Guide to the Human Genome
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Name: TYW1B Sequence: fasta or formatted (668aa) NCBI GI: 224282123
Description:

tRNA-yW synthesizing protein 1 homolog B isoform 1

Referenced in:

tRNA Enzymes

Other entries for this name:
alt prot [471aa] tRNA-yW synthesizing protein 1 homolog B isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         41           1
 C cysteine            2.5         17           1
 D aspartate           5.2         35           2
 E glutamate           9.7         65           3
 F phenylalanine       4.5         30           1
 G glycine             5.5         37           2
 H histidine           3.7         25           2
 I isoleucine          4.9         33           2
 K lysine              7.6         51           2
 L leucine             8.4         56           2
 M methionine          2.4         16           1
 N asparagine          3.7         25           2
 P proline             3.3         22           1
 Q glutamine           4.3         29           2
 R arginine            4.8         32           2
 S serine              7.2         48           3
 T threonine           4.2         28           2
 V valine              6.4         43           2
 W tryptophan          3.0         20           2
 Y tyrosine            2.2         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tRNA-yW synthesizing protein 1 homolog B isoform 1 ... 
TYW1                  0.921   radical S-adenosyl methionine and flavodoxin domains...
TYW1B                 0.521   tRNA-yW synthesizing protein 1 homolog B isoform 2 ...
POR                   0.043   cytochrome P450 reductase 
POLR1A                0.015   DNA-directed RNA polymerase I A 
RPGR                  0.014   retinitis pigmentosa GTPase regulator isoform C [Hom...
PELP1                 0.013   proline, glutamic acid and leucine rich protein 1 [...
CDC2L2                0.011   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.011   cell division cycle 2-like 2 isoform 1 
KIF21B                0.011   kinesin family member 21B 
NOS1                  0.010   nitric oxide synthase 1, neuronal 
TCHH                  0.010   trichohyalin 
CDC2L1                0.010   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.010   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.010   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.010   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.010   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.010   cell division cycle 2-like 1 (PITSLRE proteins) isof...
YTHDC1                0.010   splicing factor YT521-B isoform 2 
YTHDC1                0.010   splicing factor YT521-B isoform 1 
LOC647020             0.010   PREDICTED: similar to acidic (leucine-rich) nuclear...
LOC647020             0.010   PREDICTED: similar to acidic (leucine-rich) nuclear...
SLC24A1               0.010   solute carrier family 24 (sodium/potassium/calcium ex...
CENPB                 0.010   centromere protein B 
NCOR2                 0.010   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.010   nuclear receptor co-repressor 2 isoform 1 
ANP32E                0.010   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
ANP32E                0.010   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
ANP32E                0.010   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
LOXHD1                0.009   lipoxygenase homology domains 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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