Guide to the Human Genome
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Search of human proteins with 22749197

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|22749197 motile sperm domain containing 2 [Homo sapiens]
         (518 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22749197 motile sperm domain containing 2 [Homo sapiens]          1045   0.0  
gi|4759302 VAMP-associated protein B/C [Homo sapiens]                  62   1e-09
gi|94721252 vesicle-associated membrane protein-associated prote...    54   4e-07
gi|94721250 vesicle-associated membrane protein-associated prote...    52   2e-06
gi|169215836 PREDICTED: similar to SEC14p-like protein TAP3 [Hom...    42   0.001
gi|169215635 PREDICTED: similar to SEC14p-like protein TAP3 [Hom...    42   0.001
gi|169216042 PREDICTED: similar to SEC14p-like protein TAP3 [Hom...    42   0.001
gi|9506543 motile sperm domain containing 1 [Homo sapiens]             40   0.004
gi|4506301 protein tyrosine phosphatase, non-receptor type 9 [Ho...    39   0.009
gi|238624167 SEC14p-like protein TAP3 isoform b [Homo sapiens]         38   0.020
gi|28376621 SEC14p-like protein TAP3 isoform a [Homo sapiens]          38   0.020
gi|13122608 motile sperm domain containing 3 isoform a [Homo sap...    38   0.020
gi|93141014 motile sperm domain containing 3 isoform a [Homo sap...    38   0.020
gi|93141012 motile sperm domain containing 3 isoform a [Homo sap...    38   0.020
gi|150010661 SEC14-like 5 [Homo sapiens]                               37   0.033
gi|119395734 breast cancer 2, early onset [Homo sapiens]               37   0.043
gi|27734849 retinaldehyde binding protein 1-like 1 [Homo sapiens]      35   0.17 
gi|93141016 motile sperm domain containing 3 isoform b [Homo sap...    35   0.17 
gi|115583667 sodium channel, voltage-gated, type XI, alpha [Homo...    33   0.82 
gi|41152076 steroid-sensitive protein 1 [Homo sapiens]                 32   1.1  
gi|41152074 steroid-sensitive protein 1 [Homo sapiens]                 32   1.1  
gi|31543535 R3H domain containing 1 [Homo sapiens]                     32   1.8  
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]    31   2.4  
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]    31   2.4  
gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo sap...    31   2.4  
gi|55953110 retinoblastoma protein-binding zinc finger protein i...    31   2.4  
gi|20336260 retinoblastoma protein-binding zinc finger protein i...    31   2.4  
gi|20336258 retinoblastoma protein-binding zinc finger protein i...    31   2.4  
gi|156071450 nardilysin isoform a [Homo sapiens]                       31   3.1  
gi|51317366 myosin XVIIIB [Homo sapiens]                               31   3.1  

>gi|22749197 motile sperm domain containing 2 [Homo sapiens]
          Length = 518

 Score = 1045 bits (2703), Expect = 0.0
 Identities = 518/518 (100%), Positives = 518/518 (100%)

Query: 1   MAENHAQNKAKLISETRRRFEAEYVTDKSDKYDARDVERLQQDDNWVESYLSWRHNIVDE 60
           MAENHAQNKAKLISETRRRFEAEYVTDKSDKYDARDVERLQQDDNWVESYLSWRHNIVDE
Sbjct: 1   MAENHAQNKAKLISETRRRFEAEYVTDKSDKYDARDVERLQQDDNWVESYLSWRHNIVDE 60

Query: 61  TLKMLDESFQWRKEISVNDLNESSIPRWLLEIGVIYLHGYDKEGNKLFWIRVKYHVKDQK 120
           TLKMLDESFQWRKEISVNDLNESSIPRWLLEIGVIYLHGYDKEGNKLFWIRVKYHVKDQK
Sbjct: 61  TLKMLDESFQWRKEISVNDLNESSIPRWLLEIGVIYLHGYDKEGNKLFWIRVKYHVKDQK 120

Query: 121 TILDKKKLIAFWLERYAKRENGKPVTVMFDLSETGINSIDMDFVRFIINCFKVYYPKYLS 180
           TILDKKKLIAFWLERYAKRENGKPVTVMFDLSETGINSIDMDFVRFIINCFKVYYPKYLS
Sbjct: 121 TILDKKKLIAFWLERYAKRENGKPVTVMFDLSETGINSIDMDFVRFIINCFKVYYPKYLS 180

Query: 181 KIVIFDMPWLMNAAFKIVKTWLGPEAVSLLKFTSKNEVQDYVSVEYLPPHMGGTDPFKYS 240
           KIVIFDMPWLMNAAFKIVKTWLGPEAVSLLKFTSKNEVQDYVSVEYLPPHMGGTDPFKYS
Sbjct: 181 KIVIFDMPWLMNAAFKIVKTWLGPEAVSLLKFTSKNEVQDYVSVEYLPPHMGGTDPFKYS 240

Query: 241 YPPLVDDDFQTPLCENGPITSEDETSSKEDIESDGKETLETISNEEQTPLLKKINPTEST 300
           YPPLVDDDFQTPLCENGPITSEDETSSKEDIESDGKETLETISNEEQTPLLKKINPTEST
Sbjct: 241 YPPLVDDDFQTPLCENGPITSEDETSSKEDIESDGKETLETISNEEQTPLLKKINPTEST 300

Query: 301 SKAEENEKVDSKVKAFKKPLSVFKGPLLHISPAEELYFGSTESGEKKTLIVLTNVTKNIV 360
           SKAEENEKVDSKVKAFKKPLSVFKGPLLHISPAEELYFGSTESGEKKTLIVLTNVTKNIV
Sbjct: 301 SKAEENEKVDSKVKAFKKPLSVFKGPLLHISPAEELYFGSTESGEKKTLIVLTNVTKNIV 360

Query: 361 AFKVRTTAPEKYRVKPSNSSCDPGASVDIVVSPHGGLTVSAQDRFLIMAAEMEQSSGTGP 420
           AFKVRTTAPEKYRVKPSNSSCDPGASVDIVVSPHGGLTVSAQDRFLIMAAEMEQSSGTGP
Sbjct: 361 AFKVRTTAPEKYRVKPSNSSCDPGASVDIVVSPHGGLTVSAQDRFLIMAAEMEQSSGTGP 420

Query: 421 AELTQFWKEVPRNKVMEHRLRCHTVESSKPNTLTLKDNAFNMSDKTSEDICLQLSRLLES 480
           AELTQFWKEVPRNKVMEHRLRCHTVESSKPNTLTLKDNAFNMSDKTSEDICLQLSRLLES
Sbjct: 421 AELTQFWKEVPRNKVMEHRLRCHTVESSKPNTLTLKDNAFNMSDKTSEDICLQLSRLLES 480

Query: 481 NRKLEDQVQRCIWFQQLLLSLTMLLLAFVTSFFYLLYS 518
           NRKLEDQVQRCIWFQQLLLSLTMLLLAFVTSFFYLLYS
Sbjct: 481 NRKLEDQVQRCIWFQQLLLSLTMLLLAFVTSFFYLLYS 518


>gi|4759302 VAMP-associated protein B/C [Homo sapiens]
          Length = 243

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 20/180 (11%)

Query: 327 LLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGAS 386
           +L + P  EL F    +    T + L N T   V FKV+TTAP +Y V+P++   D GAS
Sbjct: 7   VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGAS 66

Query: 387 VDIVVSPHG---GLTVSAQDRFLIMAAEMEQSSGTGPAELTQFWKEVPRNKVMEHRLRC- 442
           +++ V            ++ +F++ +      + T  +++   WKE     +M+ +LRC 
Sbjct: 67  INVSVMLQPFDYDPNEKSKHKFMVQS----MFAPTDTSDMEAVWKEAKPEDLMDSKLRCV 122

Query: 443 --HTVESSKPNTLTLKDNAFNMSDKTSEDIC----------LQLSRLLESNRKLEDQVQR 490
                E+ KP+ + +       + KT   I            ++ +++E  ++L+ +VQR
Sbjct: 123 FELPAENDKPHDVEINKIISTTASKTETPIVSKSLSSSLDDTEVKKVMEECKRLQGEVQR 182


>gi|94721252 vesicle-associated membrane protein-associated protein
           A isoform 2 [Homo sapiens]
          Length = 249

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 33/190 (17%)

Query: 327 LLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGA- 385
           +L + P  +L F    +    T + L N +   V FKV+TTAP +Y V+P++   DPG+ 
Sbjct: 14  ILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGST 73

Query: 386 -SVDIVVSPHG-GLTVSAQDRFLIMAAEMEQSSGTGPAELTQFWKEVPRNKVMEHRLRC- 442
            +V +++ P        ++ +F++       ++    +++   WKE   +++M+ +LRC 
Sbjct: 74  VTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNT----SDMEAVWKEAKPDELMDSKLRCV 129

Query: 443 ----------HTVESS---------------KPNTLTLKDNAFNMSDKTSEDICLQLSRL 477
                     + +E S               KP++++L D       +  + +  ++ +L
Sbjct: 130 FEMPNENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKL 189

Query: 478 LESNRKLEDQ 487
            E NR L D+
Sbjct: 190 SEENRHLRDE 199


>gi|94721250 vesicle-associated membrane protein-associated protein
           A isoform 1 [Homo sapiens]
          Length = 294

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 7/119 (5%)

Query: 327 LLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGA- 385
           +L + P  +L F    +    T + L N +   V FKV+TTAP +Y V+P++   DPG+ 
Sbjct: 14  ILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGST 73

Query: 386 -SVDIVVSPHG-GLTVSAQDRFLIMAAEMEQSSGTGPAELTQFWKEVPRNKVMEHRLRC 442
            +V +++ P        ++ +F++       ++    +++   WKE   +++M+ +LRC
Sbjct: 74  VTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNT----SDMEAVWKEAKPDELMDSKLRC 128


>gi|169215836 PREDICTED: similar to SEC14p-like protein TAP3 [Homo
           sapiens]
          Length = 397

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 46/216 (21%), Positives = 96/216 (44%), Gaps = 29/216 (13%)

Query: 43  DDNWVESYLSWRHNIVDETLKMLDESFQWRKEISVNDLNESSIPRWLLEIGVIYLHGYDK 102
           DD ++  +L  R   + ++  ML +  ++RK+  + ++     P  +       + G+D 
Sbjct: 34  DDYFLLRWLQARSFDLQKSEDMLRKHMEFRKQQDLANILAWQPPEVVRLYNANGICGHDG 93

Query: 103 EGNKLFWIRVKYHVK---DQKTIL---DKKKLI------AFWLERYAKRENGK------P 144
           EG+ ++     YH+    D K +L    K++L+         L R  + ++ K       
Sbjct: 94  EGSPVW-----YHIVGSLDPKGLLLSASKQELLRDSFRSCELLLRECELQSQKLGKRVEK 148

Query: 145 VTVMFDLSETGINSI---DMDFVRFIINCFKVYYPKYLSKIVIFDMPWLMNAAFKIVKTW 201
           +  +F L   G+  +    ++ ++   +  +  YP+ L  +++   P L   AF +VK++
Sbjct: 149 IIAIFGLEGLGLRDLWKPGIELLQEFFSALEANYPEILKSLIVVRAPKLFAVAFNLVKSY 208

Query: 202 LGPEA---VSLLKFTSKNEVQDYVSVEYLPPHMGGT 234
           +  E    V +L    K E+  ++S + LP   GGT
Sbjct: 209 MSEETRRKVVILGDNWKQELTKFISPDQLPVEFGGT 244


>gi|169215635 PREDICTED: similar to SEC14p-like protein TAP3 [Homo
           sapiens]
          Length = 397

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 46/216 (21%), Positives = 96/216 (44%), Gaps = 29/216 (13%)

Query: 43  DDNWVESYLSWRHNIVDETLKMLDESFQWRKEISVNDLNESSIPRWLLEIGVIYLHGYDK 102
           DD ++  +L  R   + ++  ML +  ++RK+  + ++     P  +       + G+D 
Sbjct: 34  DDYFLLRWLQARSFDLQKSEDMLRKHMEFRKQQDLANILAWQPPEVVRLYNANGICGHDG 93

Query: 103 EGNKLFWIRVKYHVK---DQKTIL---DKKKLI------AFWLERYAKRENGK------P 144
           EG+ ++     YH+    D K +L    K++L+         L R  + ++ K       
Sbjct: 94  EGSPVW-----YHIVGSLDPKGLLLSASKQELLRDSFRSCELLLRECELQSQKLGKRVEK 148

Query: 145 VTVMFDLSETGINSI---DMDFVRFIINCFKVYYPKYLSKIVIFDMPWLMNAAFKIVKTW 201
           +  +F L   G+  +    ++ ++   +  +  YP+ L  +++   P L   AF +VK++
Sbjct: 149 IIAIFGLEGLGLRDLWKPGIELLQEFFSALEANYPEILKSLIVVRAPKLFAVAFNLVKSY 208

Query: 202 LGPEA---VSLLKFTSKNEVQDYVSVEYLPPHMGGT 234
           +  E    V +L    K E+  ++S + LP   GGT
Sbjct: 209 MSEETRRKVVILGDNWKQELTKFISPDQLPVEFGGT 244


>gi|169216042 PREDICTED: similar to SEC14p-like protein TAP3 [Homo
           sapiens]
          Length = 397

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 46/219 (21%), Positives = 93/219 (42%), Gaps = 35/219 (15%)

Query: 43  DDNWVESYLSWRHNIVDETLKMLDESFQWRKEISVNDLNESSIPRWLLEIGVIYLHGYDK 102
           DD ++  +L  R   + ++  ML +  ++RK+  + ++     P  +       + G+D 
Sbjct: 34  DDYFLLRWLRARSFDLQKSEDMLRKHMEFRKQQDLANILAWQPPEVVRLYNANGICGHDG 93

Query: 103 EGNKLFWIRVKYHVKDQKTILDKKKLIAFWLERYAKREN------------------GKP 144
           EG+ ++     YH+      LD K L+    ++   R++                  GK 
Sbjct: 94  EGSPVW-----YHIVGS---LDPKGLLLSASKQELLRDSFRSCELLLRECELQSQKLGKK 145

Query: 145 VT---VMFDLSETGINSI---DMDFVRFIINCFKVYYPKYLSKIVIFDMPWLMNAAFKIV 198
           V     +F L   G+  +    ++ ++   +  +  YP+ L  +++   P L   AF +V
Sbjct: 146 VEKIIAIFGLEGLGLRDLWKPGIELLQEFFSALEANYPEILKSLIVVRAPKLFAVAFNLV 205

Query: 199 KTWLGPEA---VSLLKFTSKNEVQDYVSVEYLPPHMGGT 234
           K+++  E    V +L    K E+  ++S + LP   GGT
Sbjct: 206 KSYMSEETRRKVVILGDNWKQELTKFISPDQLPVEFGGT 244


>gi|9506543 motile sperm domain containing 1 [Homo sapiens]
          Length = 213

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 16/128 (12%)

Query: 330 ISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGASVDI 389
           + P E +++   +S  K+ L  L N  +  + FKV  T P KY V  +  +  P   VDI
Sbjct: 19  VFPTELIFYADDQSTHKQVL-TLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKPQCCVDI 77

Query: 390 VV------SPHGGLTVSAQDRFLIMAAEMEQSSGTGPAE----LTQFWKEVPRNKVMEHR 439
           V+      S H G+     D+F +  +E  Q    G  E    L    KE  + +  E R
Sbjct: 78  VIRHRDVRSCHYGVI----DKFRLQVSEQSQRKALGRKEVVATLLPSAKEQQKEE-EEKR 132

Query: 440 LRCHTVES 447
           L+ H  ES
Sbjct: 133 LKEHLTES 140


>gi|4506301 protein tyrosine phosphatase, non-receptor type 9 [Homo
           sapiens]
          Length = 593

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 20/101 (19%), Positives = 48/101 (47%), Gaps = 2/101 (1%)

Query: 133 LERYAKRENGKPVTVMFDLSETGINSIDMDFVRFIINCFKVYYPKYLSKIVIFDMPWLMN 192
           ++ +  + NG  +  ++D+  +   + ++D  + ++N  K  +P  L K++I   P    
Sbjct: 139 VDSFETQRNG--LVFIYDMCGSNYANFELDLGKKVLNLLKGAFPARLKKVLIVGAPIWFR 196

Query: 193 AAFKIVKTWLGPEAVSLLKFTSKNEVQDYVSVEYLPPHMGG 233
             + I+   L  +    ++    +EV  ++  E LP ++GG
Sbjct: 197 VPYSIISLLLKDKVRERIQILKTSEVTQHLPRECLPENLGG 237


>gi|238624167 SEC14p-like protein TAP3 isoform b [Homo sapiens]
          Length = 360

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 43/211 (20%), Positives = 88/211 (41%), Gaps = 19/211 (9%)

Query: 43  DDNWVESYLSWRHNIVDETLKMLDESFQWRKEISVNDLNESSIPRWLLEIGVIYLHGYDK 102
           DD ++  +L  R+  + ++  ML    ++RK+  ++++     P  +       L GYD 
Sbjct: 34  DDYFLLRWLRARNFDLQKSEDMLRRHMEFRKQQDLDNIVTWQPPEVIQLYDSGGLCGYDY 93

Query: 103 EGNKLFWIRVK--------YHVKDQKTILDKKKLIAFWLER--YAKRENGKPVTV---MF 149
           EG  +++  +              Q  I  + K+    L       ++ G+ + +   +F
Sbjct: 94  EGCPVYFNIIGSLDPKGLLLSASKQDMIRKRIKVCELLLHECELQTQKLGRKIEMALMVF 153

Query: 150 DLSETGINSIDMDFVRFIINCFKVY---YPKYLSKIVIFDMPWLMNAAFKIVKTWLGPEA 206
           D+    +  +    V      F +    YP+ L  +++   P L   AF +VK+++  E 
Sbjct: 154 DMEGLSLKHLWKPAVEVYQQFFSILEANYPETLKNLIVIRAPKLFPVAFNLVKSFMSEET 213

Query: 207 ---VSLLKFTSKNEVQDYVSVEYLPPHMGGT 234
              + +L    K E+  ++S + LP   GGT
Sbjct: 214 RRKIVILGDNWKQELTKFISPDQLPVEFGGT 244


>gi|28376621 SEC14p-like protein TAP3 isoform a [Homo sapiens]
          Length = 406

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 43/211 (20%), Positives = 88/211 (41%), Gaps = 19/211 (9%)

Query: 43  DDNWVESYLSWRHNIVDETLKMLDESFQWRKEISVNDLNESSIPRWLLEIGVIYLHGYDK 102
           DD ++  +L  R+  + ++  ML    ++RK+  ++++     P  +       L GYD 
Sbjct: 34  DDYFLLRWLRARNFDLQKSEDMLRRHMEFRKQQDLDNIVTWQPPEVIQLYDSGGLCGYDY 93

Query: 103 EGNKLFWIRVK--------YHVKDQKTILDKKKLIAFWLER--YAKRENGKPVTV---MF 149
           EG  +++  +              Q  I  + K+    L       ++ G+ + +   +F
Sbjct: 94  EGCPVYFNIIGSLDPKGLLLSASKQDMIRKRIKVCELLLHECELQTQKLGRKIEMALMVF 153

Query: 150 DLSETGINSIDMDFVRFIINCFKVY---YPKYLSKIVIFDMPWLMNAAFKIVKTWLGPEA 206
           D+    +  +    V      F +    YP+ L  +++   P L   AF +VK+++  E 
Sbjct: 154 DMEGLSLKHLWKPAVEVYQQFFSILEANYPETLKNLIVIRAPKLFPVAFNLVKSFMSEET 213

Query: 207 ---VSLLKFTSKNEVQDYVSVEYLPPHMGGT 234
              + +L    K E+  ++S + LP   GGT
Sbjct: 214 RRKIVILGDNWKQELTKFISPDQLPVEFGGT 244


>gi|13122608 motile sperm domain containing 3 isoform a [Homo
           sapiens]
          Length = 235

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 326 PLLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGA 385
           P+L   P  +L F + +    + L+ L N T   + F+V  TAP KY V  +     P +
Sbjct: 33  PVLVFPP--DLVFRADQRSGPRQLLTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQS 90

Query: 386 SVDIVVSPHGGLT--VSAQDRFLIMAAE 411
            +DIV+     +      QDRF I  +E
Sbjct: 91  CIDIVIRHVAPIPSHYDVQDRFRIELSE 118


>gi|93141014 motile sperm domain containing 3 isoform a [Homo
           sapiens]
          Length = 235

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 326 PLLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGA 385
           P+L   P  +L F + +    + L+ L N T   + F+V  TAP KY V  +     P +
Sbjct: 33  PVLVFPP--DLVFRADQRSGPRQLLTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQS 90

Query: 386 SVDIVVSPHGGLT--VSAQDRFLIMAAE 411
            +DIV+     +      QDRF I  +E
Sbjct: 91  CIDIVIRHVAPIPSHYDVQDRFRIELSE 118


>gi|93141012 motile sperm domain containing 3 isoform a [Homo
           sapiens]
          Length = 235

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 326 PLLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGA 385
           P+L   P  +L F + +    + L+ L N T   + F+V  TAP KY V  +     P +
Sbjct: 33  PVLVFPP--DLVFRADQRSGPRQLLTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQS 90

Query: 386 SVDIVVSPHGGLT--VSAQDRFLIMAAE 411
            +DIV+     +      QDRF I  +E
Sbjct: 91  CIDIVIRHVAPIPSHYDVQDRFRIELSE 118


>gi|150010661 SEC14-like 5 [Homo sapiens]
          Length = 696

 Score = 37.4 bits (85), Expect = 0.033
 Identities = 43/201 (21%), Positives = 86/201 (42%), Gaps = 27/201 (13%)

Query: 58  VDETLKMLDESFQWRKEISVNDLNESSIPRWLLEIGVIYLHGY---DKEGNKLFWIRV-K 113
           +D+  +ML +S  WRK+  V+ L ++  P  LLE    Y  G+   D +G  L+ +R+ +
Sbjct: 278 LDKAREMLRQSLSWRKQHQVDLLLQTWQPPALLE--EFYAGGWHYQDIDGRPLYILRLGQ 335

Query: 114 YHVKDQKTILDKKKLIAFWLE---------RYAKRENGKPV---TVMFDLSETGINSIDM 161
              K     + ++ L+   L            + R+ G+P+   T + DL    +  +  
Sbjct: 336 MDTKGLMKAVGEEALLRHVLSVNEEGQKRCEGSTRQLGRPISSWTCLLDLEGLNMRHLWR 395

Query: 162 DFVRFIINCFKVY---YPKYLSKIVIFDMPWLMNAAFKIVKTWLGPEAVSLLKFTSKNEV 218
             V+ ++   +V    YP+ L +++I   P +    + ++  ++           S +  
Sbjct: 396 PGVKALLRMIEVVEDNYPETLGRLLIVRAPRVFPVLWTLISPFINENTRRKFLIYSGSNY 455

Query: 219 Q------DYVSVEYLPPHMGG 233
           Q      DY+  E +P  +GG
Sbjct: 456 QGPGGLVDYLDREVIPDFLGG 476


>gi|119395734 breast cancer 2, early onset [Homo sapiens]
          Length = 3418

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 12/134 (8%)

Query: 367  TAPEKYRVKPSNSSCDPGASVDIVVSPHGGLTVSAQDRF--LIMAAEMEQSSGTGPAELT 424
            T+ E + +  S+S C         +  H   TVS ++    LI+   +E ++GT   E+T
Sbjct: 1251 TSAEVHPISLSSSKCHDSVVSMFKIENHNDKTVSEKNNKCQLILQNNIEMTTGTFVEEIT 1310

Query: 425  QFWKEVPRNKVME--------HRLRCHTVESSKPNTLTLKDNAFNMSDKTSEDICLQLSR 476
            + +K    N+  +        H L     +SSK +T+ +  +  ++      +ICL+LS 
Sbjct: 1311 ENYKRNTENEDNKYTAASRNSHNLEFDGSDSSKNDTVCIHKDETDLLFTDQHNICLKLSG 1370

Query: 477  --LLESNRKLEDQV 488
              + E N ++++ +
Sbjct: 1371 QFMKEGNTQIKEDL 1384


>gi|27734849 retinaldehyde binding protein 1-like 1 [Homo sapiens]
          Length = 354

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 41/212 (19%), Positives = 89/212 (41%), Gaps = 11/212 (5%)

Query: 36  DVERLQQDDNWVESYLSWRHNIVDETLKMLDESFQWRK---EISVN-DLNESSIPRWLLE 91
           D+  L+ DD ++  +L  R     +  ++L + FQ+R+   ++  N   ++  I R L++
Sbjct: 65  DIGFLRTDDAFILRFLRARKFHQADAFRLLAQYFQYRQLNLDMFKNFKADDPGIKRALID 124

Query: 92  IGVIYLHGYDKEGNKLFWIRVKYHVKDQKTILDKKKLIAFWLERYAK----RENGKPVTV 147
                L   D  G K+  +      + + +  D  + I   LE   +    + NG  + +
Sbjct: 125 GFPGVLENRDHYGRKILLLFAANWDQSRNSFTDILRAILLSLEVLIEDPELQINGFILII 184

Query: 148 MF-DLSETGINSIDMDFVRFIINCFKVYYPKYLSKIVIFDMPWLMNAAFKIVKTWLGPEA 206
            + + S    + +    ++  I   +  +P     +   + PW ++A + ++K +L  + 
Sbjct: 185 DWSNFSFKQASKLTPSILKLAIEGLQDSFPARFGGVHFVNQPWYIHALYTLIKPFLKDKT 244

Query: 207 VS--LLKFTSKNEVQDYVSVEYLPPHMGGTDP 236
                L   + N +   +  E+LP   GGT P
Sbjct: 245 RKRIFLHGNNLNSLHQLIHPEFLPSEFGGTLP 276


>gi|93141016 motile sperm domain containing 3 isoform b [Homo
           sapiens]
          Length = 225

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 10/86 (11%)

Query: 326 PLLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGA 385
           P+L   P  +L F + +    + L+ L N T   + F+V  TAP KY V  +     P +
Sbjct: 33  PVLVFPP--DLVFRADQRSGPRQLLTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQS 90

Query: 386 SVDIVVSPHGGLTVSAQDRFLIMAAE 411
            +DI            QDRF I  +E
Sbjct: 91  CIDI--------HYDVQDRFRIELSE 108


>gi|115583667 sodium channel, voltage-gated, type XI, alpha [Homo
            sapiens]
          Length = 1791

 Score = 32.7 bits (73), Expect = 0.82
 Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 30/136 (22%)

Query: 204  PEAVSLLKFTSKNEVQDYVSVEYLPPHMGGTDPFKYSYPPLVDDDFQTPLCENGPITSED 263
            PEA   +K+++ ++  D      LP  +    P KY +           L  + P+ SED
Sbjct: 1635 PEATQFIKYSALSDFADA-----LPEPLRVAKPNKYQF-----------LVMDLPMVSED 1678

Query: 264  ETSSKEDI---------ESDGKETLETISNE---EQTPLLKKINPTESTSKAEENEKVDS 311
                 + +          SDG ++++ +  E   E  PL K   P  +T+K +E E+  +
Sbjct: 1679 RLHCMDILFAFTARVLGGSDGLDSMKAMMEEKFMEANPLKKLYEPIVTTTKRKEEERGAA 1738

Query: 312  KV-KAFKK-PLSVFKG 325
             + KAF+K  + V KG
Sbjct: 1739 IIQKAFRKYMMKVTKG 1754


>gi|41152076 steroid-sensitive protein 1 [Homo sapiens]
          Length = 950

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 18/59 (30%), Positives = 26/59 (44%)

Query: 256 NGPITSEDETSSKEDIESDGKETLETISNEEQTPLLKKINPTESTSKAEENEKVDSKVK 314
           N P+    E+   E +E   KE  + + NE    LLK     + + K  + EK  SK K
Sbjct: 528 NVPLKKAKESKKHEKLEKPEKEKKKKMKNENADKLLKSEKQMKKSEKKSKQEKEKSKKK 586


>gi|41152074 steroid-sensitive protein 1 [Homo sapiens]
          Length = 950

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 18/59 (30%), Positives = 26/59 (44%)

Query: 256 NGPITSEDETSSKEDIESDGKETLETISNEEQTPLLKKINPTESTSKAEENEKVDSKVK 314
           N P+    E+   E +E   KE  + + NE    LLK     + + K  + EK  SK K
Sbjct: 528 NVPLKKAKESKKHEKLEKPEKEKKKKMKNENADKLLKSEKQMKKSEKKSKQEKEKSKKK 586


>gi|31543535 R3H domain containing 1 [Homo sapiens]
          Length = 1099

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 51/248 (20%), Positives = 95/248 (38%), Gaps = 42/248 (16%)

Query: 259 ITSEDETSSKEDIESDGKETLET---ISNEEQTPLLKKIN------------PTESTSKA 303
           +T +DET++ +D+E++ K+T      I +E    +L + N            P +S  + 
Sbjct: 7   VTVKDETATMKDLEAEVKDTTRVENLIKSENYGKILVEKNEHCIENNIDLQRPLQSFGQT 66

Query: 304 EENEKVDSKVKAFKKPLSVFK------GPLLHISPAEELYFGSTESGEKKTLIVLTNVTK 357
            +  K  SK+K  +  L+V +       P +     E++    T+S EK+         K
Sbjct: 67  GKRSKSSSKLKLVRS-LAVCEESPPPPAPEISQENQEKIQIQLTQSFEKEEKPSKDEAEK 125

Query: 358 NIVAFKVRTTAPEKYRVKPSNSSCDPGASVDIVVSPHGGLTVSAQDRFLIMAAEME--QS 415
                K     P K   + S+        +D+       L  + +DR +++  E E    
Sbjct: 126 E----KASDKLPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLLKLEQEILDF 181

Query: 416 SGTGPAELTQFWKEVPRNKVMEHRLRC-----HTVESS-------KPNTLTLKDNAFN-- 461
            G   +   +F      ++++ HR+       H V+ S       K +   + D  FN  
Sbjct: 182 IGNNESPRKKFPPMTSYHRMLLHRVAAYFGLDHNVDQSGKSVIVNKTSNTRIPDQKFNEH 241

Query: 462 MSDKTSED 469
           + D   ED
Sbjct: 242 IKDDKGED 249


>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
          Length = 2454

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 8/117 (6%)

Query: 233  GTDPFKYSYPPLVDDDFQTPLCENGPITSE--DETSSKEDIESDGKETLETISNEEQTPL 290
            G +    S P  VDDD      EN        +E  +    + DG    E    +++T  
Sbjct: 1208 GDEALSKSVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEEGKKRTGK 1267

Query: 291  LKKINPTESTSKAEENEKVDSKVKAFKKPLSVFKGPLLHISPAEELYFGSTESGEKK 347
              + NP +  +K + N + DS  +  KKP   ++  LL      +L     ESGE+K
Sbjct: 1268 QNEENPGDEEAKNQVNSESDSDSEESKKPR--YRHRLLR----HKLTVSDGESGEEK 1318


>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
          Length = 2492

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 8/117 (6%)

Query: 233  GTDPFKYSYPPLVDDDFQTPLCENGPITSE--DETSSKEDIESDGKETLETISNEEQTPL 290
            G +    S P  VDDD      EN        +E  +    + DG    E    +++T  
Sbjct: 1246 GDEALSKSVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEEGKKRTGK 1305

Query: 291  LKKINPTESTSKAEENEKVDSKVKAFKKPLSVFKGPLLHISPAEELYFGSTESGEKK 347
              + NP +  +K + N + DS  +  KKP   ++  LL      +L     ESGE+K
Sbjct: 1306 QNEENPGDEEAKNQVNSESDSDSEESKKPR--YRHRLLR----HKLTVSDGESGEEK 1356


>gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo
           sapiens]
          Length = 528

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 12/101 (11%)

Query: 218 VQDYVSVEYLPPHMGGTDPFKYSYPPLVDDDFQTPLCENGPITSEDETSSKEDIESDGKE 277
           ++D    E LP     TD    S P L +   + P   + P  +E+E   +E+ E + +E
Sbjct: 276 IRDKYRSEALP-----TDLPAPSAPDLTEPKEEQPPVPSSP--TEEEEEEEEEEEEEAEE 328

Query: 278 TLETISNEEQTPLLKKINPTESTSKAEENE--KVDSKVKAF 316
             E   +EE  P    ++P +  S AEE++    D + +AF
Sbjct: 329 EEEEEDSEEAPP---PLSPPQPASPAEEDKMPPYDEQTQAF 366


>gi|55953110 retinoblastoma protein-binding zinc finger protein
           isoform c [Homo sapiens]
          Length = 1481

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 11/105 (10%)

Query: 222 VSVEYLPPHMGGTDPFKYSYPPLVDDDFQTPLCENGPITSEDETSSKEDIESDGKETLET 281
           V+ + +PP +    P  +   P  D+  +   CE   +  E+E   +ED E +  +  + 
Sbjct: 29  VASQEVPPELATPAP-AWEPQPEPDERLEAAACEVNDLGEEEEEEEEEDEEEEEDDDDDE 87

Query: 282 ISNEEQTPLLKKINPTESTSKAEENEKVDSKVKAFKKPLSVFKGP 326
           + +E +          E  S   EN   + +++  +KP  + + P
Sbjct: 88  LEDEGE----------EEASMPNENSVKEPEIRCDEKPEDLLEEP 122


>gi|20336260 retinoblastoma protein-binding zinc finger protein
           isoform b [Homo sapiens]
          Length = 1682

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 11/105 (10%)

Query: 222 VSVEYLPPHMGGTDPFKYSYPPLVDDDFQTPLCENGPITSEDETSSKEDIESDGKETLET 281
           V+ + +PP +    P  +   P  D+  +   CE   +  E+E   +ED E +  +  + 
Sbjct: 230 VASQEVPPELATPAP-AWEPQPEPDERLEAAACEVNDLGEEEEEEEEEDEEEEEDDDDDE 288

Query: 282 ISNEEQTPLLKKINPTESTSKAEENEKVDSKVKAFKKPLSVFKGP 326
           + +E +          E  S   EN   + +++  +KP  + + P
Sbjct: 289 LEDEGE----------EEASMPNENSVKEPEIRCDEKPEDLLEEP 323


>gi|20336258 retinoblastoma protein-binding zinc finger protein
           isoform a [Homo sapiens]
          Length = 1718

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 11/105 (10%)

Query: 222 VSVEYLPPHMGGTDPFKYSYPPLVDDDFQTPLCENGPITSEDETSSKEDIESDGKETLET 281
           V+ + +PP +    P  +   P  D+  +   CE   +  E+E   +ED E +  +  + 
Sbjct: 230 VASQEVPPELATPAP-AWEPQPEPDERLEAAACEVNDLGEEEEEEEEEDEEEEEDDDDDE 288

Query: 282 ISNEEQTPLLKKINPTESTSKAEENEKVDSKVKAFKKPLSVFKGP 326
           + +E +          E  S   EN   + +++  +KP  + + P
Sbjct: 289 LEDEGE----------EEASMPNENSVKEPEIRCDEKPEDLLEEP 323


>gi|156071450 nardilysin isoform a [Homo sapiens]
          Length = 1219

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 10/123 (8%)

Query: 246 DDDFQTPLCENGPITSEDETSSKEDIESDGKETLETISNEEQTPLLKKINPTESTSKAEE 305
           DD+ +  + E      ED  +  ED + +G +  +   +E    L      TE     E 
Sbjct: 142 DDEEEEEVEEEEEDDDEDSGAEIEDDDEEGFDDEDEFDDEHDDDL-----DTEDNELEEL 196

Query: 306 NEKVDSKVKAFKKP--LSVFKGPLLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFK 363
            E+ +++ K  +K    S+F   LL     + L+F ST S    TL+V T     +V  +
Sbjct: 197 EERAEARKKTTEKQQLQSLF---LLWSKLTDRLWFKSTYSKMSSTLLVETRNLYGVVGAE 253

Query: 364 VRT 366
            R+
Sbjct: 254 SRS 256


>gi|51317366 myosin XVIIIB [Homo sapiens]
          Length = 2567

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 15/109 (13%)

Query: 233  GTDPFKYSYPPL-------VD-DDF-------QTPLCENGPITSEDETSSKEDIESDGKE 277
            G+DPF +  P L       VD DDF       QTP    G      + S +  I  + +E
Sbjct: 2420 GSDPFSWKLPSLDYERKTKVDFDDFLPAIRKPQTPTSLAGSAKGGQDGSQRSSIHFETEE 2479

Query: 278  TLETISNEEQTPLLKKINPTESTSKAEENEKVDSKVKAFKKPLSVFKGP 326
               +  +  +T L K   P E  +   ++      + +FK   S+   P
Sbjct: 2480 ANRSFLSGIKTILKKSPEPKEDPAHLSDSSSSSGSIVSFKSADSIKSRP 2528


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,406,219
Number of Sequences: 37866
Number of extensions: 888704
Number of successful extensions: 3288
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 3213
Number of HSP's gapped (non-prelim): 141
length of query: 518
length of database: 18,247,518
effective HSP length: 107
effective length of query: 411
effective length of database: 14,195,856
effective search space: 5834496816
effective search space used: 5834496816
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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