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Search of human proteins with 224177565
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|224177565 FGF receptor activating protein 1 isoform 3 [Homo
sapiens]
(161 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|224177565 FGF receptor activating protein 1 isoform 3 [Homo s... 332 1e-91
gi|239755210 PREDICTED: hypothetical protein [Homo sapiens] 35 0.028
gi|239749699 PREDICTED: hypothetical protein XP_002347122 [Homo ... 35 0.028
gi|239743965 PREDICTED: hypothetical protein XP_002344250 [Homo ... 35 0.028
gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] 32 0.24
gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo ... 32 0.24
gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo ... 30 0.69
gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo ... 30 0.69
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 29 1.5
gi|239747276 PREDICTED: hypothetical protein XP_002346410 [Homo ... 28 2.6
gi|109240536 DC-STAMP domain containing 2 [Homo sapiens] 28 2.6
gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1 ... 28 3.4
gi|28875784 armadillo repeat containing 5 isoform b [Homo sapiens] 28 3.4
gi|30089952 protein tyrosine phosphatase domain containing 1 pro... 28 3.4
gi|30089950 protein tyrosine phosphatase domain containing 1 pro... 28 3.4
gi|239752226 PREDICTED: hypothetical protein XP_002348164 [Homo ... 28 4.5
gi|148762945 zinc finger CCCH-type containing 12D [Homo sapiens] 28 4.5
gi|38570140 alkB, alkylation repair homolog 6 isoform 1 [Homo sa... 28 4.5
gi|157671949 rearranged L-myc fusion [Homo sapiens] 28 4.5
gi|223468617 family with sequence similarity 75, member C1 [Homo... 27 5.8
gi|239748716 PREDICTED: hypothetical protein XP_002346782 [Homo ... 27 5.8
gi|169164783 PREDICTED: hypothetical protein [Homo sapiens] 27 5.8
gi|239742745 PREDICTED: hypothetical protein XP_002342616 [Homo ... 27 5.8
gi|169163482 PREDICTED: hypothetical protein [Homo sapiens] 27 5.8
gi|109148544 alkB, alkylation repair homolog 6 isoform 2 [Homo s... 27 5.8
gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens] 27 5.8
gi|21703710 scotin [Homo sapiens] 27 7.6
gi|21040263 transmembrane protein 190 [Homo sapiens] 27 7.6
gi|239756892 PREDICTED: hypothetical protein [Homo sapiens] 27 9.9
gi|5729822 Fas-activated serine/threonine kinase isoform 1 [Homo... 27 9.9
>gi|224177565 FGF receptor activating protein 1 isoform 3 [Homo
sapiens]
Length = 161
Score = 332 bits (850), Expect = 1e-91
Identities = 161/161 (100%), Positives = 161/161 (100%)
Query: 1 MVDGTQLRGAQLPALGELSHRRGGAPALRVAFLHRPALGASLLGGLRLLEPLPQLHLPVF 60
MVDGTQLRGAQLPALGELSHRRGGAPALRVAFLHRPALGASLLGGLRLLEPLPQLHLPVF
Sbjct: 1 MVDGTQLRGAQLPALGELSHRRGGAPALRVAFLHRPALGASLLGGLRLLEPLPQLHLPVF 60
Query: 61 LLSPALPPQLRPQCRGEPRVASAHLCLLLRGLHHPRKCFHCVHCLIPRAHAPHLHSLAVD 120
LLSPALPPQLRPQCRGEPRVASAHLCLLLRGLHHPRKCFHCVHCLIPRAHAPHLHSLAVD
Sbjct: 61 LLSPALPPQLRPQCRGEPRVASAHLCLLLRGLHHPRKCFHCVHCLIPRAHAPHLHSLAVD 120
Query: 121 QEAHSKSGGSQVLQLETAALHHQLHLLLLGAGCLLSAQHVL 161
QEAHSKSGGSQVLQLETAALHHQLHLLLLGAGCLLSAQHVL
Sbjct: 121 QEAHSKSGGSQVLQLETAALHHQLHLLLLGAGCLLSAQHVL 161
>gi|239755210 PREDICTED: hypothetical protein [Homo sapiens]
Length = 241
Score = 35.0 bits (79), Expect = 0.028
Identities = 53/160 (33%), Positives = 65/160 (40%), Gaps = 25/160 (15%)
Query: 11 QLPAL-GELSHRRGGAPALRVAFLHRPALGASLLGGLRLLEPLPQLHLPVFLLSPALPPQ 69
QLP L G + G + LH P L L GGL+LL P L LL LP Q
Sbjct: 53 QLPLLKGAKGNGLAGKAPTALPGLHLPCLRPHLDGGLQLLHP----GLEQGLLLLQLPQQ 108
Query: 70 L--RPQCRGEP---RVASAHLCLLLRGLHHPRKCFHCVHCLIPRAHAPHLHS---LAVDQ 121
L P G P RV + HL ++L GLH V+ + PH L + +
Sbjct: 109 LLAGPLLHGVPELQRVLALHLAVVL-GLH--EAVLELVNLQKLQVTVPHERGALLLTLVR 165
Query: 122 EAHSKSGGSQVLQLETAALHHQLHLLLLGAGCLLSAQHVL 161
+AH QV+ L AA L L G LL H L
Sbjct: 166 QAH-----GQVVVLLLAA----LELAAAGLALLLEPLHTL 196
>gi|239749699 PREDICTED: hypothetical protein XP_002347122 [Homo
sapiens]
Length = 241
Score = 35.0 bits (79), Expect = 0.028
Identities = 53/160 (33%), Positives = 65/160 (40%), Gaps = 25/160 (15%)
Query: 11 QLPAL-GELSHRRGGAPALRVAFLHRPALGASLLGGLRLLEPLPQLHLPVFLLSPALPPQ 69
QLP L G + G + LH P L L GGL+LL P L LL LP Q
Sbjct: 53 QLPLLKGAKGNGLAGKAPTALPGLHLPCLRPHLDGGLQLLHP----GLEQGLLLLQLPQQ 108
Query: 70 L--RPQCRGEP---RVASAHLCLLLRGLHHPRKCFHCVHCLIPRAHAPHLHS---LAVDQ 121
L P G P RV + HL ++L GLH V+ + PH L + +
Sbjct: 109 LLAGPLLHGVPELQRVLALHLAVVL-GLH--EAVLELVNLQKLQVTVPHERGALLLTLVR 165
Query: 122 EAHSKSGGSQVLQLETAALHHQLHLLLLGAGCLLSAQHVL 161
+AH QV+ L AA L L G LL H L
Sbjct: 166 QAH-----GQVVVLLLAA----LELAAAGLALLLEPLHTL 196
>gi|239743965 PREDICTED: hypothetical protein XP_002344250 [Homo
sapiens]
Length = 241
Score = 35.0 bits (79), Expect = 0.028
Identities = 53/160 (33%), Positives = 65/160 (40%), Gaps = 25/160 (15%)
Query: 11 QLPAL-GELSHRRGGAPALRVAFLHRPALGASLLGGLRLLEPLPQLHLPVFLLSPALPPQ 69
QLP L G + G + LH P L L GGL+LL P L LL LP Q
Sbjct: 53 QLPLLKGAKGNGLAGKAPTALPGLHLPCLRPHLDGGLQLLHP----GLEQGLLLLQLPQQ 108
Query: 70 L--RPQCRGEP---RVASAHLCLLLRGLHHPRKCFHCVHCLIPRAHAPHLHS---LAVDQ 121
L P G P RV + HL ++L GLH V+ + PH L + +
Sbjct: 109 LLAGPLLHGVPELQRVLALHLAVVL-GLH--EAVLELVNLQKLQVTVPHERGALLLTLVR 165
Query: 122 EAHSKSGGSQVLQLETAALHHQLHLLLLGAGCLLSAQHVL 161
+AH QV+ L AA L L G LL H L
Sbjct: 166 QAH-----GQVVVLLLAA----LELAAAGLALLLEPLHTL 196
>gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]
Length = 650
Score = 32.0 bits (71), Expect = 0.24
Identities = 40/110 (36%), Positives = 47/110 (42%), Gaps = 16/110 (14%)
Query: 3 DGTQLRGAQLPALGEL---SHRRGGAPALRVAFLHRPALGASLLGGL-RLLEPLPQLHLP 58
DG GA+ P G + R P +R FL P +S GG RL PLP L LP
Sbjct: 280 DGVGSHGARAPGEGSAGSGTERVELGPHVRPFFL--PPTSSSFFGGPPRLHVPLPPLLLP 337
Query: 59 VFLLSPALPPQ---LRPQCRGEPRVASAHLCLLLRGLHHP--RKCFHCVH 103
+ LPPQ L E +A A LLL L H + FH VH
Sbjct: 338 LL-----LPPQSTGLEQAAALEVALALADPGLLLAQLAHEQVQLPFHDVH 382
>gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo
sapiens]
Length = 725
Score = 32.0 bits (71), Expect = 0.24
Identities = 40/110 (36%), Positives = 47/110 (42%), Gaps = 16/110 (14%)
Query: 3 DGTQLRGAQLPALGEL---SHRRGGAPALRVAFLHRPALGASLLGGL-RLLEPLPQLHLP 58
DG GA+ P G + R P +R FL P +S GG RL PLP L LP
Sbjct: 280 DGVGSHGARAPGEGSAGSGTERVELGPHVRPFFL--PPTSSSFFGGPPRLHVPLPPLLLP 337
Query: 59 VFLLSPALPPQ---LRPQCRGEPRVASAHLCLLLRGLHHP--RKCFHCVH 103
+ LPPQ L E +A A LLL L H + FH VH
Sbjct: 338 LL-----LPPQSTGLEQAAALEVALALADPGLLLAQLAHEQVQLPFHDVH 382
>gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo
sapiens]
Length = 446
Score = 30.4 bits (67), Expect = 0.69
Identities = 35/105 (33%), Positives = 41/105 (39%), Gaps = 11/105 (10%)
Query: 53 PQLHLPVFLLSPALPPQLRPQCRGEPRVASAHLCLLLRGLHHPRKCFHCVHCLIPRAH-- 110
P P FLL P LPP P+ R L P C L+P AH
Sbjct: 172 PSTAFPSFLLPPGLPPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAA-LLLPEAHDV 230
Query: 111 APHLHSLAVDQEAHSKS-GGSQVLQLETAALHHQLHLLLLGAGCL 154
+ + QEAH G V+QL QLH LL+GAG L
Sbjct: 231 LGQQDLILLLQEAHLVDVVGEAVIQL------LQLH-LLVGAGVL 268
>gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo
sapiens]
Length = 446
Score = 30.4 bits (67), Expect = 0.69
Identities = 35/105 (33%), Positives = 41/105 (39%), Gaps = 11/105 (10%)
Query: 53 PQLHLPVFLLSPALPPQLRPQCRGEPRVASAHLCLLLRGLHHPRKCFHCVHCLIPRAH-- 110
P P FLL P LPP P+ R L P C L+P AH
Sbjct: 172 PSTAFPSFLLPPGLPPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAA-LLLPEAHDV 230
Query: 111 APHLHSLAVDQEAHSKS-GGSQVLQLETAALHHQLHLLLLGAGCL 154
+ + QEAH G V+QL QLH LL+GAG L
Sbjct: 231 LGQQDLILLLQEAHLVDVVGEAVIQL------LQLH-LLVGAGVL 268
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 29.3 bits (64), Expect = 1.5
Identities = 33/89 (37%), Positives = 38/89 (42%), Gaps = 12/89 (13%)
Query: 14 ALGELSHRRGGAPALRVAFLHRPALGASLLGGLRLLEPLP-----QLHLPVFLLSPALPP 68
+LG+ G P L P LGASLLG L L P L P LLS L
Sbjct: 721 SLGKAPSNSGRPPQLL-----SPLLGASLLGDLSSLTSSPGALPSLLQPPGPLLSGQLGL 775
Query: 69 QLRPQCRGEPRV--ASAHLCLLLRGLHHP 95
QL P P + AS+ L LL+ L P
Sbjct: 776 QLLPGGGAPPPLSEASSPLACLLQSLQIP 804
>gi|239747276 PREDICTED: hypothetical protein XP_002346410 [Homo
sapiens]
Length = 169
Score = 28.5 bits (62), Expect = 2.6
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 51 PLPQLHLPVFLLSPALPPQLRPQCRGEPRVASA 83
P+PQL P L P LPP L P C + SA
Sbjct: 116 PVPQLEAPPAPLQPPLPPLLSP-CTAAAAILSA 147
>gi|109240536 DC-STAMP domain containing 2 [Homo sapiens]
Length = 773
Score = 28.5 bits (62), Expect = 2.6
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 50 EPLPQLHLPVFLLS---PALPPQLRPQCRGEPRVAS 82
+PLP+ H PV +L+ P PP+ +G P AS
Sbjct: 718 QPLPEAHQPVSILTSPEPHRPPETSSATKGAPTPAS 753
>gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1
[Homo sapiens]
Length = 338
Score = 28.1 bits (61), Expect = 3.4
Identities = 30/76 (39%), Positives = 32/76 (42%), Gaps = 13/76 (17%)
Query: 23 GGAPALRVAFLHRPALGASLLGGLRLLEPLPQLHLPVFLL-----SPALPPQLRPQCRGE 77
GG PA V L R A AS L L LL HLP+ LL P L P P RG
Sbjct: 47 GGLPAGFVGPLSRMAYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGP---PDIRGR 103
Query: 78 PRVASAHLCLLLRGLH 93
A C LL L+
Sbjct: 104 -----ACFCALLNVLN 114
>gi|28875784 armadillo repeat containing 5 isoform b [Homo sapiens]
Length = 725
Score = 28.1 bits (61), Expect = 3.4
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 53 PQLHLPVFLLSPALPP-QLRPQCRGEPRV 80
P+ HLP L SPA PP L P+ GE V
Sbjct: 646 PEPHLPTHLSSPARPPDNLSPEWGGEQGV 674
>gi|30089952 protein tyrosine phosphatase domain containing 1
protein isoform 1 [Homo sapiens]
Length = 806
Score = 28.1 bits (61), Expect = 3.4
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 93 HHPRKCFHCVHCLIPRAHAPHLHSLAVDQE-----AHSKSGGSQVLQLETAALHH 142
H PR+ HC IP++ P LH A+ + + SK GG + L+ + + H
Sbjct: 474 HKPRQQKLISHCYIPQSPEPDLHKEALVRSTLSFWSQSKFGGLEGLKDNGSPIFH 528
>gi|30089950 protein tyrosine phosphatase domain containing 1
protein isoform 2 [Homo sapiens]
Length = 754
Score = 28.1 bits (61), Expect = 3.4
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 93 HHPRKCFHCVHCLIPRAHAPHLHSLAVDQE-----AHSKSGGSQVLQLETAALHH 142
H PR+ HC IP++ P LH A+ + + SK GG + L+ + + H
Sbjct: 422 HKPRQQKLISHCYIPQSPEPDLHKEALVRSTLSFWSQSKFGGLEGLKDNGSPIFH 476
>gi|239752226 PREDICTED: hypothetical protein XP_002348164 [Homo
sapiens]
Length = 661
Score = 27.7 bits (60), Expect = 4.5
Identities = 30/102 (29%), Positives = 39/102 (38%), Gaps = 12/102 (11%)
Query: 1 MVDGTQLRGAQLPALGELSHRRGGAPALRVAFLHRPALGAS-LLGGLRLLEPLPQLHL-- 57
+V L GA L + G P PA +S LL G + L P++HL
Sbjct: 438 LVSAALLLGAVGSCLRGWESKHWGPPTSGQELPLPPACESSELLCGDKCLSTAPKVHLSV 497
Query: 58 ---PVFLLSPALPPQLRPQCRGEPRVASAHLCLLLRGLHHPR 96
P + SP LP L +PR+ LL G PR
Sbjct: 498 PHVPATVTSPPLPSYLSVLTHTQPRIT------LLPGTGRPR 533
>gi|148762945 zinc finger CCCH-type containing 12D [Homo sapiens]
Length = 321
Score = 27.7 bits (60), Expect = 4.5
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 96 RKCFHCVHCLIPRAHAPHLHSLAVDQEAHSKSGGSQVL 133
+KC + + C PH LAV E +K+G VL
Sbjct: 264 KKCTYGIKCKFYHPERPHHAQLAVADELRAKTGARPVL 301
>gi|38570140 alkB, alkylation repair homolog 6 isoform 1 [Homo
sapiens]
Length = 161
Score = 27.7 bits (60), Expect = 4.5
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Query: 5 TQLRGAQLPALGELSHRRGGAPALRVAFLHR---PALGASLLGGLRLLEPLPQLHLP--- 58
TQL G +L G L H RG P +L R SL GGL L +LP
Sbjct: 79 TQLSGRKLQNWGGLPHPRGMVPERLPPWLQRYVDKVSNLSLFGGLPANHVLVNQYLPGEG 138
Query: 59 VFLLSPALP 67
+ P LP
Sbjct: 139 IMHHQPGLP 147
>gi|157671949 rearranged L-myc fusion [Homo sapiens]
Length = 1914
Score = 27.7 bits (60), Expect = 4.5
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 75 RGEPR-VASAHLCLLLRGLHHPRKCFHCVH 103
RG R VA +LC +L H P FHC+H
Sbjct: 1288 RGSRRTVAKGNLCYILNKYHKP---FHCIH 1314
>gi|223468617 family with sequence similarity 75, member C1 [Homo
sapiens]
Length = 1188
Score = 27.3 bits (59), Expect = 5.8
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Query: 53 PQLHLPVFLLSPALPPQLRPQCRGEPRVASAH 84
PQL LP +SP PPQ RP+ P +S H
Sbjct: 1158 PQLLLPKKAVSPVSPPQHRPK---TPSASSHH 1186
>gi|239748716 PREDICTED: hypothetical protein XP_002346782 [Homo
sapiens]
Length = 267
Score = 27.3 bits (59), Expect = 5.8
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
Query: 22 RGGAPALRVAFLHRPALGASLLGG-----LRLLEPLPQLHLPVFLLSPALPPQLRPQCRG 76
RGG PA R + P G + GG LL+P +F A+ Q+RPQ R
Sbjct: 147 RGGVPARRRETANPPGPGRARPGGSPFGHRPLLQP-----RQIFAPLQAITNQVRPQQRP 201
Query: 77 EPRVASA 83
EP A +
Sbjct: 202 EPPPAGS 208
>gi|169164783 PREDICTED: hypothetical protein [Homo sapiens]
Length = 396
Score = 27.3 bits (59), Expect = 5.8
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 4 GTQLRGAQLPALGELS-------HRRGGAPALRVAFLHRPALGASLLGG 45
G Q R ALG L+ H RGG A+ A HR LGA++L G
Sbjct: 149 GRQRRALGGQALGLLAQVGIGAGHARGGRGAVGPAGQHRARLGAAVLRG 197
>gi|239742745 PREDICTED: hypothetical protein XP_002342616 [Homo
sapiens]
Length = 248
Score = 27.3 bits (59), Expect = 5.8
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
Query: 22 RGGAPALRVAFLHRPALGASLLGG-----LRLLEPLPQLHLPVFLLSPALPPQLRPQCRG 76
RGG PA R + P G + GG LL+P +F A+ Q+RPQ R
Sbjct: 128 RGGVPARRRETANPPGPGRARPGGSPFGHRPLLQP-----RQIFAPLQAITNQVRPQQRP 182
Query: 77 EPRVASA 83
EP A +
Sbjct: 183 EPPPAGS 189
>gi|169163482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 396
Score = 27.3 bits (59), Expect = 5.8
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 4 GTQLRGAQLPALGELS-------HRRGGAPALRVAFLHRPALGASLLGG 45
G Q R ALG L+ H RGG A+ A HR LGA++L G
Sbjct: 149 GRQRRALGGQALGLLAQVGIGAGHARGGRGAVGPAGQHRARLGAAVLRG 197
>gi|109148544 alkB, alkylation repair homolog 6 isoform 2 [Homo
sapiens]
Length = 266
Score = 27.3 bits (59), Expect = 5.8
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 5 TQLRGAQLPALGELSHRRGGAPALRVAFLHR---PALGASLLGGLRLLEPLPQLHLP 58
TQL G +L G L H RG P +L R SL GGL L +LP
Sbjct: 79 TQLSGRKLQNWGGLPHPRGMVPERLPPWLQRYVDKVSNLSLFGGLPANHVLVNQYLP 135
>gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens]
Length = 1597
Score = 27.3 bits (59), Expect = 5.8
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 34 HRPALGASLLGGLRLLEPLPQLHLPVFLLSPALPPQLRPQCRGEPR 79
H P + A G R+ PLP L + + P PP L P+ RG R
Sbjct: 823 HLPPISAP--GSSRIYRPLPPLPI---IDPPTEPPPLPPKSRGRSR 863
>gi|21703710 scotin [Homo sapiens]
Length = 240
Score = 26.9 bits (58), Expect = 7.6
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 13/57 (22%)
Query: 51 PLPQLHLPVFLLSPALPPQLRPQCRGEPRVASAHLCLLLRGLH-HPRKC--FHCVHC 104
P P++ LP+ LL PP P RGE +C+ RGL P C F C C
Sbjct: 6 PAPRILLPLLLLLLLTPP---PGARGE-------VCMASRGLSLFPESCPDFCCGTC 52
>gi|21040263 transmembrane protein 190 [Homo sapiens]
Length = 177
Score = 26.9 bits (58), Expect = 7.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 71 RPQCRGEPRVASAHLCLLLRGLHHPRKCFH 100
R C G+ + S +LCL LR + C+H
Sbjct: 40 RESCGGQAAIDSPNLCLRLRCCYRNGVCYH 69
>gi|239756892 PREDICTED: hypothetical protein [Homo sapiens]
Length = 576
Score = 26.6 bits (57), Expect = 9.9
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 15/65 (23%)
Query: 25 APALRVAFLHRPALGASLLGGLRLLEP--LPQLHLPVFLLSPALPPQLRPQCRGEPRVAS 82
+PA R+AF LL G+ + LP LP ++ SP PP P G P
Sbjct: 476 SPAYRMAF--------RLLSGMLFSQDALLPGCRLPTYISSPNQPPHSHPD-MGIP---- 522
Query: 83 AHLCL 87
AHL L
Sbjct: 523 AHLAL 527
>gi|5729822 Fas-activated serine/threonine kinase isoform 1 [Homo
sapiens]
Length = 549
Score = 26.6 bits (57), Expect = 9.9
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
Query: 62 LSPALPPQLRPQCRGEPRVASAHLCLLLRGLHHPRKCFHCVHCLI---PRAHAPHLHSLA 118
L P PP L+P RG + +A C R L +PR+ H + L P PH+ L
Sbjct: 188 LPPKPPPPLQPLLRGGQGLEAALSC--PRFLRYPRQ--HLISSLAEARPEELTPHVMVLL 243
Query: 119 VDQEAHSKSGGSQVLQ 134
A + Q+L+
Sbjct: 244 AQHLARHRLREPQLLE 259
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.141 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,413,434
Number of Sequences: 37866
Number of extensions: 391017
Number of successful extensions: 1384
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1375
Number of HSP's gapped (non-prelim): 38
length of query: 161
length of database: 18,247,518
effective HSP length: 94
effective length of query: 67
effective length of database: 14,688,114
effective search space: 984103638
effective search space used: 984103638
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.