Guide to the Human Genome
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Name: TYW1B Sequence: fasta or formatted (471aa) NCBI GI: 224282125
Description:

tRNA-yW synthesizing protein 1 homolog B isoform 2

Referenced in:

tRNA Enzymes

Other entries for this name:
alt prot [668aa] tRNA-yW synthesizing protein 1 homolog B isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         29           1
 C cysteine            2.1         10           1
 D aspartate           4.7         22           2
 E glutamate          10.4         49           5
 F phenylalanine       3.6         17           1
 G glycine             4.0         19           2
 H histidine           3.6         17           2
 I isoleucine          6.4         30           2
 K lysine              5.9         28           2
 L leucine             9.8         46           2
 M methionine          2.8         13           1
 N asparagine          3.6         17           2
 P proline             4.5         21           1
 Q glutamine           4.7         22           2
 R arginine            4.5         21           2
 S serine              6.6         31           3
 T threonine           4.2         20           2
 V valine              7.4         35           2
 W tryptophan          3.2         15           3
 Y tyrosine            1.9          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tRNA-yW synthesizing protein 1 homolog B isoform 2 ... 
TYW1B                 0.752   tRNA-yW synthesizing protein 1 homolog B isoform 1 ...
TYW1                  0.686   radical S-adenosyl methionine and flavodoxin domains...
POLR1A                0.013   DNA-directed RNA polymerase I A 
UBXN1                 0.013   UBX domain protein 1 
PELP1                 0.012   proline, glutamic acid and leucine rich protein 1 [...
ANP32A                0.011   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
EIF5B                 0.010   eukaryotic translation initiation factor 5B 
FAM9A                 0.010   family with sequence similarity 9, member A 
FEZ1                  0.008   zygin 1 isoform 1 
CALD1                 0.008   caldesmon 1 isoform 4 
CALD1                 0.008   caldesmon 1 isoform 3 
ANP32E                0.008   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
ANP32E                0.008   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
ANP32E                0.008   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
ANP32B                0.008   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
SUPT16H               0.007   chromatin-specific transcription elongation factor la...
NPM2                  0.007   nucleoplasmin 2 
CLSPN                 0.007   claspin 
UBXN4                 0.007   UBX domain containing 2 
MYST4                 0.007   MYST histone acetyltransferase (monocytic leukemia)...
SSX2IP                0.007   synovial sarcoma, X breakpoint 2 interacting protein...
WDR87                 0.007   NYD-SP11 protein 
DAXX                  0.007   death-domain associated protein isoform a 
DAXX                  0.007   death-domain associated protein isoform a 
DAXX                  0.007   death-domain associated protein isoform b 
TIMELESS              0.007   timeless homolog 
LOC647020             0.007   PREDICTED: similar to acidic (leucine-rich) nuclear...
LOC647020             0.007   PREDICTED: similar to acidic (leucine-rich) nuclear...
LOC728792             0.007   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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