Search of human proteins with 226371627

Search of human proteins with 226371627

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|226371627 transcription factor 7-like 2 isoform 6 [Homo
sapiens]
         (442 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|226371627 transcription factor 7-like 2 isoform 6 [Homo sapiens]   916   0.0  
gi|226371620 transcription factor 7-like 2 isoform 3 [Homo sapiens]   894   0.0  
gi|226371623 transcription factor 7-like 2 isoform 4 [Homo sapiens]   892   0.0  
gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens]   866   0.0  
gi|226371625 transcription factor 7-like 2 isoform 5 [Homo sapiens]   866   0.0  
gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens]   853   0.0  
gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens]         600   e-172
gi|7705917 lymphoid enhancer-binding factor 1 isoform 1 [Homo sa...   452   e-127
gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo ...   416   e-116
gi|195222732 lymphoid enhancer-binding factor 1 isoform 2 [Homo ...   398   e-111
gi|42518080 transcription factor 7 (T-cell specific, HMG-box) is...   304   9e-83
gi|42518078 transcription factor 7 (T-cell specific, HMG-box) is...   250   2e-66
gi|47419938 transcription factor 7 (T-cell specific, HMG-box) is...   250   2e-66
gi|198442851 transcription factor 7 (T-cell specific, HMG-box) 6...   230   2e-60
gi|198442849 transcription factor 7 (T-cell specific, HMG-box) 5...   230   2e-60
gi|42518074 transcription factor 7 (T-cell specific, HMG-box) is...   230   2e-60
gi|42714657 transcription factor 7 (T-cell specific, HMG-box) is...   230   2e-60
gi|112421108 capicua homolog [Homo sapiens]                            75   9e-14
gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo...    71   2e-12
gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Hom...    71   2e-12
gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Hom...    66   7e-11
gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Hom...    66   7e-11
gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo...    66   7e-11
gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo...    66   7e-11
gi|41406089 SRY-box 13 [Homo sapiens]                                  63   5e-10
gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo...    61   2e-09
gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo...    61   2e-09
gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo...    61   2e-09
gi|30179903 SRY (sex determining region Y)-box 8 [Homo sapiens]        60   5e-09
gi|4507161 SRY-box 11 [Homo sapiens]                                   59   7e-09

>gi|226371627 transcription factor 7-like 2 isoform 6 [Homo sapiens]
          Length = 442

 Score =  916 bits (2368), Expect = 0.0
 Identities = 442/442 (100%), Positives = 442/442 (100%)

Query: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
           MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS
Sbjct: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60

Query: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
           DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS
Sbjct: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120

Query: 121 LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL 180
           LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL
Sbjct: 121 LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL 180

Query: 181 ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQ 240
           ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQ
Sbjct: 181 ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQ 240

Query: 241 QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES 300
           QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES
Sbjct: 241 QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES 300

Query: 301 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 360
           SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI
Sbjct: 301 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 360

Query: 361 LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETNGEKK 420
           LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETNGEKK
Sbjct: 361 LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETNGEKK 420

Query: 421 SAFATYKVKAAASAHPLQMEAY 442
           SAFATYKVKAAASAHPLQMEAY
Sbjct: 421 SAFATYKVKAAASAHPLQMEAY 442


>gi|226371620 transcription factor 7-like 2 isoform 3 [Homo sapiens]
          Length = 489

 Score =  894 bits (2310), Expect = 0.0
 Identities = 442/489 (90%), Positives = 442/489 (90%), Gaps = 47/489 (9%)

Query: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
           MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS
Sbjct: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60

Query: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
           DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS
Sbjct: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120

Query: 121 LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIV------------------- 161
           LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIV                   
Sbjct: 121 LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSPLPCCTQGHDCQHFYPPS 180

Query: 162 ----------------------------SNKVPVVQHPHHVHPLTPLITYSNEHFTPGNP 193
                                       SNKVPVVQHPHHVHPLTPLITYSNEHFTPGNP
Sbjct: 181 DFTVSTQVFRDMKRSHSLQKVGEPWCIESNKVPVVQHPHHVHPLTPLITYSNEHFTPGNP 240

Query: 194 PPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGF 253
           PPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGF
Sbjct: 241 PPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGF 300

Query: 254 RHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKH 313
           RHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKH
Sbjct: 301 RHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKH 360

Query: 314 QDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQ 373
           QDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQ
Sbjct: 361 QDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQ 420

Query: 374 AKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETNGEKKSAFATYKVKAAAS 433
           AKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETNGEKKSAFATYKVKAAAS
Sbjct: 421 AKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETNGEKKSAFATYKVKAAAS 480

Query: 434 AHPLQMEAY 442
           AHPLQMEAY
Sbjct: 481 AHPLQMEAY 489


>gi|226371623 transcription factor 7-like 2 isoform 4 [Homo sapiens]
          Length = 455

 Score =  892 bits (2305), Expect = 0.0
 Identities = 438/459 (95%), Positives = 438/459 (95%), Gaps = 21/459 (4%)

Query: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
           MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS
Sbjct: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60

Query: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
           DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS
Sbjct: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120

Query: 121 LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL 180
           LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL
Sbjct: 121 LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL 180

Query: 181 ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQ 240
           ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGW    
Sbjct: 181 ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGW---- 236

Query: 241 QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES 300
           QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES
Sbjct: 237 QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES 296

Query: 301 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 360
           SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI
Sbjct: 297 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 356

Query: 361 LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETN---- 416
           LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETN    
Sbjct: 357 LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETNEHSE 416

Query: 417 -------------GEKKSAFATYKVKAAASAHPLQMEAY 442
                        GEKKSAFATYKVKAAASAHPLQMEAY
Sbjct: 417 CFLNPCLSLPPITGEKKSAFATYKVKAAASAHPLQMEAY 455


>gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens]
          Length = 596

 Score =  866 bits (2238), Expect = 0.0
 Identities = 416/416 (100%), Positives = 416/416 (100%)

Query: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
           MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS
Sbjct: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60

Query: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
           DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS
Sbjct: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120

Query: 121 LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL 180
           LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL
Sbjct: 121 LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL 180

Query: 181 ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQ 240
           ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQ
Sbjct: 181 ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQ 240

Query: 241 QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES 300
           QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES
Sbjct: 241 QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES 300

Query: 301 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 360
           SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI
Sbjct: 301 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 360

Query: 361 LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETN 416
           LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETN
Sbjct: 361 LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETN 416


>gi|226371625 transcription factor 7-like 2 isoform 5 [Homo sapiens]
          Length = 579

 Score =  866 bits (2238), Expect = 0.0
 Identities = 416/416 (100%), Positives = 416/416 (100%)

Query: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
           MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS
Sbjct: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60

Query: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
           DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS
Sbjct: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120

Query: 121 LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL 180
           LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL
Sbjct: 121 LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL 180

Query: 181 ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQ 240
           ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQ
Sbjct: 181 ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQ 240

Query: 241 QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES 300
           QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES
Sbjct: 241 QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES 300

Query: 301 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 360
           SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI
Sbjct: 301 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 360

Query: 361 LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETN 416
           LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETN
Sbjct: 361 LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETN 416


>gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens]
          Length = 602

 Score =  853 bits (2204), Expect = 0.0
 Identities = 416/439 (94%), Positives = 416/439 (94%), Gaps = 23/439 (5%)

Query: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
           MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS
Sbjct: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60

Query: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
           DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS
Sbjct: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120

Query: 121 LSPTART-----------------------YLQMKWPLLDVQAGSLQSRQALKDARSPSP 157
           LSPTART                       YLQMKWPLLDVQAGSLQSRQALKDARSPSP
Sbjct: 121 LSPTARTLHFQSGSTHYSAYKTIEHQIAVQYLQMKWPLLDVQAGSLQSRQALKDARSPSP 180

Query: 158 AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS 217
           AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS
Sbjct: 181 AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS 240

Query: 218 PYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP 277
           PYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP
Sbjct: 241 PYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP 300

Query: 278 HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY 337
           HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY
Sbjct: 301 HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY 360

Query: 338 MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR 397
           MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR
Sbjct: 361 MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR 420

Query: 398 DNYGKKKKRKRDKQPGETN 416
           DNYGKKKKRKRDKQPGETN
Sbjct: 421 DNYGKKKKRKRDKQPGETN 439


>gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens]
          Length = 588

 Score =  600 bits (1548), Expect = e-172
 Identities = 302/422 (71%), Positives = 347/422 (82%), Gaps = 17/422 (4%)

Query: 7   GGGDDLGANDELISFKDEG-EQEEKSSENSSAERDLADVKSSLVNESETNQNSSSDSEAE 65
           GGGDDLGANDELI F+DEG E++E SS+++SA+RDL +VKSSLVNESE NQ+SSSDSEAE
Sbjct: 27  GGGDDLGANDELIPFQDEGGEEQEPSSDSASAQRDLDEVKSSLVNESE-NQSSSSDSEAE 85

Query: 66  RRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGSLSPT- 124
           RRP P  ++F+ K R+   E  + QD   FKGPPYPGYPF+MIPDL+SPYL NG LSP  
Sbjct: 86  RRPQPVRDTFQ-KPRDYFAEVRRPQDSAFFKGPPYPGYPFLMIPDLSSPYLSNGPLSPGG 144

Query: 125 ARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPLITYS 184
           ARTYLQMKWPLLDV + +      +KD RSPSPAH+ SNKVPVVQHPHH+HPLTPLITYS
Sbjct: 145 ARTYLQMKWPLLDVPSSA-----TVKDTRSPSPAHL-SNKVPVVQHPHHMHPLTPLITYS 198

Query: 185 NEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQP 244
           N+HF+PG+PP HL  ++DPKTGIPRPPHP ++SPYYPLSPG VGQIPHPLGWLVPQQGQP
Sbjct: 199 NDHFSPGSPPTHLSPEIDPKTGIPRPPHPSELSPYYPLSPGAVGQIPHPLGWLVPQQGQP 258

Query: 245 VYPITTGGFRHPYPTALTVNASMS-----RFPPHMVPPHHT-LHTTGIPHPAIVTPTVKQ 298
           +Y +  GGFRHPYP AL +NASMS     RF PHMV P H  L T+GIPHPAIV+P VKQ
Sbjct: 259 MYSLPPGGFRHPYP-ALAMNASMSSLVSSRFSPHMVAPAHPGLPTSGIPHPAIVSPIVKQ 317

Query: 299 ESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAIN 358
           E +   +    S K   + K+EE+KKPH+KKPLNAFMLYMKEMRAKVVAECTLKESAAIN
Sbjct: 318 EPAPPSLSPAVSVKSPVTVKKEEEKKPHVKKPLNAFMLYMKEMRAKVVAECTLKESAAIN 377

Query: 359 QILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETNGE 418
           QILGR+WH LSREEQAKYYELARKERQLH QLYP WSARDNYGKKKKRKR+KQ  +T  +
Sbjct: 378 QILGRKWHNLSREEQAKYYELARKERQLHSQLYPTWSARDNYGKKKKRKREKQLSQTQSQ 437

Query: 419 KK 420
           ++
Sbjct: 438 QQ 439


>gi|7705917 lymphoid enhancer-binding factor 1 isoform 1 [Homo
           sapiens]
          Length = 399

 Score =  452 bits (1164), Expect = e-127
 Identities = 252/438 (57%), Positives = 294/438 (67%), Gaps = 52/438 (11%)

Query: 1   MPQLNGGGGD-----DLGANDELISFKDEGE-QEEK---SSENSSAERDLADVKSSLVNE 51
           MPQL+GGGG      +L A DE+I FKDEG+ Q+EK      +   E DLAD+KSSLVNE
Sbjct: 1   MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60

Query: 52  SETNQNSSSDSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLF-KGPPYPGYP-FIMIP 109
           SE    +S+  E  R+     E + DK+RE  ++  K  DGGL+ KGP Y  Y  +IM+P
Sbjct: 61  SEIIP-ASNGHEVARQAQTSQEPYHDKAREHPDDG-KHPDGGLYNKGPSYSSYSGYIMMP 118

Query: 110 DLTS-PYLPNGSLSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVV 168
           ++ + PY+ NGSLSP                                 P    SNKVPVV
Sbjct: 119 NMNNDPYMSNGSLSP---------------------------------PIPRTSNKVPVV 145

Query: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
           Q  H VHPLTPLITYS+EHF+PG+ P H+P+DV+ K G+ R P  PDI  +YPLSPG VG
Sbjct: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205

Query: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
           QI  PLGW    QGQPVYPIT GGFR PYP++L+V+ SMSRF  HM+P     HTTGIPH
Sbjct: 206 QITPPLGW----QGQPVYPIT-GGFRQPYPSSLSVDTSMSRFSHHMIPGPPGPHTTGIPH 260

Query: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
           PAIVTP VKQE   +D   +H     + +KE+E K+PHIKKPLNAFMLYMKEMRA VVAE
Sbjct: 261 PAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAE 320

Query: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR
Sbjct: 321 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 380

Query: 409 DKQPGETNGEKKSAFATY 426
           +K     +G      A Y
Sbjct: 381 EKLQESASGTGPRMTAAY 398


>gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo
           sapiens]
          Length = 386

 Score =  416 bits (1070), Expect = e-116
 Identities = 240/453 (52%), Positives = 281/453 (62%), Gaps = 80/453 (17%)

Query: 1   MPQLNGGGGD-----DLGANDELISFKDEGE-QEEK---SSENSSAERDLADVKSSLVNE 51
           MPQL+GGGG      +L A DE+I FKDEG+ Q+EK      +   E DLAD+KSSLVNE
Sbjct: 1   MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60

Query: 52  SETNQNSSSDSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLF-KGPPYPGYP-FIMIP 109
           SE    +S+  E  R+     E + DK+RE  ++  K  DGGL+ KGP Y  Y  +IM+P
Sbjct: 61  SEIIP-ASNGHEVARQAQTSQEPYHDKAREHPDDG-KHPDGGLYNKGPSYSSYSGYIMMP 118

Query: 110 DLTS-PYLPNGSLSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVV 168
           ++ + PY+ NGSLSP                                 P    SNKVPVV
Sbjct: 119 NMNNDPYMSNGSLSP---------------------------------PIPRTSNKVPVV 145

Query: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
           Q  H VHPLTPLITYS+EHF+PG+ P H+P+DV+ K G+ R P  PDI  +YPLSPG VG
Sbjct: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205

Query: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
           QI  PLGW                                 F  HM+P     HTTGIPH
Sbjct: 206 QITPPLGW---------------------------------FSHHMIPGPPGPHTTGIPH 232

Query: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
           PAIVTP VKQE   +D   +H     + +KE+E K+PHIKKPLNAFMLYMKEMRA VVAE
Sbjct: 233 PAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAE 292

Query: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR
Sbjct: 293 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 352

Query: 409 DKQPGETNGEKKSAFATYKVKAAASAHPLQMEA 441
           +K     +G K+S+F T K KAA     L+MEA
Sbjct: 353 EKLQESASGGKRSSFPTCKAKAATPGPLLEMEA 385


>gi|195222732 lymphoid enhancer-binding factor 1 isoform 2 [Homo
           sapiens]
          Length = 371

 Score =  398 bits (1023), Expect = e-111
 Identities = 230/438 (52%), Positives = 268/438 (61%), Gaps = 80/438 (18%)

Query: 1   MPQLNGGGGD-----DLGANDELISFKDEGE-QEEK---SSENSSAERDLADVKSSLVNE 51
           MPQL+GGGG      +L A DE+I FKDEG+ Q+EK      +   E DLAD+KSSLVNE
Sbjct: 1   MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60

Query: 52  SETNQNSSSDSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLF-KGPPYPGYP-FIMIP 109
           SE    +S+  E  R+     E + DK+RE  ++  K  DGGL+ KGP Y  Y  +IM+P
Sbjct: 61  SEIIP-ASNGHEVARQAQTSQEPYHDKAREHPDDG-KHPDGGLYNKGPSYSSYSGYIMMP 118

Query: 110 DLTS-PYLPNGSLSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVV 168
           ++ + PY+ NGSLSP                                 P    SNKVPVV
Sbjct: 119 NMNNDPYMSNGSLSP---------------------------------PIPRTSNKVPVV 145

Query: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
           Q  H VHPLTPLITYS+EHF+PG+ P H+P+DV+ K G+ R P  PDI  +YPLSPG VG
Sbjct: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205

Query: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
           QI  PLGW                                 F  HM+P     HTTGIPH
Sbjct: 206 QITPPLGW---------------------------------FSHHMIPGPPGPHTTGIPH 232

Query: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
           PAIVTP VKQE   +D   +H     + +KE+E K+PHIKKPLNAFMLYMKEMRA VVAE
Sbjct: 233 PAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAE 292

Query: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR
Sbjct: 293 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 352

Query: 409 DKQPGETNGEKKSAFATY 426
           +K     +G      A Y
Sbjct: 353 EKLQESASGTGPRMTAAY 370


>gi|42518080 transcription factor 7 (T-cell specific, HMG-box)
           isoform 1 [Homo sapiens]
          Length = 384

 Score =  304 bits (779), Expect = 9e-83
 Identities = 203/461 (44%), Positives = 251/461 (54%), Gaps = 102/461 (22%)

Query: 1   MPQLNGGGG-----DDLGANDELISFKDEGEQEEKSSENSSA--ERDLADVKSSLVNESE 53
           MPQL+ GGG     DDLGA DEL++F+DEGE+++  S +S+A  ERDLA++KSSLVNESE
Sbjct: 1   MPQLDSGGGGAGGGDDLGAPDELLAFQDEGEEQDDKSRDSAAGPERDLAELKSSLVNESE 60

Query: 54  -------------TNQNSSSDSEAERRPPPRSESFRDKSRESLEEAAKRQD--GGLFKGP 98
                            +  ++EA  R       F DK  E LE+  K  +   G++K  
Sbjct: 61  GAAGGAGIPGVPGAGAGARGEAEALGREHAAQRLFPDKLPEPLEDGLKAPECTSGMYKET 120

Query: 99  PYPGYPFIMIPDLTSPYLPNGSLSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPA 158
            Y  +  +M       Y P                      +G+ Q  Q       P P 
Sbjct: 121 VYSAFNLLM------HYPP---------------------PSGAGQHPQ-------PQPP 146

Query: 159 HIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISP 218
              +N+ P        H +  L  Y  EHF   +P P  PAD+  K  + RP   PD+S 
Sbjct: 147 LHKANQPP--------HGVPQLSLY--EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSG 194

Query: 219 YYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPH 278
           +Y L+ G++GQ+PH + W                F HP   +L + + +           
Sbjct: 195 FYSLTSGSMGQLPHTVSW----------------FTHP---SLMLGSGVPG--------- 226

Query: 279 HTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYM 338
              H   IPHPAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYM
Sbjct: 227 ---HPAAIPHPAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYM 280

Query: 339 KEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARD 398
           KEMRAKV+AECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARD
Sbjct: 281 KEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARD 340

Query: 399 NYGKKKKRKRDKQPGETNGEKKSAFATYKVKAAASAHPLQM 439
           NYGKKK+R R+K    T G K++AF TY  KAAA A  L M
Sbjct: 341 NYGKKKRRSREKHQESTTGGKRNAFGTYPEKAAAPAPFLPM 381


>gi|42518078 transcription factor 7 (T-cell specific, HMG-box)
           isoform 2 [Homo sapiens]
          Length = 269

 Score =  250 bits (639), Expect = 2e-66
 Identities = 145/271 (53%), Positives = 169/271 (62%), Gaps = 41/271 (15%)

Query: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89

Query: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118

Query: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175

Query: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235

Query: 409 DKQPGETNGEKKSAFATYKVKAAASAHPLQM 439
           +K    T G K++AF TY  KAAA A  L M
Sbjct: 236 EKHQESTTGGKRNAFGTYPEKAAAPAPFLPM 266


>gi|47419938 transcription factor 7 (T-cell specific, HMG-box)
           isoform 2 [Homo sapiens]
          Length = 269

 Score =  250 bits (639), Expect = 2e-66
 Identities = 145/271 (53%), Positives = 169/271 (62%), Gaps = 41/271 (15%)

Query: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89

Query: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118

Query: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175

Query: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235

Query: 409 DKQPGETNGEKKSAFATYKVKAAASAHPLQM 439
           +K    T G K++AF TY  KAAA A  L M
Sbjct: 236 EKHQESTTGGKRNAFGTYPEKAAAPAPFLPM 266


>gi|198442851 transcription factor 7 (T-cell specific, HMG-box) 6
           [Homo sapiens]
          Length = 250

 Score =  230 bits (586), Expect = 2e-60
 Identities = 132/247 (53%), Positives = 154/247 (62%), Gaps = 41/247 (16%)

Query: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89

Query: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118

Query: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175

Query: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235

Query: 409 DKQPGET 415
           +K    T
Sbjct: 236 EKHQEST 242


>gi|198442849 transcription factor 7 (T-cell specific, HMG-box) 5
           [Homo sapiens]
          Length = 366

 Score =  230 bits (586), Expect = 2e-60
 Identities = 132/247 (53%), Positives = 154/247 (62%), Gaps = 41/247 (16%)

Query: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89

Query: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118

Query: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175

Query: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235

Query: 409 DKQPGET 415
           +K    T
Sbjct: 236 EKHQEST 242


>gi|42518074 transcription factor 7 (T-cell specific, HMG-box)
           isoform 3 [Homo sapiens]
          Length = 269

 Score =  230 bits (586), Expect = 2e-60
 Identities = 132/247 (53%), Positives = 154/247 (62%), Gaps = 41/247 (16%)

Query: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89

Query: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118

Query: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175

Query: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235

Query: 409 DKQPGET 415
           +K    T
Sbjct: 236 EKHQEST 242


>gi|42714657 transcription factor 7 (T-cell specific, HMG-box)
           isoform 4 [Homo sapiens]
          Length = 268

 Score =  230 bits (586), Expect = 2e-60
 Identities = 132/247 (53%), Positives = 154/247 (62%), Gaps = 41/247 (16%)

Query: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89

Query: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118

Query: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175

Query: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235

Query: 409 DKQPGET 415
           +K    T
Sbjct: 236 EKHQEST 242


>gi|112421108 capicua homolog [Homo sapiens]
          Length = 1608

 Score = 75.5 bits (184), Expect = 9e-14
 Identities = 65/246 (26%), Positives = 108/246 (43%), Gaps = 30/246 (12%)

Query: 205 TGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVN 264
           TG   P  PP  +   P SPG     PHPLG +   +G P             PT     
Sbjct: 89  TGSADPERPPGAT--CPESPGPGP--PHPLGVVESGKGPP-------------PTT-EEE 130

Query: 265 ASMSRFPPHMVPPHHTLHTTG---IPHPAIVTPTVKQESSQSDVGSL----HSSKHQDSK 317
           AS     P +     + H      I  P I  P    +     + +L     SS  +D +
Sbjct: 131 ASGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPKERDSSSEKDGR 190

Query: 318 KEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYY 377
              +++K HI++P+NAFM++ K  RA V      +++  +++ILG  W+AL  +E+ KY+
Sbjct: 191 SPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYH 250

Query: 378 ELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQP---GETNGEKKSAFATYKVKAAASA 434
           +LA + ++ H + +P W   +    +KK   + +P   G   G K++   +      A+A
Sbjct: 251 DLAFQVKEAHFKAHPDWKWCNK--DRKKSSSEAKPTSLGLAGGHKETRERSMSETGTAAA 308

Query: 435 HPLQME 440
             +  E
Sbjct: 309 PGVSSE 314



 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 34/113 (30%), Positives = 44/113 (38%), Gaps = 9/113 (7%)

Query: 222  LSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFR-HPYPTALTVNASMSRFPPHMV----- 275
            L+PG VG  P P   L P    P  P+ T  +   P PT+    A  S+ PP +V     
Sbjct: 1065 LAPGQVGVSPVPSPQLPPACAAPGGPVITAFYSGSPAPTSSAPLAQPSQAPPSLVYTVAT 1124

Query: 276  ---PPHHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKP 325
               PP  T+   G P PA  TP        +  GS+  S      +    K P
Sbjct: 1125 STTPPAATILPKGPPAPATATPAPTSPFPSATAGSMTYSLVAPKAQRPSPKAP 1177


>gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo
           sapiens]
          Length = 501

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 14/182 (7%)

Query: 237 LVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHM------VPPHHTLHTTGIPHPA 290
           LV    + +   T+G F  P+   L +  ++   PP         PP   +  T +P   
Sbjct: 235 LVHGSAEVILAPTSGAFG-PHQQDLRIPLTLHTVPPGARIQFQGAPPSELIRLTKVPLTP 293

Query: 291 IVT-------PTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRA 343
           + T       P+VK E+    +  L S          + +  H+K+P+NAFM++ +  R 
Sbjct: 294 VPTKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRP 353

Query: 344 KVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKK 403
            +        +A I+  LG  W+ LS E++  YY+ A+K ++ H + +PGW  +   GK+
Sbjct: 354 ALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKR 413

Query: 404 KK 405
           K+
Sbjct: 414 KR 415


>gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Homo
           sapiens]
          Length = 753

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 14/182 (7%)

Query: 237 LVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHM------VPPHHTLHTTGIPHPA 290
           LV    + +   T+G F  P+   L +  ++   PP         PP   +  T +P   
Sbjct: 235 LVHGSAEVILAPTSGAFG-PHQQDLRIPLTLHTVPPGARIQFQGAPPSELIRLTKVPLTP 293

Query: 291 IVT-------PTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRA 343
           + T       P+VK E+    +  L S          + +  H+K+P+NAFM++ +  R 
Sbjct: 294 VPTKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRP 353

Query: 344 KVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKK 403
            +        +A I+  LG  W+ LS E++  YY+ A+K ++ H + +PGW  +   GK+
Sbjct: 354 ALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKR 413

Query: 404 KK 405
           K+
Sbjct: 414 KR 415


>gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Homo
           sapiens]
          Length = 841

 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 6/85 (7%)

Query: 324 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 383
           +PHIK+P+NAFM++ K+ R K++       ++ I++ILG RW ++S +E+  YYE   + 
Sbjct: 631 EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARL 690

Query: 384 RQLHMQLYPGWSARDNYGKKKKRKR 408
            ++H++ YP      NY  K + KR
Sbjct: 691 SKIHLEKYP------NYKYKPRPKR 709


>gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Homo
           sapiens]
          Length = 801

 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 6/85 (7%)

Query: 324 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 383
           +PHIK+P+NAFM++ K+ R K++       ++ I++ILG RW ++S +E+  YYE   + 
Sbjct: 591 EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARL 650

Query: 384 RQLHMQLYPGWSARDNYGKKKKRKR 408
            ++H++ YP      NY  K + KR
Sbjct: 651 SKIHLEKYP------NYKYKPRPKR 669


>gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo
           sapiens]
          Length = 804

 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 6/85 (7%)

Query: 324 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 383
           +PHIK+P+NAFM++ K+ R K++       ++ I++ILG RW ++S +E+  YYE   + 
Sbjct: 594 EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARL 653

Query: 384 RQLHMQLYPGWSARDNYGKKKKRKR 408
            ++H++ YP      NY  K + KR
Sbjct: 654 SKIHLEKYP------NYKYKPRPKR 672


>gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo
           sapiens]
          Length = 808

 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 6/85 (7%)

Query: 324 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 383
           +PHIK+P+NAFM++ K+ R K++       ++ I++ILG RW ++S +E+  YYE   + 
Sbjct: 598 EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARL 657

Query: 384 RQLHMQLYPGWSARDNYGKKKKRKR 408
            ++H++ YP      NY  K + KR
Sbjct: 658 SKIHLEKYP------NYKYKPRPKR 676


>gi|41406089 SRY-box 13 [Homo sapiens]
          Length = 622

 Score = 63.2 bits (152), Expect = 5e-10
 Identities = 67/295 (22%), Positives = 116/295 (39%), Gaps = 61/295 (20%)

Query: 160 IVSNKVPVVQHPHHVHPLTPLITYSNEHFT--PGNPPPHLPADVDPKTGIPRPPHPPDIS 217
           I   +  ++Q  H ++ L   I   N  +   P  PP H P  V P + +  P  P    
Sbjct: 198 IAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPLPVTPDSQLALPIQPIPCK 257

Query: 218 PY-YPLS-----PGTVGQIPHPLGWLVPQQGQPVYPIT-TGGFRHPY------PTALTVN 264
           P  YPL      P  V + P  +    P Q +P  P+  T   + P         +L ++
Sbjct: 258 PVEYPLQLLHSPPAPVVKRPGAMATHHPLQ-EPSQPLNLTAKPKAPELPNTSSSPSLKMS 316

Query: 265 ASMSRFPPHMVPPH---------------------------------HTLHTTGIPHPAI 291
           + + R P H  P                                   H+    G P+   
Sbjct: 317 SCVPRPPSHGGPTRDLQSSPPSLPLGFLGEGDAVTKAIQDARQLLHSHSGALDGSPNTPF 376

Query: 292 VTPTVKQESSQS----DVGSLHS------SKHQDSKKE--EEKKKPHIKKPLNAFMLYMK 339
               +  +SS +    + G +H       S   D  +   E +   HIK+P+NAFM++ K
Sbjct: 377 RKDLISLDSSPAKERLEDGCVHPLEEAMLSCDMDGSRHFPESRNSSHIKRPMNAFMVWAK 436

Query: 340 EMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGW 394
           + R K++       +++I++ILG RW +++ +E+  YYE   +  + H++ YP +
Sbjct: 437 DERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPDY 491


>gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo
           sapiens]
          Length = 377

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 301 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 360
           S    G   S  +++S+     + PHIK+P+NAFM++ K+ R K++       ++ I++I
Sbjct: 145 SDGSAGVSESRIYRESRGRGSNE-PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI 203

Query: 361 LGRRWHALSREEQAKYYELARKERQLHMQLYPGW 394
           LG RW A++  E+  YYE   +  + H++ YP +
Sbjct: 204 LGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDY 237


>gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo
           sapiens]
          Length = 750

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 301 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 360
           S    G   S  +++S+     + PHIK+P+NAFM++ K+ R K++       ++ I++I
Sbjct: 518 SDGSAGVSESRIYRESRGRGSNE-PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI 576

Query: 361 LGRRWHALSREEQAKYYELARKERQLHMQLYPGW 394
           LG RW A++  E+  YYE   +  + H++ YP +
Sbjct: 577 LGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDY 610


>gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo
           sapiens]
          Length = 763

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 301 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 360
           S    G   S  +++S+     + PHIK+P+NAFM++ K+ R K++       ++ I++I
Sbjct: 531 SDGSAGVSESRIYRESRGRGSNE-PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI 589

Query: 361 LGRRWHALSREEQAKYYELARKERQLHMQLYPGW 394
           LG RW A++  E+  YYE   +  + H++ YP +
Sbjct: 590 LGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDY 623


>gi|30179903 SRY (sex determining region Y)-box 8 [Homo sapiens]
          Length = 446

 Score = 59.7 bits (143), Expect = 5e-09
 Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 1/110 (0%)

Query: 322 KKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELAR 381
           K KPH+K+P+NAFM++ +  R K+  +     +A +++ LG+ W  LS  E+  + E A 
Sbjct: 97  KAKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAE 156

Query: 382 KERQLHMQLYPGWSARDNYGKKKKR-KRDKQPGETNGEKKSAFATYKVKA 430
           + R  H + +P +  +    K  K    D   G   G      A YK +A
Sbjct: 157 RLRVQHKKDHPDYKYQPRRRKSAKAGHSDSDSGAELGPHPGGGAVYKAEA 206


>gi|4507161 SRY-box 11 [Homo sapiens]
          Length = 441

 Score = 59.3 bits (142), Expect = 7e-09
 Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 2/97 (2%)

Query: 326 HIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQ 385
           HIK+P+NAFM++ K  R K++ +     +A I++ LG+RW  L   E+  +   A + R 
Sbjct: 48  HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRL 107

Query: 386 LHMQLYPGWSARDNYGKKKKRKRDKQPGETNGEKKSA 422
            HM  YP +  R    KK K     +P  +   +KSA
Sbjct: 108 KHMADYPDYKYRPR--KKPKMDPSAKPSASQSPEKSA 142


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.311    0.130    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,913,843
Number of Sequences: 37866
Number of extensions: 1322059
Number of successful extensions: 8684
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 548
Number of HSP's that attempted gapping in prelim test: 6701
Number of HSP's gapped (non-prelim): 2013
length of query: 442
length of database: 18,247,518
effective HSP length: 105
effective length of query: 337
effective length of database: 14,271,588
effective search space: 4809525156
effective search space used: 4809525156
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.