Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NOSTRIN Sequence: fasta or formatted (428aa) NCBI GI: 16418431
Description:

nitric oxide synthase trafficker isoform 1

Referenced in:

Urea Cycle, Nitric Oxide, and Polyamines

Other entries for this name:
alt prot [506aa] nitric oxide synthase trafficker isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         28           2
 C cysteine            1.4          6           1
 D aspartate           4.0         17           2
 E glutamate          10.0         43           2
 F phenylalanine       2.3         10           1
 G glycine             3.3         14           2
 H histidine           2.3         10           1
 I isoleucine          4.7         20           2
 K lysine             11.9         51           3
 L leucine            11.4         49           2
 M methionine          2.3         10           1
 N asparagine          5.8         25           2
 P proline             2.8         12           1
 Q glutamine           5.4         23           2
 R arginine            3.7         16           2
 S serine             10.0         43           2
 T threonine           5.4         23           2
 V valine              2.6         11           1
 W tryptophan          1.2          5           2
 Y tyrosine            2.8         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nitric oxide synthase trafficker isoform 1 
NOSTRIN               1.000   nitric oxide synthase trafficker isoform 2 
ITSN2                 0.071   intersectin 2 isoform 3 
ITSN2                 0.062   intersectin 2 isoform 1 
ITSN2                 0.062   intersectin 2 isoform 2 
SH3GL1                0.054   SH3-domain GRB2-like 1 
ITSN1                 0.054   intersectin 1 isoform ITSN-s 
ITSN1                 0.054   intersectin 1 isoform ITSN-l 
CD2AP                 0.049   CD2-associated protein 
SH3GL2                0.049   SH3-domain GRB2-like 2 
SH3KBP1               0.047   SH3-domain kinase binding protein 1 isoform b 
SH3KBP1               0.047   SH3-domain kinase binding protein 1 isoform a 
ARHGEF6               0.045   Rac/Cdc42 guanine nucleotide exchange factor 6 [Homo...
VAV1                  0.043   vav 1 guanine nucleotide exchange factor 
ARHGEF7               0.041   PAK-interacting exchange factor beta isoform a [Hom...
ARHGEF7               0.041   PAK-interacting exchange factor beta isoform d [Hom...
ARHGEF7               0.041   PAK-interacting exchange factor beta isoform c [Hom...
ARHGEF7               0.041   PAK-interacting exchange factor beta isoform b [Homo...
ARHGEF7               0.041   PAK-interacting exchange factor beta isoform a 
SORBS3                0.041   sorbin and SH3 domain containing 3 isoform 1 
SORBS3                0.041   sorbin and SH3 domain containing 3 isoform 2 
KIAA1804              0.041   mixed lineage kinase 4 
MYO1E                 0.041   myosin IE 
C1orf113              0.040   SH3 domain-containing protein C1orf113 isoform 1 [H...
SH3D19                0.040   SH3 domain containing 19 isoform c 
SH3D19                0.040   SH3 domain containing 19 isoform b 
SGSM3                 0.039   small G protein signaling modulator 3 
SPTAN1                0.039   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
SPTAN1                0.039   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
SORBS2                0.038   sorbin and SH3 domain containing 2 isoform 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press