Guide to the Human Genome
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Name: PGAP2 Sequence: fasta or formatted (315aa) NCBI GI: 7657102
Description:

FGF receptor activating protein 1 isoform 1

Referenced in:

GPI Anchoring

Other entries for this name:
alt prot [307aa] FGF receptor activating protein 1 isoform 2
alt prot [161aa] FGF receptor activating protein 1 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         22           2
 C cysteine            4.4         14           2
 D aspartate           2.5          8           1
 E glutamate           3.8         12           2
 F phenylalanine       9.8         31           3
 G glycine             3.8         12           2
 H histidine           3.2         10           1
 I isoleucine          5.1         16           2
 K lysine              2.2          7           2
 L leucine            11.4         36           2
 M methionine          2.5          8           1
 N asparagine          3.2         10           1
 P proline             4.4         14           1
 Q glutamine           1.9          6           1
 R arginine            5.1         16           1
 S serine              7.0         22           3
 T threonine           7.3         23           2
 V valine              7.9         25           2
 W tryptophan          3.2         10           2
 Y tyrosine            4.1         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FGF receptor activating protein 1 isoform 1 
PGAP2                 0.686   FGF receptor activating protein 1 isoform 2 
USP24                 0.011   ubiquitin specific protease 24 
OR8K3                 0.008   olfactory receptor, family 8, subfamily K, member 3 ...
CATSPERG              0.008   hypothetical protein LOC57828 
CELA2B                0.008   elastase 2B preproprotein 
CTRC                  0.006   chymotrypsin C preproprotein 
LOC100131755          0.006   PREDICTED: similar to hCG1792883 
LOC100131755          0.006   PREDICTED: similar to hCG1792883 
LOC100131755          0.006   PREDICTED: similar to hCG1792883 
CELA2A                0.006   elastase 2A preproprotein 
TSPAN31               0.006   sarcoma amplified sequence 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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