Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NCF2 Sequence: fasta or formatted (526aa) NCBI GI: 67189970
Description:

neutrophil cytosolic factor 2

Referenced in:

Neutrophils, Eosinophils, and Basophils
Superoxide Pathway
Tetratricopeptide Domains

Other entries for this name:
alt mRNA [526aa] neutrophil cytosolic factor 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         37           2
 C cysteine            1.7          9           1
 D aspartate           4.8         25           1
 E glutamate           9.5         50           2
 F phenylalanine       3.8         20           1
 G glycine             4.9         26           1
 H histidine           1.3          7           1
 I isoleucine          3.6         19           2
 K lysine              9.5         50           2
 L leucine             9.3         49           1
 M methionine          2.5         13           1
 N asparagine          3.4         18           2
 P proline             7.0         37           3
 Q glutamine           6.1         32           3
 R arginine            3.6         19           2
 S serine              5.5         29           2
 T threonine           4.0         21           2
 V valine              7.4         39           2
 W tryptophan          1.5          8           1
 Y tyrosine            3.4         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neutrophil cytosolic factor 2 
NCF2                  1.000   neutrophil cytosolic factor 2 
NOXA1                 0.164   NADPH oxidase activator 1 
CD2AP                 0.050   CD2-associated protein 
SH3KBP1               0.039   SH3-domain kinase binding protein 1 isoform b 
SH3KBP1               0.039   SH3-domain kinase binding protein 1 isoform a 
DNMBP                 0.037   dynamin binding protein 
ITSN2                 0.036   intersectin 2 isoform 3 
ITSN2                 0.036   intersectin 2 isoform 1 
ITSN2                 0.036   intersectin 2 isoform 2 
SH3D19                0.035   SH3 domain containing 19 isoform c 
SH3D19                0.035   SH3 domain containing 19 isoform b 
SH3D19                0.035   SH3 domain containing 19 isoform a 
ITSN1                 0.034   intersectin 1 isoform ITSN-s 
ITSN1                 0.034   intersectin 1 isoform ITSN-l 
SH3YL1                0.033   SH3 domain containing, Ysc84-like 1 isoform 2 [Homo...
SORBS3                0.032   sorbin and SH3 domain containing 3 isoform 1 
SORBS3                0.032   sorbin and SH3 domain containing 3 isoform 2 
SORBS2                0.031   sorbin and SH3 domain containing 2 isoform 3 
SORBS2                0.031   sorbin and SH3 domain containing 2 isoform 8 
STAC3                 0.030   SH3 and cysteine rich domain 3 
NCF4                  0.030   neutrophil cytosolic factor 4 isoform 1 
NCF4                  0.030   neutrophil cytosolic factor 4 isoform 2 
C1orf113              0.029   SH3 domain-containing protein C1orf113 isoform 1 [H...
FCHSD2                0.029   FCH and double SH3 domains 2 
SH3YL1                0.029   SH3 domain containing, Ysc84-like 1 isoform 1 [Homo...
SH3RF3                0.028   SH3 domain containing ring finger 3 
SORBS2                0.028   sorbin and SH3 domain containing 2 isoform 7 
SORBS2                0.028   sorbin and SH3 domain containing 2 isoform 2 
SH3RF1                0.028   SH3 domain containing ring finger 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press