Guide to the Human Genome
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Name: ZPBP Sequence: fasta or formatted (350aa) NCBI GI: 229577315
Description:

zona pellucida binding protein isoform 2

Referenced in:

Ovary, Uterus and Placenta
Testes and Sperm

Other entries for this name:
alt prot [351aa] zona pellucida binding protein isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         22           2
 C cysteine            4.3         15           2
 D aspartate           1.7          6           1
 E glutamate           5.7         20           2
 F phenylalanine       5.1         18           2
 G glycine             5.1         18           1
 H histidine           2.6          9           1
 I isoleucine          5.4         19           1
 K lysine              6.0         21           2
 L leucine            10.6         37           3
 M methionine          1.7          6           1
 N asparagine          3.7         13           1
 P proline             5.1         18           1
 Q glutamine           5.4         19           2
 R arginine            7.1         25           3
 S serine              8.0         28           2
 T threonine           4.0         14           1
 V valine              6.3         22           2
 W tryptophan          0.6          2           1
 Y tyrosine            5.1         18           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zona pellucida binding protein isoform 2 
ZPBP                  0.993   zona pellucida binding protein isoform 1 
ZPBP2                 0.266   zona pellucida binding protein 2 isoform 2 
ZPBP2                 0.256   zona pellucida binding protein 2 isoform 1 
MXRA5                 0.012   adlican 
ZNF532                0.010   zinc finger protein 532 
AMIGO1                0.010   AMIGO protein 
DCC                   0.009   deleted in colorectal carcinoma 
UTP20                 0.009   down-regulated in metastasis 
LOC653877             0.009   PREDICTED: similar to Temporarily Assigned Gene name...
LRFN3                 0.007   leucine rich repeat and fibronectin type III domain ...
CNTN1                 0.007   contactin 1 isoform 1 precursor 
CNTN1                 0.007   contactin 1 isoform 2 precursor 
CR1L                  0.007   complement component (3b/4b) receptor 1-like 
LOC100292877          0.007   PREDICTED: hypothetical protein 
LOC100291270          0.007   PREDICTED: hypothetical protein XP_002346869 
LOC100287955          0.007   PREDICTED: hypothetical protein XP_002342711 
ITIH3                 0.007   inter-alpha (globulin) inhibitor H3 preproprotein [...
CNTN2                 0.007   contactin 2 precursor 
NRCAM                 0.007   neuronal cell adhesion molecule isoform A precursor ...
NRCAM                 0.007   neuronal cell adhesion molecule isoform B precursor ...
OBSCN                 0.006   obscurin, cytoskeletal calmodulin and titin-interac...
RECQL                 0.006   RecQ protein-like 
RECQL                 0.006   RecQ protein-like 
TEAD4                 0.006   TEA domain family member 4 isoform 3 
TEAD4                 0.006   TEA domain family member 4 isoform 2 
TEAD4                 0.006   TEA domain family member 4 isoform 1 
CNTN3                 0.006   contactin 3 
EPHA1                 0.004   ephrin receptor EphA1 
LRRN1                 0.004   leucine rich repeat neuronal 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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