SNCA 15201

Name: SNCA	Sequence: fasta or formatted (140aa)		NCBI GI: 225690602
Description: alpha-synuclein isoform NACP140		Referenced in: Mammary Tissues Neurons
Other entries for this name: alt mRNA [140aa] alpha-synuclein isoform NACP140 alt mRNA [140aa] alpha-synuclein isoform NACP140 alt prot [112aa] alpha-synuclein isoform NACP112
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.6 19 3 C cysteine 0.0 0 0 D aspartate 4.3 6 1 E glutamate 12.9 18 2 F phenylalanine 1.4 2 1 G glycine 12.9 18 2 H histidine 0.7 1 1 I isoleucine 1.4 2 1 K lysine 10.7 15 2 L leucine 2.9 4 1 M methionine 2.9 4 1 N asparagine 2.1 3 1 P proline 3.6 5 1 Q glutamine 4.3 6 1 R arginine 0.0 0 0 S serine 2.9 4 1 T threonine 7.1 10 1 V valine 13.6 19 2 W tryptophan 0.0 0 0 Y tyrosine 2.9 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 alpha-synuclein isoform NACP140 SNCA 1.000 alpha-synuclein isoform NACP140 SNCA 1.000 alpha-synuclein isoform NACP140 SNCA 0.704 alpha-synuclein isoform NACP112 SNCB 0.528 beta-synuclein SNCB 0.528 beta-synuclein SNCG 0.392 synuclein, gamma (breast cancer-specific protein 1)... VPS13D 0.028 vacuolar protein sorting 13D isoform 2 VPS13D 0.028 vacuolar protein sorting 13D isoform 1 VPS13C 0.024 vacuolar protein sorting 13C protein isoform 1A [Hom... VPS13C 0.024 vacuolar protein sorting 13C protein isoform 1B [Hom... VPS13C 0.024 vacuolar protein sorting 13C protein isoform 2B [Hom... VPS13C 0.024 vacuolar protein sorting 13C protein isoform 2A [Hom... SUPT16H 0.020 chromatin-specific transcription elongation factor la... M6PRBP1 0.020 mannose 6 phosphate receptor binding protein 1 [Homo... KIAA1881 0.016 plasma membrane associated protein, S3-12 AKR7A3 0.016 aldo-keto reductase family 7, member A3 C12orf23 0.012 hypothetical protein LOC90488 TTN 0.012 titin isoform novex-3 TTN 0.012 titin isoform N2-A TTN 0.012 titin isoform novex-2 TTN 0.012 titin isoform novex-1 TTN 0.012 titin isoform N2-B AKR7A2 0.012 aldo-keto reductase family 7, member A2 YTHDC1 0.012 splicing factor YT521-B isoform 2 YTHDC1 0.012 splicing factor YT521-B isoform 1 SAP30BP 0.008 transcriptional regulator protein APBA2 0.008 amyloid beta A4 precursor protein-binding, family A... APBA2 0.008 amyloid beta A4 precursor protein-binding, family A,... C5orf41 0.008 luman-recruiting factor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.