Guide to the Human Genome
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Name: SH3GL1 Sequence: fasta or formatted (368aa) NCBI GI: 4506929
Description:

SH3-domain GRB2-like 1

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         21           2
 C cysteine            1.1          4           1
 D aspartate           6.8         25           3
 E glutamate          10.6         39           2
 F phenylalanine       3.5         13           2
 G glycine             6.5         24           2
 H histidine           1.6          6           2
 I isoleucine          3.5         13           1
 K lysine              9.2         34           3
 L leucine            10.6         39           2
 M methionine          2.4          9           1
 N asparagine          3.0         11           1
 P proline             6.0         22           2
 Q glutamine           5.4         20           1
 R arginine            5.2         19           2
 S serine              7.3         27           3
 T threonine           3.5         13           2
 V valine              5.2         19           1
 W tryptophan          0.3          1           1
 Y tyrosine            2.4          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH3-domain GRB2-like 1 
SH3GL2                0.698   SH3-domain GRB2-like 2 
SH3GL3                0.653   SH3-domain GRB2-like 3 
SH3GLB1               0.142   SH3-containing protein SH3GLB1 
SH3GLB2               0.107   SH3-domain GRB2-like endophilin B2 
SH3RF1                0.076   SH3 domain containing ring finger 1 
SH3RF3                0.072   SH3 domain containing ring finger 3 
RICH2                 0.072   Rho GTPase-activating protein RICH2 
ARHGAP17              0.063   nadrin isoform 1 
ARHGAP17              0.063   nadrin isoform 2 
SORBS2                0.062   sorbin and SH3 domain containing 2 isoform 8 
SORBS2                0.062   sorbin and SH3 domain containing 2 isoform 3 
NOSTRIN               0.062   nitric oxide synthase trafficker isoform 2 
NOSTRIN               0.062   nitric oxide synthase trafficker isoform 1 
SH3RF2                0.062   SH3 domain containing ring finger 2 
SORBS2                0.059   sorbin and SH3 domain containing 2 isoform 7 
SORBS2                0.059   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.059   sorbin and SH3 domain containing 2 isoform 5 
SORBS2                0.059   sorbin and SH3 domain containing 2 isoform 4 
SORBS2                0.059   sorbin and SH3 domain containing 2 isoform 2 
SORBS2                0.059   sorbin and SH3 domain containing 2 isoform 1 
SH3YL1                0.052   SH3 domain containing, Ysc84-like 1 isoform 2 [Homo...
GRB2                  0.052   growth factor receptor-bound protein 2 isoform 1 [Hom...
GRB2                  0.052   growth factor receptor-bound protein 2 isoform 2 [Ho...
SH3KBP1               0.051   SH3-domain kinase binding protein 1 isoform b 
SH3KBP1               0.051   SH3-domain kinase binding protein 1 isoform a 
SH3D19                0.051   SH3 domain containing 19 isoform c 
SH3D19                0.051   SH3 domain containing 19 isoform b 
SH3D19                0.051   SH3 domain containing 19 isoform a 
NCF4                  0.049   neutrophil cytosolic factor 4 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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