Guide to the Human Genome
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Name: TTC6 Sequence: fasta or formatted (1614aa) NCBI GI: 239756104
Description:

PREDICTED: tetratricopeptide repeat domain 6

Referenced in:

Tetratricopeptide Domains

Other entries for this name:
alt prot [1614aa] PREDICTED: tetratricopeptide repeat domain 6
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0        146           3
 C cysteine            1.3         21           1
 D aspartate           5.0         80           2
 E glutamate           7.9        128           2
 F phenylalanine       4.0         65           2
 G glycine             4.0         65           2
 H histidine           2.3         37           2
 I isoleucine          5.8         93           2
 K lysine              8.6        139           4
 L leucine             9.5        153           3
 M methionine          2.7         43           2
 N asparagine          3.8         62           2
 P proline             5.3         85           3
 Q glutamine           4.6         74           2
 R arginine            5.5         88           2
 S serine              6.9        111           2
 T threonine           4.3         69           2
 V valine              4.0         64           2
 W tryptophan          0.9         15           1
 Y tyrosine            4.7         76           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: tetratricopeptide repeat domain 6 
TTC6                  0.998   PREDICTED: tetratricopeptide repeat domain 6 
C14orf25              0.998   PREDICTED: chromosome 14 open reading frame 25 [Hom...
OGT                   0.021   O-linked GlcNAc transferase isoform 2 
OGT                   0.021   O-linked GlcNAc transferase isoform 1 
CDC27                 0.018   cell division cycle protein 27 isoform 1 
CDC27                 0.018   cell division cycle protein 27 isoform 2 
TOMM70A               0.016   translocase of outer mitochondrial membrane 70 homol...
TMTC4                 0.014   transmembrane and tetratricopeptide repeat containi...
TMTC4                 0.014   transmembrane and tetratricopeptide repeat containi...
BBS4                  0.014   Bardet-Biedl syndrome 4 
TTC13                 0.014   tetratricopeptide repeat domain 13 isoform a 
TTC28                 0.012   tetratricopeptide repeat domain 28 
DNAJC7                0.012   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
RPAP3                 0.011   RNA polymerase II associated protein 3 isoform 1 [H...
TTC13                 0.011   tetratricopeptide repeat domain 13 isoform b 
TMTC1                 0.011   transmembrane and tetratricopeptide repeat containin...
RPAP3                 0.011   RNA polymerase II associated protein 3 isoform 2 [H...
TMTC3                 0.011   transmembrane and tetratricopeptide repeat containi...
TTC16                 0.009   tetratricopeptide repeat domain 16 
DNAJC7                0.009   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
TMTC2                 0.009   transmembrane and tetratricopeptide repeat containin...
TTC37                 0.009   tetratricopeptide repeat domain 37 
DNAJC3                0.009   DnaJ (Hsp40) homolog, subfamily C, member 3 
STIP1                 0.009   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
SGTB                  0.008   small glutamine-rich tetratricopeptide repeat (TPR)-...
RPAP3                 0.008   RNA polymerase II associated protein 3 isoform 3 [H...
SGTA                  0.007   small glutamine-rich tetratricopeptide 
TTC32                 0.007   tetratricopeptide repeat domain 32 
IFT88                 0.007   intraflagellar transport 88 homolog isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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