Guide to the Human Genome
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Name: ANTXR2 Sequence: fasta or formatted (489aa) NCBI GI: 224809466
Description:

anthrax toxin receptor 2 isoform 2

Referenced in:

Cardiovascular System
Additional Genes in Development

Other entries for this name:
alt prot [488aa] anthrax toxin receptor 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         31           2
 C cysteine            2.2         11           2
 D aspartate           3.1         15           1
 E glutamate           8.0         39           5
 F phenylalanine       2.9         14           1
 G glycine             8.6         42           2
 H histidine           0.4          2           1
 I isoleucine          6.7         33           3
 K lysine              6.1         30           2
 L leucine            10.6         52           5
 M methionine          1.4          7           1
 N asparagine          2.5         12           2
 P proline             7.4         36           5
 Q glutamine           3.9         19           2
 R arginine            5.1         25           2
 S serine              8.0         39           2
 T threonine           4.5         22           2
 V valine              7.8         38           2
 W tryptophan          2.2         11           2
 Y tyrosine            2.2         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   anthrax toxin receptor 2 isoform 2 
ANTXR2                0.971   anthrax toxin receptor 2 isoform 1 
ANTXR1                0.528   anthrax toxin receptor 1 isoform 1 precursor 
ANTXR1                0.362   anthrax toxin receptor 1 isoform 2 precursor 
ANTXR1                0.298   anthrax toxin receptor 1 isoform 3 precursor 
COL6A6                0.031   collagen type VI alpha 6 
COL29A1               0.028   collagen, type XXIX, alpha 1 
ITGAX                 0.026   integrin alpha X precursor 
COL22A1               0.023   collagen, type XXII, alpha 1 
COL7A1                0.020   alpha 1 type VII collagen precursor 
ITIH4                 0.016   inter-alpha (globulin) inhibitor H4 
SF1                   0.015   splicing factor 1 isoform 2 
COL12A1               0.015   collagen, type XII, alpha 1 short isoform precursor ...
COL12A1               0.015   collagen, type XII, alpha 1 long isoform precursor [...
COL6A2                0.014   alpha 2 type VI collagen isoform 2C2a' precursor [H...
COL6A2                0.014   alpha 2 type VI collagen isoform 2C2a precursor [Ho...
COL6A2                0.014   alpha 2 type VI collagen isoform 2C2 precursor [Hom...
SF1                   0.013   splicing factor 1 isoform 1 
FCN3                  0.013   ficolin 3 isoform 2 precursor 
FCN3                  0.013   ficolin 3 isoform 1 precursor 
MATN3                 0.013   matrilin 3 precursor 
COL20A1               0.013   collagen, type XX, alpha 1 
SHANK3                0.011   SH3 and multiple ankyrin repeat domains 3 
BAT2                  0.011   HLA-B associated transcript-2 
SETD1B                0.011   SET domain containing 1B 
CLCA4                 0.010   chloride channel accessory 4 
LMTK3                 0.010   lemur tyrosine kinase 3 
MATN1                 0.010   matrilin 1, cartilage matrix protein 
COL6A1                0.010   collagen, type VI, alpha 1 precursor 
ZNF831                0.010   zinc finger protein 831 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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