Guide to the Human Genome
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Name: NFATC3 Sequence: fasta or formatted (1045aa) NCBI GI: 27886559
Description:

nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 isoform 4

Referenced in:

T cells

Other entries for this name:
alt prot [1065aa] nuclear factor of activated T-cells, cytoplasmic, calcineurin-dep...
alt prot [1075aa] nuclear factor of activated T-cells, cytoplasmic, calcineurin-dep...
alt prot [1068aa] nuclear factor of activated T-cells, cytoplasmic, calcineurin-dep...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         56           3
 C cysteine            2.7         28           1
 D aspartate           4.5         47           2
 E glutamate           5.3         55           2
 F phenylalanine       2.8         29           1
 G glycine             7.0         73           2
 H histidine           4.7         49           2
 I isoleucine          4.7         49           3
 K lysine              3.4         36           2
 L leucine             8.1         85           2
 M methionine          1.1         12           1
 N asparagine          2.5         26           2
 P proline            11.1        116           4
 Q glutamine           5.6         58           2
 R arginine            3.8         40           2
 S serine             14.2        148           2
 T threonine           5.6         58           2
 V valine              4.7         49           2
 W tryptophan          0.7          7           1
 Y tyrosine            2.3         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear factor of activated T-cells, cytoplasmic, ca... 
NFATC3                0.995   nuclear factor of activated T-cells, cytoplasmic, cal...
NFATC3                0.993   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC3                0.991   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC4                0.265   nuclear factor of activated T-cells, cytoplasmic, c...
NFATC4                0.265   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC1                0.251   nuclear factor of activated T-cells, cytosolic compo...
NFATC1                0.250   nuclear factor of activated T-cells, cytosolic compo...
NFATC1                0.250   nuclear factor of activated T-cells, cytosolic compo...
NFATC1                0.250   nuclear factor of activated T-cells, cytosolic compo...
NFATC2                0.201   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC2                0.201   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC2                0.200   nuclear factor of activated T-cells, cytoplasmic, c...
NFATC1                0.140   nuclear factor of activated T-cells, cytosolic compo...
NFAT5                 0.094   nuclear factor of activated T-cells 5 isoform c [Homo...
NFAT5                 0.094   nuclear factor of activated T-cells 5 isoform a [Hom...
NFAT5                 0.094   nuclear factor of activated T-cells 5 isoform b [Ho...
NFAT5                 0.094   nuclear factor of activated T-cells 5 isoform a [Hom...
NFAT5                 0.093   nuclear factor of activated T-cells 5 isoform d [Ho...
RELA                  0.017   v-rel reticuloendotheliosis viral oncogene homolog ...
RELA                  0.017   v-rel reticuloendotheliosis viral oncogene homolog ...
FLJ22184              0.014   PREDICTED: hypothetical protein FLJ22184 
MUC4                  0.014   mucin 4 isoform a 
MUC17                 0.014   mucin 17 
SEC24B                0.013   SEC24 (S. cerevisiae) homolog B isoform b 
MAGEC1                0.010   melanoma antigen family C, 1 
POLR2A                0.009   DNA-directed RNA polymerase II A 
CREBBP                0.009   CREB binding protein isoform b 
CREBBP                0.009   CREB binding protein isoform a 
OGFR                  0.009   opioid growth factor receptor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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