Guide to the Human Genome
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Name: DCST2 Sequence: fasta or formatted (773aa) NCBI GI: 109240536
Description:

DC-STAMP domain containing 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         62           3
 C cysteine            3.0         23           1
 D aspartate           3.6         28           2
 E glutamate           4.8         37           2
 F phenylalanine       4.3         33           2
 G glycine             5.8         45           2
 H histidine           2.7         21           2
 I isoleucine          3.4         26           1
 K lysine              2.6         20           1
 L leucine            14.6        113           4
 M methionine          2.1         16           2
 N asparagine          2.5         19           1
 P proline             6.2         48           3
 Q glutamine           5.2         40           3
 R arginine            6.9         53           3
 S serine              8.0         62           2
 T threonine           4.4         34           2
 V valine              7.5         58           2
 W tryptophan          1.2          9           1
 Y tyrosine            3.4         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DC-STAMP domain containing 2 
DCST1                 0.094   DC-STAMP domain containing 1 isoform 1 
DCST1                 0.093   DC-STAMP domain containing 1 isoform 2 
TM7SF4                0.029   dendritic cell-specific transmembrane protein 
C20orf123             0.019   PREDICTED: chromosome 20 open reading frame 123 [Ho...
C20orf123             0.019   PREDICTED: hypothetical protein LOC128506 
C20orf123             0.019   PREDICTED: hypothetical protein LOC128506 
C20orf123             0.019   hypothetical protein LOC128506 
ZC3H4                 0.016   zinc finger CCCH-type containing 4 
MLL4                  0.014   myeloid/lymphoid or mixed-lineage leukemia 4 
PRR12                 0.012   proline rich 12 
WBP11                 0.012   WW domain binding protein 11 
MYPOP                 0.011   Myb protein P42POP 
CCNK                  0.011   cyclin K isoform 1 
BRD4                  0.010   bromodomain-containing protein 4 isoform long 
MICAL3                0.010   microtubule associated monoxygenase, calponin and L...
YLPM1                 0.010   YLP motif containing 1 
ATXN2                 0.010   ataxin 2 
PHC1                  0.010   polyhomeotic 1-like 
FAM75A3               0.010   hypothetical protein LOC727830 
KDM6B                 0.009   lysine (K)-specific demethylase 6B 
MORC2                 0.009   MORC family CW-type zinc finger 2 
FAM75C1               0.009   family with sequence similarity 75, member C1 [Homo...
ENAH                  0.009   enabled homolog isoform a 
ENAH                  0.009   enabled homolog isoform b 
NCOR2                 0.009   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.009   nuclear receptor co-repressor 2 isoform 1 
BIN1                  0.009   bridging integrator 1 isoform 6 
BIN1                  0.009   bridging integrator 1 isoform 5 
BIN1                  0.009   bridging integrator 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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