Guide to the Human Genome
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Name: ALKBH6 Sequence: fasta or formatted (161aa) NCBI GI: 38570140
Description:

alkB, alkylation repair homolog 6 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {266aa} alkB, alkylation repair homolog 6 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         12           4
 C cysteine            0.6          1           1
 D aspartate           2.5          4           1
 E glutamate           7.5         12           4
 F phenylalanine       2.5          4           1
 G glycine            11.8         19           2
 H histidine           3.1          5           2
 I isoleucine          3.1          5           1
 K lysine              3.7          6           1
 L leucine            12.4         20           2
 M methionine          3.7          6           1
 N asparagine          3.7          6           1
 P proline             9.9         16           2
 Q glutamine           5.0          8           1
 R arginine            8.1         13           1
 S serine              2.5          4           1
 T threonine           0.6          1           1
 V valine              6.8         11           1
 W tryptophan          1.9          3           1
 Y tyrosine            3.1          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alkB, alkylation repair homolog 6 isoform 1 
ALKBH6                0.878   alkB, alkylation repair homolog 6 isoform 2 
ALKBH8                0.026   alkB, alkylation repair homolog 8 
MCM2                  0.013   minichromosome maintenance complex component 2 [Homo...
PGAP2                 0.010   FGF receptor activating protein 1 isoform 3 
TTN                   0.006   titin isoform N2-A 
RLN1                  0.006   relaxin 1 preproprotein 
HPX-2                 0.006   PREDICTED: similar to double homeobox, 4 
TCERG1                0.006   transcription elongation regulator 1 isoform 2 [Homo...
TCERG1                0.006   transcription elongation regulator 1 isoform 1 [Homo...
ALKBH4                0.006   alkB, alkylation repair homolog 4 
TLE4                  0.006   transducin-like enhancer protein 4 
PRDM14                0.006   PR domain containing 14 
PRICKLE1              0.006   prickle homolog 1 
PRICKLE1              0.006   prickle homolog 1 
PRICKLE1              0.006   prickle homolog 1 
PRICKLE1              0.006   prickle homolog 1 
LOC100290964          0.006   PREDICTED: hypothetical protein XP_002347802 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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