Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SH3YL1 Sequence: fasta or formatted (342aa) NCBI GI: 227430336
Description:

SH3 domain containing, Ysc84-like 1 isoform 1

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [323aa] SH3 domain containing, Ysc84-like 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         32           2
 C cysteine            0.9          3           1
 D aspartate           3.8         13           1
 E glutamate           6.4         22           1
 F phenylalanine       3.8         13           1
 G glycine             9.9         34           3
 H histidine           0.9          3           1
 I isoleucine          7.0         24           2
 K lysine              6.1         21           2
 L leucine             8.8         30           1
 M methionine          0.6          2           1
 N asparagine          5.8         20           2
 P proline             5.3         18           2
 Q glutamine           3.8         13           2
 R arginine            6.1         21           1
 S serine              7.9         27           2
 T threonine           4.1         14           1
 V valine              5.3         18           2
 W tryptophan          0.9          3           2
 Y tyrosine            3.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH3 domain containing, Ysc84-like 1 isoform 1 [Homo... 
SH3YL1                0.921   SH3 domain containing, Ysc84-like 1 isoform 2 [Homo...
GRB2                  0.055   growth factor receptor-bound protein 2 isoform 1 [Hom...
GRB2                  0.055   growth factor receptor-bound protein 2 isoform 2 [Ho...
SH3GL1                0.052   SH3-domain GRB2-like 1 
STAM                  0.047   signal transducing adaptor molecule 1 
SH3GL3                0.047   SH3-domain GRB2-like 3 
ITSN2                 0.046   intersectin 2 isoform 3 
ITSN2                 0.046   intersectin 2 isoform 1 
ITSN2                 0.046   intersectin 2 isoform 2 
NCF2                  0.046   neutrophil cytosolic factor 2 
NCF2                  0.046   neutrophil cytosolic factor 2 
STAC3                 0.046   SH3 and cysteine rich domain 3 
ITSN1                 0.044   intersectin 1 isoform ITSN-s 
ITSN1                 0.044   intersectin 1 isoform ITSN-l 
PACSIN2               0.044   protein kinase C and casein kinase substrate in neu...
SH3D19                0.044   SH3 domain containing 19 isoform c 
SH3D19                0.044   SH3 domain containing 19 isoform b 
SH3D19                0.044   SH3 domain containing 19 isoform a 
SH3RF3                0.044   SH3 domain containing ring finger 3 
MYO1E                 0.044   myosin IE 
STAC2                 0.044   SH3 and cysteine rich domain 2 
STAM2                 0.043   signal transducing adaptor molecule 2 
STAC                  0.043   SH3 and cysteine rich domain 
SH3RF1                0.043   SH3 domain containing ring finger 1 
SH3GL2                0.043   SH3-domain GRB2-like 2 
NOSTRIN               0.041   nitric oxide synthase trafficker isoform 2 
NOSTRIN               0.041   nitric oxide synthase trafficker isoform 1 
ARHGEF7               0.041   PAK-interacting exchange factor beta isoform d [Hom...
ARHGEF7               0.041   PAK-interacting exchange factor beta isoform c [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press