Guide to the Human Genome
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Name: STAC Sequence: fasta or formatted (402aa) NCBI GI: 4507247
Description:

SH3 and cysteine rich domain

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         20           1
 C cysteine            2.7         11           1
 D aspartate           5.2         21           2
 E glutamate           6.5         26           3
 F phenylalanine       4.5         18           2
 G glycine             8.0         32           3
 H histidine           2.5         10           2
 I isoleucine          5.0         20           2
 K lysine              8.2         33           3
 L leucine             7.5         30           2
 M methionine          2.2          9           1
 N asparagine          4.2         17           1
 P proline             7.2         29           2
 Q glutamine           5.0         20           2
 R arginine            5.2         21           2
 S serine              9.5         38           3
 T threonine           4.7         19           1
 V valine              4.5         18           1
 W tryptophan          0.5          2           2
 Y tyrosine            2.0          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH3 and cysteine rich domain 
STAC2                 0.354   SH3 and cysteine rich domain 2 
STAC3                 0.261   SH3 and cysteine rich domain 3 
SPTAN1                0.052   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
SPTAN1                0.052   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
CD2AP                 0.044   CD2-associated protein 
STAM                  0.040   signal transducing adaptor molecule 1 
SH3GL2                0.040   SH3-domain GRB2-like 2 
GRB2                  0.039   growth factor receptor-bound protein 2 isoform 1 [Hom...
GRB2                  0.039   growth factor receptor-bound protein 2 isoform 2 [Ho...
SPTA1                 0.037   spectrin, alpha, erythrocytic 1 
SH3D19                0.037   SH3 domain containing 19 isoform c 
SH3D19                0.037   SH3 domain containing 19 isoform b 
SH3D19                0.037   SH3 domain containing 19 isoform a 
SPATA13               0.037   spermatogenesis associated 13 
ARHGEF9               0.036   Cdc42 guanine exchange factor 9 
ARHGEF4               0.036   Rho guanine nucleotide exchange factor 4 isoform a [...
ARHGEF4               0.036   Rho guanine nucleotide exchange factor 4 isoform b [...
SH3KBP1               0.036   SH3-domain kinase binding protein 1 isoform b 
SH3KBP1               0.036   SH3-domain kinase binding protein 1 isoform a 
STAM2                 0.036   signal transducing adaptor molecule 2 
GRAP2                 0.036   GRB2-related adaptor protein 2 
SH3GL1                0.036   SH3-domain GRB2-like 1 
SH3YL1                0.035   SH3 domain containing, Ysc84-like 1 isoform 2 [Homo...
SH3YL1                0.035   SH3 domain containing, Ysc84-like 1 isoform 1 [Homo...
PRKCQ                 0.035   protein kinase C, theta 
PRKCE                 0.034   protein kinase C, epsilon 
ITSN1                 0.034   intersectin 1 isoform ITSN-s 
ITSN1                 0.034   intersectin 1 isoform ITSN-l 
SH3RF3                0.034   SH3 domain containing ring finger 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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