Guide to the Human Genome
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Name: SH3YL1 Sequence: fasta or formatted (323aa) NCBI GI: 227430338
Description:

SH3 domain containing, Ysc84-like 1 isoform 2

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [342aa] SH3 domain containing, Ysc84-like 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         32           2
 C cysteine            0.9          3           1
 D aspartate           4.0         13           1
 E glutamate           6.2         20           1
 F phenylalanine       4.0         13           1
 G glycine             9.9         32           3
 H histidine           0.6          2           1
 I isoleucine          7.4         24           2
 K lysine              6.2         20           2
 L leucine             8.7         28           1
 M methionine          0.6          2           1
 N asparagine          5.6         18           2
 P proline             5.3         17           2
 Q glutamine           4.0         13           2
 R arginine            5.9         19           1
 S serine              7.7         25           2
 T threonine           4.3         14           1
 V valine              5.3         17           2
 W tryptophan          0.9          3           2
 Y tyrosine            2.5          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH3 domain containing, Ysc84-like 1 isoform 2 [Homo... 
SH3YL1                0.982   SH3 domain containing, Ysc84-like 1 isoform 1 [Homo...
SH3GL1                0.060   SH3-domain GRB2-like 1 
GRB2                  0.059   growth factor receptor-bound protein 2 isoform 1 [Hom...
GRB2                  0.059   growth factor receptor-bound protein 2 isoform 2 [Ho...
SH3GL3                0.059   SH3-domain GRB2-like 3 
NCF2                  0.055   neutrophil cytosolic factor 2 
NCF2                  0.055   neutrophil cytosolic factor 2 
SH3GL2                0.052   SH3-domain GRB2-like 2 
MYO1E                 0.050   myosin IE 
STAC2                 0.049   SH3 and cysteine rich domain 2 
ITSN2                 0.049   intersectin 2 isoform 3 
ITSN2                 0.049   intersectin 2 isoform 1 
ITSN2                 0.049   intersectin 2 isoform 2 
STAC3                 0.049   SH3 and cysteine rich domain 3 
C1orf113              0.047   SH3 domain-containing protein C1orf113 isoform 1 [H...
C1orf113              0.047   SH3 domain-containing protein C1orf113 isoform 2 [H...
ITSN1                 0.047   intersectin 1 isoform ITSN-s 
ITSN1                 0.047   intersectin 1 isoform ITSN-l 
SH3D19                0.047   SH3 domain containing 19 isoform c 
SH3D19                0.047   SH3 domain containing 19 isoform b 
SH3D19                0.047   SH3 domain containing 19 isoform a 
SH3RF3                0.047   SH3 domain containing ring finger 3 
STAM                  0.047   signal transducing adaptor molecule 1 
STAM2                 0.047   signal transducing adaptor molecule 2 
SH3RF1                0.047   SH3 domain containing ring finger 1 
PACSIN2               0.046   protein kinase C and casein kinase substrate in neu...
STAC                  0.046   SH3 and cysteine rich domain 
SKAP1                 0.046   src kinase associated phosphoprotein 1 isoform 2 [H...
PACSIN1               0.044   protein kinase C and casein kinase substrate in neur...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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