Guide to the Human Genome
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Name: KIAA1755 Sequence: fasta or formatted (1200aa) NCBI GI: 71274186
Description:

hypothetical protein LOC85449

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3        124           4
 C cysteine            2.0         24           1
 D aspartate           3.8         46           2
 E glutamate           8.2         99           3
 F phenylalanine       3.2         39           2
 G glycine             6.9         83           2
 H histidine           2.4         29           2
 I isoleucine          1.8         22           1
 K lysine              4.2         50           2
 L leucine            12.2        146           3
 M methionine          1.3         16           1
 N asparagine          1.8         22           1
 P proline             9.0        108           2
 Q glutamine           6.0         72           2
 R arginine            6.4         77           2
 S serine              8.2         98           2
 T threonine           4.8         57           2
 V valine              4.8         58           3
 W tryptophan          1.1         13           1
 Y tyrosine            1.4         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC85449 
FLJ10357              0.098   hypothetical protein LOC55701 
PLEKHG4               0.068   pleckstrin homology domain containing, family G (wi...
PLEKHG4               0.068   pleckstrin homology domain containing, family G (wi...
PLEKHG4               0.068   pleckstrin homology domain containing, family G (wi...
PLEKHG4               0.068   pleckstrin homology domain containing, family G (wit...
PLEKHG4               0.066   pleckstrin homology domain containing, family G (wi...
PLEKHG4B              0.064   pleckstrin homology domain containing, family G (wi...
MCF2L                 0.025   MCF.2 cell line derived transforming sequence-like ...
MCF2L                 0.025   MCF.2 cell line derived transforming sequence-like ...
TRIO                  0.019   triple functional domain (PTPRF interacting) 
KALRN                 0.018   kalirin, RhoGEF kinase isoform 1 
KALRN                 0.018   kalirin, RhoGEF kinase isoform 2 
SESTD1                0.015   SEC14 and spectrin domains 1 
MCF2                  0.014   MCF.2 cell line derived transforming sequence isofo...
MCF2L2                0.013   Rho family guanine-nucleotide exchange factor 
BSN                   0.012   bassoon protein 
SRRM1                 0.011   serine/arginine repetitive matrix 1 
CASKIN1               0.011   CASK interacting protein 1 
ZNF828                0.010   zinc finger protein 828 
FLJ22184              0.009   PREDICTED: hypothetical protein LOC80164 
TENC1                 0.009   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.009   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.009   tensin like C1 domain containing phosphatase isoform...
MCF2                  0.009   MCF.2 cell line derived transforming sequence isofo...
FLJ22184              0.008   PREDICTED: hypothetical protein FLJ22184 
SRRM2                 0.008   splicing coactivator subunit SRm300 
SYN1                  0.008   synapsin I isoform Ia 
SYN1                  0.008   synapsin I isoform Ib 
ANO8                  0.008   anoctamin 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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