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Search of human proteins with 22748787
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22748787 hypothetical protein LOC126695 [Homo sapiens]
(398 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22748787 hypothetical protein LOC126695 [Homo sapiens] 837 0.0
gi|150170670 piccolo isoform 2 [Homo sapiens] 38 0.018
gi|150378539 piccolo isoform 1 [Homo sapiens] 38 0.018
gi|40353727 synaptopodin isoform A [Homo sapiens] 35 0.091
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 35 0.12
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens] 35 0.12
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 35 0.12
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 35 0.12
gi|19913396 smoothelin isoform b [Homo sapiens] 35 0.12
gi|19913394 smoothelin isoform c [Homo sapiens] 35 0.12
gi|24497513 homeobox A3 isoform a [Homo sapiens] 35 0.16
gi|13562112 homeobox A3 isoform a [Homo sapiens] 35 0.16
gi|169171347 PREDICTED: hypothetical protein [Homo sapiens] 35 0.16
gi|73747840 LON peptidase N-terminal domain and ring finger 3 is... 35 0.16
gi|37622896 LON peptidase N-terminal domain and ring finger 3 is... 35 0.16
gi|46094081 development and differentiation enhancing factor 1 [... 34 0.20
gi|71774083 myc proto-oncogene protein [Homo sapiens] 34 0.27
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 34 0.27
gi|58219048 hairy and enhancer of split 5 [Homo sapiens] 34 0.27
gi|51173722 bromodomain and PHD finger-containing protein 1 isof... 34 0.27
gi|51173720 bromodomain and PHD finger-containing protein 1 isof... 34 0.27
gi|71274186 hypothetical protein LOC85449 [Homo sapiens] 33 0.35
gi|150418007 RAN binding protein 2 [Homo sapiens] 33 0.45
gi|38569460 SNF1-like kinase 2 [Homo sapiens] 33 0.45
gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens] 33 0.45
gi|33356148 formin-like 1 [Homo sapiens] 33 0.45
gi|19913398 smoothelin isoform a [Homo sapiens] 33 0.45
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 33 0.59
gi|148613878 acrosin precursor [Homo sapiens] 33 0.59
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 32 0.77
>gi|22748787 hypothetical protein LOC126695 [Homo sapiens]
Length = 398
Score = 837 bits (2162), Expect = 0.0
Identities = 398/398 (100%), Positives = 398/398 (100%)
Query: 1 MPRPGHPRPASGPPRLGPWERPTELCLETYDKPPQPPPSRRTRRPDPKDPGHHGPESITF 60
MPRPGHPRPASGPPRLGPWERPTELCLETYDKPPQPPPSRRTRRPDPKDPGHHGPESITF
Sbjct: 1 MPRPGHPRPASGPPRLGPWERPTELCLETYDKPPQPPPSRRTRRPDPKDPGHHGPESITF 60
Query: 61 ISGSAEPALESPTCCLLWRPWVWEWCRAAFCFRRCRDCLQRCGACVRGCSPCLSTEDSTE 120
ISGSAEPALESPTCCLLWRPWVWEWCRAAFCFRRCRDCLQRCGACVRGCSPCLSTEDSTE
Sbjct: 61 ISGSAEPALESPTCCLLWRPWVWEWCRAAFCFRRCRDCLQRCGACVRGCSPCLSTEDSTE 120
Query: 121 GTAEANWAKEHNGVPPSPDRAPPSRRDGQQLKSTMGSSFSYPDVKLKGIPVYPYPRATSP 180
GTAEANWAKEHNGVPPSPDRAPPSRRDGQQLKSTMGSSFSYPDVKLKGIPVYPYPRATSP
Sbjct: 121 GTAEANWAKEHNGVPPSPDRAPPSRRDGQQLKSTMGSSFSYPDVKLKGIPVYPYPRATSP 180
Query: 181 APDADSCCKEPLADPPPMRHSLPSTFASSPRGSEEYYSFHESDLDLPEMGSGSMSSREID 240
APDADSCCKEPLADPPPMRHSLPSTFASSPRGSEEYYSFHESDLDLPEMGSGSMSSREID
Sbjct: 181 APDADSCCKEPLADPPPMRHSLPSTFASSPRGSEEYYSFHESDLDLPEMGSGSMSSREID 240
Query: 241 VLIFKKLTELFSVHQIDELAKCTSDTVFLEKTSKISDLISSITQDYHLDEQDAEGRLVRG 300
VLIFKKLTELFSVHQIDELAKCTSDTVFLEKTSKISDLISSITQDYHLDEQDAEGRLVRG
Sbjct: 241 VLIFKKLTELFSVHQIDELAKCTSDTVFLEKTSKISDLISSITQDYHLDEQDAEGRLVRG 300
Query: 301 IIRISTRKSRARPQTSEGRSTRAAAPTAAAPDSGHETMVGSGLSQDELTVQISQETTADA 360
IIRISTRKSRARPQTSEGRSTRAAAPTAAAPDSGHETMVGSGLSQDELTVQISQETTADA
Sbjct: 301 IIRISTRKSRARPQTSEGRSTRAAAPTAAAPDSGHETMVGSGLSQDELTVQISQETTADA 360
Query: 361 IARKLRPYGAPGYPASHDSSFQGTDTDSSGAPLLQVYC 398
IARKLRPYGAPGYPASHDSSFQGTDTDSSGAPLLQVYC
Sbjct: 361 IARKLRPYGAPGYPASHDSSFQGTDTDSSGAPLLQVYC 398
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 37.7 bits (86), Expect = 0.018
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 2 PRPGHPRPASGPPRL-GPWERPTELCLETYDKPPQPPPSRRTRRPDPKDPGHHGPESITF 60
P P P PA PP+ G + P++ T P QP P+ +P P+ PG P S
Sbjct: 479 PPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPA----KPSPQQPGSTKPPSQQ- 533
Query: 61 ISGSAEPALESPT 73
GSA+P+ + P+
Sbjct: 534 -PGSAKPSAQQPS 545
Score = 29.6 bits (65), Expect = 5.0
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 5 GHPRPASGPPRLGPWERPTELCLETYDKPPQPPPSRRTRRPDPKDP 50
G P +S P + P+ R + L + PP PPP P P P
Sbjct: 2379 GSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPP 2424
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 37.7 bits (86), Expect = 0.018
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 2 PRPGHPRPASGPPRL-GPWERPTELCLETYDKPPQPPPSRRTRRPDPKDPGHHGPESITF 60
P P P PA PP+ G + P++ T P QP P+ +P P+ PG P S
Sbjct: 479 PPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPA----KPSPQQPGSTKPPSQQ- 533
Query: 61 ISGSAEPALESPT 73
GSA+P+ + P+
Sbjct: 534 -PGSAKPSAQQPS 545
Score = 29.6 bits (65), Expect = 5.0
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 5 GHPRPASGPPRLGPWERPTELCLETYDKPPQPPPSRRTRRPDPKDP 50
G P +S P + P+ R + L + PP PPP P P P
Sbjct: 2379 GSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPP 2424
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 35.4 bits (80), Expect = 0.091
Identities = 23/70 (32%), Positives = 25/70 (35%), Gaps = 13/70 (18%)
Query: 6 HPRPASGPPRLGPWERPTELCLETYDKPPQPPPSRRTRRPDPKDPGHHGPESITFISGSA 65
+PRP S PPR P PP PPP R R P P PG F
Sbjct: 779 NPRPFS-PPRAPP------------PPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPR 825
Query: 66 EPALESPTCC 75
P P+ C
Sbjct: 826 SPLPAGPSSC 835
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 35.0 bits (79), Expect = 0.12
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 133 GVPPSPDRAPPSRRDGQQLKSTMGSSFSYPDVKLKGIPVYPY-PRATSPAPDADSCCKEP 191
G PP P R+P S G L S+ S P+ +L+G P A SP PDA+ P
Sbjct: 610 GPPPPPSRSPSSTLSGPDLAGHSSSATSTPE-ELRGYDSGPEGGAAASPPPDAELAACHP 668
Query: 192 LA----DPPPMRH------SLPSTFASSPRGSEEYYSFHESD 223
A PP+ LP A+ P ++ + +E++
Sbjct: 669 AAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETE 710
>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 389
Score = 35.0 bits (79), Expect = 0.12
Identities = 18/54 (33%), Positives = 21/54 (38%)
Query: 5 GHPRPASGPPRLGPWERPTELCLETYDKPPQPPPSRRTRRPDPKDPGHHGPESI 58
G PRP + PPR P RP PP+P P R P P P +
Sbjct: 148 GEPRPYALPPRESPAPRPFRWGDPFSPAPPRPQPPSRPAAQPPSRPAFRSPRPV 201
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 35.0 bits (79), Expect = 0.12
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 133 GVPPSPDRAPPSRRDGQQLKSTMGSSFSYPDVKLKGIPVYPY-PRATSPAPDADSCCKEP 191
G PP P R+P S G L S+ S P+ +L+G P A SP PDA+ P
Sbjct: 879 GPPPPPSRSPSSTLSGPDLAGHSSSATSTPE-ELRGYDSGPEGGAAASPPPDAELAACHP 937
Query: 192 LA----DPPPMRH------SLPSTFASSPRGSEEYYSFHESD 223
A PP+ LP A+ P ++ + +E++
Sbjct: 938 AAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETE 979
Score = 30.8 bits (68), Expect = 2.2
Identities = 47/212 (22%), Positives = 62/212 (29%), Gaps = 51/212 (24%)
Query: 2 PRPGHPRPASGPPRLGPWERPTELCLETYDKPPQP---PPSRRTRRPDPKDPGHHGPESI 58
P G P P P P + P L L PP P PP P P+ P ++
Sbjct: 602 PLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAP---NALAV 658
Query: 59 TFISGSAEPALESPTCCLLWRPWVWEWCRAAFCFRRCRDCLQRCGACVRGCSPCLSTEDS 118
+ P P P SP +S +
Sbjct: 659 HLLQAPFSPPPSPPVQAPFSPP----------------------------ASPPVSPSAT 690
Query: 119 TEGTAEANWAKEHNGVPPSPDRAPPSRRDGQQLKSTMGSSFSYPDVKLKGIPVYPYPRAT 178
A + A VPPSP +PP S + P + + V P P A+
Sbjct: 691 PPSQAPPSLAAPPLQVPPSPPASPP------MSPSATPPPQAPPPLAAPPLQVPPSPPAS 744
Query: 179 SPAPDADSCCKEPLADPPPMRHSLPSTFASSP 210
P P A PPP +P A+ P
Sbjct: 745 PP--------MSPSATPPP---RVPPLLAAPP 765
Score = 29.6 bits (65), Expect = 5.0
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 9/67 (13%)
Query: 7 PRPASGPPRLGPWERPTELCLETYDKPPQP--PPSRRTRRPDPKDPGHHGPESITFISGS 64
P PA+ PP P P L PP P PPS +T P P P S+T
Sbjct: 326 PLPATLPPS-PPLATPLPLA------PPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQ 378
Query: 65 AEPALES 71
A P+L++
Sbjct: 379 APPSLQT 385
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 35.0 bits (79), Expect = 0.12
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 133 GVPPSPDRAPPSRRDGQQLKSTMGSSFSYPDVKLKGIPVYPY-PRATSPAPDADSCCKEP 191
G PP P R+P S G L S+ S P+ +L+G P A SP PDA+ P
Sbjct: 571 GPPPPPSRSPSSTLSGPDLAGHSSSATSTPE-ELRGYDSGPEGGAAASPPPDAELAACHP 629
Query: 192 LA----DPPPMRH------SLPSTFASSPRGSEEYYSFHESD 223
A PP+ LP A+ P ++ + +E++
Sbjct: 630 AAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETE 671
>gi|19913396 smoothelin isoform b [Homo sapiens]
Length = 915
Score = 35.0 bits (79), Expect = 0.12
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 7 PRPASGPPRLGPWERPTELCLETYDKPPQPPPSRRTRRPDPKD----PGHHGPESITFIS 62
P PAS P L P E L E P PP +T P+P++ P G +S
Sbjct: 209 PTPASPEPPLEPAEAQC-LTAEVPGSPEPPPSPPKTTSPEPQESPTLPSTEGQVVNKLLS 267
Query: 63 GSAE-PALESPT 73
G E PA +SPT
Sbjct: 268 GPKETPAAQSPT 279
>gi|19913394 smoothelin isoform c [Homo sapiens]
Length = 917
Score = 35.0 bits (79), Expect = 0.12
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 7 PRPASGPPRLGPWERPTELCLETYDKPPQPPPSRRTRRPDPKD----PGHHGPESITFIS 62
P PAS P L P E L E P PP +T P+P++ P G +S
Sbjct: 209 PTPASPEPPLEPAEAQC-LTAEVPGSPEPPPSPPKTTSPEPQESPTLPSTEGQVVNKLLS 267
Query: 63 GSAE-PALESPT 73
G E PA +SPT
Sbjct: 268 GPKETPAAQSPT 279
>gi|24497513 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 34.7 bits (78), Expect = 0.16
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 8/84 (9%)
Query: 9 PASGPPRLG--PWERPTELCLETYDKPPQP---PPSRRTRRPDPKD---PGHHGPESITF 60
P S PP LG P P +PPQP PP+ P P P + + T
Sbjct: 78 PPSQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQPPAPTPAAPPPPSSASPPQNASNNPTP 137
Query: 61 ISGSAEPALESPTCCLLWRPWVWE 84
+ + P L SPT PW+ E
Sbjct: 138 ANAAKSPLLNSPTVAKQIFPWMKE 161
>gi|13562112 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 34.7 bits (78), Expect = 0.16
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 8/84 (9%)
Query: 9 PASGPPRLG--PWERPTELCLETYDKPPQP---PPSRRTRRPDPKD---PGHHGPESITF 60
P S PP LG P P +PPQP PP+ P P P + + T
Sbjct: 78 PPSQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQPPAPTPAAPPPPSSASPPQNASNNPTP 137
Query: 61 ISGSAEPALESPTCCLLWRPWVWE 84
+ + P L SPT PW+ E
Sbjct: 138 ANAAKSPLLNSPTVAKQIFPWMKE 161
>gi|169171347 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1128
Score = 34.7 bits (78), Expect = 0.16
Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 1 MPRPGHPRPASGPPRLGPWERPTELCLETYDKPPQPPPSRRTRRPDPK-DPGHHG 54
+P PGH RP R P +E E+ PPQP P RR R P PG G
Sbjct: 244 LPSPGHTRPLPARGRREPEAGESEARPES---PPQPQPRRRLARRGPSASPGSWG 295
>gi|73747840 LON peptidase N-terminal domain and ring finger 3
isoform 1 [Homo sapiens]
Length = 759
Score = 34.7 bits (78), Expect = 0.16
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 38 PSRRTRRPDPKDPGHHGPESITFISGSAEPALESPTCCLLWRPWVWEWCRAAFCFR---R 94
P++ +++ P D G S+ S A LE C L+ V C FC + R
Sbjct: 435 PNKASKQDPPTDQGDKPALSLPLASFDASD-LECALCMRLFYEPVTTPCGHTFCLKCLER 493
Query: 95 CRDCLQRCGACVRGCSPCLST 115
C D +C C G S CL++
Sbjct: 494 CLDHNAKCPLCKDGLSQCLAS 514
>gi|37622896 LON peptidase N-terminal domain and ring finger 3
isoform 2 [Homo sapiens]
Length = 718
Score = 34.7 bits (78), Expect = 0.16
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 38 PSRRTRRPDPKDPGHHGPESITFISGSAEPALESPTCCLLWRPWVWEWCRAAFCFR---R 94
P++ +++ P D G S+ S A LE C L+ V C FC + R
Sbjct: 394 PNKASKQDPPTDQGDKPALSLPLASFDASD-LECALCMRLFYEPVTTPCGHTFCLKCLER 452
Query: 95 CRDCLQRCGACVRGCSPCLST 115
C D +C C G S CL++
Sbjct: 453 CLDHNAKCPLCKDGLSQCLAS 473
>gi|46094081 development and differentiation enhancing factor 1
[Homo sapiens]
Length = 1129
Score = 34.3 bits (77), Expect = 0.20
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 11 SGPPRLGPWERPTELCLETYDK--PPQPPPSRRTRRPDPKDPGHHGP 55
+GPP P T T K PP PPP + DP P HGP
Sbjct: 803 TGPPSTLPLSTQTSSGSSTLSKKRPPPPPPGHKRTLSDPPSPLPHGP 849
>gi|71774083 myc proto-oncogene protein [Homo sapiens]
Length = 454
Score = 33.9 bits (76), Expect = 0.27
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 171 VYPYPRATSPAPDADSCCKEPLADPPPMRHSLPSTFASSPRGSEEYYSFHESDLDLPEMG 230
V+PYP S +P SC + + P SL S+ SSP+GS E HE P
Sbjct: 209 VFPYPLNDSSSPK--SCASQDSSAFSPSSDSLLSSTESSPQGSPEPLVLHEE--TPPTTS 264
Query: 231 SGSMSSR----EIDVLIFKK 246
S S + EIDV+ +K
Sbjct: 265 SDSEEEQEDEEEIDVVSVEK 284
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 33.9 bits (76), Expect = 0.27
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 1 MPRPGHPRPASGPPRL-GPWERPTEL---CLETYDKPPQPPPSRRTRRPDPKDPGHHGPE 56
+P P PRPA GP R GP E P ++ +PP+ P + R P P P P
Sbjct: 404 LPVPSQPRPAVGPQRFPGPPEFPQHTPGPVPNSFSQPPRLPLQDQWRAPPP--PQDRDP- 460
Query: 57 SITFISGSAEPALES 71
F+ S EP S
Sbjct: 461 --FFLGVSGEPRFPS 473
>gi|58219048 hairy and enhancer of split 5 [Homo sapiens]
Length = 166
Score = 33.9 bits (76), Expect = 0.27
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 35 QPPPSRRTRRPDPKDPGHHGPESITFISGSAEPALESPTCCLLWRPW 81
+PP + +PK PG P +++ + +A A P C LWRPW
Sbjct: 121 RPPAAPAAPAKEPKAPGAAPPPALSAKATAAAAAAHQPACG-LWRPW 166
>gi|51173722 bromodomain and PHD finger-containing protein 1 isoform 2
[Homo sapiens]
Length = 1214
Score = 33.9 bits (76), Expect = 0.27
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Query: 135 PPSPDRAPPSRRDGQQLKSTMGSSFSYPDVK-LKGIPVYPYPRATSPAPDADSCCKEPLA 193
PP PP R+ Q S GS P + + + R+ P+ +DS +
Sbjct: 904 PPKRPGRPPKNRESQMTPSHGGSPVGPPQLPIMSSLRQRKRGRSPRPSSSSDSDSDKSTE 963
Query: 194 DPPPMRHSLPST-FASSPRGSEEYYSFHESDLDLPEMGSGSMSS 236
DPP LP+ F+ + ++ + + +D LP S S SS
Sbjct: 964 DPP---MDLPANGFSGGNQPVKKSFLVYRNDCSLPRSSSDSESS 1004
>gi|51173720 bromodomain and PHD finger-containing protein 1 isoform 1
[Homo sapiens]
Length = 1220
Score = 33.9 bits (76), Expect = 0.27
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Query: 135 PPSPDRAPPSRRDGQQLKSTMGSSFSYPDVK-LKGIPVYPYPRATSPAPDADSCCKEPLA 193
PP PP R+ Q S GS P + + + R+ P+ +DS +
Sbjct: 910 PPKRPGRPPKNRESQMTPSHGGSPVGPPQLPIMSSLRQRKRGRSPRPSSSSDSDSDKSTE 969
Query: 194 DPPPMRHSLPST-FASSPRGSEEYYSFHESDLDLPEMGSGSMSS 236
DPP LP+ F+ + ++ + + +D LP S S SS
Sbjct: 970 DPP---MDLPANGFSGGNQPVKKSFLVYRNDCSLPRSSSDSESS 1010
>gi|71274186 hypothetical protein LOC85449 [Homo sapiens]
Length = 1200
Score = 33.5 bits (75), Expect = 0.35
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 17/90 (18%)
Query: 3 RPGHPRPASGPPRLGPWE-----RPTELCLETYDK-----PPQPPPSRRTRRPDPKDPGH 52
RPG PR AS P RL P T++ ++T ++ P P PSR T P+P PG
Sbjct: 414 RPG-PRQASSP-RLSPASPAAAASETKIEVKTKERNGRLPKPMPCPSRNTSSPEPPTPG- 470
Query: 53 HGPESITFISGSAEPALESPTCCLLWR-PW 81
+F+ G +P++ L PW
Sbjct: 471 ---LKFSFLRGQRQPSVTPEKASLQHNGPW 497
>gi|150418007 RAN binding protein 2 [Homo sapiens]
Length = 3224
Score = 33.1 bits (74), Expect = 0.45
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 171 VYPYPRA--TSPAPDADSCC-KEPLADPPPMRHSLPSTFASSPRGSEEYYSFH----ESD 223
+Y YP+ T P + +C + + PP +R P+T SPRG ++Y++++ ++
Sbjct: 914 IYAYPQQMHTPPVQSSSACMFSQEMYGPPALRFESPATGILSPRG-DDYFNYNVQQTSTN 972
Query: 224 LDLPEMG 230
LPE G
Sbjct: 973 PPLPEPG 979
>gi|38569460 SNF1-like kinase 2 [Homo sapiens]
Length = 926
Score = 33.1 bits (74), Expect = 0.45
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 16/75 (21%)
Query: 7 PRPASGPPRLGPWERPTELCLETYDKPPQPPPSRRTRRPDPKDPGHHGPESITF------ 60
P P++ PR P PT+L + PP PPP P+ PG P + F
Sbjct: 801 PLPSTSGPRAAP-PLPTQLQQQQPPPPPPPPP--------PRQPG-AAPAPLQFSYQTCE 850
Query: 61 ISGSAEPALESPTCC 75
+ +A PA + PT C
Sbjct: 851 LPSAASPAPDYPTPC 865
Score = 31.2 bits (69), Expect = 1.7
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 11/58 (18%)
Query: 135 PPSPDRAPPSRRDGQQLKSTMGSSFSYPDVKLKGIPVYPYPRATSPAPDADSCCKEPL 192
PP P PP R+ G + FSY +L P A SPAPD + C+ P+
Sbjct: 823 PPPPPPPPPPRQPGA---APAPLQFSYQTCEL--------PSAASPAPDYPTPCQYPV 869
>gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]
Length = 2608
Score = 33.1 bits (74), Expect = 0.45
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 9/47 (19%)
Query: 4 PGHPRPASGPPRLGPWERPTELCLETYDKPPQPPPSRRTRRPDPKDP 50
PG P PA+GP +L P P + P+PP S T P P P
Sbjct: 978 PGAPSPAAGPTKLPPCCHPPD---------PKPPASSPTPPPRPSAP 1015
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 33.1 bits (74), Expect = 0.45
Identities = 19/54 (35%), Positives = 19/54 (35%)
Query: 2 PRPGHPRPASGPPRLGPWERPTELCLETYDKPPQPPPSRRTRRPDPKDPGHHGP 55
P PG P P PP P P E PP P P P PG GP
Sbjct: 547 PLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGP 600
Score = 31.6 bits (70), Expect = 1.3
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 10/49 (20%)
Query: 2 PRPGHPRPASGPPRLGPWERPTELCLETYDKPPQPPPSRRTRRPDPKDP 50
P PG P P PP G P PP PPP T P P P
Sbjct: 567 PLPGSPEPPPAPPLPGDLPPP----------PPPPPPPPGTDGPVPPPP 605
>gi|19913398 smoothelin isoform a [Homo sapiens]
Length = 940
Score = 33.1 bits (74), Expect = 0.45
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 7 PRPASGPPRLGPWERPTELCLETYDKPPQPPPSRRTRRPDPKD----PGHHGPESITFIS 62
P PAS P L P E L E P PP +T P+P++ P G +S
Sbjct: 209 PTPASPEPPLEPAEAQC-LTAEVPGSPEPPPSPPKTTSPEPQESPTLPSTEGQVVNKLLS 267
Query: 63 GSAE-PALESP 72
G E PA +SP
Sbjct: 268 GPKETPAAQSP 278
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 32.7 bits (73), Expect = 0.59
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 2 PRPGHPRPASGPPRLGP--WERPTELCLETYDKPPQPPPSRRTRRPDPKDPGHHGP 55
P PG P PA P + P + PT + T D PPP+ RP P D G +GP
Sbjct: 346 PPPGAPPPA---PHVNPAFFPPPTNSGMPTSDSRG-PPPTDPYGRPPPYDRGDYGP 397
Score = 30.0 bits (66), Expect = 3.8
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 8/57 (14%)
Query: 4 PGHPRPASGPPRLGPWERPTELCLETYDKPPQPPPSRRTRRP-----DPKDPGHHGP 55
PG P G P LGP + Y PP PPP ++ P P+ PG GP
Sbjct: 280 PGQP---FGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGP 333
>gi|148613878 acrosin precursor [Homo sapiens]
Length = 421
Score = 32.7 bits (73), Expect = 0.59
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 13/58 (22%)
Query: 2 PRPGHPRPASGPPRLGPWERPTELCLETYDKPPQPPPSRRTRRPDPKDPGHHGPESIT 59
PRP PRP + PR P PP PPP + P P P P S T
Sbjct: 332 PRPLPPRPPAAQPRPPP-------------SPPPPPPPPASPLPPPPPPPPPTPSSTT 376
Score = 29.6 bits (65), Expect = 5.0
Identities = 22/83 (26%), Positives = 28/83 (33%), Gaps = 2/83 (2%)
Query: 132 NGVPPSPDRAPPSRRD--GQQLKSTMGSSFSYPDVKLKGIPVYPYPRATSPAPDADSCCK 189
+ PP P PP R + + + F P L P PR P
Sbjct: 299 SATPPPPTTRPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPRPPPSPPPPPPPPA 358
Query: 190 EPLADPPPMRHSLPSTFASSPRG 212
PL PPP PS+ P+G
Sbjct: 359 SPLPPPPPPPPPTPSSTTKLPQG 381
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 32.3 bits (72), Expect = 0.77
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 128 AKEHNGVPPSPDRAPPSRRDGQQLKSTMGSSFSYPDVKLKGIPVYPYPRATSPAPDADSC 187
A + PP APP+ Q SS + P+ P P AT+PAP + S
Sbjct: 178 APPSSSAPPETTAAPPTPSATTQAPP---SSSAPPETTAAP----PTPPATTPAPPSSSA 230
Query: 188 CKEPLADPPPMRHSLPSTFASS 209
E A PP + P+ +SS
Sbjct: 231 PPETTAAPPTPSATTPAPLSSS 252
Score = 30.0 bits (66), Expect = 3.8
Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 15/94 (15%)
Query: 118 STEGTAEANWAKEHNGVPPSPDRAPPSRRDGQQLKSTMGSSFSYPDVKLKGIPVYPYPRA 177
+T+ ++ E PP+P P+ T + P P A
Sbjct: 198 TTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAP--------------PTPSA 243
Query: 178 TSPAPDADSCCKEPLADPP-PMRHSLPSTFASSP 210
T+PAP + S E A PP P +L + AS+P
Sbjct: 244 TTPAPLSSSAPPETTAVPPTPSATTLDPSSASAP 277
Score = 28.9 bits (63), Expect = 8.5
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 132 NGVPPSPDRAPPSRRDGQQLKSTMGSSFSYPDVKLKGIPVYPYPRATSPAPDADSCCKEP 191
+ PP PP+ +T+ S + + P P P AT+PAP + +E
Sbjct: 251 SSAPPETTAVPPTPS-----ATTLDPSSASAPPETTAAP--PTPSATTPAPPSSPAPQET 303
Query: 192 LADPPPMRHSLPSTFA 207
A P +S P+T A
Sbjct: 304 TAAPITTPNSSPTTLA 319
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,639,558
Number of Sequences: 37866
Number of extensions: 1261346
Number of successful extensions: 5673
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 171
Number of HSP's that attempted gapping in prelim test: 5272
Number of HSP's gapped (non-prelim): 567
length of query: 398
length of database: 18,247,518
effective HSP length: 104
effective length of query: 294
effective length of database: 14,309,454
effective search space: 4206979476
effective search space used: 4206979476
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.