BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|224177565 FGF receptor activating protein 1 isoform 3 [Homo sapiens] (161 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|224177565 FGF receptor activating protein 1 isoform 3 [Homo s... 332 1e-91 gi|239755210 PREDICTED: hypothetical protein [Homo sapiens] 35 0.028 gi|239749699 PREDICTED: hypothetical protein XP_002347122 [Homo ... 35 0.028 gi|239743965 PREDICTED: hypothetical protein XP_002344250 [Homo ... 35 0.028 gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] 32 0.24 gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo ... 32 0.24 gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo ... 30 0.69 gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo ... 30 0.69 gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 29 1.5 gi|239747276 PREDICTED: hypothetical protein XP_002346410 [Homo ... 28 2.6 gi|109240536 DC-STAMP domain containing 2 [Homo sapiens] 28 2.6 gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1 ... 28 3.4 gi|28875784 armadillo repeat containing 5 isoform b [Homo sapiens] 28 3.4 gi|30089952 protein tyrosine phosphatase domain containing 1 pro... 28 3.4 gi|30089950 protein tyrosine phosphatase domain containing 1 pro... 28 3.4 gi|239752226 PREDICTED: hypothetical protein XP_002348164 [Homo ... 28 4.5 gi|148762945 zinc finger CCCH-type containing 12D [Homo sapiens] 28 4.5 gi|38570140 alkB, alkylation repair homolog 6 isoform 1 [Homo sa... 28 4.5 gi|157671949 rearranged L-myc fusion [Homo sapiens] 28 4.5 gi|223468617 family with sequence similarity 75, member C1 [Homo... 27 5.8 gi|239748716 PREDICTED: hypothetical protein XP_002346782 [Homo ... 27 5.8 gi|169164783 PREDICTED: hypothetical protein [Homo sapiens] 27 5.8 gi|239742745 PREDICTED: hypothetical protein XP_002342616 [Homo ... 27 5.8 gi|169163482 PREDICTED: hypothetical protein [Homo sapiens] 27 5.8 gi|109148544 alkB, alkylation repair homolog 6 isoform 2 [Homo s... 27 5.8 gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens] 27 5.8 gi|21703710 scotin [Homo sapiens] 27 7.6 gi|21040263 transmembrane protein 190 [Homo sapiens] 27 7.6 gi|239756892 PREDICTED: hypothetical protein [Homo sapiens] 27 9.9 gi|5729822 Fas-activated serine/threonine kinase isoform 1 [Homo... 27 9.9 >gi|224177565 FGF receptor activating protein 1 isoform 3 [Homo sapiens] Length = 161 Score = 332 bits (850), Expect = 1e-91 Identities = 161/161 (100%), Positives = 161/161 (100%) Query: 1 MVDGTQLRGAQLPALGELSHRRGGAPALRVAFLHRPALGASLLGGLRLLEPLPQLHLPVF 60 MVDGTQLRGAQLPALGELSHRRGGAPALRVAFLHRPALGASLLGGLRLLEPLPQLHLPVF Sbjct: 1 MVDGTQLRGAQLPALGELSHRRGGAPALRVAFLHRPALGASLLGGLRLLEPLPQLHLPVF 60 Query: 61 LLSPALPPQLRPQCRGEPRVASAHLCLLLRGLHHPRKCFHCVHCLIPRAHAPHLHSLAVD 120 LLSPALPPQLRPQCRGEPRVASAHLCLLLRGLHHPRKCFHCVHCLIPRAHAPHLHSLAVD Sbjct: 61 LLSPALPPQLRPQCRGEPRVASAHLCLLLRGLHHPRKCFHCVHCLIPRAHAPHLHSLAVD 120 Query: 121 QEAHSKSGGSQVLQLETAALHHQLHLLLLGAGCLLSAQHVL 161 QEAHSKSGGSQVLQLETAALHHQLHLLLLGAGCLLSAQHVL Sbjct: 121 QEAHSKSGGSQVLQLETAALHHQLHLLLLGAGCLLSAQHVL 161 >gi|239755210 PREDICTED: hypothetical protein [Homo sapiens] Length = 241 Score = 35.0 bits (79), Expect = 0.028 Identities = 53/160 (33%), Positives = 65/160 (40%), Gaps = 25/160 (15%) Query: 11 QLPAL-GELSHRRGGAPALRVAFLHRPALGASLLGGLRLLEPLPQLHLPVFLLSPALPPQ 69 QLP L G + G + LH P L L GGL+LL P L LL LP Q Sbjct: 53 QLPLLKGAKGNGLAGKAPTALPGLHLPCLRPHLDGGLQLLHP----GLEQGLLLLQLPQQ 108 Query: 70 L--RPQCRGEP---RVASAHLCLLLRGLHHPRKCFHCVHCLIPRAHAPHLHS---LAVDQ 121 L P G P RV + HL ++L GLH V+ + PH L + + Sbjct: 109 LLAGPLLHGVPELQRVLALHLAVVL-GLH--EAVLELVNLQKLQVTVPHERGALLLTLVR 165 Query: 122 EAHSKSGGSQVLQLETAALHHQLHLLLLGAGCLLSAQHVL 161 +AH QV+ L AA L L G LL H L Sbjct: 166 QAH-----GQVVVLLLAA----LELAAAGLALLLEPLHTL 196 >gi|239749699 PREDICTED: hypothetical protein XP_002347122 [Homo sapiens] Length = 241 Score = 35.0 bits (79), Expect = 0.028 Identities = 53/160 (33%), Positives = 65/160 (40%), Gaps = 25/160 (15%) Query: 11 QLPAL-GELSHRRGGAPALRVAFLHRPALGASLLGGLRLLEPLPQLHLPVFLLSPALPPQ 69 QLP L G + G + LH P L L GGL+LL P L LL LP Q Sbjct: 53 QLPLLKGAKGNGLAGKAPTALPGLHLPCLRPHLDGGLQLLHP----GLEQGLLLLQLPQQ 108 Query: 70 L--RPQCRGEP---RVASAHLCLLLRGLHHPRKCFHCVHCLIPRAHAPHLHS---LAVDQ 121 L P G P RV + HL ++L GLH V+ + PH L + + Sbjct: 109 LLAGPLLHGVPELQRVLALHLAVVL-GLH--EAVLELVNLQKLQVTVPHERGALLLTLVR 165 Query: 122 EAHSKSGGSQVLQLETAALHHQLHLLLLGAGCLLSAQHVL 161 +AH QV+ L AA L L G LL H L Sbjct: 166 QAH-----GQVVVLLLAA----LELAAAGLALLLEPLHTL 196 >gi|239743965 PREDICTED: hypothetical protein XP_002344250 [Homo sapiens] Length = 241 Score = 35.0 bits (79), Expect = 0.028 Identities = 53/160 (33%), Positives = 65/160 (40%), Gaps = 25/160 (15%) Query: 11 QLPAL-GELSHRRGGAPALRVAFLHRPALGASLLGGLRLLEPLPQLHLPVFLLSPALPPQ 69 QLP L G + G + LH P L L GGL+LL P L LL LP Q Sbjct: 53 QLPLLKGAKGNGLAGKAPTALPGLHLPCLRPHLDGGLQLLHP----GLEQGLLLLQLPQQ 108 Query: 70 L--RPQCRGEP---RVASAHLCLLLRGLHHPRKCFHCVHCLIPRAHAPHLHS---LAVDQ 121 L P G P RV + HL ++L GLH V+ + PH L + + Sbjct: 109 LLAGPLLHGVPELQRVLALHLAVVL-GLH--EAVLELVNLQKLQVTVPHERGALLLTLVR 165 Query: 122 EAHSKSGGSQVLQLETAALHHQLHLLLLGAGCLLSAQHVL 161 +AH QV+ L AA L L G LL H L Sbjct: 166 QAH-----GQVVVLLLAA----LELAAAGLALLLEPLHTL 196 >gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] Length = 650 Score = 32.0 bits (71), Expect = 0.24 Identities = 40/110 (36%), Positives = 47/110 (42%), Gaps = 16/110 (14%) Query: 3 DGTQLRGAQLPALGEL---SHRRGGAPALRVAFLHRPALGASLLGGL-RLLEPLPQLHLP 58 DG GA+ P G + R P +R FL P +S GG RL PLP L LP Sbjct: 280 DGVGSHGARAPGEGSAGSGTERVELGPHVRPFFL--PPTSSSFFGGPPRLHVPLPPLLLP 337 Query: 59 VFLLSPALPPQ---LRPQCRGEPRVASAHLCLLLRGLHHP--RKCFHCVH 103 + LPPQ L E +A A LLL L H + FH VH Sbjct: 338 LL-----LPPQSTGLEQAAALEVALALADPGLLLAQLAHEQVQLPFHDVH 382 >gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo sapiens] Length = 725 Score = 32.0 bits (71), Expect = 0.24 Identities = 40/110 (36%), Positives = 47/110 (42%), Gaps = 16/110 (14%) Query: 3 DGTQLRGAQLPALGEL---SHRRGGAPALRVAFLHRPALGASLLGGL-RLLEPLPQLHLP 58 DG GA+ P G + R P +R FL P +S GG RL PLP L LP Sbjct: 280 DGVGSHGARAPGEGSAGSGTERVELGPHVRPFFL--PPTSSSFFGGPPRLHVPLPPLLLP 337 Query: 59 VFLLSPALPPQ---LRPQCRGEPRVASAHLCLLLRGLHHP--RKCFHCVH 103 + LPPQ L E +A A LLL L H + FH VH Sbjct: 338 LL-----LPPQSTGLEQAAALEVALALADPGLLLAQLAHEQVQLPFHDVH 382 >gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo sapiens] Length = 446 Score = 30.4 bits (67), Expect = 0.69 Identities = 35/105 (33%), Positives = 41/105 (39%), Gaps = 11/105 (10%) Query: 53 PQLHLPVFLLSPALPPQLRPQCRGEPRVASAHLCLLLRGLHHPRKCFHCVHCLIPRAH-- 110 P P FLL P LPP P+ R L P C L+P AH Sbjct: 172 PSTAFPSFLLPPGLPPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAA-LLLPEAHDV 230 Query: 111 APHLHSLAVDQEAHSKS-GGSQVLQLETAALHHQLHLLLLGAGCL 154 + + QEAH G V+QL QLH LL+GAG L Sbjct: 231 LGQQDLILLLQEAHLVDVVGEAVIQL------LQLH-LLVGAGVL 268 >gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo sapiens] Length = 446 Score = 30.4 bits (67), Expect = 0.69 Identities = 35/105 (33%), Positives = 41/105 (39%), Gaps = 11/105 (10%) Query: 53 PQLHLPVFLLSPALPPQLRPQCRGEPRVASAHLCLLLRGLHHPRKCFHCVHCLIPRAH-- 110 P P FLL P LPP P+ R L P C L+P AH Sbjct: 172 PSTAFPSFLLPPGLPPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAA-LLLPEAHDV 230 Query: 111 APHLHSLAVDQEAHSKS-GGSQVLQLETAALHHQLHLLLLGAGCL 154 + + QEAH G V+QL QLH LL+GAG L Sbjct: 231 LGQQDLILLLQEAHLVDVVGEAVIQL------LQLH-LLVGAGVL 268 >gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] Length = 1003 Score = 29.3 bits (64), Expect = 1.5 Identities = 33/89 (37%), Positives = 38/89 (42%), Gaps = 12/89 (13%) Query: 14 ALGELSHRRGGAPALRVAFLHRPALGASLLGGLRLLEPLP-----QLHLPVFLLSPALPP 68 +LG+ G P L P LGASLLG L L P L P LLS L Sbjct: 721 SLGKAPSNSGRPPQLL-----SPLLGASLLGDLSSLTSSPGALPSLLQPPGPLLSGQLGL 775 Query: 69 QLRPQCRGEPRV--ASAHLCLLLRGLHHP 95 QL P P + AS+ L LL+ L P Sbjct: 776 QLLPGGGAPPPLSEASSPLACLLQSLQIP 804 >gi|239747276 PREDICTED: hypothetical protein XP_002346410 [Homo sapiens] Length = 169 Score = 28.5 bits (62), Expect = 2.6 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Query: 51 PLPQLHLPVFLLSPALPPQLRPQCRGEPRVASA 83 P+PQL P L P LPP L P C + SA Sbjct: 116 PVPQLEAPPAPLQPPLPPLLSP-CTAAAAILSA 147 >gi|109240536 DC-STAMP domain containing 2 [Homo sapiens] Length = 773 Score = 28.5 bits (62), Expect = 2.6 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%) Query: 50 EPLPQLHLPVFLLS---PALPPQLRPQCRGEPRVAS 82 +PLP+ H PV +L+ P PP+ +G P AS Sbjct: 718 QPLPEAHQPVSILTSPEPHRPPETSSATKGAPTPAS 753 >gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1 [Homo sapiens] Length = 338 Score = 28.1 bits (61), Expect = 3.4 Identities = 30/76 (39%), Positives = 32/76 (42%), Gaps = 13/76 (17%) Query: 23 GGAPALRVAFLHRPALGASLLGGLRLLEPLPQLHLPVFLL-----SPALPPQLRPQCRGE 77 GG PA V L R A AS L L LL HLP+ LL P L P P RG Sbjct: 47 GGLPAGFVGPLSRMAYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGP---PDIRGR 103 Query: 78 PRVASAHLCLLLRGLH 93 A C LL L+ Sbjct: 104 -----ACFCALLNVLN 114 >gi|28875784 armadillo repeat containing 5 isoform b [Homo sapiens] Length = 725 Score = 28.1 bits (61), Expect = 3.4 Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Query: 53 PQLHLPVFLLSPALPP-QLRPQCRGEPRV 80 P+ HLP L SPA PP L P+ GE V Sbjct: 646 PEPHLPTHLSSPARPPDNLSPEWGGEQGV 674 >gi|30089952 protein tyrosine phosphatase domain containing 1 protein isoform 1 [Homo sapiens] Length = 806 Score = 28.1 bits (61), Expect = 3.4 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Query: 93 HHPRKCFHCVHCLIPRAHAPHLHSLAVDQE-----AHSKSGGSQVLQLETAALHH 142 H PR+ HC IP++ P LH A+ + + SK GG + L+ + + H Sbjct: 474 HKPRQQKLISHCYIPQSPEPDLHKEALVRSTLSFWSQSKFGGLEGLKDNGSPIFH 528 >gi|30089950 protein tyrosine phosphatase domain containing 1 protein isoform 2 [Homo sapiens] Length = 754 Score = 28.1 bits (61), Expect = 3.4 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Query: 93 HHPRKCFHCVHCLIPRAHAPHLHSLAVDQE-----AHSKSGGSQVLQLETAALHH 142 H PR+ HC IP++ P LH A+ + + SK GG + L+ + + H Sbjct: 422 HKPRQQKLISHCYIPQSPEPDLHKEALVRSTLSFWSQSKFGGLEGLKDNGSPIFH 476 >gi|239752226 PREDICTED: hypothetical protein XP_002348164 [Homo sapiens] Length = 661 Score = 27.7 bits (60), Expect = 4.5 Identities = 30/102 (29%), Positives = 39/102 (38%), Gaps = 12/102 (11%) Query: 1 MVDGTQLRGAQLPALGELSHRRGGAPALRVAFLHRPALGAS-LLGGLRLLEPLPQLHL-- 57 +V L GA L + G P PA +S LL G + L P++HL Sbjct: 438 LVSAALLLGAVGSCLRGWESKHWGPPTSGQELPLPPACESSELLCGDKCLSTAPKVHLSV 497 Query: 58 ---PVFLLSPALPPQLRPQCRGEPRVASAHLCLLLRGLHHPR 96 P + SP LP L +PR+ LL G PR Sbjct: 498 PHVPATVTSPPLPSYLSVLTHTQPRIT------LLPGTGRPR 533 >gi|148762945 zinc finger CCCH-type containing 12D [Homo sapiens] Length = 321 Score = 27.7 bits (60), Expect = 4.5 Identities = 13/38 (34%), Positives = 18/38 (47%) Query: 96 RKCFHCVHCLIPRAHAPHLHSLAVDQEAHSKSGGSQVL 133 +KC + + C PH LAV E +K+G VL Sbjct: 264 KKCTYGIKCKFYHPERPHHAQLAVADELRAKTGARPVL 301 >gi|38570140 alkB, alkylation repair homolog 6 isoform 1 [Homo sapiens] Length = 161 Score = 27.7 bits (60), Expect = 4.5 Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 6/69 (8%) Query: 5 TQLRGAQLPALGELSHRRGGAPALRVAFLHR---PALGASLLGGLRLLEPLPQLHLP--- 58 TQL G +L G L H RG P +L R SL GGL L +LP Sbjct: 79 TQLSGRKLQNWGGLPHPRGMVPERLPPWLQRYVDKVSNLSLFGGLPANHVLVNQYLPGEG 138 Query: 59 VFLLSPALP 67 + P LP Sbjct: 139 IMHHQPGLP 147 >gi|157671949 rearranged L-myc fusion [Homo sapiens] Length = 1914 Score = 27.7 bits (60), Expect = 4.5 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%) Query: 75 RGEPR-VASAHLCLLLRGLHHPRKCFHCVH 103 RG R VA +LC +L H P FHC+H Sbjct: 1288 RGSRRTVAKGNLCYILNKYHKP---FHCIH 1314 >gi|223468617 family with sequence similarity 75, member C1 [Homo sapiens] Length = 1188 Score = 27.3 bits (59), Expect = 5.8 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 3/32 (9%) Query: 53 PQLHLPVFLLSPALPPQLRPQCRGEPRVASAH 84 PQL LP +SP PPQ RP+ P +S H Sbjct: 1158 PQLLLPKKAVSPVSPPQHRPK---TPSASSHH 1186 >gi|239748716 PREDICTED: hypothetical protein XP_002346782 [Homo sapiens] Length = 267 Score = 27.3 bits (59), Expect = 5.8 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 10/67 (14%) Query: 22 RGGAPALRVAFLHRPALGASLLGG-----LRLLEPLPQLHLPVFLLSPALPPQLRPQCRG 76 RGG PA R + P G + GG LL+P +F A+ Q+RPQ R Sbjct: 147 RGGVPARRRETANPPGPGRARPGGSPFGHRPLLQP-----RQIFAPLQAITNQVRPQQRP 201 Query: 77 EPRVASA 83 EP A + Sbjct: 202 EPPPAGS 208 >gi|169164783 PREDICTED: hypothetical protein [Homo sapiens] Length = 396 Score = 27.3 bits (59), Expect = 5.8 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 7/49 (14%) Query: 4 GTQLRGAQLPALGELS-------HRRGGAPALRVAFLHRPALGASLLGG 45 G Q R ALG L+ H RGG A+ A HR LGA++L G Sbjct: 149 GRQRRALGGQALGLLAQVGIGAGHARGGRGAVGPAGQHRARLGAAVLRG 197 >gi|239742745 PREDICTED: hypothetical protein XP_002342616 [Homo sapiens] Length = 248 Score = 27.3 bits (59), Expect = 5.8 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 10/67 (14%) Query: 22 RGGAPALRVAFLHRPALGASLLGG-----LRLLEPLPQLHLPVFLLSPALPPQLRPQCRG 76 RGG PA R + P G + GG LL+P +F A+ Q+RPQ R Sbjct: 128 RGGVPARRRETANPPGPGRARPGGSPFGHRPLLQP-----RQIFAPLQAITNQVRPQQRP 182 Query: 77 EPRVASA 83 EP A + Sbjct: 183 EPPPAGS 189 >gi|169163482 PREDICTED: hypothetical protein [Homo sapiens] Length = 396 Score = 27.3 bits (59), Expect = 5.8 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 7/49 (14%) Query: 4 GTQLRGAQLPALGELS-------HRRGGAPALRVAFLHRPALGASLLGG 45 G Q R ALG L+ H RGG A+ A HR LGA++L G Sbjct: 149 GRQRRALGGQALGLLAQVGIGAGHARGGRGAVGPAGQHRARLGAAVLRG 197 >gi|109148544 alkB, alkylation repair homolog 6 isoform 2 [Homo sapiens] Length = 266 Score = 27.3 bits (59), Expect = 5.8 Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 3/57 (5%) Query: 5 TQLRGAQLPALGELSHRRGGAPALRVAFLHR---PALGASLLGGLRLLEPLPQLHLP 58 TQL G +L G L H RG P +L R SL GGL L +LP Sbjct: 79 TQLSGRKLQNWGGLPHPRGMVPERLPPWLQRYVDKVSNLSLFGGLPANHVLVNQYLP 135 >gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens] Length = 1597 Score = 27.3 bits (59), Expect = 5.8 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 5/46 (10%) Query: 34 HRPALGASLLGGLRLLEPLPQLHLPVFLLSPALPPQLRPQCRGEPR 79 H P + A G R+ PLP L + + P PP L P+ RG R Sbjct: 823 HLPPISAP--GSSRIYRPLPPLPI---IDPPTEPPPLPPKSRGRSR 863 >gi|21703710 scotin [Homo sapiens] Length = 240 Score = 26.9 bits (58), Expect = 7.6 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 13/57 (22%) Query: 51 PLPQLHLPVFLLSPALPPQLRPQCRGEPRVASAHLCLLLRGLH-HPRKC--FHCVHC 104 P P++ LP+ LL PP P RGE +C+ RGL P C F C C Sbjct: 6 PAPRILLPLLLLLLLTPP---PGARGE-------VCMASRGLSLFPESCPDFCCGTC 52 >gi|21040263 transmembrane protein 190 [Homo sapiens] Length = 177 Score = 26.9 bits (58), Expect = 7.6 Identities = 11/30 (36%), Positives = 16/30 (53%) Query: 71 RPQCRGEPRVASAHLCLLLRGLHHPRKCFH 100 R C G+ + S +LCL LR + C+H Sbjct: 40 RESCGGQAAIDSPNLCLRLRCCYRNGVCYH 69 >gi|239756892 PREDICTED: hypothetical protein [Homo sapiens] Length = 576 Score = 26.6 bits (57), Expect = 9.9 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 15/65 (23%) Query: 25 APALRVAFLHRPALGASLLGGLRLLEP--LPQLHLPVFLLSPALPPQLRPQCRGEPRVAS 82 +PA R+AF LL G+ + LP LP ++ SP PP P G P Sbjct: 476 SPAYRMAF--------RLLSGMLFSQDALLPGCRLPTYISSPNQPPHSHPD-MGIP---- 522 Query: 83 AHLCL 87 AHL L Sbjct: 523 AHLAL 527 >gi|5729822 Fas-activated serine/threonine kinase isoform 1 [Homo sapiens] Length = 549 Score = 26.6 bits (57), Expect = 9.9 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 7/76 (9%) Query: 62 LSPALPPQLRPQCRGEPRVASAHLCLLLRGLHHPRKCFHCVHCLI---PRAHAPHLHSLA 118 L P PP L+P RG + +A C R L +PR+ H + L P PH+ L Sbjct: 188 LPPKPPPPLQPLLRGGQGLEAALSC--PRFLRYPRQ--HLISSLAEARPEELTPHVMVLL 243 Query: 119 VDQEAHSKSGGSQVLQ 134 A + Q+L+ Sbjct: 244 AQHLARHRLREPQLLE 259 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.327 0.141 0.450 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,413,434 Number of Sequences: 37866 Number of extensions: 391017 Number of successful extensions: 1384 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 29 Number of HSP's that attempted gapping in prelim test: 1375 Number of HSP's gapped (non-prelim): 38 length of query: 161 length of database: 18,247,518 effective HSP length: 94 effective length of query: 67 effective length of database: 14,688,114 effective search space: 984103638 effective search space used: 984103638 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.