Guide to the Human Genome
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Name: RECQL Sequence: fasta or formatted (649aa) NCBI GI: 14591902
Description:

RecQ protein-like

Referenced in:

Replication Proteins

Other entries for this name:
alt mRNA [649aa] RecQ protein-like
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         49           2
 C cysteine            2.8         18           2
 D aspartate           4.9         32           2
 E glutamate           7.4         48           2
 F phenylalanine       3.7         24           1
 G glycine             4.8         31           3
 H histidine           2.3         15           2
 I isoleucine          6.3         41           2
 K lysine              9.2         60           3
 L leucine             8.3         54           2
 M methionine          3.4         22           1
 N asparagine          4.9         32           2
 P proline             2.6         17           1
 Q glutamine           5.4         35           2
 R arginine            3.7         24           2
 S serine              7.6         49           3
 T threonine           4.9         32           2
 V valine              5.9         38           3
 W tryptophan          1.1          7           1
 Y tyrosine            3.2         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RecQ protein-like 
RECQL                 1.000   RecQ protein-like 
BLM                   0.270   Bloom syndrome protein 
RECQL5                0.197   RecQ protein-like 5 isoform 1 
RECQL5                0.185   RecQ protein-like 5 isoform 3 
RECQL5                0.185   RecQ protein-like 5 isoform 2 
WRN                   0.175   Werner syndrome protein 
LOC652522             0.175   PREDICTED: similar to Werner syndrome ATP-dependent...
RECQL4                0.114   RecQ protein-like 4 
DDX42                 0.031   DEAD box polypeptide 42 protein 
DDX42                 0.031   DEAD box polypeptide 42 protein 
DDX17                 0.025   DEAD box polypeptide 17 isoform 3 
DDX17                 0.025   DEAD box polypeptide 17 isoform 1 
DDX21                 0.024   DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 
DDX10                 0.023   DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 
DDX53                 0.022   DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 
DDX49                 0.022   DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 
DDX46                 0.021   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
DDX43                 0.021   DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 
DDX50                 0.021   nucleolar protein GU2 
DDX23                 0.021   DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 
DDX6                  0.020   DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 
HELQ                  0.020   DNA helicase HEL308 
DDX41                 0.019   DEAD-box protein abstrakt 
DDX27                 0.019   DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 
EIF4A3                0.019   eukaryotic translation initiation factor 4A, isoform ...
DDX47                 0.019   DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ...
DDX5                  0.017   DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 
EIF4A1                0.016   eukaryotic translation initiation factor 4A isoform 1...
EIF4A2                0.016   eukaryotic translation initiation factor 4A2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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