Guide to the Human Genome
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Name: SAP30BP Sequence: fasta or formatted (308aa) NCBI GI: 9994179
Description:

transcriptional regulator protein

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         28           2
 C cysteine            0.6          2           1
 D aspartate           8.1         25           3
 E glutamate          11.4         35           4
 F phenylalanine       1.9          6           1
 G glycine             5.8         18           2
 H histidine           0.6          2           1
 I isoleucine          5.5         17           2
 K lysine             10.1         31           2
 L leucine             4.2         13           1
 M methionine          1.9          6           1
 N asparagine          2.9          9           1
 P proline             4.9         15           2
 Q glutamine           3.2         10           1
 R arginine            3.6         11           1
 S serine              8.1         25           2
 T threonine           9.4         29           5
 V valine              4.9         15           2
 W tryptophan          0.6          2           1
 Y tyrosine            2.9          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transcriptional regulator protein 
SLC24A1               0.039   solute carrier family 24 (sodium/potassium/calcium ex...
LOC730474             0.038   PREDICTED: hypothetical protein 
LOC730474             0.034   PREDICTED: hypothetical protein, partial 
ANP32B                0.032   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
LOC729792             0.032   PREDICTED: hypothetical protein 
LOC729792             0.032   PREDICTED: hypothetical protein 
LOC729792             0.032   PREDICTED: hypothetical protein 
LOC100294501          0.032   PREDICTED: hypothetical protein 
LOC100294249          0.032   PREDICTED: hypothetical protein XP_002344067 
LOC100294238          0.032   PREDICTED: hypothetical protein 
LOC100294204          0.032   PREDICTED: hypothetical protein 
LOC100294136          0.032   PREDICTED: hypothetical protein 
LOC100294091          0.032   PREDICTED: hypothetical protein 
LOC730401             0.032   PREDICTED: hypothetical protein 
MYT1L                 0.032   myelin transcription factor 1-like 
ESF1                  0.032   ABT1-associated protein 
DHX16                 0.031   DEAH (Asp-Glu-Ala-His) box polypeptide 16 
NCL                   0.029   nucleolin 
MAP1B                 0.027   microtubule-associated protein 1B 
PPM1G                 0.027   protein phosphatase 1G 
PPM1G                 0.027   protein phosphatase 1G 
MYT1                  0.027   myelin transcription factor 1 
YTHDC1                0.027   splicing factor YT521-B isoform 2 
YTHDC1                0.027   splicing factor YT521-B isoform 1 
LOC100294470          0.026   PREDICTED: hypothetical protein, partial 
UBTF                  0.026   upstream binding transcription factor, RNA polymera...
UBTF                  0.026   upstream binding transcription factor, RNA polymera...
UBTF                  0.026   upstream binding transcription factor, RNA polymerase...
RPGR                  0.026   retinitis pigmentosa GTPase regulator isoform C [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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