Guide to the Human Genome
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Name: CACNA1G Sequence: fasta or formatted (2261aa) NCBI GI: 38505278
Description:

voltage-dependent calcium channel alpha 1G subunit isoform 11

Referenced in:

Calcium and TRP Cation Channels
Lung

Other entries for this name:
alt prot [2377aa] voltage-dependent calcium channel alpha 1G subunit isoform 1
alt prot [2171aa] voltage-dependent calcium channel alpha 1G subunit isoform 14
alt prot [2354aa] voltage-dependent calcium channel alpha 1G subunit isoform 2
alt prot [2273aa] voltage-dependent calcium channel alpha 1G subunit isoform 9
alt prot [2298aa] voltage-dependent calcium channel alpha 1G subunit isoform 7
alt prot [2321aa] voltage-dependent calcium channel alpha 1G subunit isoform 5
alt prot [2306aa] voltage-dependent calcium channel alpha 1G subunit isoform 6
alt prot [2284aa] voltage-dependent calcium channel alpha 1G subunit isoform 8
alt prot [2332aa] voltage-dependent calcium channel alpha 1G subunit isoform 4
alt prot [2266aa] voltage-dependent calcium channel alpha 1G subunit isoform 10
alt prot [2250aa] voltage-dependent calcium channel alpha 1G subunit isoform 12
alt prot [2243aa] voltage-dependent calcium channel alpha 1G subunit isoform 13
alt prot [2343aa] voltage-dependent calcium channel alpha 1G subunit isoform 3
alt prot [1555aa] voltage-dependent calcium channel alpha 1G subunit isoform 15
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9        157           2
 C cysteine            2.3         53           2
 D aspartate           4.9        110           2
 E glutamate           5.6        127           4
 F phenylalanine       4.7        106           2
 G glycine             7.0        158           4
 H histidine           2.8         64           9
 I isoleucine          4.8        108           2
 K lysine              3.3         74           3
 L leucine            11.4        258           3
 M methionine          2.6         58           1
 N asparagine          3.0         68           1
 P proline             7.2        163           3
 Q glutamine           3.4         76           2
 R arginine            6.6        149           3
 S serine             10.0        225           3
 T threonine           4.0         90           2
 V valine              6.1        137           3
 W tryptophan          1.3         30           1
 Y tyrosine            2.2         50           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   voltage-dependent calcium channel alpha 1G subunit i... 
CACNA1G               0.997   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.995   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.992   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.991   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.990   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.989   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.987   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.987   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.984   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.892   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.837   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.834   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.828   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.636   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1H               0.509   calcium channel, voltage-dependent, T type, alpha 1H...
CACNA1H               0.508   calcium channel, voltage-dependent, T type, alpha 1H...
CACNA1I               0.315   calcium channel, voltage-dependent, T type, alpha 1I...
CACNA1I               0.315   calcium channel, voltage-dependent, T type, alpha 1I...
SCN5A                 0.092   voltage-gated sodium channel type V alpha isoform a ...
SCN5A                 0.092   voltage-gated sodium channel type V alpha isoform c...
SCN5A                 0.092   voltage-gated sodium channel type V alpha isoform b ...
SCN5A                 0.089   voltage-gated sodium channel type V alpha isoform f...
SCN10A                0.087   sodium channel, voltage-gated, type X, alpha 
SCN11A                0.070   sodium channel, voltage-gated, type XI, alpha [Homo...
SCN9A                 0.067   sodium channel, voltage-gated, type IX, alpha 
CACNA1C               0.067   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.067   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.067   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.067   calcium channel, voltage-dependent, L type, alpha 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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