Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: TEAD4 Sequence: fasta or formatted (305aa) NCBI GI: 46411159
Description:

TEA domain family member 4 isoform 3

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [434aa] TEA domain family member 4 isoform 1
alt prot [391aa] TEA domain family member 4 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         24           2
 C cysteine            1.3          4           1
 D aspartate           3.3         10           1
 E glutamate           6.9         21           1
 F phenylalanine       5.6         17           2
 G glycine             5.9         18           2
 H histidine           3.6         11           2
 I isoleucine          4.6         14           2
 K lysine              4.9         15           2
 L leucine             6.9         21           2
 M methionine          2.6          8           2
 N asparagine          3.3         10           1
 P proline             7.9         24           2
 Q glutamine           5.6         17           3
 R arginine            3.3         10           1
 S serine             10.5         32           2
 T threonine           3.9         12           1
 V valine              5.9         18           2
 W tryptophan          1.3          4           1
 Y tyrosine            4.9         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TEA domain family member 4 isoform 3 
TEAD4                 1.000   TEA domain family member 4 isoform 1 
TEAD4                 0.902   TEA domain family member 4 isoform 2 
TEAD1                 0.717   TEA domain family member 1 
TEAD3                 0.647   TEA domain family member 3 
TEAD2                 0.560   TEA domain family member 2 
FOXL2                 0.025   forkhead box L2 
MLLT4                 0.022   myeloid/lymphoid or mixed-lineage leukemia (trithora...
LOC100291996          0.022   PREDICTED: hypothetical protein XP_002345433 
LOC100289507          0.022   PREDICTED: hypothetical protein 
LOC100289507          0.022   PREDICTED: hypothetical protein XP_002344219 
KHSRP                 0.020   KH-type splicing regulatory protein 
PCLO                  0.020   piccolo isoform 2 
PCLO                  0.020   piccolo isoform 1 
C17orf96              0.020   hypothetical protein LOC100170841 
DMWD                  0.020   dystrophia myotonica-containing WD repeat motif prot...
CPSF6                 0.018   cleavage and polyadenylation specific factor 6, 68 ...
ATN1                  0.018   atrophin-1 
ATN1                  0.018   atrophin-1 
DIAPH1                0.017   diaphanous 1 isoform 2 
DIAPH1                0.017   diaphanous 1 isoform 1 
CIC                   0.017   capicua homolog 
MYCN                  0.017   v-myc myelocytomatosis viral related oncogene, neuro...
KDM6B                 0.015   lysine (K)-specific demethylase 6B 
INPP5E                0.015   inositol polyphosphate-5-phosphatase E 
MLL2                  0.015   myeloid/lymphoid or mixed-lineage leukemia 2 
TAOK2                 0.015   TAO kinase 2 isoform 1 
COL17A1               0.015   alpha 1 type XVII collagen 
GRINA                 0.015   glutamate receptor, ionotropic, N-methyl D-aspartate...
GRINA                 0.015   glutamate receptor, ionotropic, N-methyl D-aspartate...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press