TTC21A 6277

Name: TTC21A	Sequence: fasta or formatted (1320aa)		NCBI GI: 157502177
Description: tetratricopeptide repeat domain 21A isoform 2		Referenced in: Additional Structural Proteins Tetratricopeptide Domains
Other entries for this name: alt prot [1321aa] tetratricopeptide repeat domain 21A isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 112 3 C cysteine 2.2 29 2 D aspartate 4.2 55 1 E glutamate 8.6 113 3 F phenylalanine 3.1 41 2 G glycine 4.2 55 2 H histidine 3.3 44 2 I isoleucine 5.7 75 2 K lysine 8.0 105 2 L leucine 13.7 181 4 M methionine 2.8 37 2 N asparagine 3.4 45 1 P proline 3.6 47 1 Q glutamine 5.3 70 2 R arginine 4.4 58 2 S serine 5.5 73 2 T threonine 3.0 39 2 V valine 5.5 73 2 W tryptophan 0.7 9 1 Y tyrosine 4.5 59 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tetratricopeptide repeat domain 21A isoform 2 [Homo... TTC21A 0.998 tetratricopeptide repeat domain 21A isoform 1 [Homo... TTC21B 0.517 tetratricopeptide repeat domain 21B CTR9 0.010 SH2 domain binding protein 1 BBS4 0.010 Bardet-Biedl syndrome 4 TMTC1 0.010 transmembrane and tetratricopeptide repeat containin... OGT 0.008 O-linked GlcNAc transferase isoform 2 OGT 0.008 O-linked GlcNAc transferase isoform 1 NPHP3 0.007 nephrocystin 3 TMTC2 0.007 transmembrane and tetratricopeptide repeat containin... CDC27 0.007 cell division cycle protein 27 isoform 1 CDC27 0.007 cell division cycle protein 27 isoform 2 DNAJC3 0.006 DnaJ (Hsp40) homolog, subfamily C, member 3 STIP1 0.005 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi... CDC23 0.005 cell division cycle protein 23 TMTC3 0.005 transmembrane and tetratricopeptide repeat containi... TTC7A 0.005 tetratricopeptide repeat domain 7A MAP1A 0.005 microtubule-associated protein 1A NARG1 0.005 NMDA receptor regulated 1 RPAP3 0.004 RNA polymerase II associated protein 3 isoform 2 [H... RPAP3 0.004 RNA polymerase II associated protein 3 isoform 1 [H... IFT88 0.004 intraflagellar transport 88 homolog isoform 1 IFT88 0.004 intraflagellar transport 88 homolog isoform 2 RAPSN 0.004 43 kD receptor-associated protein of the synapse iso... ADCY10 0.004 adenylate cyclase 10 TTC7B 0.004 tetratricopeptide repeat domain 7B FKBP4 0.003 FK506 binding protein 52 TTC6 0.003 PREDICTED: tetratricopeptide repeat domain 6 TTC6 0.003 PREDICTED: tetratricopeptide repeat domain 6 C14orf25 0.003 PREDICTED: chromosome 14 open reading frame 25 [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.