Guide to the Human Genome
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Name: PGAP2 Sequence: fasta or formatted (161aa) NCBI GI: 224177565
Description:

FGF receptor activating protein 1 isoform 3

Referenced in:

GPI Anchoring

Other entries for this name:
alt prot [307aa] FGF receptor activating protein 1 isoform 2
alt prot [315aa] FGF receptor activating protein 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.2         18           2
 C cysteine            3.7          6           1
 D aspartate           1.2          2           1
 E glutamate           3.1          5           1
 F phenylalanine       1.9          3           1
 G glycine             8.7         14           2
 H histidine           9.9         16           2
 I isoleucine          0.6          1           1
 K lysine              1.2          2           1
 L leucine            23.6         38           4
 M methionine          0.6          1           1
 N asparagine          0.0          0           0
 P proline             8.7         14           2
 Q glutamine           6.2         10           1
 R arginine            7.5         12           2
 S serine              5.6          9           1
 T threonine           1.2          2           1
 V valine              5.0          8           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FGF receptor activating protein 1 isoform 3 
LOC100294001          0.033   PREDICTED: hypothetical protein 
LOC100290969          0.033   PREDICTED: hypothetical protein XP_002347122 
LOC100289446          0.033   PREDICTED: hypothetical protein XP_002344250 
LOC100289661          0.023   PREDICTED: hypothetical protein 
LOC100289661          0.023   PREDICTED: hypothetical protein XP_002343723 
LOC100291384          0.016   PREDICTED: hypothetical protein XP_002347156 
LOC100287578          0.016   PREDICTED: hypothetical protein XP_002343004 
MBD6                  0.013   methyl-CpG binding domain protein 6 
LOC100289954          0.010   PREDICTED: hypothetical protein XP_002346410 
DCST2                 0.010   DC-STAMP domain containing 2 
AMAC1L1               0.010   PREDICTED: acyl-malonyl condensing enzyme 1-like 1 ...
ARMC5                 0.010   armadillo repeat containing 5 isoform b 
PTPDC1                0.010   protein tyrosine phosphatase domain containing 1 pro...
PTPDC1                0.010   protein tyrosine phosphatase domain containing 1 pro...
LOC100289775          0.010   PREDICTED: hypothetical protein XP_002348164 
ZC3H12D               0.010   zinc finger CCCH-type containing 12D 
ALKBH6                0.010   alkB, alkylation repair homolog 6 isoform 1 
RLF                   0.010   rearranged L-myc fusion 
FAM75C1               0.007   family with sequence similarity 75, member C1 [Homo...
LOC100290139          0.007   PREDICTED: hypothetical protein XP_002346782 
LOC100130897          0.007   PREDICTED: hypothetical protein 
LOC100288835          0.007   PREDICTED: hypothetical protein XP_002342616 
LOC100130897          0.007   PREDICTED: hypothetical protein 
ALKBH6                0.007   alkB, alkylation repair homolog 6 isoform 2 
ARHGEF5               0.007   rho guanine nucleotide exchange factor 5 
SHISA5                0.007   scotin 
TMEM190               0.007   transmembrane protein 190 
LOC100293107          0.007   PREDICTED: hypothetical protein 
FASTK                 0.007   Fas-activated serine/threonine kinase isoform 1 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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