Search of human proteins with 229577315

Search of human proteins with 229577315

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|229577315 zona pellucida binding protein isoform 2 [Homo
sapiens]
         (350 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|229577315 zona pellucida binding protein isoform 2 [Homo sapi...   716   0.0  
gi|229577313 zona pellucida binding protein isoform 1 [Homo sapi...   711   0.0  
gi|40556389 zona pellucida binding protein 2 isoform 2 [Homo sap...   209   2e-54
gi|84875535 zona pellucida binding protein 2 isoform 1 [Homo sap...   202   4e-52
gi|139948432 adlican [Homo sapiens]                                    33   0.50 
gi|24429588 zinc finger protein 532 [Homo sapiens]                     32   1.1  
gi|153791466 AMIGO protein [Homo sapiens]                              32   1.1  
gi|110431348 deleted in colorectal carcinoma [Homo sapiens]            31   1.4  
gi|120587023 down-regulated in metastasis [Homo sapiens]               31   1.9  
gi|89036565 PREDICTED: similar to Temporarily Assigned Gene name...    31   1.9  
gi|13375646 leucine rich repeat and fibronectin type III domain ...    30   2.5  
gi|28373117 contactin 1 isoform 1 precursor [Homo sapiens]             30   2.5  
gi|28373119 contactin 1 isoform 2 precursor [Homo sapiens]             30   2.5  
gi|148922949 complement component (3b/4b) receptor 1-like [Homo ...    30   2.5  
gi|239754399 PREDICTED: hypothetical protein [Homo sapiens]            30   3.2  
gi|239748964 PREDICTED: hypothetical protein XP_002346869 [Homo ...    30   3.2  
gi|239742984 PREDICTED: hypothetical protein XP_002342711 [Homo ...    30   3.2  
gi|133925809 inter-alpha (globulin) inhibitor H3 preproprotein [...    30   3.2  
gi|4827022 contactin 2 precursor [Homo sapiens]                        30   4.2  
gi|81158226 neuronal cell adhesion molecule isoform A precursor ...    30   4.2  
gi|81158224 neuronal cell adhesion molecule isoform B precursor ...    30   4.2  
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac...    29   5.5  
gi|14591902 RecQ protein-like [Homo sapiens]                           29   5.5  
gi|14591904 RecQ protein-like [Homo sapiens]                           29   5.5  
gi|46411159 TEA domain family member 4 isoform 3 [Homo sapiens]        29   7.2  
gi|46411156 TEA domain family member 4 isoform 2 [Homo sapiens]        29   7.2  
gi|46411152 TEA domain family member 4 isoform 1 [Homo sapiens]        29   7.2  
gi|75709184 contactin 3 [Homo sapiens]                                 29   7.2  
gi|221316650 ephrin receptor EphA1 [Homo sapiens]                      28   9.4  
gi|153791330 leucine rich repeat neuronal 1 [Homo sapiens]             28   9.4  

>gi|229577315 zona pellucida binding protein isoform 2 [Homo
           sapiens]
          Length = 350

 Score =  716 bits (1848), Expect = 0.0
 Identities = 350/350 (100%), Positives = 350/350 (100%)

Query: 1   MEAFALGPARRGRRRTRAAGSLLSRAAILLFISAFLVRVPSSVGHLVRLPRAFRLTKDSV 60
           MEAFALGPARRGRRRTRAAGSLLSRAAILLFISAFLVRVPSSVGHLVRLPRAFRLTKDSV
Sbjct: 1   MEAFALGPARRGRRRTRAAGSLLSRAAILLFISAFLVRVPSSVGHLVRLPRAFRLTKDSV 60

Query: 61  KIVGSTSFPVKAYVMLHQKSPHVLCVTQQLRNAELIDPSFQWYGPKGKVVSENRTAQITS 120
           KIVGSTSFPVKAYVMLHQKSPHVLCVTQQLRNAELIDPSFQWYGPKGKVVSENRTAQITS
Sbjct: 61  KIVGSTSFPVKAYVMLHQKSPHVLCVTQQLRNAELIDPSFQWYGPKGKVVSENRTAQITS 120

Query: 121 TGSLVFQNFEESMSGIYTCFLEYKPTVEEIVKRLQLKYAIYAYREPHYYYQFTARYHAAP 180
           TGSLVFQNFEESMSGIYTCFLEYKPTVEEIVKRLQLKYAIYAYREPHYYYQFTARYHAAP
Sbjct: 121 TGSLVFQNFEESMSGIYTCFLEYKPTVEEIVKRLQLKYAIYAYREPHYYYQFTARYHAAP 180

Query: 181 CNSIYNISFEKKLLQILSKLLLDLSCEISLLKSECHRVKMQRAGLQNELFFAFSVSSLDT 240
           CNSIYNISFEKKLLQILSKLLLDLSCEISLLKSECHRVKMQRAGLQNELFFAFSVSSLDT
Sbjct: 181 CNSIYNISFEKKLLQILSKLLLDLSCEISLLKSECHRVKMQRAGLQNELFFAFSVSSLDT 240

Query: 241 EKGPKRCTDHNCEPYKRLFKAKNLIERFFNQQVEILGRRAEQLPQIYYIEGTLQMVWINR 300
           EKGPKRCTDHNCEPYKRLFKAKNLIERFFNQQVEILGRRAEQLPQIYYIEGTLQMVWINR
Sbjct: 241 EKGPKRCTDHNCEPYKRLFKAKNLIERFFNQQVEILGRRAEQLPQIYYIEGTLQMVWINR 300

Query: 301 CFPGYGMNVQQHPKCPECCVICSPGSYNPRDGIHCLQCNSSLVYGAKTCL 350
           CFPGYGMNVQQHPKCPECCVICSPGSYNPRDGIHCLQCNSSLVYGAKTCL
Sbjct: 301 CFPGYGMNVQQHPKCPECCVICSPGSYNPRDGIHCLQCNSSLVYGAKTCL 350


>gi|229577313 zona pellucida binding protein isoform 1 [Homo
           sapiens]
          Length = 351

 Score =  711 bits (1836), Expect = 0.0
 Identities = 350/351 (99%), Positives = 350/351 (99%), Gaps = 1/351 (0%)

Query: 1   MEAFALGPARRGRRRTRAAGSLLSRAAILLFISAFLVRVPSSVGHLVRLPRAFRLTKDSV 60
           MEAFALGPARRGRRRTRAAGSLLSRAAILLFISAFLVRVPSSVGHLVRLPRAFRLTKDSV
Sbjct: 1   MEAFALGPARRGRRRTRAAGSLLSRAAILLFISAFLVRVPSSVGHLVRLPRAFRLTKDSV 60

Query: 61  KIVGSTSFPVKAYVMLHQKSPHVLCVTQQLRNAELIDPSFQWYGPKGKVVS-ENRTAQIT 119
           KIVGSTSFPVKAYVMLHQKSPHVLCVTQQLRNAELIDPSFQWYGPKGKVVS ENRTAQIT
Sbjct: 61  KIVGSTSFPVKAYVMLHQKSPHVLCVTQQLRNAELIDPSFQWYGPKGKVVSVENRTAQIT 120

Query: 120 STGSLVFQNFEESMSGIYTCFLEYKPTVEEIVKRLQLKYAIYAYREPHYYYQFTARYHAA 179
           STGSLVFQNFEESMSGIYTCFLEYKPTVEEIVKRLQLKYAIYAYREPHYYYQFTARYHAA
Sbjct: 121 STGSLVFQNFEESMSGIYTCFLEYKPTVEEIVKRLQLKYAIYAYREPHYYYQFTARYHAA 180

Query: 180 PCNSIYNISFEKKLLQILSKLLLDLSCEISLLKSECHRVKMQRAGLQNELFFAFSVSSLD 239
           PCNSIYNISFEKKLLQILSKLLLDLSCEISLLKSECHRVKMQRAGLQNELFFAFSVSSLD
Sbjct: 181 PCNSIYNISFEKKLLQILSKLLLDLSCEISLLKSECHRVKMQRAGLQNELFFAFSVSSLD 240

Query: 240 TEKGPKRCTDHNCEPYKRLFKAKNLIERFFNQQVEILGRRAEQLPQIYYIEGTLQMVWIN 299
           TEKGPKRCTDHNCEPYKRLFKAKNLIERFFNQQVEILGRRAEQLPQIYYIEGTLQMVWIN
Sbjct: 241 TEKGPKRCTDHNCEPYKRLFKAKNLIERFFNQQVEILGRRAEQLPQIYYIEGTLQMVWIN 300

Query: 300 RCFPGYGMNVQQHPKCPECCVICSPGSYNPRDGIHCLQCNSSLVYGAKTCL 350
           RCFPGYGMNVQQHPKCPECCVICSPGSYNPRDGIHCLQCNSSLVYGAKTCL
Sbjct: 301 RCFPGYGMNVQQHPKCPECCVICSPGSYNPRDGIHCLQCNSSLVYGAKTCL 351


>gi|40556389 zona pellucida binding protein 2 isoform 2 [Homo
           sapiens]
          Length = 338

 Score =  209 bits (533), Expect = 2e-54
 Identities = 118/320 (36%), Positives = 173/320 (54%), Gaps = 28/320 (8%)

Query: 47  VRLPRAFRLTKDSVKIVGSTSFPVKAYVMLHQKSPHVLCVTQQLRNAELIDPSFQWYGPK 106
           V+ PR F L      I G T  P K YV LHQ SP ++C+  +L   E++DP++ W GP 
Sbjct: 18  VQCPR-FTLFNKKGFIYGKTGQPDKIYVELHQNSPVLICMDFKLSKKEIVDPTYLWIGPN 76

Query: 107 GKVVSENRTAQITSTGSLVFQNFEESMSGIYTCFLEYK----PTVEEIVKRLQLKYAIYA 162
            K ++ N    IT TG L+ ++F E +SG+YTC L YK     T EE   + +  + ++A
Sbjct: 77  EKTLTGNNRINITETGQLMVKDFLEPLSGLYTCTLSYKTVKAETQEEKTVKKRYDFMVFA 136

Query: 163 YREPHYYYQFTARYHAAPCNSIYNISFEKKLLQILSKLLLDLSCEISLLKSECHRVKMQR 222
           YREP Y YQ   R+    C   YN  F + L +IL  L+ DLSC +     +CH V++  
Sbjct: 137 YREPDYSYQMAVRFTTRSCIGRYNDVFFRVLKKILDSLISDLSCHVIEPSYKCHSVEIPE 196

Query: 223 AGLQNELFFAFSVS------------SLDTEKGPKRCTDHNCEPYKRLFKAKNLIERFFN 270
            GL +ELF AF V+            S+D E      T+HN      + +A++ IE FF 
Sbjct: 197 HGLIHELFIAFQVNPFAPGWKGACNGSVDCED----TTNHN------ILQARDRIEDFFR 246

Query: 271 QQVEILGRRAEQ-LPQIYYIEGTLQMVWINRCFPGYGMNVQQHPKCPECCVICSPGSYNP 329
            Q  I      + LP +++++ +LQ+V ++ C PG+G N + H  C  CCV+CSP +++P
Sbjct: 247 SQAYIFYHNFNKTLPAMHFVDHSLQVVRLDSCRPGFGKNERLHSNCASCCVVCSPATFSP 306

Query: 330 RDGIHCLQCNSSLVYGAKTC 349
              + C  C S L YGAK+C
Sbjct: 307 DVNVTCQTCVSVLTYGAKSC 326


>gi|84875535 zona pellucida binding protein 2 isoform 1 [Homo
           sapiens]
          Length = 316

 Score =  202 bits (514), Expect = 4e-52
 Identities = 109/296 (36%), Positives = 163/296 (55%), Gaps = 27/296 (9%)

Query: 71  KAYVMLHQKSPHVLCVTQQLRNAELIDPSFQWYGPKGKVVSENRTAQITSTGSLVFQNFE 130
           K YV LHQ SP ++C+  +L   E++DP++ W GP  K ++ N    IT TG L+ ++F 
Sbjct: 19  KIYVELHQNSPVLICMDFKLSKKEIVDPTYLWIGPNEKTLTGNNRINITETGQLMVKDFL 78

Query: 131 ESMSGIYTCFLEYK----PTVEEIVKRLQLKYAIYAYREPHYYYQFTARYHAAPCNSIYN 186
           E +SG+YTC L YK     T EE   + +  + ++AYREP Y YQ   R+    C   YN
Sbjct: 79  EPLSGLYTCTLSYKTVKAETQEEKTVKKRYDFMVFAYREPDYSYQMAVRFTTRSCIGRYN 138

Query: 187 ISFEKKLLQILSKLLLDLSCEISLLKSECHRVKMQRAGLQNELFFAFSVS---------- 236
             F + L +IL  L+ DLSC +     +CH V++   GL +ELF AF V+          
Sbjct: 139 DVFFRVLKKILDSLISDLSCHVIEPSYKCHSVEIPEHGLIHELFIAFQVNPFAPGWKGAC 198

Query: 237 --SLDTEKGPKRCTDHNCEPYKRLFKAKNLIERFFNQQVEILGRRAEQ-LPQIYYIEGTL 293
             S+D E      T+HN      + +A++ IE FF  Q  I      + LP +++++ +L
Sbjct: 199 NGSVDCED----TTNHN------ILQARDRIEDFFRSQAYIFYHNFNKTLPAMHFVDHSL 248

Query: 294 QMVWINRCFPGYGMNVQQHPKCPECCVICSPGSYNPRDGIHCLQCNSSLVYGAKTC 349
           Q+V ++ C PG+G N + H  C  CCV+CSP +++P   + C  C S L YGAK+C
Sbjct: 249 QVVRLDSCRPGFGKNERLHSNCASCCVVCSPATFSPDVNVTCQTCVSVLTYGAKSC 304


>gi|139948432 adlican [Homo sapiens]
          Length = 2828

 Score = 32.7 bits (73), Expect = 0.50
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 98   PSFQWYGPKGKVV-SENRTAQITSTGSLVFQNFEESMSGIYTCFL 141
            P   W  P  KV+ + +   QI   G+L+ Q  + S SG YTC +
Sbjct: 2376 PKVTWLSPTNKVIPTSSEKYQIYQDGTLLIQKAQRSDSGNYTCLV 2420



 Score = 30.8 bits (68), Expect = 1.9
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 5/62 (8%)

Query: 98  PSFQWYGPKGKVVSE-----NRTAQITSTGSLVFQNFEESMSGIYTCFLEYKPTVEEIVK 152
           PS  W  P G ++       +    I S+G L  ++ E S SG+Y C  + +  ++ +V 
Sbjct: 509 PSIFWVLPDGSILKAPMDDPDSKFSILSSGWLRIKSMEPSDSGLYQCIAQVRDEMDRMVY 568

Query: 153 RL 154
           R+
Sbjct: 569 RV 570



 Score = 28.5 bits (62), Expect = 9.4
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 10/84 (11%)

Query: 95   LIDPSFQWYGPKGKVV--------SENRTAQ--ITSTGSLVFQNFEESMSGIYTCFLEYK 144
            L +P   W  P G +V        S  RT +  + + G+L F        G YTCF E +
Sbjct: 2270 LPNPEISWSLPDGSLVNSFMQSDDSGGRTKRYVVFNNGTLYFNEVGMREEGDYTCFAENQ 2329

Query: 145  PTVEEIVKRLQLKYAIYAYREPHY 168
               +E+  R+++  A    R   Y
Sbjct: 2330 VGKDEMRVRVKVVTAPATIRNKTY 2353


>gi|24429588 zinc finger protein 532 [Homo sapiens]
          Length = 1301

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 30/144 (20%), Positives = 53/144 (36%), Gaps = 29/144 (20%)

Query: 216 HRVKMQRAGLQNELFFAFSVS----SLDTEKGPKRCTDHN--CEPYKRLFKAKNLIERFF 269
           H V   ++G+   +  A S +    ++  ++ P +   H+  C     +F+ +  +   F
Sbjct: 714 HTVTKIQSGITGTVISAPSSTPITPAMPLDEDPSKLCRHSLKCLECNEVFQDETSLATHF 773

Query: 270 NQQVEILGRRAEQLPQIYYIEGTLQMVWINRCFPGYGMNVQQHPK---CPECCVICSPG- 325
            Q  +  G++   +          QM+  N+C       + QH     CPEC  IC    
Sbjct: 774 QQAADTSGQKTCTI---------CQMLLPNQCSYASHQRIHQHKSPYTCPECGAICRSVH 824

Query: 326 ----------SYNPRDGIHCLQCN 339
                      Y  R G  C+ CN
Sbjct: 825 FQTHVTKNCLHYTRRVGFRCVHCN 848


>gi|153791466 AMIGO protein [Homo sapiens]
          Length = 493

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)

Query: 102 WYGPKGKVVSE---NRTAQITSTGSLVFQNFEESMSGIYTCF 140
           W  P  + V +   N T  ++  GSL+FQ  +    G+YTC+
Sbjct: 301 WVTPSNERVLDEVTNGTVSVSKDGSLLFQQVQVEDGGVYTCY 342


>gi|110431348 deleted in colorectal carcinoma [Homo sapiens]
          Length = 1447

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 98  PSFQWYGPKGKVVSENRTAQITSTGSLVFQNFEESMSGIYTCFLEYK 144
           PSF W   +  +   ++   +    +L+  N  +  SG+YTC + YK
Sbjct: 269 PSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGMYTCVVTYK 315


>gi|120587023 down-regulated in metastasis [Homo sapiens]
          Length = 2785

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 32/156 (20%), Positives = 62/156 (39%), Gaps = 12/156 (7%)

Query: 124 LVFQNFEESMSGIYTCFLEYKPTVEEIVKRLQLKYAIYAYREPHYYYQFTARYHAAPCNS 183
           LV Q   +     Y  F E+  T+  I++    +   +A+    Y Y++  R      +S
Sbjct: 110 LVVQLARDLQMDFYPHFPEFFLTITSILETQDTELLEWAFTSLSYLYKYLWRLMVKDMSS 169

Query: 184 IYNISFEKKLLQILSKLLLDLSCEISLLKSECHRVKMQRAGLQNELFFAFSVSSLDTEKG 243
           IY+         + S LL      I    +E     M++   +N L   F++  LD +K 
Sbjct: 170 IYS---------MYSTLLAHKKLHIRNFAAESFTFLMRKVSDKNAL---FNLMFLDLDKH 217

Query: 244 PKRCTDHNCEPYKRLFKAKNLIERFFNQQVEILGRR 279
           P++        ++     +N+      Q V+++ R+
Sbjct: 218 PEKVEGVGQLLFEMCKGVRNMFHSCTGQAVKLILRK 253


>gi|89036565 PREDICTED: similar to Temporarily Assigned Gene name
           family member (tag-184) [Homo sapiens]
          Length = 2785

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 32/156 (20%), Positives = 62/156 (39%), Gaps = 12/156 (7%)

Query: 124 LVFQNFEESMSGIYTCFLEYKPTVEEIVKRLQLKYAIYAYREPHYYYQFTARYHAAPCNS 183
           LV Q   +     Y  F E+  T+  I++    +   +A+    Y Y++  R      +S
Sbjct: 110 LVVQLARDLQMDFYPHFPEFFLTITSILETQDTELLEWAFTSLSYLYKYLWRLMVKDMSS 169

Query: 184 IYNISFEKKLLQILSKLLLDLSCEISLLKSECHRVKMQRAGLQNELFFAFSVSSLDTEKG 243
           IY+         + S LL      I    +E     M++   +N L   F++  LD +K 
Sbjct: 170 IYS---------MYSTLLAHKKLHIRNFAAESFTFLMRKVSDKNAL---FNLMFLDLDKH 217

Query: 244 PKRCTDHNCEPYKRLFKAKNLIERFFNQQVEILGRR 279
           P++        ++     +N+      Q V+++ R+
Sbjct: 218 PEKVEGVGQLLFEMCKGVRNMFHSCTGQAVKLILRK 253


>gi|13375646 leucine rich repeat and fibronectin type III domain
           containing 3 [Homo sapiens]
          Length = 628

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 4/81 (4%)

Query: 63  VGSTSFPVKAYVMLHQKSPHVLCVTQQ--LRNAELIDPS--FQWYGPKGKVVSENRTAQI 118
           VG   F  +  V+ H+  P  +   +   LR   + DP    +W  P+G+++  +  A+ 
Sbjct: 286 VGEEEFVCEPPVVTHRSPPLAVPAGRPAALRCRAVGDPEPRVRWVSPQGRLLGNSSRARA 345

Query: 119 TSTGSLVFQNFEESMSGIYTC 139
              G+L     E    GI+TC
Sbjct: 346 FPNGTLELLVTEPGDGGIFTC 366


>gi|28373117 contactin 1 isoform 1 precursor [Homo sapiens]
          Length = 1018

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 98  PSFQWYGPKGKVVSENRTAQITSTGSLVFQNFEESMSGIYTCFLE 142
           P F W      +V+ +R   I   GSL   N   +  GIYTCF E
Sbjct: 444 PKFSWSKGTEWLVNSSRIL-IWEDGSLEINNITRNDGGIYTCFAE 487


>gi|28373119 contactin 1 isoform 2 precursor [Homo sapiens]
          Length = 1007

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 98  PSFQWYGPKGKVVSENRTAQITSTGSLVFQNFEESMSGIYTCFLE 142
           P F W      +V+ +R   I   GSL   N   +  GIYTCF E
Sbjct: 433 PKFSWSKGTEWLVNSSRIL-IWEDGSLEINNITRNDGGIYTCFAE 476


>gi|148922949 complement component (3b/4b) receptor 1-like [Homo
           sapiens]
          Length = 569

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 14/45 (31%)

Query: 300 RCFPGYGMNVQQHPKC----------PECCVICSPGSYNPRDGIH 334
           RC PG+GM    H KC          P C  +C P    P D +H
Sbjct: 257 RCQPGFGMKGPSHVKCQALNKWEPELPSCSRVCQP----PPDVLH 297


>gi|239754399 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 414

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 17/48 (35%), Positives = 24/48 (50%)

Query: 7   GPARRGRRRTRAAGSLLSRAAILLFISAFLVRVPSSVGHLVRLPRAFR 54
           G  RR RRR  AA +L +R  +LL + ++  R  +     V  PR  R
Sbjct: 259 GRKRRQRRRPAAAAALHARRRLLLLVKSYFARGGTGAEPGVTSPRGLR 306


>gi|239748964 PREDICTED: hypothetical protein XP_002346869 [Homo
           sapiens]
          Length = 414

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 17/48 (35%), Positives = 24/48 (50%)

Query: 7   GPARRGRRRTRAAGSLLSRAAILLFISAFLVRVPSSVGHLVRLPRAFR 54
           G  RR RRR  AA +L +R  +LL + ++  R  +     V  PR  R
Sbjct: 259 GRKRRQRRRPAAAAALHARRRLLLLVKSYFARGGTGAEPGVTSPRGLR 306


>gi|239742984 PREDICTED: hypothetical protein XP_002342711 [Homo
           sapiens]
          Length = 414

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 17/48 (35%), Positives = 24/48 (50%)

Query: 7   GPARRGRRRTRAAGSLLSRAAILLFISAFLVRVPSSVGHLVRLPRAFR 54
           G  RR RRR  AA +L +R  +LL + ++  R  +     V  PR  R
Sbjct: 259 GRKRRQRRRPAAAAALHARRRLLLLVKSYFARGGTGAEPGVTSPRGLR 306


>gi|133925809 inter-alpha (globulin) inhibitor H3 preproprotein
           [Homo sapiens]
          Length = 890

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 25/129 (19%), Positives = 52/129 (40%), Gaps = 6/129 (4%)

Query: 38  RVPSSVGHLVRLPRAFRLTKDSVKIVGSTSFPVKAYVMLHQKSPHVLCVTQQLRNAELID 97
           +V S   H V   RA      + ++      P  A++     +   +     ++  E+  
Sbjct: 53  KVTSRFAHNVVTMRAVNRADTAKEVSFDVELPKTAFITNFTLTIDGVTYPGNVKEKEVAK 112

Query: 98  PSFQWYGPKGKVVSENRTAQITSTGSLVFQNFEESMSGIYTCFLEYKPTVEEIVKRLQLK 157
             ++      K VS+ +TA +        + F  S++      + ++ T EE++KR + K
Sbjct: 113 KQYE------KAVSQGKTAGLVKASGRKLEKFTVSVNVAAGSKVTFELTYEELLKRHKGK 166

Query: 158 YAIYAYREP 166
           Y +Y   +P
Sbjct: 167 YEMYLKVQP 175


>gi|4827022 contactin 2 precursor [Homo sapiens]
          Length = 1040

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 8/60 (13%)

Query: 91  RNAELIDPSFQWYGPKGKVVSENRT--------AQITSTGSLVFQNFEESMSGIYTCFLE 142
           R  E++ P      PK  V+    T          +T  G+L+ +N   S  G YTCF E
Sbjct: 432 RGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAE 491


>gi|81158226 neuronal cell adhesion molecule isoform A precursor
           [Homo sapiens]
          Length = 1304

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 98  PSFQWY-GPKGKVVSENRTAQITSTGSLVFQNFEESMSGIYTCFLEYKPTVEEIVKRLQL 156
           P+ +W+ G KG  + E+    +   G+L     ++  +G YTC    K  + +    L++
Sbjct: 484 PTIEWFKGAKGSALHEDIYV-LHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 542

Query: 157 KYAIYAYREPHY 168
           K   +  ++P Y
Sbjct: 543 KDPTWIVKQPEY 554


>gi|81158224 neuronal cell adhesion molecule isoform B precursor
           [Homo sapiens]
          Length = 1183

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 98  PSFQWY-GPKGKVVSENRTAQITSTGSLVFQNFEESMSGIYTCFLEYKPTVEEIVKRLQL 156
           P+ +W+ G KG  + E+    +   G+L     ++  +G YTC    K  + +    L++
Sbjct: 478 PTIEWFKGAKGSALHEDIYV-LHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 536

Query: 157 KYAIYAYREPHY 168
           K   +  ++P Y
Sbjct: 537 KDPTWIVKQPEY 548


>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
            RhoGEF isoform b [Homo sapiens]
          Length = 7968

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 98   PSFQWYGPKGKVVSENRTAQIT--STGSLVFQNFEESMSGIYTCFLE 142
            PS  WY    ++V   R +Q    +T SLV ++     +G+YTC  +
Sbjct: 6386 PSVTWYKDSVQLVDSTRLSQQQEGTTYSLVLRHVASKDAGVYTCLAQ 6432


>gi|14591902 RecQ protein-like [Homo sapiens]
          Length = 649

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 202 LDLSCEISLLKSECHRVKMQRAGLQNELFFAFSVSSLDTEKGPKRCTDHNCEPYKRLFKA 261
           L +  + +LL +E H + MQ        F A S  +  +E+G K+  + N   +++  KA
Sbjct: 570 LKIGPKANLLNNEAHAITMQVTKSTQNSFRAESSQTCHSEQGDKKMEEKNSGNFQK--KA 627

Query: 262 KNLIER 267
            N++++
Sbjct: 628 ANMLQQ 633


>gi|14591904 RecQ protein-like [Homo sapiens]
          Length = 649

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 202 LDLSCEISLLKSECHRVKMQRAGLQNELFFAFSVSSLDTEKGPKRCTDHNCEPYKRLFKA 261
           L +  + +LL +E H + MQ        F A S  +  +E+G K+  + N   +++  KA
Sbjct: 570 LKIGPKANLLNNEAHAITMQVTKSTQNSFRAESSQTCHSEQGDKKMEEKNSGNFQK--KA 627

Query: 262 KNLIER 267
            N++++
Sbjct: 628 ANMLQQ 633


>gi|46411159 TEA domain family member 4 isoform 3 [Homo sapiens]
          Length = 305

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 9/80 (11%)

Query: 125 VFQNFEESMSGIYTCFLEYKPTVEEIVKRLQLKYAIYAYREPHYYYQFTARYHAAP-CNS 183
           V   +E   + I TC  +     +++V++++ +YA   Y   HY Y    R H +P C  
Sbjct: 187 VSSQYESPENMIITCSTKVCSFGKQVVEKVETEYA--RYENGHYSY----RIHRSPLCE- 239

Query: 184 IYNISFEKKLLQILSKLLLD 203
            Y I+F  KL  +  K +++
Sbjct: 240 -YMINFIHKLKHLPEKYMMN 258


>gi|46411156 TEA domain family member 4 isoform 2 [Homo sapiens]
          Length = 391

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 9/80 (11%)

Query: 125 VFQNFEESMSGIYTCFLEYKPTVEEIVKRLQLKYAIYAYREPHYYYQFTARYHAAP-CNS 183
           V   +E   + I TC  +     +++V++++ +YA   Y   HY Y    R H +P C  
Sbjct: 273 VSSQYESPENMIITCSTKVCSFGKQVVEKVETEYA--RYENGHYSY----RIHRSPLCE- 325

Query: 184 IYNISFEKKLLQILSKLLLD 203
            Y I+F  KL  +  K +++
Sbjct: 326 -YMINFIHKLKHLPEKYMMN 344


>gi|46411152 TEA domain family member 4 isoform 1 [Homo sapiens]
          Length = 434

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 9/80 (11%)

Query: 125 VFQNFEESMSGIYTCFLEYKPTVEEIVKRLQLKYAIYAYREPHYYYQFTARYHAAP-CNS 183
           V   +E   + I TC  +     +++V++++ +YA   Y   HY Y    R H +P C  
Sbjct: 316 VSSQYESPENMIITCSTKVCSFGKQVVEKVETEYA--RYENGHYSY----RIHRSPLCE- 368

Query: 184 IYNISFEKKLLQILSKLLLD 203
            Y I+F  KL  +  K +++
Sbjct: 369 -YMINFIHKLKHLPEKYMMN 387


>gi|75709184 contactin 3 [Homo sapiens]
          Length = 1028

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 98  PSFQWYGPKGKVVSENRTAQITSTGSLVFQNFEESMSGIYTCFLEYK 144
           PS++W      +V E RT      G+L   N   + SG++ C  E K
Sbjct: 347 PSYRWLKNGAALVLEERTQ--IENGALTISNLSVTDSGMFQCIAENK 391


>gi|221316650 ephrin receptor EphA1 [Homo sapiens]
          Length = 976

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 6/39 (15%)

Query: 301 CFPGYGMNVQQHPKCPECCVICSPGSYN-PRDGIHCLQC 338
           C PGY     +     E CV C  GSY    D  HCL C
Sbjct: 264 CEPGY-----EEGGSGEACVACPSGSYRMDMDTPHCLTC 297


>gi|153791330 leucine rich repeat neuronal 1 [Homo sapiens]
          Length = 716

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 9/111 (8%)

Query: 32  ISAFLVRVPSSVGHLVRLPRAFRLTKDSVKIVGSTSFPVKAYVMLHQKSPHVLCVTQQLR 91
           +S F    P   GH V+       ++  + ++   SFP +  V +         V    R
Sbjct: 395 LSMFCAMPPEYKGHQVKEVLIQDSSEQCLPMISHDSFPNRLNVDIGTT------VFLDCR 448

Query: 92  NAELIDPSFQWYGPKGKVVSENRTA---QITSTGSLVFQNFEESMSGIYTC 139
                +P   W  P G  ++    +   +++S G+L   N +   SG YTC
Sbjct: 449 AMAEPEPEIYWVTPIGNKITVETLSDKYKLSSEGTLEISNIQIEDSGRYTC 499


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.137    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,164,792
Number of Sequences: 37866
Number of extensions: 564593
Number of successful extensions: 1978
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1954
Number of HSP's gapped (non-prelim): 40
length of query: 350
length of database: 18,247,518
effective HSP length: 103
effective length of query: 247
effective length of database: 14,347,320
effective search space: 3543788040
effective search space used: 3543788040
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.