Guide to the Human Genome
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Name: ZPBP Sequence: fasta or formatted (351aa) NCBI GI: 229577313
Description:

zona pellucida binding protein isoform 1

Referenced in:

Ovary, Uterus and Placenta
Testes and Sperm

Other entries for this name:
alt prot [350aa] zona pellucida binding protein isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         22           2
 C cysteine            4.3         15           2
 D aspartate           1.7          6           1
 E glutamate           5.7         20           2
 F phenylalanine       5.1         18           2
 G glycine             5.1         18           1
 H histidine           2.6          9           1
 I isoleucine          5.4         19           1
 K lysine              6.0         21           2
 L leucine            10.5         37           3
 M methionine          1.7          6           1
 N asparagine          3.7         13           1
 P proline             5.1         18           1
 Q glutamine           5.4         19           2
 R arginine            7.1         25           3
 S serine              8.0         28           2
 T threonine           4.0         14           1
 V valine              6.6         23           2
 W tryptophan          0.6          2           1
 Y tyrosine            5.1         18           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zona pellucida binding protein isoform 1 
ZPBP                  0.991   zona pellucida binding protein isoform 2 
ZPBP2                 0.263   zona pellucida binding protein 2 isoform 2 
ZPBP2                 0.251   zona pellucida binding protein 2 isoform 1 
MXRA5                 0.017   adlican 
AMIGO1                0.012   AMIGO protein 
CNTN2                 0.012   contactin 2 precursor 
LRRN1                 0.010   leucine rich repeat neuronal 1 
DCC                   0.010   deleted in colorectal carcinoma 
SDK1                  0.010   sidekick 1 
CNTN1                 0.010   contactin 1 isoform 1 precursor 
CNTN1                 0.010   contactin 1 isoform 2 precursor 
ZNF532                0.010   zinc finger protein 532 
UTP20                 0.009   down-regulated in metastasis 
LOC653877             0.009   PREDICTED: similar to Temporarily Assigned Gene name...
CR1L                  0.007   complement component (3b/4b) receptor 1-like 
LOC100292877          0.007   PREDICTED: hypothetical protein 
LOC100291270          0.007   PREDICTED: hypothetical protein XP_002346869 
LOC100287955          0.007   PREDICTED: hypothetical protein XP_002342711 
NRXN1                 0.007   neurexin 1 isoform beta precursor 
NRXN1                 0.007   neurexin 1 isoform alpha1 precursor 
IGSF10                0.007   immunoglobulin superfamily, member 10 
RECQL                 0.006   RecQ protein-like 
RECQL                 0.006   RecQ protein-like 
CNTN6                 0.006   contactin 6 
LRRC4                 0.006   leucine rich repeat containing 4 
TEAD4                 0.006   TEA domain family member 4 isoform 3 
TEAD4                 0.006   TEA domain family member 4 isoform 2 
TEAD4                 0.006   TEA domain family member 4 isoform 1 
EPHA1                 0.004   ephrin receptor EphA1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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