LOC100288658 16280

Name: LOC100288658	Sequence: fasta or formatted (231aa)		NCBI GI: 239508715
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt mRNA {231aa} PREDICTED: hypothetical protein XP_002342750
Composition: Amino acid Percentage Count Longest homopolymer A alanine 17.7 41 5 C cysteine 1.3 3 1 D aspartate 2.6 6 1 E glutamate 4.8 11 2 F phenylalanine 0.9 2 1 G glycine 16.5 38 6 H histidine 2.2 5 1 I isoleucine 0.4 1 1 K lysine 1.3 3 1 L leucine 5.2 12 1 M methionine 1.7 4 1 N asparagine 0.9 2 1 P proline 13.4 31 2 Q glutamine 1.7 4 1 R arginine 15.6 36 4 S serine 6.5 15 2 T threonine 3.0 7 1 V valine 3.0 7 1 W tryptophan 1.3 3 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100288658 1.000 PREDICTED: hypothetical protein XP_002342750 LOC100293776 0.976 PREDICTED: hypothetical protein LOC100291383 0.341 PREDICTED: hypothetical protein XP_002346891 FLJ37078 0.068 hypothetical protein LOC222183 TAF4 0.066 TBP-associated factor 4 BAT2 0.064 HLA-B associated transcript-2 WTIP 0.062 Wilms tumor 1 interacting protein LOC100293268 0.055 PREDICTED: hypothetical protein LOC100133885 0.053 PREDICTED: hypothetical protein LOC339192 0.053 PREDICTED: hypothetical protein C6orf174 0.053 hypothetical protein LOC387104 LOC100290023 0.053 PREDICTED: hypothetical protein XP_002348147 LOC339742 0.051 PREDICTED: hypothetical protein MAGI2 0.048 membrane associated guanylate kinase, WW and PDZ dom... FOXK1 0.048 forkhead box K1 COL3A1 0.048 collagen type III alpha 1 preproprotein COL18A1 0.048 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.048 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.048 alpha 1 type XVIII collagen isoform 1 precursor [Ho... CLIC6 0.048 chloride intracellular channel 6 LOC100293596 0.048 PREDICTED: similar to mucin LOC100289661 0.048 PREDICTED: hypothetical protein LOC100289661 0.048 PREDICTED: hypothetical protein XP_002343723 SCARF2 0.048 scavenger receptor class F, member 2 isoform 1 [Homo... SCARF2 0.048 scavenger receptor class F, member 2 isoform 2 [Homo... COL2A1 0.046 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.046 collagen, type II, alpha 1 isoform 2 precursor [Hom... LOC100127930 0.046 PREDICTED: hypothetical protein LOC284988 0.046 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.