Guide to the Human Genome
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Name: CR1L Sequence: fasta or formatted (569aa) NCBI GI: 148922949
Description:

complement component (3b/4b) receptor 1-like

Referenced in:

Complement

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         23           2
 C cysteine            5.6         32           1
 D aspartate           4.6         26           2
 E glutamate           4.9         28           2
 F phenylalanine       4.4         25           1
 G glycine             8.1         46           1
 H histidine           3.0         17           1
 I isoleucine          5.4         31           2
 K lysine              4.2         24           2
 L leucine             7.2         41           3
 M methionine          1.2          7           1
 N asparagine          4.7         27           1
 P proline             9.7         55           3
 Q glutamine           2.8         16           2
 R arginine            5.1         29           2
 S serine              9.1         52           3
 T threonine           4.6         26           2
 V valine              6.7         38           2
 W tryptophan          1.6          9           1
 Y tyrosine            3.0         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   complement component (3b/4b) receptor 1-like 
CR1                   0.629   complement receptor 1 isoform S precursor 
CR1                   0.629   complement receptor 1 isoform F precursor 
CR2                   0.204   complement component (3d/Epstein Barr virus) recepto...
CR2                   0.186   complement component (3d/Epstein Barr virus) recepto...
C4BPA                 0.150   complement component 4 binding protein, alpha chain p...
CSMD3                 0.148   CUB and Sushi multiple domains 3 isoform 2 
CSMD3                 0.148   CUB and Sushi multiple domains 3 isoform 1 
CSMD3                 0.144   CUB and Sushi multiple domains 3 isoform 3 
SVEP1                 0.144   polydom 
CD46                  0.142   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.142   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.142   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.142   CD46 antigen, complement regulatory protein isoform ...
CSMD1                 0.140   CUB and Sushi multiple domains 1 
CD46                  0.139   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.139   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.139   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.139   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.139   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.138   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.138   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.138   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.137   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.137   CD46 antigen, complement regulatory protein isoform ...
CSMD2                 0.131   CUB and Sushi multiple domains 2 
SELP                  0.114   selectin P precursor 
CD55                  0.109   decay accelerating factor for complement isoform 2 ...
CD55                  0.109   decay accelerating factor for complement isoform 1 p...
SELE                  0.100   selectin E precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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