Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 23065529
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23065529 growth arrest-specific 2 like 1 isoform b [Homo
sapiens]
(337 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23065529 growth arrest-specific 2 like 1 isoform b [Homo sapi... 682 0.0
gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo sapi... 682 0.0
gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo sapi... 682 0.0
gi|21281675 growth arrest-specific 2 like 2 [Homo sapiens] 316 2e-86
gi|219842340 growth arrest-specific 2 [Homo sapiens] 170 1e-42
gi|29540559 growth arrest-specific 2 [Homo sapiens] 170 1e-42
gi|4885253 growth arrest-specific 2 [Homo sapiens] 170 1e-42
gi|28372563 growth arrest-specific 2 like 3 [Homo sapiens] 154 1e-37
gi|33188445 microfilament and actin filament cross-linker protei... 78 1e-14
gi|33188443 microfilament and actin filament cross-linker protei... 72 9e-13
gi|221316624 dystonin isoform 4 [Homo sapiens] 69 6e-12
gi|221316622 dystonin isoform 3 [Homo sapiens] 69 6e-12
gi|221316618 dystonin isoform 2 [Homo sapiens] 69 6e-12
gi|34577047 dystonin isoform 1 [Homo sapiens] 69 6e-12
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens] 69 6e-12
gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo ... 36 0.056
gi|163310745 LIM and calponin homology domains 1 isoform c [Homo... 36 0.056
gi|163310743 LIM and calponin homology domains 1 isoform b [Homo... 36 0.056
gi|163310741 LIM and calponin homology domains 1 isoform a [Homo... 36 0.056
gi|61835232 growth differentiation factor 7 preproprotein [Homo ... 36 0.056
gi|17511255 poly(A) binding protein interacting protein 1 isofor... 35 0.073
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens] 35 0.073
gi|4506787 IQ motif containing GTPase activating protein 1 [Homo... 35 0.095
gi|191252814 RIMS binding protein 3B [Homo sapiens] 35 0.12
gi|191252806 RIMS binding protein 3C [Homo sapiens] 35 0.12
gi|153792195 DKFZP434H0735 protein [Homo sapiens] 35 0.12
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 34 0.16
gi|19743875 fumarate hydratase precursor [Homo sapiens] 34 0.16
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens] 33 0.28
gi|239753114 PREDICTED: hypothetical protein [Homo sapiens] 33 0.28
>gi|23065529 growth arrest-specific 2 like 1 isoform b [Homo
sapiens]
Length = 337
Score = 682 bits (1760), Expect = 0.0
Identities = 337/337 (100%), Positives = 337/337 (100%)
Query: 1 MADPVAGIAGSAAKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGT 60
MADPVAGIAGSAAKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGT
Sbjct: 1 MADPVAGIAGSAAKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGT 60
Query: 61 TLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVL 120
TLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVL
Sbjct: 61 TLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVL 120
Query: 121 MFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAA 180
MFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAA
Sbjct: 121 MFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAA 180
Query: 181 GEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQFPMIKVSEGKYRVGDS 240
GEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQFPMIKVSEGKYRVGDS
Sbjct: 181 GEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQFPMIKVSEGKYRVGDS 240
Query: 241 SLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTT 300
SLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTT
Sbjct: 241 SLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTT 300
Query: 301 SPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPR 337
SPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPR
Sbjct: 301 SPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPR 337
>gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 682 bits (1760), Expect = 0.0
Identities = 337/337 (100%), Positives = 337/337 (100%)
Query: 1 MADPVAGIAGSAAKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGT 60
MADPVAGIAGSAAKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGT
Sbjct: 1 MADPVAGIAGSAAKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGT 60
Query: 61 TLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVL 120
TLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVL
Sbjct: 61 TLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVL 120
Query: 121 MFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAA 180
MFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAA
Sbjct: 121 MFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAA 180
Query: 181 GEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQFPMIKVSEGKYRVGDS 240
GEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQFPMIKVSEGKYRVGDS
Sbjct: 181 GEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQFPMIKVSEGKYRVGDS 240
Query: 241 SLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTT 300
SLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTT
Sbjct: 241 SLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTT 300
Query: 301 SPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPR 337
SPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPR
Sbjct: 301 SPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPR 337
>gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 682 bits (1760), Expect = 0.0
Identities = 337/337 (100%), Positives = 337/337 (100%)
Query: 1 MADPVAGIAGSAAKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGT 60
MADPVAGIAGSAAKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGT
Sbjct: 1 MADPVAGIAGSAAKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGT 60
Query: 61 TLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVL 120
TLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVL
Sbjct: 61 TLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVL 120
Query: 121 MFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAA 180
MFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAA
Sbjct: 121 MFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAA 180
Query: 181 GEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQFPMIKVSEGKYRVGDS 240
GEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQFPMIKVSEGKYRVGDS
Sbjct: 181 GEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQFPMIKVSEGKYRVGDS 240
Query: 241 SLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTT 300
SLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTT
Sbjct: 241 SLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTT 300
Query: 301 SPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPR 337
SPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPR
Sbjct: 301 SPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPR 337
>gi|21281675 growth arrest-specific 2 like 2 [Homo sapiens]
Length = 880
Score = 316 bits (810), Expect = 2e-86
Identities = 188/367 (51%), Positives = 223/367 (60%), Gaps = 58/367 (15%)
Query: 1 MADPVAG-----IAGSAAKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTG 55
M+ P G G S+RPF+SSE Y+EAMKEDLAEWL LYGL + FL
Sbjct: 1 MSQPAGGRRKPRTLGPPVCSIRPFKSSEQYLEAMKEDLAEWLRDLYGLDIDAAN--FLQV 58
Query: 56 LATGTTLCQHANAVTEAARALAAARPAR---------GVAFQAHSVVPGSFMARDNVATF 106
L TG LCQHAN VT+AA A A PA+ GV+ + PG+F ARDNV+ F
Sbjct: 59 LETGLVLCQHANVVTDAALAFLAEAPAQAQKIPMPRVGVSCNG-AAQPGTFQARDNVSNF 117
Query: 107 IGWCRVELGVPEVLMFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIER 166
I WCR E+G+ EVLMFETEDLVLRKN K+VVLCLLE+ RR R G+ AP LVQ E+EIE
Sbjct: 118 IQWCRKEMGIQEVLMFETEDLVLRKNVKNVVLCLLELGRRAWRFGVAAPTLVQLEEEIEE 177
Query: 167 ELR---AAPPAPNAPAAGEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPD 223
E+R A PP +P PAP PR P RNLD++V+ ++ CTCP
Sbjct: 178 EVRRELALPPPDPSP----------PAP------PRRQPCHFRNLDQMVQSLVSHCTCPV 221
Query: 224 QFPMIKVSEGKYRVGDSSLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAH-- 281
QF M+KVSEGKYRVGDS+ LIF+R+LR+HVMVRVGGGWDTL HYLDKHDPCRC+S +H
Sbjct: 222 QFSMVKVSEGKYRVGDSNTLIFIRILRNHVMVRVGGGWDTLGHYLDKHDPCRCTSLSHKP 281
Query: 282 ----RPPQPRV-----CTFSPQRVSPT-TSPRPASPVP--------GSERRGSRPEMTPV 323
+PP P V P + PT T R SP P S+RR P TP
Sbjct: 282 GSFLKPPAPPVQHEVRVQDGPSQTQPTMTISRSQSPPPPVDWKTYTSSDRRLRPP--TPS 339
Query: 324 SLRSTKE 330
S R +E
Sbjct: 340 SPRPRRE 346
Score = 28.5 bits (62), Expect = 8.9
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 293 PQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETP 335
P PT P SP S ++G P+ T R + PE P
Sbjct: 370 PSWRQPTAGDSPPSPQSSSTQKGRDPQCTSSGKREERYPPELP 412
>gi|219842340 growth arrest-specific 2 [Homo sapiens]
Length = 313
Score = 170 bits (431), Expect = 1e-42
Identities = 105/261 (40%), Positives = 152/261 (58%), Gaps = 28/261 (10%)
Query: 23 EAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGTTLCQHANAVTEAAR-ALAAARP 81
EA + MKEDLA WL L G + + F+ L G LCQ A + E + ++ A +P
Sbjct: 30 EANLLPMKEDLALWLTNLLGKEITA--ETFMEKLDNGALLCQLAETMQEKFKESMDANKP 87
Query: 82 ARGVAFQA----HSVVPGSFMARDNVATFIGWCRVELGVPEVLMFETEDLVLRKNEKSVV 137
+ + + S GSF ARDN A F+ WCR +LGV E +FE+E LVL K + V
Sbjct: 88 TKNLPLKKIPCKTSAPSGSFFARDNTANFLSWCR-DLGVDETCLFESEGLVLHKQPREVC 146
Query: 138 LCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAAGEDTTETAPAPGTPARG 197
LCLLE+ R AR G+ P L++ E+EIE+E + P+P +P+P + + G
Sbjct: 147 LCLLELGRIAARYGVEPPGLIKLEKEIEQEETLSAPSP------------SPSPSSKSSG 194
Query: 198 PRMTPSDLRNLDELVREIL--GRCTCPDQFPMIKVSEGKYRVGDSSLLIFVRVLRS-HVM 254
+ T + LD+ V+ I C CP++F + ++S+G+YRVG+ ++F+R+L + HVM
Sbjct: 195 KKSTGN---LLDDAVKRISEDPPCKCPNKFCVERLSQGRYRVGEK--ILFIRMLHNKHVM 249
Query: 255 VRVGGGWDTLEHYLDKHDPCR 275
VRVGGGW+T YL KHDPCR
Sbjct: 250 VRVGGGWETFAGYLLKHDPCR 270
>gi|29540559 growth arrest-specific 2 [Homo sapiens]
Length = 313
Score = 170 bits (431), Expect = 1e-42
Identities = 105/261 (40%), Positives = 152/261 (58%), Gaps = 28/261 (10%)
Query: 23 EAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGTTLCQHANAVTEAAR-ALAAARP 81
EA + MKEDLA WL L G + + F+ L G LCQ A + E + ++ A +P
Sbjct: 30 EANLLPMKEDLALWLTNLLGKEITA--ETFMEKLDNGALLCQLAETMQEKFKESMDANKP 87
Query: 82 ARGVAFQA----HSVVPGSFMARDNVATFIGWCRVELGVPEVLMFETEDLVLRKNEKSVV 137
+ + + S GSF ARDN A F+ WCR +LGV E +FE+E LVL K + V
Sbjct: 88 TKNLPLKKIPCKTSAPSGSFFARDNTANFLSWCR-DLGVDETCLFESEGLVLHKQPREVC 146
Query: 138 LCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAAGEDTTETAPAPGTPARG 197
LCLLE+ R AR G+ P L++ E+EIE+E + P+P +P+P + + G
Sbjct: 147 LCLLELGRIAARYGVEPPGLIKLEKEIEQEETLSAPSP------------SPSPSSKSSG 194
Query: 198 PRMTPSDLRNLDELVREIL--GRCTCPDQFPMIKVSEGKYRVGDSSLLIFVRVLRS-HVM 254
+ T + LD+ V+ I C CP++F + ++S+G+YRVG+ ++F+R+L + HVM
Sbjct: 195 KKSTGN---LLDDAVKRISEDPPCKCPNKFCVERLSQGRYRVGEK--ILFIRMLHNKHVM 249
Query: 255 VRVGGGWDTLEHYLDKHDPCR 275
VRVGGGW+T YL KHDPCR
Sbjct: 250 VRVGGGWETFAGYLLKHDPCR 270
>gi|4885253 growth arrest-specific 2 [Homo sapiens]
Length = 313
Score = 170 bits (431), Expect = 1e-42
Identities = 105/261 (40%), Positives = 152/261 (58%), Gaps = 28/261 (10%)
Query: 23 EAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGTTLCQHANAVTEAAR-ALAAARP 81
EA + MKEDLA WL L G + + F+ L G LCQ A + E + ++ A +P
Sbjct: 30 EANLLPMKEDLALWLTNLLGKEITA--ETFMEKLDNGALLCQLAETMQEKFKESMDANKP 87
Query: 82 ARGVAFQA----HSVVPGSFMARDNVATFIGWCRVELGVPEVLMFETEDLVLRKNEKSVV 137
+ + + S GSF ARDN A F+ WCR +LGV E +FE+E LVL K + V
Sbjct: 88 TKNLPLKKIPCKTSAPSGSFFARDNTANFLSWCR-DLGVDETCLFESEGLVLHKQPREVC 146
Query: 138 LCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAAGEDTTETAPAPGTPARG 197
LCLLE+ R AR G+ P L++ E+EIE+E + P+P +P+P + + G
Sbjct: 147 LCLLELGRIAARYGVEPPGLIKLEKEIEQEETLSAPSP------------SPSPSSKSSG 194
Query: 198 PRMTPSDLRNLDELVREIL--GRCTCPDQFPMIKVSEGKYRVGDSSLLIFVRVLRS-HVM 254
+ T + LD+ V+ I C CP++F + ++S+G+YRVG+ ++F+R+L + HVM
Sbjct: 195 KKSTGN---LLDDAVKRISEDPPCKCPNKFCVERLSQGRYRVGEK--ILFIRMLHNKHVM 249
Query: 255 VRVGGGWDTLEHYLDKHDPCR 275
VRVGGGW+T YL KHDPCR
Sbjct: 250 VRVGGGWETFAGYLLKHDPCR 270
>gi|28372563 growth arrest-specific 2 like 3 [Homo sapiens]
Length = 694
Score = 154 bits (389), Expect = 1e-37
Identities = 117/334 (35%), Positives = 167/334 (50%), Gaps = 47/334 (14%)
Query: 23 EAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGTTLCQHANAVTEAARALAAAR-- 80
EA + M+EDL+ WL+ L LG+ + L L G LCQ + + + +
Sbjct: 44 EATLLPMQEDLSIWLSGL--LGIKVKAEKLLEELDNGVLLCQLIDVLQNMVKTCNSEESG 101
Query: 81 --PARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVLMFETEDLVLRKNEKSVVL 138
P R V + + GSF ARDN A F+ WCR ++GV E +FE+E LVL K+ + V L
Sbjct: 102 NFPMRKVPCKKDAA-SGSFFARDNTANFLHWCR-DIGVDETYLFESEGLVLHKDPRQVYL 159
Query: 139 CLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAAGEDTTETAPAPGTPARGP 198
CLLE+ R +R G+ P LV+ E+EIE E ET P
Sbjct: 160 CLLEIGRIVSRYGVEPPVLVKLEKEIELE------------------ETLLNTSGPEDSI 201
Query: 199 RMTPSDLRN--LDELVREIL--GRCTCPDQFPMIKVSEGKYRVGDSSLLIFVRVLR-SHV 253
+ S R+ L E V+ I C+C +F + +SEG+YR+GD ++F+R+L HV
Sbjct: 202 SIPKSCCRHEELHEAVKHIAEDPPCSCSHRFSIEYLSEGRYRLGDK--ILFIRMLHGKHV 259
Query: 254 MVRVGGGWDTLEHYLDKHDPCRCSSTAHRPPQPRVCTF-----------SPQRVSPTTSP 302
MVRVGGGWDTL+ +L K+DPCR A + ++ F SP R
Sbjct: 260 MVRVGGGWDTLQGFLLKYDPCRILQFA--TLEQKILAFQKGVSNESVPDSPARTPQPPEM 317
Query: 303 RPASPVPGSERRGSRPEMTPVSLRSTKEGPETPP 336
P S V +++ S+P + PVS+ +KE PP
Sbjct: 318 NPLSAVNMFQKQNSKPSV-PVSIPKSKEKQGRPP 350
>gi|33188445 microfilament and actin filament cross-linker protein
isoform a [Homo sapiens]
Length = 5430
Score = 78.2 bits (191), Expect = 1e-14
Identities = 48/135 (35%), Positives = 67/135 (49%), Gaps = 11/135 (8%)
Query: 209 DELVREILGRCTCPDQFPMIKVSEGKYRVGDSSLLIFVRVLRSHVMVRVGGGWDTLEHYL 268
DE+ R++ +C C +F + ++ E KYR GDS L VR+LRS VMVRVGGGW L+ +L
Sbjct: 5166 DEVTRQV-AQCKCAKRFQVEQIGENKYRFGDSQQLRLVRILRSTVMVRVGGGWMALDEFL 5224
Query: 269 DKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTTSP--------RPASPVPGSERRGSRPEM 320
K+DPCR + + R P+ S +P +P+S R S
Sbjct: 5225 VKNDPCRARGRTN--IELREKFILPEGASQGMTPFRSRGRRSKPSSRAASPTRSSSSASQ 5282
Query: 321 TPVSLRSTKEGPETP 335
+ S S P TP
Sbjct: 5283 SNHSCTSMPSSPATP 5297
>gi|33188443 microfilament and actin filament cross-linker protein
isoform b [Homo sapiens]
Length = 5938
Score = 71.6 bits (174), Expect = 9e-13
Identities = 48/141 (34%), Positives = 67/141 (47%), Gaps = 17/141 (12%)
Query: 209 DELVREILGRCTCPDQFPMIKVSEGKYR------VGDSSLLIFVRVLRSHVMVRVGGGWD 262
DE+ R++ +C C +F + ++ E KYR GDS L VR+LRS VMVRVGGGW
Sbjct: 5668 DEVTRQV-AQCKCAKRFQVEQIGENKYRFFLGNQFGDSQQLRLVRILRSTVMVRVGGGWM 5726
Query: 263 TLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTTSP--------RPASPVPGSERR 314
L+ +L K+DPCR + + R P+ S +P +P+S R
Sbjct: 5727 ALDEFLVKNDPCRARGRTN--IELREKFILPEGASQGMTPFRSRGRRSKPSSRAASPTRS 5784
Query: 315 GSRPEMTPVSLRSTKEGPETP 335
S + S S P TP
Sbjct: 5785 SSSASQSNHSCTSMPSSPATP 5805
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 68.9 bits (167), Expect = 6e-12
Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 17/115 (14%)
Query: 209 DELVREILGRCTCPDQFPMIKVSEGKYRV------GDSSLLIFVRVLRSHVMVRVGGGWD 262
DE+ R++ +C C +F + ++ + KYR GDS L VR+LRS VMVRVGGGW
Sbjct: 5223 DEVTRQV-AKCKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILRSTVMVRVGGGWM 5281
Query: 263 TLEHYLDKHDPCRCSSTAHRPPQPR----------VCTFSPQRVSPTTSPRPASP 307
L+ +L K+DPCR + + + + F P+ S R ASP
Sbjct: 5282 ALDEFLVKNDPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSRPSSRGASP 5336
>gi|221316622 dystonin isoform 3 [Homo sapiens]
Length = 5537
Score = 68.9 bits (167), Expect = 6e-12
Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 17/115 (14%)
Query: 209 DELVREILGRCTCPDQFPMIKVSEGKYRV------GDSSLLIFVRVLRSHVMVRVGGGWD 262
DE+ R++ +C C +F + ++ + KYR GDS L VR+LRS VMVRVGGGW
Sbjct: 5234 DEVTRQV-AKCKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILRSTVMVRVGGGWM 5292
Query: 263 TLEHYLDKHDPCRCSSTAHRPPQPR----------VCTFSPQRVSPTTSPRPASP 307
L+ +L K+DPCR + + + + F P+ S R ASP
Sbjct: 5293 ALDEFLVKNDPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSRPSSRGASP 5347
>gi|221316618 dystonin isoform 2 [Homo sapiens]
Length = 5675
Score = 68.9 bits (167), Expect = 6e-12
Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 17/115 (14%)
Query: 209 DELVREILGRCTCPDQFPMIKVSEGKYRV------GDSSLLIFVRVLRSHVMVRVGGGWD 262
DE+ R++ +C C +F + ++ + KYR GDS L VR+LRS VMVRVGGGW
Sbjct: 5372 DEVTRQV-AKCKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILRSTVMVRVGGGWM 5430
Query: 263 TLEHYLDKHDPCRCSSTAHRPPQPR----------VCTFSPQRVSPTTSPRPASP 307
L+ +L K+DPCR + + + + F P+ S R ASP
Sbjct: 5431 ALDEFLVKNDPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSRPSSRGASP 5485
>gi|34577047 dystonin isoform 1 [Homo sapiens]
Length = 5497
Score = 68.9 bits (167), Expect = 6e-12
Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 17/115 (14%)
Query: 209 DELVREILGRCTCPDQFPMIKVSEGKYRV------GDSSLLIFVRVLRSHVMVRVGGGWD 262
DE+ R++ +C C +F + ++ + KYR GDS L VR+LRS VMVRVGGGW
Sbjct: 5194 DEVTRQV-AKCKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILRSTVMVRVGGGWM 5252
Query: 263 TLEHYLDKHDPCRCSSTAHRPPQPR----------VCTFSPQRVSPTTSPRPASP 307
L+ +L K+DPCR + + + + F P+ S R ASP
Sbjct: 5253 ALDEFLVKNDPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSRPSSRGASP 5307
>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
Length = 5171
Score = 68.9 bits (167), Expect = 6e-12
Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 17/115 (14%)
Query: 209 DELVREILGRCTCPDQFPMIKVSEGKYRV------GDSSLLIFVRVLRSHVMVRVGGGWD 262
DE+ R++ +C C +F + ++ + KYR GDS L VR+LRS VMVRVGGGW
Sbjct: 4868 DEVTRQV-AKCKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILRSTVMVRVGGGWM 4926
Query: 263 TLEHYLDKHDPCRCSSTAHRPPQPR----------VCTFSPQRVSPTTSPRPASP 307
L+ +L K+DPCR + + + + F P+ S R ASP
Sbjct: 4927 ALDEFLVKNDPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSRPSSRGASP 4981
>gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo
sapiens]
Length = 359
Score = 35.8 bits (81), Expect = 0.056
Identities = 26/77 (33%), Positives = 31/77 (40%), Gaps = 11/77 (14%)
Query: 261 WDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSER--RGSRP 318
W L + DP S+ H P +P PQ V P RP+ P PGSE GS P
Sbjct: 96 WRELTLPVSPADPAAPPSSPHAPTRP-----PPQAVQP----RPSEPTPGSEALPPGSLP 146
Query: 319 EMTPVSLRSTKEGPETP 335
E R + P P
Sbjct: 147 EAAQPPSRPAAQPPSRP 163
>gi|163310745 LIM and calponin homology domains 1 isoform c [Homo
sapiens]
Length = 1056
Score = 35.8 bits (81), Expect = 0.056
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 24/137 (17%)
Query: 1 MADPVAGIAGSAAKSVRPFRSSE-AYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATG 59
MA P G+ A + ++P E A+ EA K W+ + G G F TGL G
Sbjct: 1 MACPALGL--EALQPLQPEPPPEPAFSEAQK-----WIEQVTGRSF--GDKDFRTGLENG 51
Query: 60 TTLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEV 119
LC+ NA+ + + +P DN+ F+ C+ ELG+ E
Sbjct: 52 ILLCELLNAIKPG-------------LVKKINRLPTPIAGLDNIILFLRGCK-ELGLKES 97
Query: 120 LMFETEDLVLRKNEKSV 136
+F+ DL N +V
Sbjct: 98 QLFDPSDLQDTSNRVTV 114
>gi|163310743 LIM and calponin homology domains 1 isoform b [Homo
sapiens]
Length = 1057
Score = 35.8 bits (81), Expect = 0.056
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 24/137 (17%)
Query: 1 MADPVAGIAGSAAKSVRPFRSSE-AYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATG 59
MA P G+ A + ++P E A+ EA K W+ + G G F TGL G
Sbjct: 1 MACPALGL--EALQPLQPEPPPEPAFSEAQK-----WIEQVTGRSF--GDKDFRTGLENG 51
Query: 60 TTLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEV 119
LC+ NA+ + + +P DN+ F+ C+ ELG+ E
Sbjct: 52 ILLCELLNAIKPG-------------LVKKINRLPTPIAGLDNIILFLRGCK-ELGLKES 97
Query: 120 LMFETEDLVLRKNEKSV 136
+F+ DL N +V
Sbjct: 98 QLFDPSDLQDTSNRVTV 114
>gi|163310741 LIM and calponin homology domains 1 isoform a [Homo
sapiens]
Length = 1083
Score = 35.8 bits (81), Expect = 0.056
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 24/137 (17%)
Query: 1 MADPVAGIAGSAAKSVRPFRSSE-AYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATG 59
MA P G+ A + ++P E A+ EA K W+ + G G F TGL G
Sbjct: 1 MACPALGL--EALQPLQPEPPPEPAFSEAQK-----WIEQVTGRSF--GDKDFRTGLENG 51
Query: 60 TTLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEV 119
LC+ NA+ + + +P DN+ F+ C+ ELG+ E
Sbjct: 52 ILLCELLNAIKPG-------------LVKKINRLPTPIAGLDNIILFLRGCK-ELGLKES 97
Query: 120 LMFETEDLVLRKNEKSV 136
+F+ DL N +V
Sbjct: 98 QLFDPSDLQDTSNRVTV 114
>gi|61835232 growth differentiation factor 7 preproprotein [Homo
sapiens]
Length = 450
Score = 35.8 bits (81), Expect = 0.056
Identities = 26/56 (46%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 46 PGGGDGFLTGLATGTTLCQHANAVTEAARALAAARPAR---GVAFQAHSVVPGSFM 98
PGGG G G G TL Q A A A A+ AR AR G F+ SVVP FM
Sbjct: 40 PGGGGG---GGGGGRTLAQAAGAAAVPAAAVPRARAARRAAGSGFRNGSVVPHHFM 92
>gi|17511255 poly(A) binding protein interacting protein 1 isoform 1
[Homo sapiens]
Length = 479
Score = 35.4 bits (80), Expect = 0.073
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 281 HRPPQPRVCTF--SPQRVSPTTSPRPASP--VPGSERRGSRPEMTPVSLRSTKEGPET 334
H+PPQP+ F P P T+P P + VP S +R SRP P R + P +
Sbjct: 43 HQPPQPKAPGFLQPPPLRQPRTTPPPGAQCEVPASPQRPSRPGALPEQTRPLRAPPSS 100
>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
Length = 379
Score = 35.4 bits (80), Expect = 0.073
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 8/69 (11%)
Query: 273 PCRCSSTAHRPPQPRVCTFS----PQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRST 328
P RC + PP PR T S P R +P P+ + SRP P L +
Sbjct: 137 PGRCPA----PPHPRESTTSFASAPPRPAPGLEPQRGPAASPPQEPSSRPPSPPAGLSTE 192
Query: 329 KEGPETPPR 337
GP T PR
Sbjct: 193 PAGPGTAPR 201
Score = 30.0 bits (66), Expect = 3.1
Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 12/62 (19%)
Query: 154 APRLVQFEQEIERELRAAPPAPNAPAAGEDTTETAPAPGTPARGPRMTPSDLR--NLDEL 211
APR Q E + P AP APAA T APA P DLR + D L
Sbjct: 199 APRPFLPGQPAEVDGNPPPAAPEAPAASPSTASPAPA----------APGDLRQEHFDRL 248
Query: 212 VR 213
+R
Sbjct: 249 IR 250
>gi|4506787 IQ motif containing GTPase activating protein 1 [Homo
sapiens]
Length = 1657
Score = 35.0 bits (79), Expect = 0.095
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 6/127 (4%)
Query: 31 EDLAEWLNALYGLGLPGGGDGFLTGLATGTTLCQHANAVTEAARALAAARPARGVAFQAH 90
E+ W+ A G LP + GL G L + N + +L ++A
Sbjct: 48 EEAKRWMEACLGEDLPPTTE-LEEGLRNGVYLAKLGNFFSPKVVSLKKIYDREQTRYKAT 106
Query: 91 SVVPGSFMARDNVATFIGWCRVELGVPEVLMFETEDLVLRKNEKSVVLCLLEVARRGARL 150
+ F DNV ++ E+G+P++ ET D+ RKN + C+ ++ +L
Sbjct: 107 GL---HFRHTDNVIQWLN-AMDEIGLPKIFYPETTDIYDRKNMPRCIYCIHALSLYLFKL 162
Query: 151 GLLAPRL 157
G LAP++
Sbjct: 163 G-LAPQI 168
>gi|191252814 RIMS binding protein 3B [Homo sapiens]
Length = 1639
Score = 34.7 bits (78), Expect = 0.12
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 275 RCSSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRP 318
+ S + RP P T +R+SP SP P P P + R+ S P
Sbjct: 304 KASKSEERPSSPDTSTPGSRRLSPPPSPLPPPPPPSAHRKLSNP 347
>gi|191252806 RIMS binding protein 3C [Homo sapiens]
Length = 1639
Score = 34.7 bits (78), Expect = 0.12
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 275 RCSSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRP 318
+ S + RP P T +R+SP SP P P P + R+ S P
Sbjct: 304 KASKSEERPSSPDTSTPGSRRLSPPPSPLPPPPPPSAHRKLSNP 347
>gi|153792195 DKFZP434H0735 protein [Homo sapiens]
Length = 1639
Score = 34.7 bits (78), Expect = 0.12
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 275 RCSSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRP 318
+ S + RP P T +R+SP SP P P P + R+ S P
Sbjct: 304 KASKSEERPSSPDTSTPGSRRLSPPPSPLPPPPPPSAHRKLSNP 347
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 34.3 bits (77), Expect = 0.16
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 282 RPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTP---VSLRSTKEGPETPP 336
RPP+P +P SP S P P P SR E+TP ++ +T + P+T P
Sbjct: 993 RPPRPAATRTAPPTPSPGPSASPGPPGPALTSDSSR-ELTPHSALTSEATSDAPDTSP 1049
>gi|19743875 fumarate hydratase precursor [Homo sapiens]
Length = 510
Score = 34.3 bits (77), Expect = 0.16
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 10/136 (7%)
Query: 134 KSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRA--------APPAPNAPAAGEDTT 185
K+ + + E+A G +G + F +++ ++ A AP A AA +
Sbjct: 263 KAAMPRIYELAAGGTAVGTGLNTRIGFAEKVAAKVAALTGLPFVTAPNKFEALAAHDALV 322
Query: 186 ETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQFPMIKVSEGKYRVG--DSSLL 243
E + A T A +D+R L R LG P+ P + GK ++ +
Sbjct: 323 ELSGAMNTTACSLMKIANDIRFLGSGPRSGLGELILPENEPGSSIMPGKVNPTQCEAMTM 382
Query: 244 IFVRVLRSHVMVRVGG 259
+ +V+ +HV V VGG
Sbjct: 383 VAAQVMGNHVAVTVGG 398
>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 389
Score = 33.5 bits (75), Expect = 0.28
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 11/64 (17%)
Query: 261 WDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSER--RGSRP 318
W L + DP S+ H P +P PQ V P RP+ P PGSE GS P
Sbjct: 96 WRELTLPVSPADPAAPPSSPHAPTRP-----PPQAVQP----RPSEPTPGSEALPPGSLP 146
Query: 319 EMTP 322
E P
Sbjct: 147 EGEP 150
>gi|239753114 PREDICTED: hypothetical protein [Homo sapiens]
Length = 322
Score = 33.5 bits (75), Expect = 0.28
Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Query: 144 ARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAAGEDTTETAPAPGTPARGPRMTPS 203
AR AR L +Q + I E PP P APA G + PA PAR P + P
Sbjct: 155 ARVRARASLALGLPIQCHRHISTE--PPPPPPAAPATGSAQSRPRPA---PARAPLIAPG 209
Query: 204 DLRNLDELVREILGRCTCP 222
++ L +LGR P
Sbjct: 210 AHQSAPPL--PVLGRLPAP 226
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,196,246
Number of Sequences: 37866
Number of extensions: 829603
Number of successful extensions: 7175
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 122
Number of HSP's that attempted gapping in prelim test: 6302
Number of HSP's gapped (non-prelim): 971
length of query: 337
length of database: 18,247,518
effective HSP length: 103
effective length of query: 234
effective length of database: 14,347,320
effective search space: 3357272880
effective search space used: 3357272880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.