Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 229577422
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|229577422 solute carrier family 39, member 11 isoform 1
[Homo sapiens]
(342 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|229577422 solute carrier family 39, member 11 isoform 1 [Homo... 669 0.0
gi|229577418 solute carrier family 39, member 11 isoform 2 [Homo... 649 0.0
gi|115430259 solute carrier family 39 (zinc transporter), member... 50 3e-06
gi|115430255 solute carrier family 39 (zinc transporter), member... 50 3e-06
gi|153252201 solute carrier family 39 (zinc transporter), member... 50 4e-06
gi|187936949 solute carrier family 39 (zinc transporter), member... 48 1e-05
gi|55741750 solute carrier family 39 (zinc transporter), member ... 48 1e-05
gi|156415986 solute carrier family 39 (zinc transporter), member... 47 3e-05
gi|205830405 solute carrier family 39 (zinc transporter), member... 46 4e-05
gi|153252214 solute carrier family 39 (zinc transporter), member... 45 1e-04
gi|206597541 solute carrier family 39 (metal ion transporter), m... 44 3e-04
gi|206597539 solute carrier family 39 (metal ion transporter), m... 44 3e-04
gi|21361423 solute carrier family 39 (zinc transporter), member ... 43 5e-04
gi|24586665 solute carrier family 39 (zinc transporter), member ... 42 8e-04
gi|205830407 solute carrier family 39 (zinc transporter), member... 42 8e-04
gi|205830403 solute carrier family 39 (zinc transporter), member... 42 8e-04
gi|40255101 solute carrier family 39 (zinc transporter), member ... 42 8e-04
gi|190014617 solute carrier family 39 (zinc transporter), member... 40 0.003
gi|205830424 solute carrier family 39 (zinc transporter), member... 38 0.011
gi|190360568 solute carrier family 39 (zinc transporter), member... 38 0.011
gi|190358541 solute carrier family 39 (zinc transporter), member... 38 0.011
gi|223633939 solute carrier family 39 (zinc transporter), member... 37 0.020
gi|149944536 ichthyin protein [Homo sapiens] 35 0.097
gi|117553619 solute carrier family 39, member 7 [Homo sapiens] 35 0.13
gi|117553608 solute carrier family 39, member 7 [Homo sapiens] 35 0.13
gi|205830426 solute carrier family 39 (zinc transporter), member... 35 0.13
gi|223633937 solute carrier family 39 (zinc transporter), member... 34 0.17
gi|84993742 tripartite motif-containing 71 [Homo sapiens] 31 1.4
gi|239754291 PREDICTED: hypothetical protein [Homo sapiens] 30 4.1
gi|239748828 PREDICTED: hypothetical protein XP_002346813 [Homo ... 30 4.1
>gi|229577422 solute carrier family 39, member 11 isoform 1 [Homo
sapiens]
Length = 342
Score = 669 bits (1726), Expect = 0.0
Identities = 342/342 (100%), Positives = 342/342 (100%)
Query: 1 MLQGHSSVFQALLGTFFTWGMTAAGAALVFVFSSGQRRILDGSLGFAAGVMLAASYWSLL 60
MLQGHSSVFQALLGTFFTWGMTAAGAALVFVFSSGQRRILDGSLGFAAGVMLAASYWSLL
Sbjct: 1 MLQGHSSVFQALLGTFFTWGMTAAGAALVFVFSSGQRRILDGSLGFAAGVMLAASYWSLL 60
Query: 61 APAVEMATSSGGFGAFAFFPVAVGFTLGAAFVYLADLLMPHLGAAEDPQTTLALNFGSTL 120
APAVEMATSSGGFGAFAFFPVAVGFTLGAAFVYLADLLMPHLGAAEDPQTTLALNFGSTL
Sbjct: 61 APAVEMATSSGGFGAFAFFPVAVGFTLGAAFVYLADLLMPHLGAAEDPQTTLALNFGSTL 120
Query: 121 MKKKSDPEGPALLFPESELSIRIGRAGLLSDKSENGEAYQRKKAAATGLPEGPAVPVPSR 180
MKKKSDPEGPALLFPESELSIRIGRAGLLSDKSENGEAYQRKKAAATGLPEGPAVPVPSR
Sbjct: 121 MKKKSDPEGPALLFPESELSIRIGRAGLLSDKSENGEAYQRKKAAATGLPEGPAVPVPSR 180
Query: 181 GNLAQPGGSSWRRIALLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQ 240
GNLAQPGGSSWRRIALLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQ
Sbjct: 181 GNLAQPGGSSWRRIALLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQ 240
Query: 241 NFPEGLAVSLPLRGAGFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAG 300
NFPEGLAVSLPLRGAGFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAG
Sbjct: 241 NFPEGLAVSLPLRGAGFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAG 300
Query: 301 AMVYVVMDDIIPEAQISGNGKLASWASILGFVVMMSLDVGLG 342
AMVYVVMDDIIPEAQISGNGKLASWASILGFVVMMSLDVGLG
Sbjct: 301 AMVYVVMDDIIPEAQISGNGKLASWASILGFVVMMSLDVGLG 342
>gi|229577418 solute carrier family 39, member 11 isoform 2 [Homo
sapiens]
Length = 335
Score = 649 bits (1675), Expect = 0.0
Identities = 335/342 (97%), Positives = 335/342 (97%), Gaps = 7/342 (2%)
Query: 1 MLQGHSSVFQALLGTFFTWGMTAAGAALVFVFSSGQRRILDGSLGFAAGVMLAASYWSLL 60
MLQGHSSVFQALLGTFFTWGMTAAGAALVFVFSSGQRRILDGSLGFAAGVMLAASYWSLL
Sbjct: 1 MLQGHSSVFQALLGTFFTWGMTAAGAALVFVFSSGQRRILDGSLGFAAGVMLAASYWSLL 60
Query: 61 APAVEMATSSGGFGAFAFFPVAVGFTLGAAFVYLADLLMPHLGAAEDPQTTLALNFGSTL 120
APAVEMATSSGGFGAFAFFPVAVGFTLGAAFVYLADLLMPHLGAAEDPQTTLALNFGSTL
Sbjct: 61 APAVEMATSSGGFGAFAFFPVAVGFTLGAAFVYLADLLMPHLGAAEDPQTTLALNFGSTL 120
Query: 121 MKKKSDPEGPALLFPESELSIRIGRAGLLSDKSENGEAYQRKKAAATGLPEGPAVPVPSR 180
MKKKSDPEGPALLFPESELSIRI DKSENGEAYQRKKAAATGLPEGPAVPVPSR
Sbjct: 121 MKKKSDPEGPALLFPESELSIRI-------DKSENGEAYQRKKAAATGLPEGPAVPVPSR 173
Query: 181 GNLAQPGGSSWRRIALLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQ 240
GNLAQPGGSSWRRIALLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQ
Sbjct: 174 GNLAQPGGSSWRRIALLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQ 233
Query: 241 NFPEGLAVSLPLRGAGFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAG 300
NFPEGLAVSLPLRGAGFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAG
Sbjct: 234 NFPEGLAVSLPLRGAGFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAG 293
Query: 301 AMVYVVMDDIIPEAQISGNGKLASWASILGFVVMMSLDVGLG 342
AMVYVVMDDIIPEAQISGNGKLASWASILGFVVMMSLDVGLG
Sbjct: 294 AMVYVVMDDIIPEAQISGNGKLASWASILGFVVMMSLDVGLG 335
>gi|115430259 solute carrier family 39 (zinc transporter), member 4
isoform 1 [Homo sapiens]
Length = 622
Score = 50.1 bits (118), Expect = 3e-06
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 196 LLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGA 255
++ L +HN +GLAVG F + KT AT ++ + P L L A
Sbjct: 474 MITLGDAVHNFADGLAVGAAFASSWKTGLAT-------SLAVFCHELPHELGDFAALLHA 526
Query: 256 GFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAGAMVYVVMDDIIP 312
G S +A L+ + AG++ A AV ++E + LA A G +YV + D++P
Sbjct: 527 GLSVRQALLLN-LASALTAFAGLYVALAVGVSEESEAWILAVATGLFLYVALCDMLP 582
>gi|115430255 solute carrier family 39 (zinc transporter), member 4
isoform 2 [Homo sapiens]
Length = 647
Score = 50.1 bits (118), Expect = 3e-06
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 196 LLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGA 255
++ L +HN +GLAVG F + KT AT ++ + P L L A
Sbjct: 499 MITLGDAVHNFADGLAVGAAFASSWKTGLAT-------SLAVFCHELPHELGDFAALLHA 551
Query: 256 GFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAGAMVYVVMDDIIP 312
G S +A L+ + AG++ A AV ++E + LA A G +YV + D++P
Sbjct: 552 GLSVRQALLLN-LASALTAFAGLYVALAVGVSEESEAWILAVATGLFLYVALCDMLP 607
>gi|153252201 solute carrier family 39 (zinc transporter), member 6
isoform 1 [Homo sapiens]
Length = 755
Score = 49.7 bits (117), Expect = 4e-06
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 17/154 (11%)
Query: 196 LLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGA 255
++I+ +HN +GLA+G F + S + ++ + P L L A
Sbjct: 598 MVIMGDGLHNFSDGLAIGAAF-------TEGLSSGLSTSVAVFCHELPHELGDFAVLLKA 650
Query: 256 GFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAGAMVYVVMDDIIPEA- 314
G + +A Y LS M+ L G F AE + + A AG +YV + D++PE
Sbjct: 651 GMTVKQAVLYNALSAMLAYLGMATGIFIGHYAENVSMWIFALTAGLFMYVALVDMVPEML 710
Query: 315 --QISGNG-------KLASWASILGFVVMMSLDV 339
S +G L + +LGF +M+ + +
Sbjct: 711 HNDASDHGCSRWGYFFLQNAGMLLGFGIMLLISI 744
>gi|187936949 solute carrier family 39 (zinc transporter), member 10
[Homo sapiens]
Length = 831
Score = 47.8 bits (112), Expect = 1e-05
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 8/125 (6%)
Query: 196 LLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGA 255
++I+ IHN +GLA+G F SA + +I + P L L A
Sbjct: 672 MVIMGDGIHNFSDGLAIGAAF-------SAGLTGGISTSIAVFCHELPHELGDFAVLLKA 724
Query: 256 GFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAGAMVYVVMDDIIPEAQ 315
G + +A Y LS M+ + + G A I + A AG +YV + D++PE
Sbjct: 725 GMTVKQAIVYNLLSAMMAYIGMLIGTAVGQYANNITLWIFAVTAGMFLYVALVDMLPE-M 783
Query: 316 ISGNG 320
+ G+G
Sbjct: 784 LHGDG 788
>gi|55741750 solute carrier family 39 (zinc transporter), member 10
[Homo sapiens]
Length = 831
Score = 47.8 bits (112), Expect = 1e-05
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 8/125 (6%)
Query: 196 LLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGA 255
++I+ IHN +GLA+G F SA + +I + P L L A
Sbjct: 672 MVIMGDGIHNFSDGLAIGAAF-------SAGLTGGISTSIAVFCHELPHELGDFAVLLKA 724
Query: 256 GFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAGAMVYVVMDDIIPEAQ 315
G + +A Y LS M+ + + G A I + A AG +YV + D++PE
Sbjct: 725 GMTVKQAIVYNLLSAMMAYIGMLIGTAVGQYANNITLWIFAVTAGMFLYVALVDMLPE-M 783
Query: 316 ISGNG 320
+ G+G
Sbjct: 784 LHGDG 788
>gi|156415986 solute carrier family 39 (zinc transporter), member 2
[Homo sapiens]
Length = 309
Score = 46.6 bits (109), Expect = 3e-05
Identities = 65/268 (24%), Positives = 110/268 (41%), Gaps = 30/268 (11%)
Query: 81 VAVGFTLGAAFVYLADLLMPHLGAAEDPQTTLALNFGSTLMKKKSDPEGPALLFPESELS 140
++ G LGA F+++ + + + Q + N ++ D + + +P EL
Sbjct: 51 ISAGVFLGAGFMHMTAEALEEIES--QIQKFMVQNRSASERNSSGDADSAHMEYPYGELI 108
Query: 141 IRIGRAGLLSDKSENGEAYQRKKAAATGLPE----GPAVPVPSRGNLAQPGGSSWRRIAL 196
I +G + +S + +T E + S G+L P R + L
Sbjct: 109 ISLGFFFVFFLESLALQCCPGAAGGSTVQDEEWGGAHIFELHSHGHLPSPSKGPLRALVL 168
Query: 197 LILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGAG 256
L L+++ H+V EGLAVG ++ T +AT + + G+ F V + L G
Sbjct: 169 L-LSLSFHSVFEGLAVG-----LQPTVAATVQLCLAVLAHKGLVVF----GVGMRLVHLG 218
Query: 257 FSTWRAFWYGQLSGMVEPLAGVFGAFAVV---------LAEPILPYALAFAAGAMVYVVM 307
S+ A + L ++ PL G+ AV LA+ +L AAG +YV
Sbjct: 219 TSSRWAVFSILLLALMSPL-GLAVGLAVTGGDSEGGRGLAQAVLE---GVAAGTFLYVTF 274
Query: 308 DDIIPEAQISGNGKLASWASI-LGFVVM 334
+I+P S LA W+ + GF M
Sbjct: 275 LEILPRELASPEAPLAKWSCVAAGFAFM 302
>gi|205830405 solute carrier family 39 (zinc transporter), member 8
isoform b [Homo sapiens]
Length = 444
Score = 46.2 bits (108), Expect = 4e-05
Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 17/147 (11%)
Query: 183 LAQPGGSSWRRIALLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGI--Q 240
L++ G +W ++ L +HN +GLA+G AS T + L+ I I +
Sbjct: 297 LSEIGTIAW----MITLCDALHNFIDGLAIG---------ASCTLSLLQGLSTSIAILCE 343
Query: 241 NFPEGLAVSLPLRGAGFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAG 300
FP L + L AG ST +A + LS + FG P + +ALA G
Sbjct: 344 EFPHELGDFVILLNAGMSTRQALLFNFLSACSCYVGLAFGILVGNNFAPNIIFALA--GG 401
Query: 301 AMVYVVMDDIIPEAQISGNGKLASWAS 327
+Y+ + D+ PE K+ WA+
Sbjct: 402 MFLYISLADMFPEMNDMLREKIIKWAT 428
>gi|153252214 solute carrier family 39 (zinc transporter), member 6
isoform 2 [Homo sapiens]
Length = 433
Score = 44.7 bits (104), Expect = 1e-04
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 7/116 (6%)
Query: 196 LLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGA 255
++I+ +HN +GLA+G F + S + ++ + P L L A
Sbjct: 323 MVIMGDGLHNFSDGLAIGAAF-------TEGLSSGLSTSVAVFCHELPHELGDFAVLLKA 375
Query: 256 GFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAGAMVYVVMDDII 311
G + +A Y LS M+ L G F AE + + A AG +YV + D++
Sbjct: 376 GMTVKQAVLYNALSAMLAYLGMATGIFIGHYAENVSMWIFALTAGLFMYVALVDMV 431
>gi|206597541 solute carrier family 39 (metal ion transporter),
member 5 [Homo sapiens]
Length = 540
Score = 43.5 bits (101), Expect = 3e-04
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 7/117 (5%)
Query: 196 LLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGA 255
+++L +HN+ +GLA+G F S F S + + + P L L +
Sbjct: 386 MVLLGDGLHNLTDGLAIGAAF-------SDGFSSGLSTTLAVFCHELPHELGDFAMLLQS 438
Query: 256 GFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAGAMVYVVMDDIIP 312
G S R +SG + V G + P+ P+ AG +YV + D++P
Sbjct: 439 GLSFRRLLLLSLVSGALGLGGAVLGVGLSLGPVPLTPWVFGVTAGVFLYVALVDMLP 495
>gi|206597539 solute carrier family 39 (metal ion transporter),
member 5 [Homo sapiens]
Length = 540
Score = 43.5 bits (101), Expect = 3e-04
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 7/117 (5%)
Query: 196 LLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGA 255
+++L +HN+ +GLA+G F S F S + + + P L L +
Sbjct: 386 MVLLGDGLHNLTDGLAIGAAF-------SDGFSSGLSTTLAVFCHELPHELGDFAMLLQS 438
Query: 256 GFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAGAMVYVVMDDIIP 312
G S R +SG + V G + P+ P+ AG +YV + D++P
Sbjct: 439 GLSFRRLLLLSLVSGALGLGGAVLGVGLSLGPVPLTPWVFGVTAGVFLYVALVDMLP 495
>gi|21361423 solute carrier family 39 (zinc transporter), member 1
[Homo sapiens]
Length = 324
Score = 42.7 bits (99), Expect = 5e-04
Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 22/174 (12%)
Query: 171 EGPAVPVPSRGNLAQPGGSSWRRIALLILAITIHNVPEGLAVGVGFGAIEKTASATFESA 230
+GP VP S P S R +L+ ++ +H+V EGLAVG +++ + E
Sbjct: 161 DGPGVPQAS----GAPATPSALRACVLVFSLALHSVFEGLAVG-----LQRDRARAMELC 211
Query: 231 RNLAIGIGIQNFPEGLAVSLPLR--GAGFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAE 288
L + GI LAVSL LR + G L + PL GA A
Sbjct: 212 LALLLHKGI------LAVSLSLRLLQSHLRAQVVAGCGILFSCMTPLGIGLGAALAESAG 265
Query: 289 PILPYALA----FAAGAMVYVVMDDIIPEAQISGNGKLASWASIL-GFVVMMSL 337
P+ A + AAG +Y+ +I+P+ S ++ +L GF ++ L
Sbjct: 266 PLHQLAQSVLEGMAAGTFLYITFLEILPQELASSEQRILKVILLLAGFALLTGL 319
>gi|24586665 solute carrier family 39 (zinc transporter), member 8
isoform a [Homo sapiens]
Length = 460
Score = 42.0 bits (97), Expect = 8e-04
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Query: 183 LAQPGGSSWRRIALLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGI--Q 240
L++ G +W ++ L +HN +GLA+G AS T + L+ I I +
Sbjct: 297 LSEIGTIAW----MITLCDALHNFIDGLAIG---------ASCTLSLLQGLSTSIAILCE 343
Query: 241 NFPEGLAVSLPLRGAGFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYAL-AFAA 299
FP L + L AG ST +A + LS V AF +++ P + A A
Sbjct: 344 EFPHELGDFVILLNAGMSTRQALLFNFLSAC---SCYVGLAFGILVGNNFAPNIIFALAG 400
Query: 300 GAMVYVVMDDIIPE 313
G +Y+ + D+ PE
Sbjct: 401 GMFLYISLADMFPE 414
>gi|205830407 solute carrier family 39 (zinc transporter), member 8
isoform c [Homo sapiens]
Length = 393
Score = 42.0 bits (97), Expect = 8e-04
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Query: 183 LAQPGGSSWRRIALLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGI--Q 240
L++ G +W ++ L +HN +GLA+G AS T + L+ I I +
Sbjct: 230 LSEIGTIAW----MITLCDALHNFIDGLAIG---------ASCTLSLLQGLSTSIAILCE 276
Query: 241 NFPEGLAVSLPLRGAGFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYAL-AFAA 299
FP L + L AG ST +A + LS V AF +++ P + A A
Sbjct: 277 EFPHELGDFVILLNAGMSTRQALLFNFLSAC---SCYVGLAFGILVGNNFAPNIIFALAG 333
Query: 300 GAMVYVVMDDIIPE 313
G +Y+ + D+ PE
Sbjct: 334 GMFLYISLADMFPE 347
>gi|205830403 solute carrier family 39 (zinc transporter), member 8
isoform a [Homo sapiens]
Length = 460
Score = 42.0 bits (97), Expect = 8e-04
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Query: 183 LAQPGGSSWRRIALLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGI--Q 240
L++ G +W ++ L +HN +GLA+G AS T + L+ I I +
Sbjct: 297 LSEIGTIAW----MITLCDALHNFIDGLAIG---------ASCTLSLLQGLSTSIAILCE 343
Query: 241 NFPEGLAVSLPLRGAGFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYAL-AFAA 299
FP L + L AG ST +A + LS V AF +++ P + A A
Sbjct: 344 EFPHELGDFVILLNAGMSTRQALLFNFLSAC---SCYVGLAFGILVGNNFAPNIIFALAG 400
Query: 300 GAMVYVVMDDIIPE 313
G +Y+ + D+ PE
Sbjct: 401 GMFLYISLADMFPE 414
>gi|40255101 solute carrier family 39 (zinc transporter), member 13
isoform b [Homo sapiens]
Length = 364
Score = 42.0 bits (97), Expect = 8e-04
Identities = 52/177 (29%), Positives = 73/177 (41%), Gaps = 29/177 (16%)
Query: 151 DKSENGEAYQRKK---AAATGLPEGPAVPVPSRGNLAQPG-GSSWRRIA----LLILAIT 202
D E G + K AAA L G + P+ A+PG G+ R I L +LA T
Sbjct: 171 DSKEEGTSQAPNKDPTAAAAALNGGHCLAQPA----AEPGLGAVVRSIKVSGYLNLLANT 226
Query: 203 IHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGAGFSTWRA 262
I N GLAV F +K T + I + P + L AGF W A
Sbjct: 227 IDNFTHGLAVAASFLVSKKIGLLT-------TMAILLHEIPHEVGDFAILLRAGFDRWSA 279
Query: 263 FWYGQLSGMVEPLAGVFGA-FAVVLAEP-----ILPYALAFAAGAMVYVVMDDIIPE 313
QLS L G+ GA FA+ P + L F +G +Y+ + +++P+
Sbjct: 280 AKL-QLS---TALGGLLGAGFAICTQSPKGVEETAAWVLPFTSGGFLYIALVNVLPD 332
>gi|190014617 solute carrier family 39 (zinc transporter), member 13
isoform a [Homo sapiens]
Length = 371
Score = 40.0 bits (92), Expect = 0.003
Identities = 53/184 (28%), Positives = 74/184 (40%), Gaps = 36/184 (19%)
Query: 151 DKSENGEAYQRKK---AAATGLPEGPAVPVPSRGNLAQPG-GSSWRRIA----LLILAIT 202
D E G + K AAA L G + P+ A+PG G+ R I L +LA T
Sbjct: 171 DSKEEGTSQAPNKDPTAAAAALNGGHCLAQPA----AEPGLGAVVRSIKVSGYLNLLANT 226
Query: 203 IHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGAGFSTWRA 262
I N GLAV F +K T + I + P + L AGF W A
Sbjct: 227 IDNFTHGLAVAASFLVSKKIGLLT-------TMAILLHEIPHEVGDFAILLRAGFDRWSA 279
Query: 263 FWYGQLSGMVEPLAGVFGA-FAVVL------------AEPILPYALAFAAGAMVYVVMDD 309
QLS L G+ GA FA+ AE + L F +G +Y+ + +
Sbjct: 280 AKL-QLS---TALGGLLGAGFAICTQSPKGVVGCSPAAEETAAWVLPFTSGGFLYIALVN 335
Query: 310 IIPE 313
++P+
Sbjct: 336 VLPD 339
>gi|205830424 solute carrier family 39 (zinc transporter), member 14
isoform a [Homo sapiens]
Length = 492
Score = 38.1 bits (87), Expect = 0.011
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 9/118 (7%)
Query: 196 LLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGA 255
++ L+ +HN +GLA+G F + + + ++ I + FP L + L A
Sbjct: 339 MITLSDGLHNFIDGLAIGASF-------TVSVFQGISTSVAILCEEFPHELGDFVILLNA 391
Query: 256 GFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAGAMVYVVMDDIIPE 313
G S +A ++ LS L FG A + + A A G +Y+ + D+ PE
Sbjct: 392 GMSIQQALFFNFLSACCCYLGLAFGILAG--SHFSANWIFALAGGMFLYISLADMFPE 447
>gi|190360568 solute carrier family 39 (zinc transporter), member 14
isoform a [Homo sapiens]
Length = 492
Score = 38.1 bits (87), Expect = 0.011
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 9/118 (7%)
Query: 196 LLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGA 255
++ L+ +HN +GLA+G F + + + ++ I + FP L + L A
Sbjct: 339 MITLSDGLHNFIDGLAIGASF-------TVSVFQGISTSVAILCEEFPHELGDFVILLNA 391
Query: 256 GFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAGAMVYVVMDDIIPE 313
G S +A ++ LS L FG A + + A A G +Y+ + D+ PE
Sbjct: 392 GMSIQQALFFNFLSACCCYLGLAFGILAG--SHFSANWIFALAGGMFLYISLADMFPE 447
>gi|190358541 solute carrier family 39 (zinc transporter), member 14
isoform b [Homo sapiens]
Length = 492
Score = 38.1 bits (87), Expect = 0.011
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 9/118 (7%)
Query: 196 LLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGA 255
++ L+ +HN +GLA+G F + + + ++ I + FP L + L A
Sbjct: 339 MITLSDGLHNFIDGLAIGASF-------TVSVFQGISTSVAILCEEFPHELGDFVILLNA 391
Query: 256 GFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAGAMVYVVMDDIIPE 313
G S +A ++ LS L FG A + + A A G +Y+ + D+ PE
Sbjct: 392 GMSIQQALFFNFLSACCCYLGLAFGILAG--SHFSANWIFALAGGMFLYISLADMFPE 447
>gi|223633939 solute carrier family 39 (zinc transporter), member 12
isoform 1 [Homo sapiens]
Length = 691
Score = 37.4 bits (85), Expect = 0.020
Identities = 40/177 (22%), Positives = 72/177 (40%), Gaps = 14/177 (7%)
Query: 143 IGRAGLLSDKSENGEAYQRKKAAATGLPEGPAVPVPSRGNLAQPGGSSWRRIALLILAIT 202
+G + L+ SE + R K+A+T + P + + S+ + A+ +LAI
Sbjct: 484 VGHSHHLALNSELSDQAGRGKSASTIQLKSPEDSQAAEMPIGSMTASNRKCKAISLLAIM 543
Query: 203 I------HNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGAG 256
I HN +GLA+G F S++ ES I I P + L +G
Sbjct: 544 ILVGDSLHNFADGLAIGAAF-------SSSSESGVTTTIAILCHEIPHEMGDFAVLLSSG 596
Query: 257 FSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAGAMVYVVMDDIIPE 313
S A +S + G++ +V + + AG +Y+ + +++PE
Sbjct: 597 LSMKTAILMNFISSLT-AFMGLYIGLSVSADPCVQDWIFTVTAGMFLYLSLVEMLPE 652
>gi|149944536 ichthyin protein [Homo sapiens]
Length = 466
Score = 35.0 bits (79), Expect = 0.097
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 28 LVFVFSSGQRRILDGSLGFAAGVMLAASYWSLLAPAVEMATSSGGFGAFAFFPVAVGFTL 87
L+ + ++G R +DG G+ M A + ++ A V FGA+AF P V L
Sbjct: 143 LLRLVATGATRAVDGGFGYLKDAMWWAGFLTMAAGEV------ANFGAYAFAPATVVTPL 196
Query: 88 GAAFVYLADLL 98
GA V ++ +L
Sbjct: 197 GALSVLISAIL 207
>gi|117553619 solute carrier family 39, member 7 [Homo sapiens]
Length = 469
Score = 34.7 bits (78), Expect = 0.13
Identities = 50/201 (24%), Positives = 78/201 (38%), Gaps = 28/201 (13%)
Query: 151 DKSENGEAYQRKKAAATGLPEGPAVPVPSRGNLAQPGGSSWRRIALLILAITI-HNVPEG 209
++ + Q+++ +T +GP P + + G R L LA + HN +G
Sbjct: 278 EEEKETRGVQKRRGGSTVPKDGPVRPQNAE---EEKRGLDLRVSGYLNLAADLAHNFTDG 334
Query: 210 LAVGVGFGAIEKTASATFESARNLAI----GIGIQNFPEGLAVSLPLRGAGFSTWRAFWY 265
LA+G A+F R L I + + P + L +G S +A
Sbjct: 335 LAIG-----------ASFRGGRGLGILTTMTVLLHEVPHEVGDFAILVQSGCSKKQAMRL 383
Query: 266 ------GQLSGMVEPLAGVFGAFAVVLAEPILP-YALAFAAGAMVYVVMDDIIPE--AQI 316
G L+G L GA +A P + L F AG +YV ++PE +
Sbjct: 384 QLLTAVGALAGTACALLTEGGAVGSEIAGGAGPGWVLPFTAGGFIYVATVSVLPELLREA 443
Query: 317 SGNGKLASWASILGFVVMMSL 337
S L +LG V+MM L
Sbjct: 444 SPLQSLLEVLGLLGGVIMMVL 464
>gi|117553608 solute carrier family 39, member 7 [Homo sapiens]
Length = 469
Score = 34.7 bits (78), Expect = 0.13
Identities = 50/201 (24%), Positives = 78/201 (38%), Gaps = 28/201 (13%)
Query: 151 DKSENGEAYQRKKAAATGLPEGPAVPVPSRGNLAQPGGSSWRRIALLILAITI-HNVPEG 209
++ + Q+++ +T +GP P + + G R L LA + HN +G
Sbjct: 278 EEEKETRGVQKRRGGSTVPKDGPVRPQNAE---EEKRGLDLRVSGYLNLAADLAHNFTDG 334
Query: 210 LAVGVGFGAIEKTASATFESARNLAI----GIGIQNFPEGLAVSLPLRGAGFSTWRAFWY 265
LA+G A+F R L I + + P + L +G S +A
Sbjct: 335 LAIG-----------ASFRGGRGLGILTTMTVLLHEVPHEVGDFAILVQSGCSKKQAMRL 383
Query: 266 ------GQLSGMVEPLAGVFGAFAVVLAEPILP-YALAFAAGAMVYVVMDDIIPE--AQI 316
G L+G L GA +A P + L F AG +YV ++PE +
Sbjct: 384 QLLTAVGALAGTACALLTEGGAVGSEIAGGAGPGWVLPFTAGGFIYVATVSVLPELLREA 443
Query: 317 SGNGKLASWASILGFVVMMSL 337
S L +LG V+MM L
Sbjct: 444 SPLQSLLEVLGLLGGVIMMVL 464
>gi|205830426 solute carrier family 39 (zinc transporter), member 14
isoform c [Homo sapiens]
Length = 481
Score = 34.7 bits (78), Expect = 0.13
Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 196 LLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGA 255
++ L+ +HN +GLA+G F + + + ++ I + FP L + L A
Sbjct: 339 MITLSDGLHNFIDGLAIGASF-------TVSVFQGISTSVAILCEEFPHELGDFVILLNA 391
Query: 256 GFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAGAMVYVVMDDIIPEAQ 315
G S +A ++ LS L FG A + + A A G +Y+ + D++
Sbjct: 392 GMSIQQALFFNFLSACCCYLGLAFGILAG--SHFSANWIFALAGGMFLYISLADMMEFCS 449
Query: 316 ISGNG 320
++ G
Sbjct: 450 VAQAG 454
>gi|223633937 solute carrier family 39 (zinc transporter), member 12
isoform 2 [Homo sapiens]
Length = 654
Score = 34.3 bits (77), Expect = 0.17
Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 8/118 (6%)
Query: 196 LLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQNFPEGLAVSLPLRGA 255
++++ ++HN +GLA+G F S++ ES I I P + L +
Sbjct: 506 MILVGDSLHNFADGLAIGAAF-------SSSSESGVTTTIAILCHEIPHEMGDFAVLLSS 558
Query: 256 GFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAGAMVYVVMDDIIPE 313
G S A +S + G++ +V + + AG +Y+ + +++PE
Sbjct: 559 GLSMKTAILMNFISSLT-AFMGLYIGLSVSADPCVQDWIFTVTAGMFLYLSLVEMLPE 615
>gi|84993742 tripartite motif-containing 71 [Homo sapiens]
Length = 868
Score = 31.2 bits (69), Expect = 1.4
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 144 GRAGLLSDKSENGEAYQRKKAAATGLPEGPAVPVPSRGNLAQPGGSSWRRIALLI 198
G G + + A+ R A+A LP+ P P PSR + PGG + ALL+
Sbjct: 142 GAGGHSNHRHHAHHAHPRASASAPPLPQAPQPPAPSR---SAPGGPAASPSALLL 193
>gi|239754291 PREDICTED: hypothetical protein [Homo sapiens]
Length = 153
Score = 29.6 bits (65), Expect = 4.1
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 148 LLSDKSENGEAYQRKKAAATGLPEGPAVPVPSRGNLAQPGGSSWRRIALLI 198
L +D + G++ + ++G P PA P+ S G P SW LL+
Sbjct: 62 LFTDALQAGQSRLLRTVTSSGTPTLPATPIRSSGVRGAPSRPSWLPCFLLL 112
>gi|239748828 PREDICTED: hypothetical protein XP_002346813 [Homo
sapiens]
Length = 153
Score = 29.6 bits (65), Expect = 4.1
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 148 LLSDKSENGEAYQRKKAAATGLPEGPAVPVPSRGNLAQPGGSSWRRIALLI 198
L +D + G++ + ++G P PA P+ S G P SW LL+
Sbjct: 62 LFTDALQAGQSRLLRTVTSSGTPTLPATPIRSSGVRGAPSRPSWLPCFLLL 112
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,278,555
Number of Sequences: 37866
Number of extensions: 557470
Number of successful extensions: 1651
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1578
Number of HSP's gapped (non-prelim): 65
length of query: 342
length of database: 18,247,518
effective HSP length: 103
effective length of query: 239
effective length of database: 14,347,320
effective search space: 3429009480
effective search space used: 3429009480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.