SUPT16H 33838

Name: SUPT16H	Sequence: fasta or formatted (1047aa)		NCBI GI: 6005757
Description: chromatin-specific transcription elongation factor large subunit		Referenced in: Centromere Proteins RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 63 2 C cysteine 1.0 10 1 D aspartate 5.7 60 2 E glutamate 11.7 123 7 F phenylalanine 4.5 47 2 G glycine 5.4 57 2 H histidine 1.9 20 1 I isoleucine 5.9 62 2 K lysine 10.2 107 3 L leucine 7.0 73 2 M methionine 2.8 29 1 N asparagine 5.4 57 2 P proline 3.2 34 2 Q glutamine 2.9 30 2 R arginine 4.7 49 2 S serine 6.7 70 2 T threonine 4.4 46 2 V valine 6.4 67 2 W tryptophan 0.8 8 1 Y tyrosine 3.3 35 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chromatin-specific transcription elongation factor la... ANP32E 0.018 acidic (leucine-rich) nuclear phosphoprotein 32 fami... ANP32E 0.018 acidic (leucine-rich) nuclear phosphoprotein 32 fam... ANP32E 0.018 acidic (leucine-rich) nuclear phosphoprotein 32 fam... RPGR 0.017 retinitis pigmentosa GTPase regulator isoform C [Hom... PELP1 0.016 proline, glutamic acid and leucine rich protein 1 [... LOC647020 0.015 PREDICTED: similar to acidic (leucine-rich) nuclear... LOC647020 0.015 PREDICTED: similar to acidic (leucine-rich) nuclear... TPR 0.015 nuclear pore complex-associated protein TPR SON 0.014 SON DNA-binding protein isoform F SON 0.014 SON DNA-binding protein isoform B ZRANB2 0.014 zinc finger protein 265 isoform 1 ZRANB2 0.014 zinc finger protein 265 isoform 2 ANP32B 0.014 acidic (leucine-rich) nuclear phosphoprotein 32 famil... YTHDC1 0.014 splicing factor YT521-B isoform 1 SETD1B 0.014 SET domain containing 1B UBTF 0.013 upstream binding transcription factor, RNA polymera... UBTF 0.013 upstream binding transcription factor, RNA polymera... UBTF 0.013 upstream binding transcription factor, RNA polymerase... WDR43 0.013 WD repeat domain 43 YTHDC1 0.013 splicing factor YT521-B isoform 2 DAXX 0.013 death-domain associated protein isoform a DAXX 0.013 death-domain associated protein isoform a DAXX 0.013 death-domain associated protein isoform b CDC2L2 0.013 cell division cycle 2-like 2 isoform 4 CDC2L2 0.013 cell division cycle 2-like 2 isoform 1 TRIM44 0.013 DIPB protein CDC2L1 0.013 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.013 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.013 cell division cycle 2-like 1 (PITSLRE proteins) isof... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.