239753062 PREDICTED: hypothetical protein [Homo sapiens] 161 2e-39
gi|239740980 PREDICTED: hypothetical protein XP_002344293 [Homo ... 159 6e-39
gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo ... 51 4e-06
gi|195222732 lymphoid enhancer-binding factor 1 isoform 2 [Homo ... 51 4e-06
gi|23238194 tumor necrosis factor receptor superfamily, member 1... 48 3e-05
gi|11967991 SRY-box 17 [Homo sapiens] 47 4e-05
gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens] 46 1e-04
gi|7705917 lymphoid enhancer-binding factor 1 isoform 1 [Homo sa... 46 1e-04
gi|55750053 atrophin-1 [Homo sapiens] 46 1e-04
gi|55750041 atrophin-1 [Homo sapiens] 46 1e-04
gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens] 45 2e-04
gi|217035121 HMG-BOX transcription factor BBX isoform 1 [Homo sa... 44 6e-04
gi|18378731 HMG-BOX transcription factor BBX isoform 2 [Homo sap... 44 6e-04
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 43 0.001
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 43 0.001
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 43 0.001
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 43 0.001
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 43 0.001
>gi|169170016 PREDICTED: hypothetical protein LOC442676 [Homo
sapiens]
Length = 679
Score = 1454 bits (3765), Expect = 0.0
Identities = 679/679 (100%), Positives = 679/679 (100%)
Query: 1 MKPATGCLLWPVENWVNTRASGATTLKKAGYIFSGRETPSEWHQWRKILRRRRAVIGDAK 60
MKPATGCLLWPVENWVNTRASGATTLKKAGYIFSGRETPSEWHQWRKILRRRRAVIGDAK
Sbjct: 1 MKPATGCLLWPVENWVNTRASGATTLKKAGYIFSGRETPSEWHQWRKILRRRRAVIGDAK 60
Query: 61 ITGEDKAQKRVEPCHSLHLKASHGRELASSMNGVPKKCNCIKHQTSHSELSLCNVMNWGW 120
ITGEDKAQKRVEPCHSLHLKASHGRELASSMNGVPKKCNCIKHQTSHSELSLCNVMNWGW
Sbjct: 61 ITGEDKAQKRVEPCHSLHLKASHGRELASSMNGVPKKCNCIKHQTSHSELSLCNVMNWGW 120
Query: 121 LASNVSGWRAMCHSNPASLVPFSHFANGENKVRAQLALWVLGNDGTLVKGVRLAAMTCKA 180
LASNVSGWRAMCHSNPASLVPFSHFANGENKVRAQLALWVLGNDGTLVKGVRLAAMTCKA
Sbjct: 121 LASNVSGWRAMCHSNPASLVPFSHFANGENKVRAQLALWVLGNDGTLVKGVRLAAMTCKA 180
Query: 181 QGCNMRVDKFGQNGARACVQRGLPWRQHVHVEECGTSLCGCVPLVLCPLPDPSLQPHEAR 240
QGCNMRVDKFGQNGARACVQRGLPWRQHVHVEECGTSLCGCVPLVLCPLPDPSLQPHEAR
Sbjct: 181 QGCNMRVDKFGQNGARACVQRGLPWRQHVHVEECGTSLCGCVPLVLCPLPDPSLQPHEAR 240
Query: 241 QPASHSVASNQSKQPAKLAAVAHERPPGGTGSVDPGRPPGATCPESPGPGTPHTLGVVEP 300
QPASHSVASNQSKQPAKLAAVAHERPPGGTGSVDPGRPPGATCPESPGPGTPHTLGVVEP
Sbjct: 241 QPASHSVASNQSKQPAKLAAVAHERPPGGTGSVDPGRPPGATCPESPGPGTPHTLGVVEP 300
Query: 301 GKSPPPTMEEEPWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGH 360
GKSPPPTMEEEPWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGH
Sbjct: 301 GKSPPPTMEEEPWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGH 360
Query: 361 ELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPK 420
ELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPK
Sbjct: 361 ELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPK 420
Query: 421 EVQLRGQAHKPGASRTVQGLHMASEDTASDEEPMVIHEEEGVTMSLLMMALAPLTLISSS 480
EVQLRGQAHKPGASRTVQGLHMASEDTASDEEPMVIHEEEGVTMSLLMMALAPLTLISSS
Sbjct: 421 EVQLRGQAHKPGASRTVQGLHMASEDTASDEEPMVIHEEEGVTMSLLMMALAPLTLISSS 480
Query: 481 RSHSRPPGPLCTHPPLQGFFCPCPDSQPCGGPDPTSPGSDSDAALDAPPLPLPESHPCLT 540
RSHSRPPGPLCTHPPLQGFFCPCPDSQPCGGPDPTSPGSDSDAALDAPPLPLPESHPCLT
Sbjct: 481 RSHSRPPGPLCTHPPLQGFFCPCPDSQPCGGPDPTSPGSDSDAALDAPPLPLPESHPCLT 540
Query: 541 PPHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQHLGVSITTTGSPAAVPGESWAV 600
PPHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQHLGVSITTTGSPAAVPGESWAV
Sbjct: 541 PPHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQHLGVSITTTGSPAAVPGESWAV 600
Query: 601 SLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGPQGGACGLGGVHVPLLSPEGLD 660
SLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGPQGGACGLGGVHVPLLSPEGLD
Sbjct: 601 SLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGPQGGACGLGGVHVPLLSPEGLD 660
Query: 661 SEQNTLIMGGIFHCAKKLP 679
SEQNTLIMGGIFHCAKKLP
Sbjct: 661 SEQNTLIMGGIFHCAKKLP 679
>gi|239508816 PREDICTED: hypothetical protein LOC442676 [Homo
sapiens]
Length = 679
Score = 1454 bits (3765), Expect = 0.0
Identities = 679/679 (100%), Positives = 679/679 (100%)
Query: 1 MKPATGCLLWPVENWVNTRASGATTLKKAGYIFSGRETPSEWHQWRKILRRRRAVIGDAK 60
MKPATGCLLWPVENWVNTRASGATTLKKAGYIFSGRETPSEWHQWRKILRRRRAVIGDAK
Sbjct: 1 MKPATGCLLWPVENWVNTRASGATTLKKAGYIFSGRETPSEWHQWRKILRRRRAVIGDAK 60
Query: 61 ITGEDKAQKRVEPCHSLHLKASHGRELASSMNGVPKKCNCIKHQTSHSELSLCNVMNWGW 120
ITGEDKAQKRVEPCHSLHLKASHGRELASSMNGVPKKCNCIKHQTSHSELSLCNVMNWGW
Sbjct: 61 ITGEDKAQKRVEPCHSLHLKASHGRELASSMNGVPKKCNCIKHQTSHSELSLCNVMNWGW 120
Query: 121 LASNVSGWRAMCHSNPASLVPFSHFANGENKVRAQLALWVLGNDGTLVKGVRLAAMTCKA 180
LASNVSGWRAMCHSNPASLVPFSHFANGENKVRAQLALWVLGNDGTLVKGVRLAAMTCKA
Sbjct: 121 LASNVSGWRAMCHSNPASLVPFSHFANGENKVRAQLALWVLGNDGTLVKGVRLAAMTCKA 180
Query: 181 QGCNMRVDKFGQNGARACVQRGLPWRQHVHVEECGTSLCGCVPLVLCPLPDPSLQPHEAR 240
QGCNMRVDKFGQNGARACVQRGLPWRQHVHVEECGTSLCGCVPLVLCPLPDPSLQPHEAR
Sbjct: 181 QGCNMRVDKFGQNGARACVQRGLPWRQHVHVEECGTSLCGCVPLVLCPLPDPSLQPHEAR 240
Query: 241 QPASHSVASNQSKQPAKLAAVAHERPPGGTGSVDPGRPPGATCPESPGPGTPHTLGVVEP 300
QPASHSVASNQSKQPAKLAAVAHERPPGGTGSVDPGRPPGATCPESPGPGTPHTLGVVEP
Sbjct: 241 QPASHSVASNQSKQPAKLAAVAHERPPGGTGSVDPGRPPGATCPESPGPGTPHTLGVVEP 300
Query: 301 GKSPPPTMEEEPWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGH 360
GKSPPPTMEEEPWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGH
Sbjct: 301 GKSPPPTMEEEPWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGH 360
Query: 361 ELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPK 420
ELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPK
Sbjct: 361 ELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPK 420
Query: 421 EVQLRGQAHKPGASRTVQGLHMASEDTASDEEPMVIHEEEGVTMSLLMMALAPLTLISSS 480
EVQLRGQAHKPGASRTVQGLHMASEDTASDEEPMVIHEEEGVTMSLLMMALAPLTLISSS
Sbjct: 421 EVQLRGQAHKPGASRTVQGLHMASEDTASDEEPMVIHEEEGVTMSLLMMALAPLTLISSS 480
Query: 481 RSHSRPPGPLCTHPPLQGFFCPCPDSQPCGGPDPTSPGSDSDAALDAPPLPLPESHPCLT 540
RSHSRPPGPLCTHPPLQGFFCPCPDSQPCGGPDPTSPGSDSDAALDAPPLPLPESHPCLT
Sbjct: 481 RSHSRPPGPLCTHPPLQGFFCPCPDSQPCGGPDPTSPGSDSDAALDAPPLPLPESHPCLT 540
Query: 541 PPHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQHLGVSITTTGSPAAVPGESWAV 600
PPHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQHLGVSITTTGSPAAVPGESWAV
Sbjct: 541 PPHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQHLGVSITTTGSPAAVPGESWAV 600
Query: 601 SLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGPQGGACGLGGVHVPLLSPEGLD 660
SLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGPQGGACGLGGVHVPLLSPEGLD
Sbjct: 601 SLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGPQGGACGLGGVHVPLLSPEGLD 660
Query: 661 SEQNTLIMGGIFHCAKKLP 679
SEQNTLIMGGIFHCAKKLP
Sbjct: 661 SEQNTLIMGGIFHCAKKLP 679
>gi|169172340 PREDICTED: hypothetical protein LOC442676 [Homo
sapiens]
Length = 679
Score = 1453 bits (3761), Expect = 0.0
Identities = 678/679 (99%), Positives = 678/679 (99%)
Query: 1 MKPATGCLLWPVENWVNTRASGATTLKKAGYIFSGRETPSEWHQWRKILRRRRAVIGDAK 60
MKPATGCLLWPVENWVNTRASGATTLKKAGYIFSGRETPSEWHQWRKILRRRRAVIGDAK
Sbjct: 1 MKPATGCLLWPVENWVNTRASGATTLKKAGYIFSGRETPSEWHQWRKILRRRRAVIGDAK 60
Query: 61 ITGEDKAQKRVEPCHSLHLKASHGRELASSMNGVPKKCNCIKHQTSHSELSLCNVMNWGW 120
ITGEDKAQKRVEPCHSLHLKASHGRELASSMNGVPKKCNCIKHQTSHSELSLCNVMNWGW
Sbjct: 61 ITGEDKAQKRVEPCHSLHLKASHGRELASSMNGVPKKCNCIKHQTSHSELSLCNVMNWGW 120
Query: 121 LASNVSGWRAMCHSNPASLVPFSHFANGENKVRAQLALWVLGNDGTLVKGVRLAAMTCKA 180
LASNVSGWRAMCHSNPASLVPFSHFANGENKVRAQLALWVLGNDGTLVKGVRLAAMTCKA
Sbjct: 121 LASNVSGWRAMCHSNPASLVPFSHFANGENKVRAQLALWVLGNDGTLVKGVRLAAMTCKA 180
Query: 181 QGCNMRVDKFGQNGARACVQRGLPWRQHVHVEECGTSLCGCVPLVLCPLPDPSLQPHEAR 240
QGCNMRVDKFGQNGARACVQRGLPWRQHVHVEECGTSLCGCVPLVLCPLPDPSLQPHEAR
Sbjct: 181 QGCNMRVDKFGQNGARACVQRGLPWRQHVHVEECGTSLCGCVPLVLCPLPDPSLQPHEAR 240
Query: 241 QPASHSVASNQSKQPAKLAAVAHERPPGGTGSVDPGRPPGATCPESPGPGTPHTLGVVEP 300
QPASHSVASNQSKQPAKLAAVAHERPPGGTGSVDPGRPPGATCPESPGPGTPHTLGVVEP
Sbjct: 241 QPASHSVASNQSKQPAKLAAVAHERPPGGTGSVDPGRPPGATCPESPGPGTPHTLGVVEP 300
Query: 301 GKSPPPTMEEEPWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGH 360
GKSPPPTMEEEPWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGH
Sbjct: 301 GKSPPPTMEEEPWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGH 360
Query: 361 ELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPK 420
ELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPK
Sbjct: 361 ELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPK 420
Query: 421 EVQLRGQAHKPGASRTVQGLHMASEDTASDEEPMVIHEEEGVTMSLLMMALAPLTLISSS 480
EVQLRGQAHKPGASRTVQGLHMASEDTASDEEPMVIHEEEGVTMSLLMMALAPLTLISSS
Sbjct: 421 EVQLRGQAHKPGASRTVQGLHMASEDTASDEEPMVIHEEEGVTMSLLMMALAPLTLISSS 480
Query: 481 RSHSRPPGPLCTHPPLQGFFCPCPDSQPCGGPDPTSPGSDSDAALDAPPLPLPESHPCLT 540
RSHSRPPGPLCTHPPLQGFFCPCPDSQPCGGPDPTSPGSDSDAALDAPPLPLPESHPCLT
Sbjct: 481 RSHSRPPGPLCTHPPLQGFFCPCPDSQPCGGPDPTSPGSDSDAALDAPPLPLPESHPCLT 540
Query: 541 PPHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQHLGVSITTTGSPAAVPGESWAV 600
PPHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQHLGVSITTTGSPAAVPGESWAV
Sbjct: 541 PPHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQHLGVSITTTGSPAAVPGESWAV 600
Query: 601 SLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGPQGGACGLGGVHVPLLSPEGLD 660
SLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGPQGGACGLGGVH PLLSPEGLD
Sbjct: 601 SLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGPQGGACGLGGVHAPLLSPEGLD 660
Query: 661 SEQNTLIMGGIFHCAKKLP 679
SEQNTLIMGGIFHCAKKLP
Sbjct: 661 SEQNTLIMGGIFHCAKKLP 679
>gi|169171742 PREDICTED: hypothetical protein LOC442676 [Homo
sapiens]
Length = 679
Score = 1449 bits (3751), Expect = 0.0
Identities = 676/679 (99%), Positives = 677/679 (99%)
Query: 1 MKPATGCLLWPVENWVNTRASGATTLKKAGYIFSGRETPSEWHQWRKILRRRRAVIGDAK 60
MKPATGCLLWPVENWVNTRASGATTLKKAGYIFSGRETPSEWHQWRKILRRRRAVIGDAK
Sbjct: 1 MKPATGCLLWPVENWVNTRASGATTLKKAGYIFSGRETPSEWHQWRKILRRRRAVIGDAK 60
Query: 61 ITGEDKAQKRVEPCHSLHLKASHGRELASSMNGVPKKCNCIKHQTSHSELSLCNVMNWGW 120
ITGEDKAQKRVEPCHSLHLKASHGRELASSMNGVPKKCNCIKHQTSHSELSLCNVMNWGW
Sbjct: 61 ITGEDKAQKRVEPCHSLHLKASHGRELASSMNGVPKKCNCIKHQTSHSELSLCNVMNWGW 120
Query: 121 LASNVSGWRAMCHSNPASLVPFSHFANGENKVRAQLALWVLGNDGTLVKGVRLAAMTCKA 180
LASNVSGWRAMCHSNPASLVPFSHFANGENKVRAQLALWVLGNDGTLVKGVRLAAMTCKA
Sbjct: 121 LASNVSGWRAMCHSNPASLVPFSHFANGENKVRAQLALWVLGNDGTLVKGVRLAAMTCKA 180
Query: 181 QGCNMRVDKFGQNGARACVQRGLPWRQHVHVEECGTSLCGCVPLVLCPLPDPSLQPHEAR 240
QGCNMRVDKFGQNGARACVQRGLPWRQHVHVEECGTSLCGCVPLVLCPLPDPSLQPHEAR
Sbjct: 181 QGCNMRVDKFGQNGARACVQRGLPWRQHVHVEECGTSLCGCVPLVLCPLPDPSLQPHEAR 240
Query: 241 QPASHSVASNQSKQPAKLAAVAHERPPGGTGSVDPGRPPGATCPESPGPGTPHTLGVVEP 300
QPASHSVASNQSKQPAKLAAVAHERPPGGTGSVDPGRPPGATCPESPGPGTPHTLGVVEP
Sbjct: 241 QPASHSVASNQSKQPAKLAAVAHERPPGGTGSVDPGRPPGATCPESPGPGTPHTLGVVEP 300
Query: 301 GKSPPPTMEEEPWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGH 360
GKSPPPTMEEEPWAP+GSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGH
Sbjct: 301 GKSPPPTMEEEPWAPQGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGH 360
Query: 361 ELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPK 420
ELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHD AFQVKVAHLQQGPK
Sbjct: 361 ELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDQAFQVKVAHLQQGPK 420
Query: 421 EVQLRGQAHKPGASRTVQGLHMASEDTASDEEPMVIHEEEGVTMSLLMMALAPLTLISSS 480
EVQLRGQAHKPGASRTVQGLHMASEDTASDEEPMVIHEEEGVTMSLLMMALAPLTLISSS
Sbjct: 421 EVQLRGQAHKPGASRTVQGLHMASEDTASDEEPMVIHEEEGVTMSLLMMALAPLTLISSS 480
Query: 481 RSHSRPPGPLCTHPPLQGFFCPCPDSQPCGGPDPTSPGSDSDAALDAPPLPLPESHPCLT 540
RSHSRPPGPLCTHPPLQGFFCPCPDSQPCGGPDPTSPGSDSDAALDAPPLPLPESHPCLT
Sbjct: 481 RSHSRPPGPLCTHPPLQGFFCPCPDSQPCGGPDPTSPGSDSDAALDAPPLPLPESHPCLT 540
Query: 541 PPHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQHLGVSITTTGSPAAVPGESWAV 600
PPHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQHLGVSITTTGSPAAVPGESWAV
Sbjct: 541 PPHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQHLGVSITTTGSPAAVPGESWAV 600
Query: 601 SLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGPQGGACGLGGVHVPLLSPEGLD 660
SLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGPQGGACGLGGVH PLLSPEGLD
Sbjct: 601 SLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGPQGGACGLGGVHAPLLSPEGLD 660
Query: 661 SEQNTLIMGGIFHCAKKLP 679
SEQNTLIMGGIFHCAKKLP
Sbjct: 661 SEQNTLIMGGIFHCAKKLP 679
>gi|239747616 PREDICTED: similar to hCG1996386 [Homo sapiens]
Length = 441
Score = 259 bits (663), Expect = 4e-69
Identities = 148/244 (60%), Positives = 157/244 (64%), Gaps = 53/244 (21%)
Query: 298 VEPGKSP----PPTMEEE--PWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDH 351
+ P K P PPT E W AQSLSALRKEQDSSS+KDG SPNKWDKDH
Sbjct: 30 MRPSKLPVTQWPPTRENNLPSWQLLLMSVHQAQSLSALRKEQDSSSEKDGRSPNKWDKDH 89
Query: 352 IRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLAFQVK 411
I WPMSG H LQQAAPG GRAHQGHPNQDN T+SQ+LS++WYTLGPNE QKY DLAFQVK
Sbjct: 90 IWWPMSGSHNLQQAAPGPGRAHQGHPNQDNRTISQMLSEQWYTLGPNEMQKY-DLAFQVK 148
Query: 412 VAHLQQGPKEVQLRGQAHKPGASRTVQ--------------------------------- 438
VAHLQQGPKEVQLRGQAHKPGASR+V
Sbjct: 149 VAHLQQGPKEVQLRGQAHKPGASRSVTRARGSGAYQRWALPLPLGCPLNSCQLQPKHSRA 208
Query: 439 -------------GLHMASEDTASDEEPMVIHEEEGVTMSLLMMALAPLTLISSSRSHSR 485
HMASED ASDEE VIHEEEGV MSLLMMALAPLTLISSSR+ +
Sbjct: 209 RIPRSSFCGAERLHTHMASEDIASDEEHTVIHEEEGVMMSLLMMALAPLTLISSSRTFGK 268
Query: 486 PPGP 489
GP
Sbjct: 269 VYGP 272
>gi|169162775 PREDICTED: similar to hCG1996386 [Homo sapiens]
Length = 441
Score = 259 bits (663), Expect = 4e-69
Identities = 148/244 (60%), Positives = 157/244 (64%), Gaps = 53/244 (21%)
Query: 298 VEPGKSP----PPTMEEE--PWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDH 351
+ P K P PPT E W AQSLSALRKEQDSSS+KDG SPNKWDKDH
Sbjct: 30 MRPSKLPVTQWPPTRENNLPSWQLLLMSVHQAQSLSALRKEQDSSSEKDGRSPNKWDKDH 89
Query: 352 IRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLAFQVK 411
I WPMSG H LQQAAPG GRAHQGHPNQDN T+SQ+LS++WYTLGPNE QKY DLAFQVK
Sbjct: 90 IWWPMSGSHNLQQAAPGPGRAHQGHPNQDNRTISQMLSEQWYTLGPNEMQKY-DLAFQVK 148
Query: 412 VAHLQQGPKEVQLRGQAHKPGASRTVQ--------------------------------- 438
VAHLQQGPKEVQLRGQAHKPGASR+V
Sbjct: 149 VAHLQQGPKEVQLRGQAHKPGASRSVTRARGSGAYQRWALPLPLGCPLNSCQLQPKHSRA 208
Query: 439 -------------GLHMASEDTASDEEPMVIHEEEGVTMSLLMMALAPLTLISSSRSHSR 485
HMASED ASDEE VIHEEEGV MSLLMMALAPLTLISSSR+ +
Sbjct: 209 RIPRSSFCGAERLHTHMASEDIASDEEHTVIHEEEGVMMSLLMMALAPLTLISSSRTFGK 268
Query: 486 PPGP 489
GP
Sbjct: 269 VYGP 272
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 249 bits (637), Expect = 5e-66
Identities = 147/300 (49%), Positives = 172/300 (57%), Gaps = 41/300 (13%)
Query: 222 VPLVLCPLPDPSLQPHEARQPASHSVASNQSKQPAKLAAVAHERPPGGTGSVDPGRPPGA 281
VP + PDPS+QP EA+QPASH VASNQSK+PA+ AAVAHERPPGGTGS DP RPPGA
Sbjct: 41 VPFLAPSQPDPSVQPSEAQQPASHPVASNQSKEPAESAAVAHERPPGGTGSADPERPPGA 100
Query: 282 TCPESPGPGTPHTLGVVEPGKSPPPTMEEEPWAPKGSPCWTA------------------ 323
TCPESPGPG PH LGVVE GK PPPT EEE P G P +
Sbjct: 101 TCPESPGPGPPHPLGVVESGKGPPPTTEEEASGPPGEPRLDSETESDHDDAFLSIMSPEI 160
Query: 324 -----------QSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGHELQQAAPGSGRA 372
QSLSAL KE+DSSS+KDG SPNK +KDHIR PM+ +
Sbjct: 161 QLPLPPGKRRTQSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRH--RALV 218
Query: 373 HQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPKEVQLRGQAHKPG 432
HQ HPNQDN TVS+IL + WY LGP E QKYHDLAFQVK AH + P K
Sbjct: 219 HQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSS 278
Query: 433 ASRTVQGLHMASEDTASDEEPMVIHEEEGVT----MSLLMMALAPLTLISSSRSHSRPPG 488
+ L +A + E M E G +S ++++A TL+SS ++ PG
Sbjct: 279 SEAKPTSLGLAGGHKETRERSM---SETGTAAAPGVSSELLSVAAQTLLSSD---TKAPG 332
Score = 56.6 bits (135), Expect = 7e-08
Identities = 33/82 (40%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Query: 476 LISSSRSHSRPPG---PLCTHPPLQGFFCPCPDSQPCGGPDPTSPGSDSDAALDAPPLPL 532
++ ++ +PPG PL PP P P P GGPDPTSP SDS A APPLP
Sbjct: 1518 IMQAATPTEQPPGAEAPLPVPPPTGTAAAPAPTPSPAGGPDPTSPSSDSGTAQAAPPLPP 1577
Query: 533 P----------ESHPCLTPPHP 544
P E P +PP P
Sbjct: 1578 PPESGPGQPGWEGAPQPSPPPP 1599
Score = 32.3 bits (72), Expect = 1.5
Identities = 31/100 (31%), Positives = 39/100 (39%), Gaps = 19/100 (19%)
Query: 434 SRTVQGLHMASEDTASDEEPMVIHEEEG----------VTMSLLMMALAPLTLISSSRSH 483
+R + ASED SDEE MVI EEEG T + + +T S S
Sbjct: 421 TRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFGTTDIDLKCKERVTDSESGDSS 480
Query: 484 SRPP------GPLCTHPPLQGFFCPCP---DSQPCGGPDP 514
P G P ++ F C D +P G PDP
Sbjct: 481 GEDPEGNKGFGRKVFSPVIRSSFTHCRPPLDPEPPGPPDP 520
Score = 30.0 bits (66), Expect = 7.3
Identities = 30/128 (23%), Positives = 43/128 (33%), Gaps = 16/128 (12%)
Query: 253 KQPAKLAAVAHERPPGGTGSVDPGRPPGATCPESPGPGTPHTLGVVEPGKSPPPTMEEEP 312
K P K+ A P G + GRP P P P G V +P +E +P
Sbjct: 1175 KAPQKVKAAIASIPVGSFEAGASGRP-------GPAPRQPLEPGPVREPTAPESELEGQP 1227
Query: 313 WAPKGSP---CWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGHELQQAAPGS 369
P P WT + S+ + + P ++P S PG
Sbjct: 1228 TPPAPPPLPETWTPTARSSPPLPPPAEERTSAKGPETMAS---KFPSSSS---DWRVPGQ 1281
Query: 370 GRAHQGHP 377
G ++G P
Sbjct: 1282 GLENRGEP 1289
Score = 30.0 bits (66), Expect = 7.3
Identities = 23/80 (28%), Positives = 28/80 (35%), Gaps = 10/80 (12%)
Query: 232 PSLQPHEARQPASHSVASNQSKQPAKLAAVAHERPP------GGTGSVDPGRPPGATCPE 285
P+ QP A P + + PA + A P GT P PP P
Sbjct: 1524 PTEQPPGAEAPLPVPPPTGTAAAPAPTPSPAGGPDPTSPSSDSGTAQAAPPLPP----PP 1579
Query: 286 SPGPGTPHTLGVVEPGKSPP 305
GPG P G +P PP
Sbjct: 1580 ESGPGQPGWEGAPQPSPPPP 1599
>gi|239742769 PREDICTED: hypothetical protein XP_002342619 [Homo
sapiens]
Length = 351
Score = 214 bits (545), Expect = 2e-55
Identities = 139/291 (47%), Positives = 153/291 (52%), Gaps = 44/291 (15%)
Query: 289 PGTPHTLGVVEPGKSPPPTMEEE--PWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNK 346
P HT P PPT E W P AQSLSALRKEQDSSS+KDG SPNK
Sbjct: 25 PPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQAQSLSALRKEQDSSSEKDGRSPNK 84
Query: 347 WDKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDL 406
DKDHIRWPMSG H+LQQAAPG G AHQGHPNQDN TVSQ+LS+RWYTLGPNE QKY +L
Sbjct: 85 SDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNRTVSQMLSERWYTLGPNEMQKY-NL 143
Query: 407 AFQVKVAHLQQGPKEVQLRGQAHKPGASRT----------------VQGLHMASEDTASD 450
AFQVKVAHLQQGPKEVQLRGQAHKPGASR+ QG ++ S
Sbjct: 144 AFQVKVAHLQQGPKEVQLRGQAHKPGASRSSSDTKEQLLWGRTAAHSQGTWLSLAQAFSH 203
Query: 451 EEPMVIHEEEGVTMSLLMMALAPLTLISSSRSHSRPPGPLCTHPPLQGFFCPCPDSQPCG 510
+H +G + AL LT + S + P P H F P
Sbjct: 204 SG---VHSLDG--REIDRQALRELTQVVSGTASYSGPKPSTQHGAPGHFAAP-------- 250
Query: 511 GPDPTSPGSDSDAALDAPPLPLPESH-------PCLTPPHPAQALVQPWLP 554
G D AAL P +P PC P QPW P
Sbjct: 251 -----GEGGDPWAALLPPTVPRSTCSFWQSMVTPCPPPTRTRMLPPQPWHP 296
>gi|169171432 PREDICTED: similar to hCG2014367 [Homo sapiens]
Length = 594
Score = 175 bits (444), Expect = 1e-43
Identities = 89/127 (70%), Positives = 97/127 (76%), Gaps = 5/127 (3%)
Query: 324 QSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWT 383
QSLSALRKEQDSSS+KDG SPNKWDKDHIRWPMSGGH+LQQAAPG GRAHQGHPNQDN T
Sbjct: 80 QSLSALRKEQDSSSEKDGCSPNKWDKDHIRWPMSGGHDLQQAAPGPGRAHQGHPNQDNRT 139
Query: 384 VSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPKEVQLRGQAHKPGASR---TVQGL 440
VSQ+LSKRWYTLGPNETQKYHDLAFQ + + + G A PG S +V
Sbjct: 140 VSQMLSKRWYTLGPNETQKYHDLAFQ--ECNKGSWERRISETGTATAPGVSSELLSVAAQ 197
Query: 441 HMASEDT 447
+ S DT
Sbjct: 198 TLQSSDT 204
Score = 160 bits (405), Expect = 4e-39
Identities = 89/143 (62%), Positives = 93/143 (65%), Gaps = 25/143 (17%)
Query: 522 DAALDAPPLPLPESHPCLTP--PHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQH 579
DAAL APPLPLPESH P +Q ++ W C G +G LP
Sbjct: 453 DAALAAPPLPLPESHAGGQPQRSQDSQYPLRTWTVC-------GGSNGGQDG--YLLP-- 501
Query: 580 LGVSITTTGSPAAVPGESWAVSLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGP 639
AVPGESWAVSLLRAPVHTM CGTFRAFHF ENSSCWGYKMECEEGLGP
Sbjct: 502 ------------AVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGP 549
Query: 640 QGGACGLGGVHVPLLSPEGLDSE 662
QGGACGL GVH PLLSPEGLDSE
Sbjct: 550 QGGACGLRGVHAPLLSPEGLDSE 572
>gi|169171899 PREDICTED: similar to hCG2014367 [Homo sapiens]
Length = 594
Score = 175 bits (444), Expect = 1e-43
Identities = 89/127 (70%), Positives = 97/127 (76%), Gaps = 5/127 (3%)
Query: 324 QSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWT 383
QSLSALRKEQDSSS+KDG SPNKWDKDHIRWPMSGGH+LQQAAPG GRAHQGHPNQDN T
Sbjct: 80 QSLSALRKEQDSSSEKDGCSPNKWDKDHIRWPMSGGHDLQQAAPGPGRAHQGHPNQDNRT 139
Query: 384 VSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPKEVQLRGQAHKPGASR---TVQGL 440
VSQ+LSKRWYTLGPNETQKYHDLAFQ + + + G A PG S +V
Sbjct: 140 VSQMLSKRWYTLGPNETQKYHDLAFQ--ECNKGSWERRISETGTATAPGVSSELLSVAAQ 197
Query: 441 HMASEDT 447
+ S DT
Sbjct: 198 TLQSSDT 204
Score = 163 bits (413), Expect = 4e-40
Identities = 90/143 (62%), Positives = 94/143 (65%), Gaps = 25/143 (17%)
Query: 522 DAALDAPPLPLPESHPCLTP--PHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQH 579
DAAL APPLPLPESH P +Q ++ W C G +G LP
Sbjct: 453 DAALAAPPLPLPESHAGGQPQRSQDSQYPLRTWTVC-------GGSNGGQDG--YLLP-- 501
Query: 580 LGVSITTTGSPAAVPGESWAVSLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGP 639
AVPGESWAVSLLRAPVHTM CGTFRAFHF ENSSCWGYKMECEEGLGP
Sbjct: 502 ------------AVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGP 549
Query: 640 QGGACGLGGVHVPLLSPEGLDSE 662
QGGACGLGGVH PLLSPEGLDSE
Sbjct: 550 QGGACGLGGVHAPLLSPEGLDSE 572
>gi|169171130 PREDICTED: hypothetical protein LOC100130600 [Homo
sapiens]
Length = 594
Score = 175 bits (444), Expect = 1e-43
Identities = 89/127 (70%), Positives = 97/127 (76%), Gaps = 5/127 (3%)
Query: 324 QSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWT 383
QSLSALRKEQDSSS+KDG SPNKWDKDHIRWPMSGGH+LQQAAPG GRAHQGHPNQDN T
Sbjct: 80 QSLSALRKEQDSSSEKDGCSPNKWDKDHIRWPMSGGHDLQQAAPGPGRAHQGHPNQDNRT 139
Query: 384 VSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPKEVQLRGQAHKPGASR---TVQGL 440
VSQ+LSKRWYTLGPNETQKYHDLAFQ + + + G A PG S +V
Sbjct: 140 VSQMLSKRWYTLGPNETQKYHDLAFQ--ECNKGSWERRISETGTATAPGVSSELLSVAAQ 197
Query: 441 HMASEDT 447
+ S DT
Sbjct: 198 TLQSSDT 204
Score = 160 bits (405), Expect = 4e-39
Identities = 89/143 (62%), Positives = 93/143 (65%), Gaps = 25/143 (17%)
Query: 522 DAALDAPPLPLPESHPCLTP--PHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQH 579
DAAL APPLPLPESH P +Q ++ W C G +G LP
Sbjct: 453 DAALAAPPLPLPESHAGGQPQRSQDSQYPLRTWTVC-------GGSNGGQDG--YLLP-- 501
Query: 580 LGVSITTTGSPAAVPGESWAVSLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGP 639
AVPGESWAVSLLRAPVHTM CGTFRAFHF ENSSCWGYKMECEEGLGP
Sbjct: 502 ------------AVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGP 549
Query: 640 QGGACGLGGVHVPLLSPEGLDSE 662
QGGACGL GVH PLLSPEGLDSE
Sbjct: 550 QGGACGLRGVHAPLLSPEGLDSE 572
>gi|239509024 PREDICTED: similar to hCG2014367 [Homo sapiens]
Length = 594
Score = 175 bits (444), Expect = 1e-43
Identities = 89/127 (70%), Positives = 97/127 (76%), Gaps = 5/127 (3%)
Query: 324 QSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWT 383
QSLSALRKEQDSSS+KDG SPNKWDKDHIRWPMSGGH+LQQAAPG GRAHQGHPNQDN T
Sbjct: 80 QSLSALRKEQDSSSEKDGCSPNKWDKDHIRWPMSGGHDLQQAAPGPGRAHQGHPNQDNRT 139
Query: 384 VSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPKEVQLRGQAHKPGASR---TVQGL 440
VSQ+LSKRWYTLGPNETQKYHDLAFQ + + + G A PG S +V
Sbjct: 140 VSQMLSKRWYTLGPNETQKYHDLAFQ--ECNKGSWERRISETGTATAPGVSSELLSVAAQ 197
Query: 441 HMASEDT 447
+ S DT
Sbjct: 198 TLQSSDT 204
Score = 160 bits (405), Expect = 4e-39
Identities = 89/143 (62%), Positives = 93/143 (65%), Gaps = 25/143 (17%)
Query: 522 DAALDAPPLPLPESHPCLTP--PHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQH 579
DAAL APPLPLPESH P +Q ++ W C G +G LP
Sbjct: 453 DAALAAPPLPLPESHAGGQPQRSQDSQYPLRTWTVC-------GGSNGGQDG--YLLP-- 501
Query: 580 LGVSITTTGSPAAVPGESWAVSLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGP 639
AVPGESWAVSLLRAPVHTM CGTFRAFHF ENSSCWGYKMECEEGLGP
Sbjct: 502 ------------AVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGP 549
Query: 640 QGGACGLGGVHVPLLSPEGLDSE 662
QGGACGL GVH PLLSPEGLDSE
Sbjct: 550 QGGACGLRGVHAPLLSPEGLDSE 572
>gi|239753062 PREDICTED: hypothetical protein [Homo sapiens]
Length = 811
Score = 161 bits (408), Expect = 2e-39
Identities = 90/143 (62%), Positives = 92/143 (64%), Gaps = 24/143 (16%)
Query: 522 DAALDAPPLPLPESHPCLTPPHPAQALVQPWLPCHCLCPRVGTLTAWLEG--DTPALPQH 579
DAAL APPLPLPESH P +Q P R T+ G D LP
Sbjct: 669 DAALVAPPLPLPESHAGGRPQRRSQDSQYPL--------RTWTVCGGSNGGQDGYLLP-- 718
Query: 580 LGVSITTTGSPAAVPGESWAVSLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGP 639
AVPGESWAVSLLRAPVHTM CGTFRAFHF ENSSCWGYKMECEEGLGP
Sbjct: 719 ------------AVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGP 766
Query: 640 QGGACGLGGVHVPLLSPEGLDSE 662
QGGACGLGGVH PLLS EGLDSE
Sbjct: 767 QGGACGLGGVHAPLLSSEGLDSE 789
Score = 158 bits (399), Expect = 2e-38
Identities = 93/165 (56%), Positives = 103/165 (62%), Gaps = 26/165 (15%)
Query: 298 VEPGKSP----PPTMEEEPWAPKGSPCWTA------QSLSALRKEQDSSSKKDGHSPNKW 347
+ P K P PPT E P W QSLSALRKEQDSSS+KDG SPNKW
Sbjct: 267 MRPSKLPVTQWPPTRENN------LPSWQLLLMSVHQSLSALRKEQDSSSEKDGRSPNKW 320
Query: 348 DKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLA 407
DKDHI WPMSG H LQQAAPG GRAHQGHPNQDN T+SQ+LS++WYTLGPNE QKY DLA
Sbjct: 321 DKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNRTISQMLSEQWYTLGPNEMQKY-DLA 379
Query: 408 FQVKVAHLQQGPKE--VQLRGQAHKPGASR---TVQGLHMASEDT 447
FQ +G E + G A PG S +V + S DT
Sbjct: 380 FQ----ECNKGSWEWSISEMGTATAPGVSSELLSVAAQTLQSSDT 420
>gi|239740980 PREDICTED: hypothetical protein XP_002344293 [Homo
sapiens]
Length = 616
Score = 159 bits (403), Expect = 6e-39
Identities = 89/143 (62%), Positives = 93/143 (65%), Gaps = 25/143 (17%)
Query: 522 DAALDAPPLPLPESHPCLTP--PHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQH 579
DAAL APPL LPESH P +Q ++ W C G +G LP
Sbjct: 475 DAALAAPPLLLPESHAGGQPQRSQDSQYPLRTWTVC-------GGSNGGQDG--YLLP-- 523
Query: 580 LGVSITTTGSPAAVPGESWAVSLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGP 639
AVPGESWAVSLLRAPVHTM CGTFRAFHF ENSSCWGYKMECEEGLGP
Sbjct: 524 ------------AVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGP 571
Query: 640 QGGACGLGGVHVPLLSPEGLDSE 662
QGGACGLGGVH PLLSPEGLDSE
Sbjct: 572 QGGACGLGGVHAPLLSPEGLDSE 594
Score = 155 bits (393), Expect = 9e-38
Identities = 92/164 (56%), Positives = 103/164 (62%), Gaps = 10/164 (6%)
Query: 289 PGTPHTLGVVEPGKSPPPTMEEEPWAPKGSPCWTA--QSLSALRKEQDSSSKKDGHSPNK 346
P HT P PPT E P P + QSLSALRKEQDSSS+KDG SPNK
Sbjct: 69 PPCSHTRPSNLPVTQWPPTRENN--LPSWQPLLMSVHQSLSALRKEQDSSSEKDGRSPNK 126
Query: 347 WDKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDL 406
DKDHIRWPMSG H+LQQAAPG G AHQGHPNQDN TVSQ+LS+RWYTLGPNE QKY +L
Sbjct: 127 SDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNRTVSQMLSERWYTLGPNEMQKY-NL 185
Query: 407 AFQVKVAHLQQGPKEVQLRGQAHKPGASR---TVQGLHMASEDT 447
AFQ + + + G A PG S +V + S DT
Sbjct: 186 AFQ--ECNKGSWERSISETGTATAPGVSSELLSVAAQTLQSSDT 227
>gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo
sapiens]
Length = 386
Score = 50.8 bits (120), Expect = 4e-06
Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 25/183 (13%)
Query: 244 SHSVASNQSKQ------PAKLAAVAHERPPGGTGSVDPGRPPGATCPES-PGPGTPHTLG 296
SH + SKQ PA + PGG G + P P G PGP PHT G
Sbjct: 172 SHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVGQITP--PLGWFSHHMIPGPPGPHTTG 229
Query: 297 VVEPGKSPPPTMEEEPWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPM 356
+ P P +E P T L ++ + + +++ P HI+ P+
Sbjct: 230 IPHPAIVTPQVKQEHPH--------TDSDLMHVKPQHEQRKEQEPKRP------HIKKPL 275
Query: 357 SGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQ 416
+ + + A +++ ++QIL +RW+ L E KY++LA + + H+Q
Sbjct: 276 NAFMLYMKEMRANVVAEC--TLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQ 333
Query: 417 QGP 419
P
Sbjct: 334 LYP 336
>gi|195222732 lymphoid enhancer-binding factor 1 isoform 2 [Homo
sapiens]
Length = 371
Score = 50.8 bits (120), Expect = 4e-06
Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 25/183 (13%)
Query: 244 SHSVASNQSKQ------PAKLAAVAHERPPGGTGSVDPGRPPGATCPES-PGPGTPHTLG 296
SH + SKQ PA + PGG G + P P G PGP PHT G
Sbjct: 172 SHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVGQITP--PLGWFSHHMIPGPPGPHTTG 229
Query: 297 VVEPGKSPPPTMEEEPWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPM 356
+ P P +E P T L ++ + + +++ P HI+ P+
Sbjct: 230 IPHPAIVTPQVKQEHPH--------TDSDLMHVKPQHEQRKEQEPKRP------HIKKPL 275
Query: 357 SGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQ 416
+ + + A +++ ++QIL +RW+ L E KY++LA + + H+Q
Sbjct: 276 NAFMLYMKEMRANVVAEC--TLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQ 333
Query: 417 QGP 419
P
Sbjct: 334 LYP 336
>gi|23238194 tumor necrosis factor receptor superfamily, member 18
isoform 2 precursor [Homo sapiens]
Length = 255
Score = 47.8 bits (112), Expect = 3e-05
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 240 RQPASHSVASNQSKQPAKLAAVAHERPPGG--TGSVDPGRPPGATCPESPGPGTPHTLGV 297
R+P + AS+ P K A +R GG T +PGRPPG SP PG P G
Sbjct: 140 RRPKTPEAASS----PRKSGASDRQRRRGGWETCGCEPGRPPGPPTAASPSPGAPQAAGA 195
Query: 298 VEPGKSPPPTMEEEPWAPKG------SPCWTAQSLSALRKEQDSSS 337
+ ++ W +G PC +A + R+E+++ S
Sbjct: 196 LRSALGRALLPWQQKWVQEGGSDQRPGPCSSAAAAGPCRRERETQS 241
>gi|11967991 SRY-box 17 [Homo sapiens]
Length = 414
Score = 47.4 bits (111), Expect = 4e-05
Identities = 74/301 (24%), Positives = 109/301 (36%), Gaps = 39/301 (12%)
Query: 319 PCWTAQSLSALR------KEQDSSSKKDGHSPNKWDKDHIRWPMSGGHELQQAAPGSGRA 372
PC A+SLS + + +S G + + IR PM+ + A R
Sbjct: 29 PCPWAESLSPIGDMKVKGEAPANSGAPAGAAGRAKGESRIRRPMNAF--MVWAKDERKRL 86
Query: 373 HQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPKEVQLRGQAHKPG 432
Q +P+ N +S++L K W L E + + + A +++V H+Q P + +
Sbjct: 87 AQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVK 146
Query: 433 ASRTVQG--LHMASEDTAS---DEEPMVIHEEEGVTMSLLMMALAPLTLISSSRSHSRPP 487
+ V+G LH +E A+ E V + G+ P L H R
Sbjct: 147 RLKRVEGGFLHGLAEPQAAALGPEGGRVAMDGLGLQFPEQGFPAGPPLLPPHMGGHYRDC 206
Query: 488 GPLCTHPPLQGFFCPCPDSQPCGGPDPTSPGSDSDAALDAPPLP----------LPESHP 537
L PPL G+ P PD+ P G DP D A A P+P +
Sbjct: 207 QSLGA-PPLDGYPLPTPDTSPLDGVDP-------DPAFFAAPMPGDCPAAGTYSYAQVSD 258
Query: 538 CLTPPHPAQALVQPWLPCHCLCPRVGTLTAWLEGDTPALPQHLGVSITTTGSPAAVPGES 597
PP P + P L P + L A P L V GSP A G
Sbjct: 259 YAGPPEPPAGPMHPRLGPEPAGPSIPGLL--------APPSALHVYYGAMGSPGAGGGRG 310
Query: 598 W 598
+
Sbjct: 311 F 311
>gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens]
Length = 596
Score = 45.8 bits (107), Expect = 1e-04
Identities = 76/344 (22%), Positives = 117/344 (34%), Gaps = 74/344 (21%)
Query: 251 QSKQPAKLAAVAHERPPGGTGSVDPGR-PPGATCPESPGPGTPHTLGVVEPGKSPPPTME 309
Q P H P T + R PP P T HT G+ P P +
Sbjct: 243 QPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHH----TLHTTGIPHPAIVTPTVKQ 298
Query: 310 EEPWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGHELQQAAPGS 369
E + GS SS +D + K HI+ P++ +
Sbjct: 299 ESSQSDVGS--------------LHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAK 344
Query: 370 GRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPKEVQLRGQAH 429
A +++ ++QIL +RW+ L E KY++LA KE QL Q +
Sbjct: 345 VVAEC--TLKESAAINQILGRRWHALSREEQAKYYELA-----------RKERQLHMQLY 391
Query: 430 KPGASRTVQGLHMASEDTASDEEPMVIHEEEGVTMSLLMMALAPLTLISSSRSHSRPPGP 489
++R G + D++P +E ++ ++L P+T +S+ + G
Sbjct: 392 PGWSARDNYG---KKKKRKRDKQPGETNEHSECFLN-PCLSLPPITDLSAPKKCRARFG- 446
Query: 490 LCTHPPLQGFFC-PCPDSQPC-----GGPDPTSPGSDSDAALDAPP-------------- 529
Q +C PC + C G SP S + LD+PP
Sbjct: 447 ----LDQQNNWCGPCRRKKKCVRYIQGEGSCLSPPSSDGSLLDSPPPSPNLLGSPPRDAK 502
Query: 530 -------------LPLPESHPCLTPPHPAQALVQPWLPCHCLCP 560
P P +H + PP PA L + LCP
Sbjct: 503 SQTEQTQPLSLSLKPDPLAHLSMMPPPPALLLAEATHKASALCP 546
>gi|7705917 lymphoid enhancer-binding factor 1 isoform 1 [Homo
sapiens]
Length = 399
Score = 45.8 bits (107), Expect = 1e-04
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 16/133 (12%)
Query: 287 PGPGTPHTLGVVEPGKSPPPTMEEEPWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNK 346
PGP PHT G+ P P +E P T L ++ + + +++ P
Sbjct: 248 PGPPGPHTTGIPHPAIVTPQVKQEHPH--------TDSDLMHVKPQHEQRKEQEPKRP-- 297
Query: 347 WDKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDL 406
HI+ P++ + + A +++ ++QIL +RW+ L E KY++L
Sbjct: 298 ----HIKKPLNAFMLYMKEMRANVVAEC--TLKESAAINQILGRRWHALSREEQAKYYEL 351
Query: 407 AFQVKVAHLQQGP 419
A + + H+Q P
Sbjct: 352 ARKERQLHMQLYP 364
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 45.8 bits (107), Expect = 1e-04
Identities = 79/314 (25%), Positives = 112/314 (35%), Gaps = 49/314 (15%)
Query: 239 ARQPASHSVASNQSKQPAK--LAAVAHERPPGGTGSVDPGRPPGATCPESP-------GP 289
A +S S +S+ S PA L + H PP + SV +PP T P P GP
Sbjct: 384 AASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVS-NQPPKYTQPSLPSQAVWSQGP 442
Query: 290 GTPHTLGVV------EPGKSPPPTMEEEPWAPKGSPCWT--AQSLSALRKEQDSSSKKDG 341
P G + PG PP T + P S Q +++Q ++
Sbjct: 443 PPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQ 502
Query: 342 HSPNKWDKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQIL-SKRWYTLGPNET 400
H N +P H L+ G +H HP + +S L S R Y GP
Sbjct: 503 HHGNSGPPPPGAFP----HPLE-----GGSSHHAHP----YAMSPSLGSLRPYPPGPAHL 549
Query: 401 QKYHDLAFQVKVAHLQQGPKEVQLRGQAHKPGASRTVQGLHMASEDTASDEE---PMVIH 457
H +V++ Q GP + ++ +S T QG + S + S P
Sbjct: 550 PPPHS-----QVSYSQAGPNGPPVSSSSNS--SSSTSQGSYPCSHPSPSQGPQGAPYPFP 602
Query: 458 EEEGVTMSLLMMALAPLTLISSSRSH--SRPPGPLCTHPPLQGFFCPCPDSQPCGGPDPT 515
VT S ++ T+ SS + + PPGP P G P P + P
Sbjct: 603 PVPTVTTSSATLSTVIATVASSPAGYKTASPPGP-----PPYGKRAPSPGAYKTATPPGY 657
Query: 516 SPGSDSDAALDAPP 529
PGS PP
Sbjct: 658 KPGSPPSFRTGTPP 671
Score = 36.2 bits (82), Expect = 0.10
Identities = 80/361 (22%), Positives = 120/361 (33%), Gaps = 36/361 (9%)
Query: 215 GTSLCGCVPLVLCPLPDPSLQPHEARQPASHSVASNQSKQPAKLAAVAHERPPGGTGSVD 274
G +L P P P+L P A +P +++ AS L H P G
Sbjct: 282 GGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPG--HLPSPHAMGQGM 339
Query: 275 PGRPPGATCPESPGPGTPHTLGVVEPGKSPPPTMEEEPWAPKGSPCWTAQSLSALRKEQD 334
G PPG + P +PH+L PP P P P +++ S S+
Sbjct: 340 GGLPPGPEKGPTLAP-SPHSL---------PPASSSAPAPPMRFP-YSSSSSSSAAASSS 388
Query: 335 SSSKKDGHSPNKWDKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYT 394
SSS SP + +P S P + + P +T + S+ ++
Sbjct: 389 SSSSSSSASPFPASQALPSYPHS-------FPPPTSLSVSNQP--PKYTQPSLPSQAVWS 439
Query: 395 LGPNETQKYHDLAFQVKVAHLQQGPKEVQLRGQAHKPGASRTVQGLHMASEDTASDEEPM 454
GP Y L AH P + AH P ++ + ++
Sbjct: 440 QGPPPPPPYGRLLANSN-AHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQ 498
Query: 455 VIHEEEGVTMSLLMMALAPLTLISSSRSHSRP------PGPLCTHPPLQGFFCPCPDSQP 508
+ G + A P L S H+ P G L +PP P P SQ
Sbjct: 499 QQQQHHGNSGPPPPGAF-PHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHL-PPPHSQV 556
Query: 509 C---GGPDPTSPGSDSDAALDAPPLPLPESHPCLTPPHPAQALVQPWLPCHCLCPRVGTL 565
GP+ S S+++ P SHP +P Q P+ P + TL
Sbjct: 557 SYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHP--SPSQGPQGAPYPFPPVPTVTTSSATL 614
Query: 566 T 566
+
Sbjct: 615 S 615
Score = 32.3 bits (72), Expect = 1.5
Identities = 30/117 (25%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 230 PDPSLQPHEARQPASHSVASNQSKQPAKLAAVAHERPPGGTGSVDPGRPPGATCPESP-- 287
P P A P ++ A+ +P + PPG G+ P PG P SP
Sbjct: 634 PGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGT-SPPAGPGTFKPGSPTV 692
Query: 288 GPGTPHTLGVVEPGKSPPPTMEEEPWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSP 344
GPG + G S P++ P AP P +A + K++ + + SP
Sbjct: 693 GPGP-----LPPAGPSGLPSLPPPPAAPASGPPLSATQI----KQEPAEEYETPESP 740
Score = 32.0 bits (71), Expect = 1.9
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 11/84 (13%)
Query: 230 PDPSLQPHEARQPASHSV-----ASNQSKQPAKLAAVAHERPPGGTGSVDPGRPPGATCP 284
P+ S +PH + P + S + P + PGGTG V G P G
Sbjct: 179 PEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMG---- 234
Query: 285 ESPGPGTPHTLGVVEPGKS-PPPT 307
G G ++G GK PPPT
Sbjct: 235 -PKGGGAASSVGGPNGGKQHPPPT 257
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 45.8 bits (107), Expect = 1e-04
Identities = 79/314 (25%), Positives = 112/314 (35%), Gaps = 49/314 (15%)
Query: 239 ARQPASHSVASNQSKQPAK--LAAVAHERPPGGTGSVDPGRPPGATCPESP-------GP 289
A +S S +S+ S PA L + H PP + SV +PP T P P GP
Sbjct: 384 AASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVS-NQPPKYTQPSLPSQAVWSQGP 442
Query: 290 GTPHTLGVV------EPGKSPPPTMEEEPWAPKGSPCWT--AQSLSALRKEQDSSSKKDG 341
P G + PG PP T + P S Q +++Q ++
Sbjct: 443 PPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQ 502
Query: 342 HSPNKWDKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQIL-SKRWYTLGPNET 400
H N +P H L+ G +H HP + +S L S R Y GP
Sbjct: 503 HHGNSGPPPPGAFP----HPLE-----GGSSHHAHP----YAMSPSLGSLRPYPPGPAHL 549
Query: 401 QKYHDLAFQVKVAHLQQGPKEVQLRGQAHKPGASRTVQGLHMASEDTASDEE---PMVIH 457
H +V++ Q GP + ++ +S T QG + S + S P
Sbjct: 550 PPPHS-----QVSYSQAGPNGPPVSSSSNS--SSSTSQGSYPCSHPSPSQGPQGAPYPFP 602
Query: 458 EEEGVTMSLLMMALAPLTLISSSRSH--SRPPGPLCTHPPLQGFFCPCPDSQPCGGPDPT 515
VT S ++ T+ SS + + PPGP P G P P + P
Sbjct: 603 PVPTVTTSSATLSTVIATVASSPAGYKTASPPGP-----PPYGKRAPSPGAYKTATPPGY 657
Query: 516 SPGSDSDAALDAPP 529
PGS PP
Sbjct: 658 KPGSPPSFRTGTPP 671
Score = 36.2 bits (82), Expect = 0.10
Identities = 80/361 (22%), Positives = 120/361 (33%), Gaps = 36/361 (9%)
Query: 215 GTSLCGCVPLVLCPLPDPSLQPHEARQPASHSVASNQSKQPAKLAAVAHERPPGGTGSVD 274
G +L P P P+L P A +P +++ AS L H P G
Sbjct: 282 GGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPG--HLPSPHAMGQGM 339
Query: 275 PGRPPGATCPESPGPGTPHTLGVVEPGKSPPPTMEEEPWAPKGSPCWTAQSLSALRKEQD 334
G PPG + P +PH+L PP P P P +++ S S+
Sbjct: 340 GGLPPGPEKGPTLAP-SPHSL---------PPASSSAPAPPMRFP-YSSSSSSSAAASSS 388
Query: 335 SSSKKDGHSPNKWDKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYT 394
SSS SP + +P S P + + P +T + S+ ++
Sbjct: 389 SSSSSSSASPFPASQALPSYPHS-------FPPPTSLSVSNQP--PKYTQPSLPSQAVWS 439
Query: 395 LGPNETQKYHDLAFQVKVAHLQQGPKEVQLRGQAHKPGASRTVQGLHMASEDTASDEEPM 454
GP Y L AH P + AH P ++ + ++
Sbjct: 440 QGPPPPPPYGRLLANSN-AHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQ 498
Query: 455 VIHEEEGVTMSLLMMALAPLTLISSSRSHSRP------PGPLCTHPPLQGFFCPCPDSQP 508
+ G + A P L S H+ P G L +PP P P SQ
Sbjct: 499 QQQQHHGNSGPPPPGAF-PHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHL-PPPHSQV 556
Query: 509 C---GGPDPTSPGSDSDAALDAPPLPLPESHPCLTPPHPAQALVQPWLPCHCLCPRVGTL 565
GP+ S S+++ P SHP +P Q P+ P + TL
Sbjct: 557 SYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHP--SPSQGPQGAPYPFPPVPTVTTSSATL 614
Query: 566 T 566
+
Sbjct: 615 S 615
Score = 32.3 bits (72), Expect = 1.5
Identities = 30/117 (25%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
Query: 230 PDPSLQPHEARQPASHSVASNQSKQPAKLAAVAHERPPGGTGSVDPGRPPGATCPESP-- 287
P P A P ++ A+ +P + PPG G+ P PG P SP
Sbjct: 634 PGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGT-SPPAGPGTFKPGSPTV 692
Query: 288 GPGTPHTLGVVEPGKSPPPTMEEEPWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSP 344
GPG + G S P++ P AP P +A + K++ + + SP
Sbjct: 693 GPGP-----LPPAGPSGLPSLPPPPAAPASGPPLSATQI----KQEPAEEYETPESP 740
Score = 32.0 bits (71), Expect = 1.9
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 11/84 (13%)
Query: 230 PDPSLQPHEARQPASHSV-----ASNQSKQPAKLAAVAHERPPGGTGSVDPGRPPGATCP 284
P+ S +PH + P + S + P + PGGTG V G P G
Sbjct: 179 PEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMG---- 234
Query: 285 ESPGPGTPHTLGVVEPGKS-PPPT 307
G G ++G GK PPPT
Sbjct: 235 -PKGGGAASSVGGPNGGKQHPPPT 257
>gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens]
Length = 602
Score = 45.4 bits (106), Expect = 2e-04
Identities = 68/314 (21%), Positives = 101/314 (32%), Gaps = 31/314 (9%)
Query: 251 QSKQPAKLAAVAHERPPGGTGSVDPGR-PPGATCPESPGPGTPHTLGVVEPGKSPPPTME 309
Q P H P T + R PP P T HT G+ P P +
Sbjct: 266 QPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHH----TLHTTGIPHPAIVTPTVKQ 321
Query: 310 EEPWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGHELQQAAPGS 369
E + GS SS +D + K HI+ P++ +
Sbjct: 322 ESSQSDVGS--------------LHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAK 367
Query: 370 GRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPKEVQLRGQAH 429
A +++ ++QIL +RW+ L E KY++LA + + H+Q P
Sbjct: 368 VVAEC--TLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGK 425
Query: 430 KPGASRTVQGLHMASEDTASDEEPMVIHEEEGVTMSLLMMALAPLTLISSSRSHSRPP-- 487
K R Q +T + + + + + I S PP
Sbjct: 426 KKKRKRDKQPGETNDANTPKKCRALFGLDRQTLWCKPCRRKKKCVRYIQGEGSCLSPPSS 485
Query: 488 -GPLCTHPPLQGFFCPCPDSQPCGGPDPTSPGSDSDAALDAPPLPLPESHPCLTPPHPAQ 546
G L PP P + T P +L P PL +H + PP PA
Sbjct: 486 DGSLLDSPPPSPNLLGSPPRDAKSQTEQTQP-----LSLSLKPDPL--AHLSMMPPPPAL 538
Query: 547 ALVQPWLPCHCLCP 560
L + LCP
Sbjct: 539 LLAEATHKASALCP 552
>gi|217035121 HMG-BOX transcription factor BBX isoform 1 [Homo
sapiens]
Length = 941
Score = 43.5 bits (101), Expect = 6e-04
Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Query: 309 EEEPWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGHELQQAAPG 368
EEE + Q L A EQD +D SP + R PM+ L
Sbjct: 41 EEEEEEDEEEDIDKVQLLGADGLEQDVGETEDDESPEQ----RARRPMNAF--LLFCKRH 94
Query: 369 SGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGP 419
Q HP DN ++IL+ W L P E QKY D+A + K A ++ P
Sbjct: 95 RSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANP 145
>gi|18378731 HMG-BOX transcription factor BBX isoform 2 [Homo
sapiens]
Length = 911
Score = 43.5 bits (101), Expect = 6e-04
Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Query: 309 EEEPWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGHELQQAAPG 368
EEE + Q L A EQD +D SP + R PM+ L
Sbjct: 41 EEEEEEDEEEDIDKVQLLGADGLEQDVGETEDDESPEQ----RARRPMNAF--LLFCKRH 94
Query: 369 SGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGP 419
Q HP DN ++IL+ W L P E QKY D+A + K A ++ P
Sbjct: 95 RSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANP 145
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 42.7 bits (99), Expect = 0.001
Identities = 70/311 (22%), Positives = 100/311 (32%), Gaps = 57/311 (18%)
Query: 266 PPGGTG----SVDPGRPPGATCPESPG--PGTPHTLGVVEPGKSPPPTMEEEPWAPKGSP 319
P GGT S PG PGA SPG PG+ H++ G SP P P +G
Sbjct: 7 PLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSM----MGPSPGPPSAGHPIPTQGPG 62
Query: 320 CWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGHELQQAAPGSGRAH-QGHPN 378
+ ++ + K +S +K ++++ SGGH P H QG+P+
Sbjct: 63 GYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPS 122
Query: 379 QDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPKEVQLRGQAHKPGASRTVQ 438
LG +E + V + GP+ G A GA
Sbjct: 123 ---------------PLGGSE-----HASSPVPASGPSSGPQMSSGPGGAPLDGADPQAL 162
Query: 439 GLHMASEDTASDEEPMVIHEEEGVTMSLLMMALA---------------PLTLISSSRSH 483
G + + +H+ M+ M+A P+ +
Sbjct: 163 GQQNRGPTPFNQNQ---LHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPT 219
Query: 484 SRPPGPLCTHPPLQGFFCPCPDSQPCGGPDPTSPGSDSDAALDAP--PLPLPESHPCLTP 541
PP T P P P P GP P P + P P P P P P
Sbjct: 220 LPPPSVSATGPG------PGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMP 273
Query: 542 PHPAQALVQPW 552
P +PW
Sbjct: 274 GQPPGGPPKPW 284
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 42.7 bits (99), Expect = 0.001
Identities = 70/311 (22%), Positives = 100/311 (32%), Gaps = 57/311 (18%)
Query: 266 PPGGTG----SVDPGRPPGATCPESPG--PGTPHTLGVVEPGKSPPPTMEEEPWAPKGSP 319
P GGT S PG PGA SPG PG+ H++ G SP P P +G
Sbjct: 7 PLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSM----MGPSPGPPSAGHPIPTQGPG 62
Query: 320 CWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGHELQQAAPGSGRAH-QGHPN 378
+ ++ + K +S +K ++++ SGGH P H QG+P+
Sbjct: 63 GYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPS 122
Query: 379 QDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPKEVQLRGQAHKPGASRTVQ 438
LG +E + V + GP+ G A GA
Sbjct: 123 ---------------PLGGSE-----HASSPVPASGPSSGPQMSSGPGGAPLDGADPQAL 162
Query: 439 GLHMASEDTASDEEPMVIHEEEGVTMSLLMMALA---------------PLTLISSSRSH 483
G + + +H+ M+ M+A P+ +
Sbjct: 163 GQQNRGPTPFNQNQ---LHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPT 219
Query: 484 SRPPGPLCTHPPLQGFFCPCPDSQPCGGPDPTSPGSDSDAALDAP--PLPLPESHPCLTP 541
PP T P P P P GP P P + P P P P P P
Sbjct: 220 LPPPSVSATGPG------PGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMP 273
Query: 542 PHPAQALVQPW 552
P +PW
Sbjct: 274 GQPPGGPPKPW 284
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 42.7 bits (99), Expect = 0.001
Identities = 70/311 (22%), Positives = 100/311 (32%), Gaps = 57/311 (18%)
Query: 266 PPGGTG----SVDPGRPPGATCPESPG--PGTPHTLGVVEPGKSPPPTMEEEPWAPKGSP 319
P GGT S PG PGA SPG PG+ H++ G SP P P +G
Sbjct: 7 PLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSM----MGPSPGPPSAGHPIPTQGPG 62
Query: 320 CWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGHELQQAAPGSGRAH-QGHPN 378
+ ++ + K +S +K ++++ SGGH P H QG+P+
Sbjct: 63 GYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPS 122
Query: 379 QDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPKEVQLRGQAHKPGASRTVQ 438
LG +E + V + GP+ G A GA
Sbjct: 123 ---------------PLGGSE-----HASSPVPASGPSSGPQMSSGPGGAPLDGADPQAL 162
Query: 439 GLHMASEDTASDEEPMVIHEEEGVTMSLLMMALA---------------PLTLISSSRSH 483
G + + +H+ M+ M+A P+ +
Sbjct: 163 GQQNRGPTPFNQNQ---LHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPT 219
Query: 484 SRPPGPLCTHPPLQGFFCPCPDSQPCGGPDPTSPGSDSDAALDAP--PLPLPESHPCLTP 541
PP T P P P P GP P P + P P P P P P
Sbjct: 220 LPPPSVSATGPG------PGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMP 273
Query: 542 PHPAQALVQPW 552
P +PW
Sbjct: 274 GQPPGGPPKPW 284
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 42.7 bits (99), Expect = 0.001
Identities = 70/311 (22%), Positives = 100/311 (32%), Gaps = 57/311 (18%)
Query: 266 PPGGTG----SVDPGRPPGATCPESPG--PGTPHTLGVVEPGKSPPPTMEEEPWAPKGSP 319
P GGT S PG PGA SPG PG+ H++ G SP P P +G
Sbjct: 7 PLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSM----MGPSPGPPSAGHPIPTQGPG 62
Query: 320 CWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGHELQQAAPGSGRAH-QGHPN 378
+ ++ + K +S +K ++++ SGGH P H QG+P+
Sbjct: 63 GYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPS 122
Query: 379 QDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPKEVQLRGQAHKPGASRTVQ 438
LG +E + V + GP+ G A GA
Sbjct: 123 ---------------PLGGSE-----HASSPVPASGPSSGPQMSSGPGGAPLDGADPQAL 162
Query: 439 GLHMASEDTASDEEPMVIHEEEGVTMSLLMMALA---------------PLTLISSSRSH 483
G + + +H+ M+ M+A P+ +
Sbjct: 163 GQQNRGPTPFNQNQ---LHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPT 219
Query: 484 SRPPGPLCTHPPLQGFFCPCPDSQPCGGPDPTSPGSDSDAALDAP--PLPLPESHPCLTP 541
PP T P P P P GP P P + P P P P P P
Sbjct: 220 LPPPSVSATGPG------PGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMP 273
Query: 542 PHPAQALVQPW 552
P +PW
Sbjct: 274 GQPPGGPPKPW 284
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 42.7 bits (99), Expect = 0.001
Identities = 70/311 (22%), Positives = 100/311 (32%), Gaps = 57/311 (18%)
Query: 266 PPGGTG----SVDPGRPPGATCPESPG--PGTPHTLGVVEPGKSPPPTMEEEPWAPKGSP 319
P GGT S PG PGA SPG PG+ H++ G SP P P +G
Sbjct: 7 PLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSM----MGPSPGPPSAGHPIPTQGPG 62
Query: 320 CWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIRWPMSGGHELQQAAPGSGRAH-QGHPN 378
+ ++ + K +S +K ++++ SGGH P H QG+P+
Sbjct: 63 GYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPS 122
Query: 379 QDNWTVSQILSKRWYTLGPNETQKYHDLAFQVKVAHLQQGPKEVQLRGQAHKPGASRTVQ 438
LG +E + V + GP+ G A GA
Sbjct: 123 ---------------PLGGSE-----HASSPVPASGPSSGPQMSSGPGGAPLDGADPQAL 162
Query: 439 GLHMASEDTASDEEPMVIHEEEGVTMSLLMMALA---------------PLTLISSSRSH 483
G + + +H+ M+ M+A P+ +
Sbjct: 163 GQQNRGPTPFNQNQ---LHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPT 219
Query: 484 SRPPGPLCTHPPLQGFFCPCPDSQPCGGPDPTSPGSDSDAALDAP--PLPLPESHPCLTP 541
PP T P P P P GP P P + P P P P P P
Sbjct: 220 LPPPSVSATGPG------PGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMP 273
Query: 542 PHPAQALVQPW 552
P +PW
Sbjct: 274 GQPPGGPPKPW 284
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,550,541
Number of Sequences: 37866
Number of extensions: 2191534
Number of successful extensions: 13423
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 594
Number of HSP's that attempted gapping in prelim test: 10418
Number of HSP's gapped (non-prelim): 3252
length of query: 679
length of database: 18,247,518
effective HSP length: 109
effective length of query: 570
effective length of database: 14,120,124
effective search space: 8048470680
effective search space used: 8048470680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.