Guide to the Human Genome
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Name: SEC14L4 Sequence: fasta or formatted (406aa) NCBI GI: 28376621
Description:

SEC14p-like protein TAP3 isoform a

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [360aa] SEC14p-like protein TAP3 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         17           1
 C cysteine            2.0          8           1
 D aspartate           5.4         22           2
 E glutamate           7.4         30           2
 F phenylalanine       4.4         18           2
 G glycine             6.2         25           2
 H histidine           1.5          6           1
 I isoleucine          4.2         17           2
 K lysine              6.2         25           2
 L leucine            12.6         51           3
 M methionine          3.4         14           1
 N asparagine          3.4         14           1
 P proline             5.4         22           2
 Q glutamine           6.4         26           3
 R arginine            5.9         24           2
 S serine              6.4         26           2
 T threonine           3.9         16           1
 V valine              6.2         25           1
 W tryptophan          1.2          5           1
 Y tyrosine            3.7         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SEC14p-like protein TAP3 isoform a 
SEC14L4               0.888   SEC14p-like protein TAP3 isoform b 
LOC730005             0.798   PREDICTED: similar to SEC14p-like protein TAP3 [Hom...
LOC730005             0.796   PREDICTED: similar to SEC14p-like protein TAP3 [Hom...
LOC730005             0.796   PREDICTED: similar to SEC14p-like protein TAP3 [Hom...
SEC14L2               0.738   SEC14-like 2 isoform 1 
SEC14L3               0.732   SEC14-like 3 
SEC14L2               0.665   SEC14-like 2 isoform 2 
SEC14L5               0.208   SEC14-like 5 
SEC14L1               0.204   SEC14 (S. cerevisiae)-like 1 isoform c 
SEC14L1               0.204   SEC14 (S. cerevisiae)-like 1 isoform a 
SEC14L1               0.204   SEC14 (S. cerevisiae)-like 1 isoform a 
SEC14L1               0.204   SEC14 (S. cerevisiae)-like 1 isoform b 
SEC14L1               0.204   SEC14 (S. cerevisiae)-like 1 isoform a 
TTPA                  0.088   tocopherol (alpha) transfer protein 
RLBP1L2               0.054   retinaldehyde binding protein 1-like 2 
RLBP1L1               0.053   retinaldehyde binding protein 1-like 1 
TTPAL                 0.043   tocopherol (alpha) transfer protein-like 
TTPAL                 0.043   tocopherol (alpha) transfer protein-like 
RLBP1                 0.040   retinaldehyde binding protein 1 
ACBD3                 0.035   acyl-Coenzyme A binding domain containing 3 
FYCO1                 0.034   FYVE and coiled-coil domain containing 1 
TMED8                 0.019   transmembrane emp24 protein transport domain contain...
MOSPD2                0.016   motile sperm domain containing 2 
EFCAB6                0.009   CAP-binding protein complex interacting protein 1 is...
EFCAB6                0.009   CAP-binding protein complex interacting protein 1 is...
KCNH7                 0.006   potassium voltage-gated channel, subfamily H, member...
MYBPC3                0.005   myosin binding protein C, cardiac 
FLJ41350              0.005   PREDICTED: hypothetical protein isoform 2 
FLJ41350              0.005   PREDICTED: hypothetical protein isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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