Guide to the Human Genome
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Name: ZPBP2 Sequence: fasta or formatted (316aa) NCBI GI: 84875535
Description:

zona pellucida binding protein 2 isoform 1

Referenced in:

Ovary, Uterus and Placenta
Testes and Sperm

Other entries for this name:
alt prot [338aa] zona pellucida binding protein 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         13           1
 C cysteine            5.4         17           2
 D aspartate           5.4         17           1
 E glutamate           5.4         17           2
 F phenylalanine       5.4         17           2
 G glycine             4.1         13           1
 H histidine           3.2         10           1
 I isoleucine          5.1         16           1
 K lysine              6.0         19           2
 L leucine             8.2         26           2
 M methionine          2.2          7           2
 N asparagine          5.4         17           2
 P proline             4.4         14           1
 Q glutamine           3.8         12           2
 R arginine            4.4         14           1
 S serine              7.3         23           1
 T threonine           7.0         22           2
 V valine              7.9         25           2
 W tryptophan          0.9          3           1
 Y tyrosine            4.4         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zona pellucida binding protein 2 isoform 1 
ZPBP2                 0.980   zona pellucida binding protein 2 isoform 2 
ZPBP                  0.277   zona pellucida binding protein isoform 2 
ZPBP                  0.272   zona pellucida binding protein isoform 1 
DCC                   0.017   deleted in colorectal carcinoma 
PXDN                  0.016   peroxidasin 
PXDNL                 0.013   peroxidasin homolog-like 
LINGO3                0.011   leucine rich repeat and Ig domain containing 3 [Hom...
NOL9                  0.011   nucleolar protein 9 
GPAM                  0.009   mitochondrial glycerol 3-phosphate acyltransferase ...
DSCAM                 0.009   Down syndrome cell adhesion molecule isoform CHD2-42...
NFASC                 0.009   neurofascin isoform 3 precursor 
NFASC                 0.009   neurofascin isoform 2 precursor 
NFASC                 0.009   neurofascin isoform 4 precursor 
NFASC                 0.009   neurofascin isoform 6 precursor 
NFASC                 0.009   neurofascin isoform 5 precursor 
NFASC                 0.009   neurofascin isoform 1 precursor 
COL11A2               0.009   collagen, type XI, alpha 2 isoform 2 preproprotein ...
COL11A2               0.009   collagen, type XI, alpha 2 isoform 3 preproprotein ...
COL11A2               0.009   collagen, type XI, alpha 2 isoform 1 preproprotein ...
LINGO2                0.006   leucine rich repeat and Ig domain containing 2 [Homo...
HMCN2                 0.006   PREDICTED: hemicentin 2 
HMCN2                 0.006   PREDICTED: hemicentin 2 
HMCN2                 0.006   PREDICTED: hemicentin 2 
LAMB4                 0.006   laminin, beta 4 
LOC100129630          0.005   PREDICTED: hypothetical protein 
LRFN2                 0.005   leucine rich repeat and fibronectin type III domain ...
CNTN4                 0.005   contactin 4 isoform c precursor 
CNTN4                 0.005   contactin 4 isoform a precursor 
TNFRSF14              0.005   tumor necrosis factor receptor superfamily, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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