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Search of human proteins with 223972612
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|223972612 Crm, cramped-like [Homo sapiens]
(1269 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|223972612 Crm, cramped-like [Homo sapiens] 2551 0.0
gi|163965366 nascent polypeptide-associated complex alpha subuni... 61 6e-09
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 56 2e-07
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 55 3e-07
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 55 4e-07
gi|167736355 mucin 4 isoform a [Homo sapiens] 53 2e-06
gi|91982772 mucin 17 [Homo sapiens] 50 1e-05
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 49 2e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 49 2e-05
gi|239508790 PREDICTED: hypothetical protein, partial [Homo sapi... 49 3e-05
gi|156616290 collagen type VI alpha 6 [Homo sapiens] 48 5e-05
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 48 5e-05
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 48 7e-05
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 48 7e-05
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 48 7e-05
gi|48762934 alpha 2 type I collagen [Homo sapiens] 48 7e-05
gi|19920317 cytoskeleton-associated protein 4 [Homo sapiens] 47 9e-05
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 47 9e-05
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 47 9e-05
gi|236459851 ubinuclein 2 [Homo sapiens] 47 1e-04
gi|58530876 melanoma antigen family C, 1 [Homo sapiens] 47 1e-04
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 47 1e-04
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 47 2e-04
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 47 2e-04
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 47 2e-04
gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 47 2e-04
gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens] 46 2e-04
gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo ... 46 2e-04
gi|29725624 collagen, type XXIII, alpha 1 [Homo sapiens] 46 2e-04
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 46 2e-04
>gi|223972612 Crm, cramped-like [Homo sapiens]
Length = 1269
Score = 2551 bits (6613), Expect = 0.0
Identities = 1269/1269 (100%), Positives = 1269/1269 (100%)
Query: 1 MTVKLGDGGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPP 60
MTVKLGDGGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPP
Sbjct: 1 MTVKLGDGGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPP 60
Query: 61 APPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGKGAEGG 120
APPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGKGAEGG
Sbjct: 61 APPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGKGAEGG 120
Query: 121 GSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGKKVRRQWESWSTEDKNTFFEGLYE 180
GSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGKKVRRQWESWSTEDKNTFFEGLYE
Sbjct: 121 GSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGKKVRRQWESWSTEDKNTFFEGLYE 180
Query: 181 HGKDFEAIQNNIALKYKKKGKPASMVKNKEQVRHFYYRTWHKITKYIDFDHVFSRGLKKS 240
HGKDFEAIQNNIALKYKKKGKPASMVKNKEQVRHFYYRTWHKITKYIDFDHVFSRGLKKS
Sbjct: 181 HGKDFEAIQNNIALKYKKKGKPASMVKNKEQVRHFYYRTWHKITKYIDFDHVFSRGLKKS 240
Query: 241 SQELYGLICYGELRKKIGGCMDDKNATKLNELIQVGATTVRYKGRNLRIKAPMCRALKKL 300
SQELYGLICYGELRKKIGGCMDDKNATKLNELIQVGATTVRYKGRNLRIKAPMCRALKKL
Sbjct: 241 SQELYGLICYGELRKKIGGCMDDKNATKLNELIQVGATTVRYKGRNLRIKAPMCRALKKL 300
Query: 301 CDPDGLSDEEDQKPVRLPLKVPIELQPRNNHAWARVQSLAQNPRLRMIVELHRKVSSLIE 360
CDPDGLSDEEDQKPVRLPLKVPIELQPRNNHAWARVQSLAQNPRLRMIVELHRKVSSLIE
Sbjct: 301 CDPDGLSDEEDQKPVRLPLKVPIELQPRNNHAWARVQSLAQNPRLRMIVELHRKVSSLIE 360
Query: 361 FLKQKWALHEVRVRKTLEERQLQDSCSAPMQEKVTLHLFPGENCTLTPLPGVARVVHSKA 420
FLKQKWALHEVRVRKTLEERQLQDSCSAPMQEKVTLHLFPGENCTLTPLPGVARVVHSKA
Sbjct: 361 FLKQKWALHEVRVRKTLEERQLQDSCSAPMQEKVTLHLFPGENCTLTPLPGVARVVHSKA 420
Query: 421 FCTVHWQEGGRCKQSAKDAHVLPPAQILGIQSGQGTARGQVKCPRSGAEGKGVGRPPPAA 480
FCTVHWQEGGRCKQSAKDAHVLPPAQILGIQSGQGTARGQVKCPRSGAEGKGVGRPPPAA
Sbjct: 421 FCTVHWQEGGRCKQSAKDAHVLPPAQILGIQSGQGTARGQVKCPRSGAEGKGVGRPPPAA 480
Query: 481 DALQSSGESSPESAPGEGAALSLSSPDAPDRPPPRHQDTGPCLEKTPAEGRDSPTREPGA 540
DALQSSGESSPESAPGEGAALSLSSPDAPDRPPPRHQDTGPCLEKTPAEGRDSPTREPGA
Sbjct: 481 DALQSSGESSPESAPGEGAALSLSSPDAPDRPPPRHQDTGPCLEKTPAEGRDSPTREPGA 540
Query: 541 LPCACGQLPDLEDELSLLDPLPRYLKSCQDLIVPEQCRCADTRPGSEQPPLGGAASPEVL 600
LPCACGQLPDLEDELSLLDPLPRYLKSCQDLIVPEQCRCADTRPGSEQPPLGGAASPEVL
Sbjct: 541 LPCACGQLPDLEDELSLLDPLPRYLKSCQDLIVPEQCRCADTRPGSEQPPLGGAASPEVL 600
Query: 601 APVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEELQEKGSPAGPPPSQGQPAARP 660
APVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEELQEKGSPAGPPPSQGQPAARP
Sbjct: 601 APVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEELQEKGSPAGPPPSQGQPAARP 660
Query: 661 PKEVPASRLAQQLREEGWNLQTSESLTLAEVYLMMGKPSKLQLEYDWLGPGRQDPRPGSL 720
PKEVPASRLAQQLREEGWNLQTSESLTLAEVYLMMGKPSKLQLEYDWLGPGRQDPRPGSL
Sbjct: 661 PKEVPASRLAQQLREEGWNLQTSESLTLAEVYLMMGKPSKLQLEYDWLGPGRQDPRPGSL 720
Query: 721 PTALHKQRLLSCLLKLISTEVNPKLALEANTISTASVRPAQEEQSMTPPGKVVTVSSRSP 780
PTALHKQRLLSCLLKLISTEVNPKLALEANTISTASVRPAQEEQSMTPPGKVVTVSSRSP
Sbjct: 721 PTALHKQRLLSCLLKLISTEVNPKLALEANTISTASVRPAQEEQSMTPPGKVVTVSSRSP 780
Query: 781 RCPRNQASLRSSKTFPPSSAPCSSGLRNPPRPLLVPGPSSTGSNDSDGGLFAVPTTLPPN 840
RCPRNQASLRSSKTFPPSSAPCSSGLRNPPRPLLVPGPSSTGSNDSDGGLFAVPTTLPPN
Sbjct: 781 RCPRNQASLRSSKTFPPSSAPCSSGLRNPPRPLLVPGPSSTGSNDSDGGLFAVPTTLPPN 840
Query: 841 SRHGKLFSPSKEAELTFRQHLNSISMQSDFFLPKPRKLRNRHLRKPLVVQRTLLPRPSEN 900
SRHGKLFSPSKEAELTFRQHLNSISMQSDFFLPKPRKLRNRHLRKPLVVQRTLLPRPSEN
Sbjct: 841 SRHGKLFSPSKEAELTFRQHLNSISMQSDFFLPKPRKLRNRHLRKPLVVQRTLLPRPSEN 900
Query: 901 QSHNVCSFSILSNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPPQATSHLASAIDLAAT 960
QSHNVCSFSILSNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPPQATSHLASAIDLAAT
Sbjct: 901 QSHNVCSFSILSNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPPQATSHLASAIDLAAT 960
Query: 961 SAGILSGNPLPALDTEGLSGISPLSSDEVTGAISGQDSTGTHQDGDTLPTVGGSDPFVSI 1020
SAGILSGNPLPALDTEGLSGISPLSSDEVTGAISGQDSTGTHQDGDTLPTVGGSDPFVSI
Sbjct: 961 SAGILSGNPLPALDTEGLSGISPLSSDEVTGAISGQDSTGTHQDGDTLPTVGGSDPFVSI 1020
Query: 1021 PSRPEQEPVADSFQGSSVLSLSELPKAPLQNGLSIPLSSSESSSTRLSPPDVSALLDISL 1080
PSRPEQEPVADSFQGSSVLSLSELPKAPLQNGLSIPLSSSESSSTRLSPPDVSALLDISL
Sbjct: 1021 PSRPEQEPVADSFQGSSVLSLSELPKAPLQNGLSIPLSSSESSSTRLSPPDVSALLDISL 1080
Query: 1081 PGPPEDALSQGEPATHISDSIIEIAISSGQYGEGVPLSPAKLNGSDSSKSLPSPSSSPQP 1140
PGPPEDALSQGEPATHISDSIIEIAISSGQYGEGVPLSPAKLNGSDSSKSLPSPSSSPQP
Sbjct: 1081 PGPPEDALSQGEPATHISDSIIEIAISSGQYGEGVPLSPAKLNGSDSSKSLPSPSSSPQP 1140
Query: 1141 HWIASPTHDPQWYPSDSTDSSLSSLFASFISPEKSRKMLPTPIGTNSGTSLLGPSLLDGN 1200
HWIASPTHDPQWYPSDSTDSSLSSLFASFISPEKSRKMLPTPIGTNSGTSLLGPSLLDGN
Sbjct: 1141 HWIASPTHDPQWYPSDSTDSSLSSLFASFISPEKSRKMLPTPIGTNSGTSLLGPSLLDGN 1200
Query: 1201 SRDSFVSRSLADVAEVVDSQLVCMMNENSIDYISRFNDLAQELSIAEPGRREALFDGGGG 1260
SRDSFVSRSLADVAEVVDSQLVCMMNENSIDYISRFNDLAQELSIAEPGRREALFDGGGG
Sbjct: 1201 SRDSFVSRSLADVAEVVDSQLVCMMNENSIDYISRFNDLAQELSIAEPGRREALFDGGGG 1260
Query: 1261 GPAVSDLSQ 1269
GPAVSDLSQ
Sbjct: 1261 GPAVSDLSQ 1269
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 61.2 bits (147), Expect = 6e-09
Identities = 171/780 (21%), Positives = 246/780 (31%), Gaps = 140/780 (17%)
Query: 435 SAKDAHVLP-PAQILGIQSGQGTARGQVKCPRSGAEGKGVGRP-----PPAADALQSSG- 487
S K A P P I S +G P S G P PPAA G
Sbjct: 917 SPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGG 976
Query: 488 --ESSPESAPGEGAALSLSSPDAPDRPPPRHQDTGPCLEKTPAEGRDSPTREPGALPCAC 545
SP+ AP AA S P P P+ T P + +G + T P
Sbjct: 977 PATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPP 1036
Query: 546 GQLPDLEDELSLLDPLPRYLKSCQDLIVPE--------QCRCADTRPGSEQP-PLGGAAS 596
P PLP+ + +P + A T P + P P GG A+
Sbjct: 1037 AATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPAT 1096
Query: 597 PEVLAPVSKEAADLAPTGPSPRPGPGLLLD----VCTKDLADAPAEE-----LQEKGSP- 646
P S + A + P P P GL T A P+ + KG+P
Sbjct: 1097 P------SPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPT 1150
Query: 647 ---AGPPPSQGQPAARPPKEVPASRLAQQLREEGWNLQTSESLTLAEVYLMMGKPSKLQL 703
A PP +G A PPK P + A +G S G P+
Sbjct: 1151 TPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPK----------GAPTTPAA 1200
Query: 704 EYDWLGPGRQDPRPGSLPTALHKQRLLSCLLKLISTEVNPKLALEANTISTASVRPAQEE 763
G P P PT +T +PK ++T S + A
Sbjct: 1201 TPPSPKGGLATPSPKGAPTT------------PAATPPSPK-----GGLATPSPKGAPTT 1243
Query: 764 QSMTPPGKVVTVSSRSPRCPRNQASLRSSKTFPPSSAPCSSGLRNP-----PRPLLVPGP 818
+ TPP P P + + PPS GL P P P +V P
Sbjct: 1244 PAATPPS-----PKGGPATPPPKGAPTPPAATPPS---LKGGLATPPHKGAPNPAVVTPP 1295
Query: 819 SSTG--SNDSDGGLFAVPTTLPPNSRHGKLFSPSKEAELTFRQHLNSISMQSDFFLPKPR 876
S G + G P PP+ + P K A P P+
Sbjct: 1296 SPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGA-----------PTPPAVTPPSPK 1344
Query: 877 KLRNRHLRKPLVVQRTLLPRPSENQSHNVCSFSILSNSSVTGRGSFRPIQSSLTKAALSR 936
P P E + + S ++T R K +
Sbjct: 1345 GTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTS 1404
Query: 937 PIVPKVLPPQATSHLASAIDLAATSAGILSGNPLPALDTEGLSGISPLSSDE--VTGAIS 994
P V + P +A + + A S G L+ PA ++P+S + T A
Sbjct: 1405 PAVIPLSPKKAPATPVTREGAATPSKGDLTP---PA--------VTPVSLKKAPATSAPK 1453
Query: 995 GQDSTGTHQDGDTLPTVGGSDP-------FVSIPSRPEQEPVADSFQGSSVL------SL 1041
G +T + + TLP V P V+ S P++ P + G+ L S
Sbjct: 1454 GGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSP 1513
Query: 1042 SELPKAPLQNGLSIPLSS---SESSSTRLSPPDVSALLDISLPGP---PEDALSQGEPAT 1095
E+P P I ++ S+ + L+P + +++P P P + PAT
Sbjct: 1514 KEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPAT 1573
Query: 1096 HISDSIIEIAISSGQYGEGVPLSPAKLNGSDSSKSL--------PSPSSSPQPHWIASPT 1147
SS + ++P+ G+ S K L PSP +P P + P+
Sbjct: 1574 P----------SSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPS 1623
Score = 56.6 bits (135), Expect = 1e-07
Identities = 179/774 (23%), Positives = 250/774 (32%), Gaps = 137/774 (17%)
Query: 428 EGGRCKQSAKDAHVLPPAQILGIQSGQGTARGQVKCPRSGAEGKGVGRPPPAADALQSSG 487
+GG S K A P A + G T + GA PP L +
Sbjct: 1183 KGGLATPSPKGAPTTPAATPPSPKGGLATPSPK------GAPTTPAATPPSPKGGLATP- 1235
Query: 488 ESSPESAPGEGAALSLSSPDAPDRPPPRHQDTGPCLEKTPAEGRDSPTREPGALPCACGQ 547
SP+ AP AA S P PPP+ T P +G + GA A
Sbjct: 1236 --SPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVT 1293
Query: 548 LPDLEDELSLLDPLPRYLKSCQDLIVPEQCRCADTRPGSEQPPLGGAASPEVLAPVSKEA 607
P + + P P+ PG+ PP G P V P K
Sbjct: 1294 PPSPKGGPATSPPKGAPTPPAATPPSPK------GSPGT-PPPKGAPTPPAVTPPSPKGT 1346
Query: 608 ADLAPTGPSPRPGPGLLLDVCTKDLADAPAEELQEKGSPAGPPPSQGQ-PAARPPKEVPA 666
L T PS + GP +K+ PA KG PA PPS + PA PK P
Sbjct: 1347 PTLPATTPSSKGGP---TTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPT 1403
Query: 667 SRL----------AQQLREEGWNLQTSESLTLAEVYLM-----------MGKPSKLQLEY 705
S A + EG + LT V + G P+ +
Sbjct: 1404 SPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKG 1463
Query: 706 DWLGPGRQDPRPGSLPTALHKQRLLSCLLKLISTEVNPKLALEANTISTASVRPAQEEQS 765
D P P P P K ++T +PK A A PA S
Sbjct: 1464 DPTLPAVTPPSPKEPPAP-----------KQVATSSSPKKAPATPAPMGAPTLPAVIPSS 1512
Query: 766 MTPPGKVVTVSS-RSPRCPRNQASLRSSKTFPPSSAPCSSGLRNPPRPLLVPGPSSTGSN 824
P T SS R P P A+L S KT P + AP + + P + VP P T +
Sbjct: 1513 --PKEVPATPSSRRDPIAP--TATLLSKKT-PATLAPKEALI---PPAMTVPSPKKTPA- 1563
Query: 825 DSDGGLFAVPTTLPPNSRHGKLFSPSKEAELTFRQHLNSISMQSDFFLPKPRKLRNRHLR 884
P P + SP T++ P P++L
Sbjct: 1564 ------IPTPKEAPATPSSKEASSPPAVTPSTYKG------------APSPKEL------ 1599
Query: 885 KPLVVQRTLLPRPSENQSHNVCSFSILSNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLP 944
L+ P P E + ++ S G P + S P+ P L
Sbjct: 1600 --LIPPAVTSPSPKEAPTPP----AVTPPSPEKG-----PATPAPKGTPTSPPVTPSSLK 1648
Query: 945 PQATSHLASAIDLAATSAGILSGNPL---PALDTEGLSGISPLSSDEVTGAISGQDSTGT 1001
TS + + AT G P P E L +P S+ +T + T
Sbjct: 1649 DSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPT--RKGPQT 1706
Query: 1002 HQDGDTLPTV--------GGSDPFVSI---PSRPEQEPVADSFQGSSVLSLSELPKAPLQ 1050
+ T P + G P ++ P P Q+ + + +G + P AP +
Sbjct: 1707 KKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPE 1766
Query: 1051 NGLSIPLSSS---------ESSSTRLSP-PDVSALLDIS-----------LPGPPEDAL- 1088
+ S PL+++ ES+S +P P VS L S LP P L
Sbjct: 1767 SKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLE 1826
Query: 1089 SQGEPATHISDSIIEIAISSGQYGEGVPLSPAKLN-GSDSSKSLPSPS-SSPQP 1140
S +P + + I GVP +N + S +P P+ S+ QP
Sbjct: 1827 SPSKPLAPADEDELLPLIPPEPISGGVPFQSVLVNMPTPKSAGIPVPTPSAKQP 1880
Score = 52.4 bits (124), Expect = 3e-06
Identities = 168/739 (22%), Positives = 249/739 (33%), Gaps = 143/739 (19%)
Query: 471 KGVGRPPPAADALQSSGESSPESAPGEGAALSLSSPDAPDRPPPRHQDTGPCLEKTPAEG 530
+G P P S SSP+ A A + P P P+ T P TP
Sbjct: 898 EGPATPAPKQAPALSMTSSSPKKARATPAPKGI-----PASPSPKGAPTPPA--ATPPSP 950
Query: 531 RDSPTREPGALPCACGQLPDLEDELSLLDPLPRYLKSCQDLIVPEQCRCADTRPGSEQPP 590
+ P P P++ + P + G P
Sbjct: 951 KGGPA-----------------------TPSPKWAPT------PPAATPPSPKGGPATPS 981
Query: 591 LGGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEELQEKGS---PA 647
GA +P P S + P+ P P P + K +PA KG+ PA
Sbjct: 982 PKGAPTPPAATPPSPKGGPATPS-PKGAPTPPAVTPPSPK---GSPAATPFPKGASTPPA 1037
Query: 648 GPPPS-QGQPAARP-PKEVPASRLAQQLREEGW----NLQTSESLTLAEVYLMMGKPSKL 701
PPS +G PAA P PK P + A +G +L+ + + A G P+
Sbjct: 1038 ATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATP 1097
Query: 702 QLEYDWLGPGRQDPRP-GSLPTALHKQRLLSCLLKLISTEVNPKLALEANTISTASVRPA 760
+ + P P P G L T HK +T +PK L A PA
Sbjct: 1098 SPKGAPMPPAATPPSPKGGLATPPHK----GAPTTPAATPPSPKGGLATPPPKGAPTTPA 1153
Query: 761 QEEQS-----MTPPGK-VVTVSSRSPRCPRNQASLRSSKTFPPSSAPCSSGLRNPPRP-- 812
S TPP K T + +P P+ + S K P + A PP P
Sbjct: 1154 ATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPA------ATPPSPKG 1207
Query: 813 -LLVPGPSSTGSNDSDGGLFAVPTTLPPNSRHGKLFSPSKEAELTFRQHLNSISMQSDFF 871
L P P G P PP+ + G L +PS + T S +
Sbjct: 1208 GLATPSPK---------GAPTTPAATPPSPK-GGLATPSPKGAPT-TPAATPPSPKGGPA 1256
Query: 872 LPKPRKLRNRHLRKPLVVQRTLLPRPSENQSHNVCSFSILSNSSVTGRGSFRPIQSSLTK 931
P P+ P ++ L P + + ++++ S G + P + + T
Sbjct: 1257 TPPPKGAPTPPAATPPSLKGGLATPPHKGAPNP----AVVTPPSPKGGPATSPPKGAPTP 1312
Query: 932 AALSRPIVPKVLPPQATSHLASAIDLAATSAGILSGNP-LPALDTEGLSGISPLSSDEVT 990
A + P PK P T A A + G P LPA G + SS E
Sbjct: 1313 PAATPP-SPKGSP--GTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKE-- 1367
Query: 991 GAISGQDSTGTHQDGDTLPTVGGSDPFVSIPSRPEQEPVADSFQGSSV------LSLSEL 1044
+ +T +H+ G + P P++ P S +G LS +
Sbjct: 1368 -GPTPPAATPSHKGGPAM-----------TPPSPKRGPAIPSPKGDPTSPAVIPLSPKKA 1415
Query: 1045 PKAPL-QNGLSIPLSSSESSSTRLSPPDVSALLDISLPGPPEDALSQGEPATHISDSIIE 1103
P P+ + G + P S L+PP A+ +SL P + +G PAT S
Sbjct: 1416 PATPVTREGAATP------SKGDLTPP---AVTPVSLKKAPATSAPKGGPATPSS----- 1461
Query: 1104 IAISSGQYGEGVPLSPAKLNGSDSSKSLPSPSSSPQPHWIASPTHDPQWYPSDSTDSSLS 1163
+G P PA + PSP P P +A+ + P+ P+
Sbjct: 1462 ---------KGDPTLPA--------VTPPSPKEPPAPKQVAT-SSSPKKAPATPAPMGAP 1503
Query: 1164 SLFASFISPEKSRKMLPTP 1182
+L A + P +++ TP
Sbjct: 1504 TLPA--VIPSSPKEVPATP 1520
Score = 34.7 bits (78), Expect = 0.60
Identities = 30/98 (30%), Positives = 38/98 (38%), Gaps = 27/98 (27%)
Query: 45 TKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGS 104
T + P A PP+P G P P PP+G+P P PPS G
Sbjct: 1234 TPSPKGAPTTPAATPPSPKGGPATP-PPKGAPTP---------------PAATPPSLKG- 1276
Query: 105 GNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSS 142
G + P KGA N + V P +P GG +S
Sbjct: 1277 ---GLATPPHKGAP-------NPAVVTPPSPKGGPATS 1304
Score = 32.7 bits (73), Expect = 2.3
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 19/90 (21%)
Query: 45 TKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGS 104
T + P A PP+P G+P P PP+G+P P PPS G+
Sbjct: 1303 TSPPKGAPTPPAATPPSPKGSPGTP-PPKGAPTP---------------PAVTPPSPKGT 1346
Query: 105 GNAGGSGPRGKGAEGGGSSSGNVSGVAPAA 134
+ P K GG ++ + G P A
Sbjct: 1347 PTLPATTPSSK---GGPTTPSSKEGPTPPA 1373
Score = 32.0 bits (71), Expect = 3.9
Identities = 28/102 (27%), Positives = 35/102 (34%), Gaps = 12/102 (11%)
Query: 42 SSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSA 101
SS K+ TP G PA P AP+PP +P P K P +
Sbjct: 915 SSSPKKARATP--APKGIPASPSPKGAPTPPAATPPSPK---GGPATPSPKWAPTPPAAT 969
Query: 102 VGSGNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSS 143
S G + P KGA P +P GG + S
Sbjct: 970 PPSPKGGPATPSPKGAP-------TPPAATPPSPKGGPATPS 1004
Score = 31.2 bits (69), Expect = 6.6
Identities = 36/128 (28%), Positives = 47/128 (36%), Gaps = 37/128 (28%)
Query: 45 TKRDEKTPRAGADGPPAPPGAPQAPSP-------------PQGSPQDQHHFLRSSVRPQS 91
T + P A PP+P G P PSP P+GSP F + + P
Sbjct: 979 TPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPA-ATPFPKGASTP-- 1035
Query: 92 KRPRKDPPSAVGSGNAGGSGPRGKGA----------EGGGSSSGNVSG------VAPAAP 135
P PPS GS A P KGA GG ++ ++ G P +P
Sbjct: 1036 --PAATPPSPKGSPAA---TPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSP 1090
Query: 136 AGGSRSSS 143
GG + S
Sbjct: 1091 KGGPATPS 1098
Score = 31.2 bits (69), Expect = 6.6
Identities = 24/89 (26%), Positives = 31/89 (34%), Gaps = 8/89 (8%)
Query: 52 PRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSG 111
P A PP+P G P PS P+G+P ++ P K PP +
Sbjct: 1080 PTPPAATPPSPKGGPATPS-PKGAPMPP-----AATPPSPKGGLATPPHKGAPTTPAATP 1133
Query: 112 PRGKGAEGGGSSSG--NVSGVAPAAPAGG 138
P KG G P +P GG
Sbjct: 1134 PSPKGGLATPPPKGAPTTPAATPPSPKGG 1162
Score = 31.2 bits (69), Expect = 6.6
Identities = 30/107 (28%), Positives = 35/107 (32%), Gaps = 27/107 (25%)
Query: 52 PRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSG 111
P PP+P G P A SPP+G+P P PPS GS
Sbjct: 1287 PNPAVVTPPSPKGGP-ATSPPKGAPTP---------------PAATPPSPKGSPGT---- 1326
Query: 112 PRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGKK 158
P KGA V P +P G + S GG K
Sbjct: 1327 PPPKGAP-------TPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSK 1366
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 56.2 bits (134), Expect = 2e-07
Identities = 144/620 (23%), Positives = 219/620 (35%), Gaps = 94/620 (15%)
Query: 582 TRPGSEQPPLGGAASPEVLAPVSKEAADLA---PTGPSPRPGPGLLLDVCTKDLADAPAE 638
+RP PL SP +L P+ ++ G S GPG + P
Sbjct: 2118 SRPSMSPTPLDRCRSPGMLEPLGSSRTPMSVLQQAGGSMMDGPGPRIP--DHQRTSVPEN 2175
Query: 639 ELQEKGSPAGPPPSQGQPAARPPKEVPASRLAQQLREEG-----WNLQTSESLTLAEVYL 693
Q + + A S G ARPP + A+ LA ++ + +L+T+ + LA +
Sbjct: 2176 HAQSRIALALTAISLG--TARPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLAS-RI 2232
Query: 694 MMGKPSKLQLEYDWLGPGRQDPRPGSLPTALHKQRLLSCLLKLISTEVNPKLALEANTIS 753
+ + L R ++PTA++ + +P+ A+ + ++
Sbjct: 2233 PAASAAAMNLA---------SARTPAIPTAVNLADSRTPAAAAAMNLASPRTAVAPSAVN 2283
Query: 754 TASVRPAQEEQSMTPPGKVVTVSSRSPRCPRNQASLRSSKTFPPSSAPCSSGLRNPPRPL 813
A R TP V ++ SL S T PP++A S R P P
Sbjct: 2284 LADPR--------TPTAPAVNLAGARTPAALAALSLTGSGT-PPTAANYPSSSRTPQAPA 2334
Query: 814 L--VPGPSSTGSNDSDGGLFAVPTTLPPNSRHGKLFSPSKEAELTFRQHLNSISMQSDFF 871
+ GP S + T P N + + A LT + ++S +
Sbjct: 2335 SANLVGPRSAHA------------TAPVNIAGSRTAAALAPASLTSARMAPALSGAN--- 2379
Query: 872 LPKPRKLRNRHLR------KPLVVQRTLLPRPSENQSHNVCSFSILSNSSVTGRGSFRPI 925
L PR + + R PL+ + PS + S S SS G+ P
Sbjct: 2380 LTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPSPSSRMGQA---PS 2436
Query: 926 QSSLTKAA-LSRPIVPKVLPPQATSHLASAIDLAATSAGILSGNPLPALDTEGLSGISPL 984
QS L A R VP Q+ +A +A + + + G +
Sbjct: 2437 QSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSL-----------SSGAVATTTS 2485
Query: 985 SSDEVTGAISGQDSTGTHQD-GDTLPTVGGSDPFVSIPSRPEQEPVADSFQGSSVLSLSE 1043
S+ + G +S H D G+ + G P +P +E + S SS S S
Sbjct: 2486 SAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSS 2545
Query: 1044 LPKAPLQNGLSIPLSSSESSSTRLSPPDVSALLDISLPGPPEDALSQGEPATHISDSIIE 1103
SSS SSS+ S S SLP PE AL + T
Sbjct: 2546 --------------SSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKE--- 2588
Query: 1104 IAISSGQYGEGVPLSPAKLNGSDSSKSLPSPSSSPQPHWIASPTHDPQWYPSDSTDSSLS 1163
A+ G+ E P + + S SS S S SSS +S + S S+ SS S
Sbjct: 2589 -AVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSS-----SSSSSSSSS 2642
Query: 1164 SLFASFISPEK-SRKMLPTP 1182
S +S SP K + LP P
Sbjct: 2643 SSSSSSPSPAKPGPQALPKP 2662
Score = 40.0 bits (92), Expect = 0.014
Identities = 116/529 (21%), Positives = 178/529 (33%), Gaps = 104/529 (19%)
Query: 472 GVGRPPPAADALQSSGESSPESAPGEGAALSLSSPDAPDRPPPRHQDTGPCLEKTPAEGR 531
G RPPP+ A + S AP + L S L PA
Sbjct: 2191 GTARPPPSMSAAGLAARMSQVPAP-----VPLMS-----------------LRTAPAANL 2228
Query: 532 DS--PTREPGALPCACGQLPDLEDELSLLD------PLPRYLKSCQDLIVPEQCRCADTR 583
S P A+ A + P + ++L D L S + + P AD R
Sbjct: 2229 ASRIPAASAAAMNLASARTPAIPTAVNLADSRTPAAAAAMNLASPRTAVAPSAVNLADPR 2288
Query: 584 -PGSEQPPLGGAASPEVLAPVSKEAADLAPTG---PSPRPGPGLLLDVCTKDLADAPAEE 639
P + L GA +P LA +S + PT PS P A A A
Sbjct: 2289 TPTAPAVNLAGARTPAALAALSLTGSGTPPTAANYPSSSRTP----------QAPASANL 2338
Query: 640 LQEKGSPAGPP---PSQGQPAARPPKEVPASRLAQQLREEGWNLQTSESLTLAEVYLMMG 696
+ + + A P AA P + ++R+A L G NL TS + L+ + G
Sbjct: 2339 VGPRSAHATAPVNIAGSRTAAALAPASLTSARMAPAL--SGANL-TSPRVPLSAYERVSG 2395
Query: 697 KPSKLQLE---------------------------------YDWLGPGRQDPRPGSLPTA 723
+ S L+ L P + PR +P+A
Sbjct: 2396 RTSPPLLDRARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPR-SPVPSA 2454
Query: 724 LHKQRLLSCLLKLISTEVNPKLALEANTISTASVRPAQEEQSMTPPGKVVTVS------- 776
Q CL+ +T V +L + ++T + ++ P V S
Sbjct: 2455 FSDQS--RCLIAQ-TTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPA 2511
Query: 777 SRSPRCPRNQASLRSSKTFPPSSAPCSSGLRNPPRPLLVPGPSSTGSNDSDGGLFAVPTT 836
S + P A+L+ +K SS+ SS + SS+GS+ SD ++P
Sbjct: 2512 STGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLP-- 2569
Query: 837 LPPNSRHGKLFSPSKEAELTFRQHLNSISMQSDFFLPKPRKLRNRHLRKPLVVQRTLLPR 896
+ P ++ SP+ + R+ P P K + R +
Sbjct: 2570 VQPEVALKRVPSPTPAPKEAVREGRPP--------EPTPAKRKRRSSSSSSSSSSSSSSS 2621
Query: 897 PSENQSHNVCSFSILSNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPP 945
S + S + S S S+SS + S P + AL +P PK PP
Sbjct: 2622 SSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPP 2670
Score = 38.5 bits (88), Expect = 0.041
Identities = 115/456 (25%), Positives = 167/456 (36%), Gaps = 83/456 (18%)
Query: 753 STASVRPAQEEQSMTPPGKVVTVSSRSPRCPRNQASLRSSKTFPPSSAPCSSGLRNPPRP 812
S + P +++S TPP + + SS+ P+ S+T P S SS P P
Sbjct: 778 SLSGSSPCPKQKSQTPPRRSRSGSSQ-PKA--------KSRTPPRRSRSSSS-----PPP 823
Query: 813 LLVPGPSSTGSNDSDGGLFAVPTTLPPNSRHGKLFSPSKEAELTFRQHLNSISMQSDFFL 872
S S+ S V + PP R G + SP + Q + D
Sbjct: 824 KQKSKTPSRQSHSSSSPHPKVKSGTPP--RQGSITSPQANEQSVTPQRRSCFESSPD--- 878
Query: 873 PKPRKLRNRHLRKPLVVQRTLLPRPSENQSHNVCSFSILSNSSVTGRGSFRPIQSSLTKA 932
P + RT PS + S SS S P + S +++
Sbjct: 879 -------------PELKSRT----PSRHS---------CSGSSPPRVKSSTPPRQSPSRS 912
Query: 933 ALSRPIVPKVLPPQATSHLASAIDLAATSAGILSGNPLPALDTEGLSGISPLSSDE---- 988
+ +P V ++ P+ SH S ++ S ++ P +SP S+ E
Sbjct: 913 SSPQPKVKAIISPRQRSHSGS----SSPSPSRVTSRTTPRRS----RSVSPCSNVESRLL 964
Query: 989 VTGAISGQDSTGTHQDGDTLPTVGGSDPFVSIPSRPEQEPVADSFQGSSVLSLSELPKAP 1048
+ SG S T +T P S P Q P S GS E K
Sbjct: 965 PRYSHSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQTPPGPSLSGSKSPCPQEKSKDS 1024
Query: 1049 LQNGL--SIPLSSSESSSTRLSPPDVS--ALLDISLPGPPEDALSQGEPATHISDSIIEI 1104
L S+ L + SST PP S + + L G SQ P H SD+
Sbjct: 1025 LVQSCPGSLSLCAGVKSST---PPGESYFGVSSLQLKGQ-----SQTSP-DHRSDT---- 1071
Query: 1105 AISSGQYGEGVPLSPAKLNGSDSS-KSLPSPSSSPQPHWIASPTHDPQWYPSDSTDSSLS 1163
SS + + SP+ + S +S K S SSSP +AS + Q D + S S
Sbjct: 1072 --SSPEVRQSHSESPSLQSKSQTSPKGGRSRSSSPVTE-LASRSPIRQ----DRGEFSAS 1124
Query: 1164 SLFASFISPEKSR-KMLPTPIGTNSGTSLLGPSLLD 1198
+ S +SPE+SR + + T SLLG S L+
Sbjct: 1125 PMLKSGMSPEQSRFQSDSSSYPTVDSNSLLGQSRLE 1160
Score = 38.1 bits (87), Expect = 0.054
Identities = 41/156 (26%), Positives = 57/156 (36%), Gaps = 9/156 (5%)
Query: 380 RQLQDSCSAPMQEKVTLHLFPGENC-TLTPL-----PGVARVVHSKAFCTVHWQEGGRCK 433
++L SA QE+ P T TPL G + V SK+ + G
Sbjct: 1543 QELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSP 1602
Query: 434 QSAKDAHVLPPAQILGIQSGQGTARGQVKCPR---SGAEGKGVGRPPPAADALQSSGESS 490
+ P AQ S + A PR SG+ KG G P + + +SS E
Sbjct: 1603 EVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHP 1662
Query: 491 PESAPGEGAALSLSSPDAPDRPPPRHQDTGPCLEKT 526
P+S + S P R PPR + + E T
Sbjct: 1663 PKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELT 1698
Score = 37.4 bits (85), Expect = 0.092
Identities = 24/76 (31%), Positives = 34/76 (44%)
Query: 465 RSGAEGKGVGRPPPAADALQSSGESSPESAPGEGAALSLSSPDAPDRPPPRHQDTGPCLE 524
RS E K R PP + +SS E + ++ + + SSP+ R PPRH+ +
Sbjct: 1673 RSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSS 1732
Query: 525 KTPAEGRDSPTREPGA 540
PAE S R A
Sbjct: 1733 PEPAEKSRSSRRRRSA 1748
Score = 35.8 bits (81), Expect = 0.27
Identities = 91/418 (21%), Positives = 132/418 (31%), Gaps = 82/418 (19%)
Query: 437 KDAHVLPPAQILGIQSGQGTARGQVKCPRSGAEGKGVGRPPPAADALQSSGESSPESAPG 496
+ AH P I G ++ A + R G P S+ E G
Sbjct: 2342 RSAHATAPVNIAGSRTAAALAPASLTSARMAPALSGANLTSPRVPL------SAYERVSG 2395
Query: 497 EGAALSLSSPDAPDRPPPRHQDTGPCLEKTPAEGRDSPTREPGALPCACGQLPDLEDELS 556
+SP DR R + P + +E SP+ G P S
Sbjct: 2396 R------TSPPLLDRARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQ-----------S 2438
Query: 557 LLDPLPRYLKSCQDLIVPEQCRC--ADTRPGSEQPPLGGAASPEVLAPVSKEAADLAPTG 614
LL P +S +Q RC A T P + L A +A + A D G
Sbjct: 2439 LLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGA----VATTTSSAGD--HNG 2492
Query: 615 PSPRPGPGLLLDVCTKDLADAPAEELQEKGSPAGPPPSQGQPAARPPKEVPASRLAQQLR 674
P PG+ P ++ E PP S G A+ P + A + A++ R
Sbjct: 2493 MLSVPAPGV------------PHSDVGE------PPASTG---AQQPSALAALQPAKERR 2531
Query: 675 EEGWNLQTSESLTLAEVYLMMGKPSKLQLEYDWLGPGRQDPRPGSLPTALHKQRLLSCLL 734
+ +S S + + S G D SLP L
Sbjct: 2532 SSSSSSSSSSSSSSSSSSSSSSSSS---------GSSSSDSEGSSLPVQPEV-----ALK 2577
Query: 735 KLISTEVNPKLAL-EANTISTASVRPAQEEQSMTPPGKVVTVSSRSPRCPRNQASLRSSK 793
++ S PK A+ E + + S + + SS S + +S SS
Sbjct: 2578 RVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2637
Query: 794 TFPPSSAPCSSGLRNPPRPLLVPGPSSTGSNDSDGGLFAVPTTLPPNSRHGKLFSPSK 851
+ SS+ SS P P +P P+S P PP R + SP K
Sbjct: 2638 SSSSSSSSSSSPSPAKPGPQALPKPAS-------------PKKPPPGERRSR--SPRK 2680
Score = 34.3 bits (77), Expect = 0.78
Identities = 48/243 (19%), Positives = 84/243 (34%), Gaps = 34/243 (13%)
Query: 452 SGQGTARGQVKCPRSGAEGKGVGRPPPAADALQSSGESSPESAPGEGAALSLSSPDAPDR 511
S G G + P G VG PP + A Q S ++ + A ++ S SS +
Sbjct: 2485 SSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSS- 2543
Query: 512 PPPRHQDTGPCLEKTPAEGRDSPTREPGALPCACGQLPDLEDELSLL---DPLPRYLKSC 568
+ + + G S E +LP ++ E++L P P ++
Sbjct: 2544 -----SSSSSSSSSSSSSGSSSSDSEGSSLP--------VQPEVALKRVPSPTPAPKEAV 2590
Query: 569 QDLIVPEQCRCADTRPGSEQPPLGGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVC 628
++ PE R S ++S + S ++ + + S
Sbjct: 2591 REGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------ 2638
Query: 629 TKDLADAPAEELQEKGSPAGPPPSQGQPAARPPKEVPASRLAQQLREEGWNLQTSESLTL 688
+ + SPA P P A P K P R ++ R+ +L+ S SL+
Sbjct: 2639 -----SSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSY 2693
Query: 689 AEV 691
+ V
Sbjct: 2694 SPV 2696
Score = 33.1 bits (74), Expect = 1.7
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 15/120 (12%)
Query: 51 TPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGS 110
+PR G +P+ P+ +P+ Q S S P+ P A+ + GS
Sbjct: 1592 SPRRSRSG-----SSPEVKDKPRAAPRAQ------SGSDSSPEPKAPAPRALPRRSRSGS 1640
Query: 111 GPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGKKVRRQWESWSTED 170
+G+G GSSS S P SR++ R SS K + + R+ S S+ +
Sbjct: 1641 SSKGRGPSPEGSSSTESSPEHPPK----SRTARRGSRSSPEPKTKSRTPPRRRSSRSSPE 1696
Score = 32.3 bits (72), Expect = 3.0
Identities = 39/140 (27%), Positives = 53/140 (37%), Gaps = 14/140 (10%)
Query: 12 EDGLKKLGKRAADEESLEG--EGAGGADA---AEESSGTKRDEKTPRAG---ADGPPAPP 63
+DGL + R + S G +G+G + S G K +TP G D P P
Sbjct: 1428 KDGLPRTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPK 1487
Query: 64 GAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGKGAEGGGSS 123
PQ P P SP + PQ R R S+V + P G+ + G S
Sbjct: 1488 ALPQTPRPRSRSPSSP-ELNNKCLTPQ--RERSGSESSVDQKTVART-PLGQRSRSGSSQ 1543
Query: 124 SGNVSGVAPAAPAGGSRSSS 143
+V A+P S S S
Sbjct: 1544 ELDVK--PSASPQERSESDS 1561
Score = 32.3 bits (72), Expect = 3.0
Identities = 52/218 (23%), Positives = 77/218 (35%), Gaps = 45/218 (20%)
Query: 465 RSGAEG----KGVGRPPPAADALQSSGES---SPESAPGEGAALSLSSPD--APDRPPPR 515
RSG+E K V R P + S + P ++P E + S SSPD A R P R
Sbjct: 1516 RSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSE-SDSSPDSKAKTRTPLR 1574
Query: 516 HQDTGPCLEKTPAEGRDSPTREPGALPCACGQLPDLEDELSLLDPLPRYLKSCQDLIVPE 575
+ + ++ R SP R G P+++D+ PR Q
Sbjct: 1575 QRSRSGSSPEVDSKSRLSPRRSRS------GSSPEVKDK-------PRAAPRAQS----- 1616
Query: 576 QCRCADTRPGSEQPPLGGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADA 635
GS+ P A +P L S+ + GPSP
Sbjct: 1617 ---------GSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSS-----TESSPEHP 1662
Query: 636 PAEELQEKGSPAGPPPSQGQPAARPPKEVPASRLAQQL 673
P +GS + P P + +R P +SR + +L
Sbjct: 1663 PKSRTARRGSRSSPEP---KTKSRTPPRRRSSRSSPEL 1697
Score = 32.3 bits (72), Expect = 3.0
Identities = 26/131 (19%), Positives = 52/131 (39%), Gaps = 5/131 (3%)
Query: 20 KRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQ 79
+R++ S + + ++ SS + + G+ P P A + P +P++
Sbjct: 2530 RRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEA 2589
Query: 80 HHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGS 139
R +KR R+ S+ S ++ S + SSS + S + ++ + S
Sbjct: 2590 VREGRPPEPTPAKRKRRSSSSSSSSSSSSSS-----SSSSSSSSSSSSSSSSSSSSSSSS 2644
Query: 140 RSSSRNLGSSG 150
SSS + G
Sbjct: 2645 SSSSPSPAKPG 2655
Score = 32.0 bits (71), Expect = 3.9
Identities = 47/204 (23%), Positives = 74/204 (36%), Gaps = 11/204 (5%)
Query: 474 GRPPPAADALQSSGESSPESAPGEGAALSLSSPDAPDRPPPRHQDTGPCLEKTPAEGRDS 533
GR P A + G++ P S PG + SSP+ + P + +K + R S
Sbjct: 293 GRSPSPASGRRGEGDA-PFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPS 351
Query: 534 PTREPGAL-PCACGQLPDL-EDELSLLDPLPRYLKSCQDLIVP-EQCRCADTRPGSEQPP 590
P+ E + P P L E PL S + + P E D P
Sbjct: 352 PSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEK 411
Query: 591 LGGAASPEVLAP------VSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEELQEKG 644
L ++S E P VS+ A+ +P P P P PG ++ + + + ++
Sbjct: 412 LPQSSSSESSPPSPQPTKVSRHASS-SPESPKPAPAPGSHREISSSPTSKNRSHGRAKRD 470
Query: 645 SPAGPPPSQGQPAARPPKEVPASR 668
PS+ +R P R
Sbjct: 471 KSHSHTPSRRMGRSRSPATAKRGR 494
Score = 31.6 bits (70), Expect = 5.0
Identities = 88/357 (24%), Positives = 120/357 (33%), Gaps = 83/357 (23%)
Query: 484 QSSGESSPESAP------GEGAALSLSSP--DAPDRPPPRHQDTGPC-------LEKTPA 528
+SSG SS E +P G + S+SSP DA R P R + + L +TP+
Sbjct: 1377 RSSGHSSSELSPDAVEKAGMSSNQSISSPVLDAVPRTPSRERSSSASSPEMKDGLPRTPS 1436
Query: 529 E----GRDSPTREPGALPCA---CGQLPDLEDELSLLDPLPRYLKSCQDLIVPEQCRC-A 580
G R+ P G P ++D +PR P + R
Sbjct: 1437 RRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKD-------IPR---------TPSRGRSEC 1480
Query: 581 DTRPGSEQPPLGGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEEL 640
D+ P E L P +P S E + T R G +D K +A P +
Sbjct: 1481 DSSP--EPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVD--QKTVARTPLGQR 1536
Query: 641 QEKGSPAGPPPSQGQPAARPPKEVPASRLAQQLREEGWNLQTSESLTLAEVYLMMGKPSK 700
GS +P+A P Q R E + S++ T
Sbjct: 1537 SRSGSSQ---ELDVKPSASP-----------QERSESDSSPDSKAKTRT----------- 1571
Query: 701 LQLEYDWLGPGRQDPRPGSLPTALHKQRLLSCLLKLIST---EVNPKLALEANTISTASV 757
P RQ R GS P K RL + S+ + P+ A A + S +S
Sbjct: 1572 ---------PLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSP 1622
Query: 758 RPAQEEQSMTPPGKVVTVSS--RSPRCPRNQASLRSSKTFPPSSAPCSSGLRNPPRP 812
P P SS R P P +S SS PP S G R+ P P
Sbjct: 1623 EPKAPAPRALPRRSRSGSSSKGRGPS-PEGSSSTESSPEHPPKSRTARRGSRSSPEP 1678
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 55.5 bits (132), Expect = 3e-07
Identities = 170/662 (25%), Positives = 232/662 (35%), Gaps = 122/662 (18%)
Query: 470 GKGVGRPPPAADALQSSGESSPESAPGEGAALSLSSPDAPDRPPPRHQDTGPCLEKTPAE 529
G G PP AD + S G SSP P A +P PPP PA
Sbjct: 180 GPGGLFPPRLADPVPSGGSSSPRFLPRGNA-------PSPAPPPP------------PAI 220
Query: 530 GRDSPTREPGA------LPCACGQLPDLEDELSLLDPLPRYLKSCQDLIVPEQCRCADTR 583
++P+ GA +P G P S P L C D + P ++
Sbjct: 221 SLNAPSYNWGAALRSSLVPSDLGSPP--APHASSSPPSDPPLFHCSDALTPPPLPPSNNL 278
Query: 584 PG----SEQPPLGGAAS--PEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPA 637
P + QPP+ A P VL P+ APT P P L + + A A A
Sbjct: 279 PAHPGPASQPPVSSATMHLPLVLGPLGG-----APTVEGPGAPPFLASSLLS---AAAKA 330
Query: 638 EELQEKGSPAGPPPSQGQPAARPPKEVPASRLAQQLREEGWNLQTSESLTLAEVYLMMGK 697
+ P PPPS Q RP + P++ + LR Q L+ G+
Sbjct: 331 QH------PPLPPPSTLQ-GRRPRAQAPSASHSSSLRPS----QRRPRRPPTVFRLLEGR 379
Query: 698 PSKLQLEYDWLGPGRQDPRPGSLPTALHKQRLLSCLLKLISTEVNPKLALEANTISTASV 757
+ P P+P SLP Q +L +L L+ L + S S
Sbjct: 380 GPQTPRRSRPRAPA-PVPQPFSLPEP--SQPILPSVLSLLG------LPTPGPSHSDGSF 430
Query: 758 RPAQEEQSMTPPGKVVTVSSRSPRCPRN--QASLRSSKTFPPSSAPCSSGLRNPPRPLLV 815
+ + PP T+SS SP PR+ Q SL + + SS P G PP
Sbjct: 431 NLLGSDAHLPPP---PTLSSGSPPQPRHPIQPSLPGTTSGSLSSVP---GAPAPPAASKA 484
Query: 816 P-GPSSTGSNDSDG-GLFAVPTTLPPNSRHGKLFS-PSKEAELT-----FRQHLNSISMQ 867
P PS + S+G G+ A P P G+ F PS E L F L ++ +
Sbjct: 485 PVVPSPVLQSPSEGLGMGAGPACPLPPLAGGEAFPFPSPEQGLALSGAGFPGMLGALPLP 544
Query: 868 SDFFLPKPRKLRNRHLRKPLV------VQRTLLP---------RPSENQSHNVCSFSILS 912
P P L N L L LLP P E + ++ S+L
Sbjct: 545 LSLGQPPPSPLLNHSLFGVLTGGGGQPPPEPLLPPPGGPGPPLAPGEPEGPSLLVASLLP 604
Query: 913 NSSVTGRGSFRPIQSSLTKAALSRP--IVPKVLPPQATSHLASAIDLAATSAGILSGNPL 970
P S L + P ++ LP A A + +A AG SG P
Sbjct: 605 -----------PPPSDLLPPPSAPPSNLLASFLPLLALGPTAGDGEGSAEGAGGPSGEPF 653
Query: 971 PALDTEGLSGISPLSSDEVTGAISGQDSTGTHQDGDTLPTVGGSDPFVSIPSRPEQEPVA 1030
L PLS+ A++ TL G+ P + S P+ P
Sbjct: 654 SGLGDLSPLLFPPLSAPPTLIALNSALLAA------TLDPPSGTPPQPCVLSAPQPGPPT 707
Query: 1031 DSFQGSSV-LSLSELPKAPLQNG-----LSIPLSSS---ESSSTRLSPPDVSALLDISLP 1081
S ++ S L KAP +G LS L +S + SS SP + +LL P
Sbjct: 708 SSVTTATTDPGASSLGKAPSNSGRPPQLLSPLLGASLLGDLSSLTSSPGALPSLL--QPP 765
Query: 1082 GP 1083
GP
Sbjct: 766 GP 767
Score = 53.5 bits (127), Expect = 1e-06
Identities = 192/760 (25%), Positives = 258/760 (33%), Gaps = 170/760 (22%)
Query: 480 ADALQSSGESSPESAPGEGAALSL---SSPDAPD-RPPPRHQDTGPCLEKTPAEGRDSPT 535
A +S + S+PGEGA+ + SP P RPP R T TP G P
Sbjct: 111 ATLYRSMETTCSHSSPGEGASPQMFHTVSPGPPSARPPCRVPPT------TPLNG--GPG 162
Query: 536 REPGALPCACGQLPDLEDELSLLDPLPRYLKSCQDLIVPEQCRCADTRP--GSEQP---P 590
P P P L L P R AD P GS P P
Sbjct: 163 SLPPEPPSVSQAFPTLAGPGGLFPP-----------------RLADPVPSGGSSSPRFLP 205
Query: 591 LGGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEELQEKGSPAGPP 650
G A SP AP A L PS G L + DL PA P+ PP
Sbjct: 206 RGNAPSP---APPPPPAISL--NAPSYNWGAALRSSLVPSDLGSPPAPH-ASSSPPSDPP 259
Query: 651 PSQGQPAARPPKEVPASRLAQQLREEGWNLQTSESLTLAEVYLMMGKPSKLQLEYDWLGP 710
A PP P++ L G Q S + L++G LG
Sbjct: 260 LFHCSDALTPPPLPPSNNLP---AHPGPASQPPVSSATMHLPLVLGP----------LGG 306
Query: 711 GRQDPRPGSLPTALHKQRLLSCLLKLISTEVNPKLALEA--------NTISTASVRPAQE 762
PG+ P LLS K + P L+ + ++S+RP+Q
Sbjct: 307 APTVEGPGAPP--FLASSLLSAAAKAQHPPLPPPSTLQGRRPRAQAPSASHSSSLRPSQ- 363
Query: 763 EQSMTPPGKVVTVSSRSPRCPRNQASLRSSKTFPPSSAPCSSGLRNPPRPLL-------- 814
+ PP + R P+ PR S+ P+ P L P +P+L
Sbjct: 364 RRPRRPPTVFRLLEGRGPQTPRR------SRPRAPAPVPQPFSLPEPSQPILPSVLSLLG 417
Query: 815 --VPGPS-STGSND---SDGGLFAVPTT---LPPNSRHGKLFSPSKEAELTFRQHLNSIS 865
PGPS S GS + SD L PT PP RH PS S S
Sbjct: 418 LPTPGPSHSDGSFNLLGSDAHLPPPPTLSSGSPPQPRHP--IQPSLPG-------TTSGS 468
Query: 866 MQSDFFLPKPRKLRNRHLRKPLVVQRTLLPRPSENQSHN---VCSFSILSNSSVTGRGSF 922
+ S P P K VV +L PSE C L+ G
Sbjct: 469 LSSVPGAPAPPA-----ASKAPVVPSPVLQSPSEGLGMGAGPACPLPPLAG------GEA 517
Query: 923 RPIQSSLTKAALSRPIVPKVLPPQATSHLASAIDLAATSAGILSGNPLPALDTEGLSGIS 982
P S ALS A G+L PLP + G S
Sbjct: 518 FPFPSPEQGLALS----------------------GAGFPGMLGALPLPL--SLGQPPPS 553
Query: 983 PLSSDEVTGAISGQDSTGTHQDGDTLPTVGGSDPFVSIPSRPEQEPVADSFQGSSVLSLS 1042
PL + + G ++G G LP GG P ++ P PE G S+L S
Sbjct: 554 PLLNHSLFGVLTG--GGGQPPPEPLLPPPGGPGPPLA-PGEPE---------GPSLLVAS 601
Query: 1043 ELPKAPLQNGLSIPLSSSESSSTRLSPPDVSALLDISLPGPPEDALS-----QGEPATHI 1097
LP P +P S+ S+ S + AL + G E + GEP + +
Sbjct: 602 LLPPPPSD---LLPPPSAPPSNLLASFLPLLALGPTA--GDGEGSAEGAGGPSGEPFSGL 656
Query: 1098 SD--SIIEIAISSGQYGEGVPLSPAKLNGSDSSKSLPSPSSS-PQPHWIASPTHDPQWYP 1154
D ++ +S+ P + LN + + +L PS + PQP +++P P P
Sbjct: 657 GDLSPLLFPPLSA-------PPTLIALNSALLAATLDPPSGTPPQPCVLSAPQPGP---P 706
Query: 1155 SDSTDSSLSSLFASFISPEKSRKMLPTP-IGTNSGTSLLG 1193
+ S ++ + AS + S P + G SLLG
Sbjct: 707 TSSVTTATTDPGASSLGKAPSNSGRPPQLLSPLLGASLLG 746
Score = 33.1 bits (74), Expect = 1.7
Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 22/95 (23%)
Query: 52 PRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSG------ 105
P G GPP PG P+ PS L +S+ P PPSA S
Sbjct: 578 PPPGGPGPPLAPGEPEGPS-----------LLVASLLPPPPSDLLPPPSAPPSNLLASFL 626
Query: 106 ---NAGGSGPRGKG-AEGGGSSSGN-VSGVAPAAP 135
G + G+G AEG G SG SG+ +P
Sbjct: 627 PLLALGPTAGDGEGSAEGAGGPSGEPFSGLGDLSP 661
Score = 33.1 bits (74), Expect = 1.7
Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 29/122 (23%)
Query: 62 PPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGP-------RG 114
PP P+AP P SP S++ P+ RP P SA+ + P RG
Sbjct: 804 PPEQPEAPCLPPESP-------ASALEPEPARP---PLSALAPPHGSPDPPVPELLTGRG 853
Query: 115 KGAEG--GGSSSGNVSGVAPAAPAGGSRSSSR--------NLGSSGGEKEEGKKVRRQWE 164
G G GG ++G A PA G + SR G+ GG + ++ R+
Sbjct: 854 SGKRGRRGGGGLRGING--EARPARGRKPGSRREPGRLALKWGTRGGFNGQMERSPRRTH 911
Query: 165 SW 166
W
Sbjct: 912 HW 913
Score = 30.8 bits (68), Expect = 8.6
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 54 AGADGPPAPPGAP-QAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDP 98
A A PP PP + Q P +P H SS+RP +RPR+ P
Sbjct: 328 AKAQHPPLPPPSTLQGRRPRAQAPSASHS---SSLRPSQRRPRRPP 370
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 55.1 bits (131), Expect = 4e-07
Identities = 166/728 (22%), Positives = 238/728 (32%), Gaps = 111/728 (15%)
Query: 476 PPPAADALQSSGESSPESAPGEGAALSLSSPDAPDRPPPRHQDTGPCLEKTP-AEGRDSP 534
PPP A L E P S E LS ++P PPP P E +P + +SP
Sbjct: 460 PPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESP 519
Query: 535 TREPGALPCACGQLPDLEDELS---LLDPLPRYLKSCQDLIVPEQCRCADTRPGSEQPPL 591
P P + P LE LS PL + PE+ P S P
Sbjct: 520 LSPPEESPPS----PALETPLSPPPEASPLSPPFEESPLSPPPEEL------PTSPPPEA 569
Query: 592 GGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEELQEKGSPAGPPP 651
+ P +P+S + + SP P L + P EE SP PPP
Sbjct: 570 SRLSPPPEESPMSPPPEE---SPMSPPPEASRLFPPFEESPLSPPPEE-----SPLSPPP 621
Query: 652 S--------QGQPAARPPKEVPASRLAQQLREEGWNLQTSESLTLAEVYLM---MGKPSK 700
+ P + PP+E P S + R + + S E L P+
Sbjct: 622 EASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTS 681
Query: 701 LQLEYDWLGPGRQD----PRPGSLPTALHKQRLLSCLLKLISTEVNPKLALEANTISTAS 756
E L P +D P P P + + L L E +P L L
Sbjct: 682 PPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSL----PLEESPLLPLP----EEPQ 733
Query: 757 VRPAQEEQSMTPPGKVVTVSSRSPRCPRNQASLRSSKTFPPSSAPCSSGLRNPPR----- 811
+ P E ++P + +S R P P P PC + P
Sbjct: 734 LCPRSEGPHLSPRPEEPHLSPR-PEEPHLSPQAEEPHLSPQPEEPCLCAVPEEPHLSPQA 792
Query: 812 --PLLVPGPSS--TGSNDSDGGLFAVP--TTLPPNSRHGKLFSPSKEAELTFRQHLNSIS 865
P L P P + L VP L P L S+E L+ R + +S
Sbjct: 793 EGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESHLSPQSEEPCLSPRPEESHLS 852
Query: 866 --MQSDFFLPKPRKLRNRHLRKPLVVQRTLLPRPSENQSHNVCSFSILSNSSVTGRGSFR 923
++ P+P K + P + L P P E + LS G
Sbjct: 853 PELEKPPLSPRPEKPPEEPGQCPAPEELPLFPPPGEPSLSPLLGEPALSE---PGEPPLS 909
Query: 924 PIQSSLTKAALSRP-IVPKVLPPQATSHLASAIDLAATSAGILSGNPLPALDTE-GLSG- 980
P+ L + P + P+++PP S I AA + +PL L+ G G
Sbjct: 910 PLPEELPLSPSGEPSLSPQLMPPDPLPPPLSPIITAAAPPAL---SPLGELEYPFGAKGD 966
Query: 981 ---ISPLSSDEVTGAISGQDSTGTHQDGDTLP----------TVGGSDPFVSIPSRPEQE 1027
SPL++ + IS D + +P VG + P + P P+
Sbjct: 967 SDPESPLAAPILETPISPPPEANC-TDPEPVPPMILPPSPGSPVGPASPILMEPLPPQCS 1025
Query: 1028 PVADS--FQGSSVLSLSELPKAPLQ-----------NGLSIPLSSSESSSTRLSPPDVSA 1074
P+ +S S P PL G+S E + ++S P+ A
Sbjct: 1026 PLLQHSLVPQNSPPSQCSPPALPLSVPSPLSPIGKVVGVSDEAELHEMETEKVSEPECPA 1085
Query: 1075 L---LDISLPGPPED-ALSQGEPATHISDSIIEIAISSGQYGEGVPLSPAKLNGSDSSKS 1130
L LP P D + PA + D G+ A L+G D+ S
Sbjct: 1086 LEPSATSPLPSPMGDLSCPAPSPAPALDDF------------SGLGEDTAPLDGIDAPGS 1133
Query: 1131 LPSPSSSP 1138
P P +P
Sbjct: 1134 QPEPGQTP 1141
Score = 54.3 bits (129), Expect = 7e-07
Identities = 154/640 (24%), Positives = 216/640 (33%), Gaps = 173/640 (27%)
Query: 517 QDTGPCLEKTPAEGRDSPTREPGALPCACGQLPDLEDELSLLDPLPRYLKSCQDLIVPEQ 576
Q T C +P E D+PT EP AL AC P S+ P P Q
Sbjct: 364 QHTPVCSRFSPPEPGDTPTDEPDALYVACQGQPKGGHVTSMQPKEPG----------PLQ 413
Query: 577 CRCADTRPGSEQPPLGGAA---SPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTKDLA 633
C E PLG A P++ AP+++E L P SP L+
Sbjct: 414 C---------EAKPLGKAGVQLEPQLEAPLNEEMPLLPPPEESP--------------LS 450
Query: 634 DAPAEELQEKGSPAGPPPSQGQPAARPPKEVPASRLAQQLREEGWNLQTSESLTLAEVYL 693
P E SP PPP + + PP+E+PAS L + L
Sbjct: 451 PPPEE------SPTSPPP-EASRLSPPPEELPASPLPEALH------------------- 484
Query: 694 MMGKPSKLQLEYDWLGPGRQD----PRPGSLPTALHKQRLLSCLLKLISTEVNPKLALEA 749
+ +P LE L P ++ P P S P + ++ LS E P ALE
Sbjct: 485 -LSRP----LEESPLSPPPEESPLSPPPESSPFSPLEESPLS-----PPEESPPSPALE- 533
Query: 750 NTISTASVRPAQEEQSMTPPGKVVTVSSRSPRCPRNQASLRSSKTFPPSSAPCSSGLRNP 809
+ P E ++PP SP P + P S P +S L P
Sbjct: 534 -----TPLSPPPEASPLSPP------FEESPLSP-------PPEELPTSPPPEASRLSPP 575
Query: 810 PRPLLVPGPSSTGSNDSDGGLFAVPTTLPPNSRHGKLFSPSKEAELTFRQHLNSISMQSD 869
P P S +S P + PP + +LF P +E+ L+ + +S
Sbjct: 576 PE----ESPMSPPPEES-------PMSPPPEA--SRLFPPFEESPLSPPPEESPLS---- 618
Query: 870 FFLPKPRKLRNRHLRKPLVVQRTLLPRPSENQSHNVCSFSILSNSSVTGRGSFRPIQSSL 929
P P R P + P P E+ S LS V R S P +S L
Sbjct: 619 ---PPPEASR----LSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPL 671
Query: 930 TKAALSRPIVPKVLPPQATSHLASAIDLAATSAGILSGNPLPALDTEGLSGISPLSSDEV 989
+ P P PP+A S +SP D
Sbjct: 672 SPPPEESPTSP---PPEA-------------------------------SRLSPPPEDSP 697
Query: 990 TGAISGQDSTGTHQDGDTLPTVG-GSDPFVSIPSRPEQEPVADSFQGSSVLSLSELPKAP 1048
T +DS + D+L ++ P + +P P+ P ++ LS P+ P
Sbjct: 698 TSP-PPEDSPASPPPEDSLMSLPLEESPLLPLPEEPQLCPRSEG------PHLSPRPEEP 750
Query: 1049 -LQNGLSIPLSSSESSSTRLSP-PDVSALLDISLPGPPEDALSQGEPATHISDSIIEIAI 1106
L P S ++ LSP P+ L + P E LS H+S E+ +
Sbjct: 751 HLSPRPEEPHLSPQAEEPHLSPQPEEPCLCAV----PEEPHLSPQAEGPHLSPQPEELHL 806
Query: 1107 S---SGQYGEGVPLSPAKLNGSDSSKSLP---SPSSSPQP 1140
S + VP P + S P P SP+P
Sbjct: 807 SPQTEEPHLSPVPEEPCLSPQPEESHLSPQSEEPCLSPRP 846
Score = 52.0 bits (123), Expect = 4e-06
Identities = 188/784 (23%), Positives = 259/784 (33%), Gaps = 160/784 (20%)
Query: 476 PPPAADALQSSGESSPESAPGEGAALSLSSPDAPDRPPPRH------------------- 516
PPP L E SP S P E + LS D+P PPP
Sbjct: 664 PPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEES 723
Query: 517 -------------QDTGPCLEKTPAEGRDSPTREPGAL---------------PCACGQL 548
+ GP L P E SP E L PC C +
Sbjct: 724 PLLPLPEEPQLCPRSEGPHLSPRPEEPHLSPRPEEPHLSPQAEEPHLSPQPEEPCLCA-V 782
Query: 549 PDLEDELSLLDPLPRYLKSCQDLIVPEQCRCADTRPGSEQPPLGGAASPEVLAPVSKEAA 608
P+ E LS P ++L + Q P E+P L L+P S+E
Sbjct: 783 PE-EPHLSPQAEGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESHLSPQSEEPC 841
Query: 609 DLAPTGPSPRPGPGLLLDVCTK-DLADAPAEELQEKGS-------PAGPPPSQ------- 653
SPRP L K L+ P + +E G P PPP +
Sbjct: 842 ------LSPRPEESHLSPELEKPPLSPRPEKPPEEPGQCPAPEELPLFPPPGEPSLSPLL 895
Query: 654 GQPAARPPKEVPASRLAQQLREEGWNLQTSESLTLAEVYLMMGKPSKLQLEYDWLGPGRQ 713
G+PA P E P S L ++L L S G+PS L + P
Sbjct: 896 GEPALSEPGEPPLSPLPEEL-----PLSPS------------GEPS---LSPQLMPPDPL 935
Query: 714 DPRPGSLPTALHKQRLLSCLLKL-----ISTEVNPKLALEANTISTASVRPAQEEQSMTP 768
P + TA LS L +L + +P+ L A + T + P E P
Sbjct: 936 PPPLSPIITAA-APPALSPLGELEYPFGAKGDSDPESPLAAPILET-PISPPPEANCTDP 993
Query: 769 PGKVVTVSSRSPRCPRNQASLRSSKTFPPSSAPCSSGLRNPPRPLLVPGPSSTGSNDSDG 828
+ SP P AS + PP CS PLL S S
Sbjct: 994 EPVPPMILPPSPGSPVGPASPILMEPLPPQ---CS--------PLLQHSLVPQNSPPSQC 1042
Query: 829 GLFAVPTTLP-PNSRHGKLFSPSKEAELTFRQHLNSISMQSDFFLPKPRKLRNRHLRKPL 887
A+P ++P P S GK+ S EAEL H S+ P L P+
Sbjct: 1043 SPPALPLSVPSPLSPIGKVVGVSDEAEL----HEMETEKVSEPECPALEPSATSPLPSPM 1098
Query: 888 VVQRTLLPRPSENQSHNVCSFSILSNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPPQA 947
L P+ + + + FS L + G A S+P P Q
Sbjct: 1099 ----GDLSCPAPSPAPALDDFSGLGEDTAPLDG---------IDAPGSQP-----EPGQT 1140
Query: 948 TSHLASAIDLAATSAGILSGNPLPALDTEGLSGISPLSSDEVTGAISGQDSTGTHQD--- 1004
LAS L G+P+ LD E L+ ++P+ +GQ S Q+
Sbjct: 1141 PGSLASE----------LKGSPV-LLDPEELAPVTPMEVYPECKQTAGQGSPCEEQEEPR 1189
Query: 1005 ---GDTLPTVGGSDPFVSIPSRPEQEPVADSFQGSSVLSLSELPKA----PLQNGLSIPL 1057
T PT+ SD V+ S Q + SF GS L S P+ ++ G+S +
Sbjct: 1190 APVAPTPPTLIKSD-IVNEISNLSQGDASASFPGSEPLLGSPDPEGGGSLSMELGVSTDV 1248
Query: 1058 SSSESSSTRLSPPDVSALLDISLPGPPEDALS----QGEPATHISD---SIIEIAISSGQ 1110
S + + D D SL A+S +GE S S I+ SS
Sbjct: 1249 SPARDEGSLRLCTDSLPETDDSLLCDAGTAISGGKAEGEKGRRRSSPARSRIKQGRSSSF 1308
Query: 1111 YGEGVPLSPAKLNGSDSSKSLPSPSSSPQPHWIASPTHDPQWYPSDSTDSSLSSLFASFI 1170
G P A L S +SS + +A P + D ++ + F
Sbjct: 1309 PGRRRPRGGAHGGRGRGRARLKSTASSIETLVVADIDSSPSKEEEEEDDDTMQNTVVLFS 1368
Query: 1171 SPEK 1174
+ +K
Sbjct: 1369 NTDK 1372
Score = 50.1 bits (118), Expect = 1e-05
Identities = 179/817 (21%), Positives = 263/817 (32%), Gaps = 142/817 (17%)
Query: 450 IQSGQGTARGQVKCPRSGAEGKGVGRPPPAADALQSSGESSPESAPGEGAALSLSSPDAP 509
+ S Q G ++C GV P L E P P E + LS ++P
Sbjct: 401 VTSMQPKEPGPLQCEAKPLGKAGVQLEPQLEAPLN---EEMPLLPPPEESPLSPPPEESP 457
Query: 510 DRPPPRHQDTGPCLEKTPAEGRDSPTREPGALPCACGQLPDLEDELSLLDPLPRYLKSCQ 569
PPP P E+ PA SP L + L L PL
Sbjct: 458 TSPPPEASRLSPPPEELPA----SP----------------LPEALHLSRPLEE------ 491
Query: 570 DLIVPEQCRCADTRPGSEQPPLGGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCT 629
+ P E+ PL +P+ E + L+P SP P P L +
Sbjct: 492 ----------SPLSPPPEESPLSPPPESSPFSPL--EESPLSPPEESP-PSPALETPLSP 538
Query: 630 KDLADAPAEELQEKGSPAGPPPSQGQPAARPPKEVPASRLAQQLREEGWNLQTSESLTLA 689
A + +E SP PPP + P + PP+ ASRL+ E + ES
Sbjct: 539 PPEASPLSPPFEE--SPLSPPPEE-LPTSPPPE---ASRLSPPPEESPMSPPPEES---- 588
Query: 690 EVYLMMGKPSKLQLEYDWLGPGRQDPRPGSLPTALHKQRLLSCLLKLISTEVNPKLALEA 749
M P + + P P P + P+ + +
Sbjct: 589 ----PMSPPPEASRLFPPFEESPLSPPPEESPLS-----------------PPPEASRLS 627
Query: 750 NTISTASVRPAQEEQSMTPPGKV-----VTVSSRSPRCPRNQASLRSSKTFPPSSAPCSS 804
+ + P EE M+PP +V + V SR P + P S P +S
Sbjct: 628 PPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEAS 687
Query: 805 GLRNPPR--PLLVPGPSSTGSNDSDGGLFAVPTTLPPNSRHGKLFSPSKEAELTFRQHLN 862
L PP P P S S + L ++P P L +E +L R
Sbjct: 688 RLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEESP------LLPLPEEPQLCPRSEGP 741
Query: 863 SISMQSD--FFLPKPRKLRNRHLRKPLVVQRTLLPRPSENQSHNVCSFSILSNSSVTGRG 920
+S + + P+P + HL P + L P+P E V LS +
Sbjct: 742 HLSPRPEEPHLSPRPEE---PHL-SPQAEEPHLSPQPEEPCLCAVPEEPHLSPQAEGPHL 797
Query: 921 SFRPIQSSLTKAALSR-----PIVPKVLPPQATSHLASAIDLAATSAGILSGNPLPALDT 975
S +P + L+ P P + P SHL+ + S + P L+
Sbjct: 798 SPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESHLSPQSEEPCLSPRPEESHLSPELEK 857
Query: 976 EGLSGISPLSSDEVTGAISGQDSTGTHQDGDTLPTVGGSDPFVSIPSRPEQEPVADSFQG 1035
LS P E G + P P P P+ G
Sbjct: 858 PPLSP-RPEKPPEEPGQCPAPEEL----------------PLFPPPGEPSLSPLL----G 896
Query: 1036 SSVLS-LSELPKAPLQNGLSIPLSSSESSSTRLSPPDVSALLDISLPGPPEDALSQGEPA 1094
LS E P +PL L + S S S +L PPD LP P ++ P
Sbjct: 897 EPALSEPGEPPLSPLPEELPLSPSGEPSLSPQLMPPD-------PLPPPLSPIITAAAPP 949
Query: 1095 THISDSIIEIAISSGQYGEGVPLSPAKLNGSDSSKSLPSPSSSPQPHWIASPTHDPQWYP 1154
+ E+ G G+ P SP ++ L +P S P P P
Sbjct: 950 A--LSPLGELEYPFGAKGDSDPESPL------AAPILETPISPPPEANCTDPEPVPPMIL 1001
Query: 1155 SDSTDSSL---SSLFASFISPEKSRKMLPTPIGTNSGTSLLGPSLLDGNSRDSFVSRSLA 1211
S S + S + + P+ S + + + NS S P L + V L+
Sbjct: 1002 PPSPGSPVGPASPILMEPLPPQCSPLLQHSLVPQNSPPSQCSPPALPLS-----VPSPLS 1056
Query: 1212 DVAEVVDSQLVCMMNENSIDYISRFNDLAQELSIAEP 1248
+ +VV ++E + +S A E S P
Sbjct: 1057 PIGKVVGVSDEAELHEMETEKVSEPECPALEPSATSP 1093
Score = 35.8 bits (81), Expect = 0.27
Identities = 36/145 (24%), Positives = 53/145 (36%), Gaps = 8/145 (5%)
Query: 1014 SDPFVSIPSRPEQEPVADSFQGSSVLSLSELPKAPLQNGLSIPLSSSESSSTRLSPPDVS 1073
SDPF +P+ P+ + + S LS +P+ P S S S +
Sbjct: 2405 SDPFSRVPASPQSQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRPPSRPQSRDPFA 2464
Query: 1074 ALLDISLPGPPEDALSQGEPA-THISDSIIEIAISSGQYGE-------GVPLSPAKLNGS 1125
L P PPE A G A T + A+ +G GE G P + + G+
Sbjct: 2465 PLHKPPRPQPPEVAFKAGSLAHTSLGAGGFPAALPAGPAGELHAKVPSGQPPNFVRSPGT 2524
Query: 1126 DSSKSLPSPSSSPQPHWIASPTHDP 1150
+ PSP P + P+ P
Sbjct: 2525 GAFVGTPSPMRFTFPQAVGEPSLKP 2549
Score = 31.6 bits (70), Expect = 5.0
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 13/73 (17%)
Query: 602 PVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEELQEKGSP------AGPPPSQGQ 655
P + + +P PSP P T+ L + P E L E P + P ++ +
Sbjct: 4910 PPEEPSPPPSPLAPSPASPP-------TEPLVELPTEPLAEPPVPSPLPLASSPESARPK 4962
Query: 656 PAARPPKEVPASR 668
P ARPP+E SR
Sbjct: 4963 PRARPPEEGEDSR 4975
Score = 31.2 bits (69), Expect = 6.6
Identities = 57/232 (24%), Positives = 78/232 (33%), Gaps = 55/232 (23%)
Query: 457 ARGQVKCPRSGAEGKG--VGRPPPAADALQSSGESSPESAPGEGAALSLSSPDAPDRPPP 514
+RGQ P +G + K VG PP S S P PG S S D RPPP
Sbjct: 2733 SRGQT--PFAGTQDKSSLVGLPP--------SKLSGPILGPG-----SFPSDDRLSRPPP 2777
Query: 515 RHQDTGPCLEKTPAEGRDSPTRE----PGALPCACGQLPDLEDELSLLDPLPRYLKSCQD 570
+ + G + PG+LP Q + + + R+ S +
Sbjct: 2778 PATPSSMDVNSRQLVGGSQAFYQRAPYPGSLPLQQQQQQLWQQQQATAATSMRFAMSARF 2837
Query: 571 LIVPEQCRCADTRPGSEQPPLGGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTK 630
P + P LG A LA +S P P PGP
Sbjct: 2838 -------------PSTPGPELGRQALGSPLAGISTRL----PGPGEPVPGPA-------- 2872
Query: 631 DLADAPAEELQ-----EKGSPAGPPPSQGQPAARPPKEVPASRLAQQLREEG 677
PA+ ++ +KG G P GQ + P+ P S +L EG
Sbjct: 2873 ----GPAQFIELRHNVQKGLGPGGTPFPGQGPPQRPRFYPVSEDPHRLAPEG 2920
>gi|167736355 mucin 4 isoform a [Homo sapiens]
Length = 5284
Score = 52.8 bits (125), Expect = 2e-06
Identities = 110/502 (21%), Positives = 169/502 (33%), Gaps = 68/502 (13%)
Query: 743 PKLALEANTISTASVRPAQEEQSMTPPGKVVTVSSRSPR--CPRNQASLRSSKTFPP--- 797
P+ E+ T T SV P + +++T PG T S SP P++ ++ ++ TF P
Sbjct: 643 PQTTQESQT--TRSVSPMTDTKTVTTPGSSFTASGHSPSEIVPQDAPTISAATTFAPAPT 700
Query: 798 -----SSAPCSSGLRNPPRPLLVPGPSSTGSNDSDGGL-FAVPTTLPPNSRHGK------ 845
+ AP ++ P GPS S G L A P G+
Sbjct: 701 GDGHTTQAPTTALQAAPSSHDATLGPSGGTSLSKTGALTLANSVVSTPGGPEGQWTSASA 760
Query: 846 LFSPSKEAELTFRQHLNSISMQSDFFLPKPRKLRNRHLRKPLVVQRTLLPRPSENQSHNV 905
SP A +T S +P +R T P S
Sbjct: 761 STSPDTAAAMTHTHQAESTEASGQTQTSEPASSGSR-----TTSAGTATPSSSGASGTTP 815
Query: 906 CSFSILSNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPPQATSHLASAIDLAATSAGIL 965
+S S T R S P + S T + + L + SH A + S+ I+
Sbjct: 816 SGSEGISTSGETTRFSSNPSRDSHTTQSTTE------LLSASASHGAIPVSTGMASS-IV 868
Query: 966 SGNPLPALDTEGLSG--------ISPLSSDEVTGAISGQ---DSTGTHQDGDTLPTVG-G 1013
G P L +G SP +S + T AIS T T + DT+
Sbjct: 869 PGTFHPTLSEASTAGRPTGQSSPTSPSASPQETAAISRMAQTQRTRTSRGSDTISLASQA 928
Query: 1014 SDPFVSIPSRPEQ-------EPVADSFQGSSVLSLSELPKAPLQNGLSIPLSSSESSSTR 1066
+D F ++P P P ++ S S A + N +P++ + S+ST
Sbjct: 929 TDTFSTVPPTPPSITSTGLTSPQTETHTLSPSGSGKTFTTALISNATPLPVTYASSASTG 988
Query: 1067 LSPP-------DVSALLDISLPGPPEDALSQGE----PATHISDS-------IIEIAISS 1108
+ P VS LP ++S G P T S + + SS
Sbjct: 989 HTTPLHVTDASSVSTGHATPLPVTSPSSVSTGHTTPLPVTDTSSESTGHVTPLPVTSFSS 1048
Query: 1109 GQYGEGVPLSPAKLNGSDSSKSLPSPSSSPQPHWIASPTHDPQWYPSDSTDSSLSSLFAS 1168
G+ PL + + + P P +S T P S ++ +SL +
Sbjct: 1049 ASTGDSTPLPVTDTSSASTGHVTPLPVTSLSSASTGDTTPLPVTDTSSASTGHATSLPVT 1108
Query: 1169 FISPEKSRKMLPTPIGTNSGTS 1190
S + P P+ S S
Sbjct: 1109 DTSSVSTGHTTPLPVTDTSSAS 1130
Score = 42.4 bits (98), Expect = 0.003
Identities = 103/468 (22%), Positives = 158/468 (33%), Gaps = 55/468 (11%)
Query: 753 STASVRPAQEEQSMTPPGKVVT-----VSSRSPRCPRNQASLRSSKTFPPSSAPCSSGLR 807
ST P E +++P G T +S+ +P +S + T P SS
Sbjct: 944 STGLTSPQTETHTLSPSGSGKTFTTALISNATPLPVTYASSASTGHTTPLHVTDASSVST 1003
Query: 808 NPPRPLLVPGPSSTGSNDSDGGLFAVPTTLPPNSRHGKL-------FSPSKEAELTFRQH 860
PL V PSS S G +P T + G + FS + + T
Sbjct: 1004 GHATPLPVTSPSSV----STGHTTPLPVTDTSSESTGHVTPLPVTSFSSASTGDSTPLPV 1059
Query: 861 LNSISMQSDFFLPKPRKLRNRHLRKPLVVQRTLLP--RPSENQSHNVCSFSILSNSSV-T 917
++ S + P P L T LP S + + S + SSV T
Sbjct: 1060 TDTSSASTGHVTPLPVT----SLSSASTGDTTPLPVTDTSSASTGHATSLPVTDTSSVST 1115
Query: 918 GRGSFRPI---QSSLTKAALSRPIVPKVLPPQATSHLASAIDLAATSAGILSGNPLPAL- 973
G + P+ S+ T A S P+ +T H A+SA PLP
Sbjct: 1116 GHTTPLPVTDTSSASTGHATSLPVTDT--SSVSTGHTTPLHVTDASSASTGQATPLPVTS 1173
Query: 974 -------DTEGLSGISPLSSD--EVTGAISGQDSTGTHQDGDTLPTVGGSDPFVS-IPSR 1023
DT L SP S+ T + S+ + LP S S
Sbjct: 1174 LSSVSTGDTTPLPVTSPSSASTGHATPLLVTDTSSASTGHATPLPVTDASSVSTDHATSL 1233
Query: 1024 PEQEPVADSFQGSSVLSLSELPKAPLQNGLSIPLSSSESSSTRLSPPDVSALLDISLPGP 1083
P P A S ++ L +++ A S+ ++ + S ST + P LP
Sbjct: 1234 PVTIPSAASTGHTTPLPVTDTSSASTGQATSLLVTDTSSVSTGDTTP---------LPVT 1284
Query: 1084 PEDALSQGEPAT-HISDSIIEIAISSGQYGEGVPLSPAKLNGSDSSKSLPSPSSSPQPHW 1142
+ S G H++ SS G PL L+ + + ++P P +SP
Sbjct: 1285 STSSASTGHVTPLHVTSP------SSASTGHATPLPVTSLSSASTGDTMPLPVTSPSSAS 1338
Query: 1143 IASPTHDPQWYPSDSTDSSLSSLFASFISPEKSRKMLPTPIGTNSGTS 1190
T P S + + L + S + + P P+ + S S
Sbjct: 1339 TGDTTPLPVTDASSVSTGHTTPLHVTDASSASTGQATPLPVTSLSSVS 1386
Score = 42.4 bits (98), Expect = 0.003
Identities = 104/464 (22%), Positives = 167/464 (35%), Gaps = 53/464 (11%)
Query: 743 PKLALEANTISTASVRP------AQEEQSMTPPGKVVTVSSRS-----PRCPRNQASLRS 791
P L +A+++ST P + T P V SS S P + +S+ +
Sbjct: 3632 PLLVTDASSVSTGHATPLPVTDASSASTGDTTPLPVTDTSSASTGQATPLPVTSLSSVST 3691
Query: 792 SKTFPPSSAPCSSGLRNPPRPLLVPGPSSTGSNDSDGGLFAVPTTLPPNSRHGKLFSPSK 851
T P SS PL V PSS + D+ +P T P ++ G +
Sbjct: 3692 GDTTPLPVTDASSASTGHATPLPVTIPSSVSTGDT----MPLPVTSPSSASTGH----AT 3743
Query: 852 EAELTFRQHLNSISMQSDFFLP--KPRKLRNRHLRKPLVVQRTLLPRPSENQSHNVCSFS 909
+T L+S S LP RH PL V T + V S
Sbjct: 3744 PLPVT---GLSSASTGDTTPLPVTDTSSASTRHAT-PLPVTDTSSASTDDTTRLPVTDVS 3799
Query: 910 ILSNSSVTGRGSFRPIQS-SLTKAALSRPIVPKVLPPQATSHLASAIDLAATSAGILSGN 968
S+ TG + P+ S S + P+ +T H S + +SA
Sbjct: 3800 ----SASTGHATPLPVTSTSSASTGDTTPLPVTDTSSVSTGHATSLPVTSRSSASTGHAT 3855
Query: 969 PLPALDTEGLSG--ISPLSSDEVTGAISGQDSTGTHQDGDTLPTVGGSDPFVSIPSRPEQ 1026
PLP DT +S +PL T ++S +T + + G + P
Sbjct: 3856 PLPVTDTSSVSTGHATPLPVTS-TSSVSTGHATPLPVTSPSSASTGHATPV--------- 3905
Query: 1027 EPVADSFQGSSVLSLSELPKAPLQNGLSIPLSSSESSSTRLSPPDVSALLDISLPGPPED 1086
PV + S S + P+ N S LS+ ++ ++ P ++ D S P D
Sbjct: 3906 -PVTST----SSASTGDTTPLPVTNASS--LSTGHATPLHVTSPSSASRGDTSTL-PVTD 3957
Query: 1087 ALSQGEPATHISDSIIEIAISSGQYGEGVPLSPAKLNGSDSSKSLPSPSSSPQPHWIASP 1146
A S +T + + ++SS G+ PL + + + ++ P P +S
Sbjct: 3958 ASSA---STGHATPLPLTSLSSVSTGDTTPLPVTDTSSASTGQATPLPVTSLSSVSTGDT 4014
Query: 1147 THDPQWYPSDSTDSSLSSLFASFISPEKSRKMLPTPIGTNSGTS 1190
T P PS ++ +SL + S + P P+ + S S
Sbjct: 4015 TPLPVTIPSSASSGHTTSLPVTDASSVSTGHGTPLPVTSTSSAS 4058
Score = 42.0 bits (97), Expect = 0.004
Identities = 108/531 (20%), Positives = 184/531 (34%), Gaps = 89/531 (16%)
Query: 742 NPKLALEANTISTASVRPAQEEQSMTPPGKVVTVSSRS-PRCPRNQASLRSSKTFPPSSA 800
+P L +A++ ST P +T V T + P + AS + P +
Sbjct: 1743 SPLLVTDASSASTGQATPLP----VTDTSSVSTAHATPLPVTGLSSASTDDTTRLPVTDV 1798
Query: 801 PCSSGLRNPPRPLLVPGPSSTG----------SNDSDGGLFAVPTTLPPNSRHGKLFS-P 849
+S + P P+ P +STG S+ S G ++P T+P ++ G S P
Sbjct: 1799 SSASTGQAIPLPVTSPSSASTGDTTPLPVTDASSASTGDTTSLPVTIPSSASSGHTTSLP 1858
Query: 850 SKEAELTFRQHLNSI------SMQSDFFLPKP---------------------------- 875
+A H S+ S+ + P P
Sbjct: 1859 VTDASSVSTGHATSLLVTDASSVSTGDTTPLPVTDTNSASTGDTTPLHVTDASSVSTGHA 1918
Query: 876 RKLRNRHLRKPLVVQRTLLP--RPSENQSHNVCSFSILSNSSV-TGRGSFRPI-QSSLTK 931
L L T LP PS S + + SSV TG + P+ +S
Sbjct: 1919 TSLPVTSLSSASTGDTTPLPVTSPSSASSGHTTPLPVTDASSVPTGHATSLPVTDASSVS 1978
Query: 932 AALSRPIVPKVLPPQATSHLAS--AIDLAATSAGILSGNPLPALDTEGLSGISPLSSDEV 989
+ P+ +T H D ++ S G + P+ +L + +PL +
Sbjct: 1979 TGHATPLPVTDASSVSTGHATPLPVTDTSSVSTGQATPLPVTSLSSASTGDTTPLPVTDT 2038
Query: 990 TGAISGQD------STGTHQDGDTLP---------TVGGSDPFVSIPSRPEQEPVADSFQ 1034
+ A +GQD S + GDT P + G + P + + A S
Sbjct: 2039 SSASTGQDTPLPVTSLSSVSTGDTTPLPVTSPSSASTGHATPLLVTDASSVSTGHATSLL 2098
Query: 1035 GSSVLSLSELPKAPLQNGLSIPLSSSESSSTRLSPPDVSALLDIS-LPGPPEDALSQGE- 1092
+ S+S L + LS+ +++ ++ P ++ D + LP ++S G
Sbjct: 2099 VTDASSVSTGHATALHVTDASSLSTGDTTPLPVTSPSSASTGDTTPLPVTDTSSVSTGHA 2158
Query: 1093 ---PATHISD-------SIIEIAISSGQYGEGVPLSPAKLNGSDSSKSLPSPSSSPQPHW 1142
P T S S+ SS G PL + + + ++ P P +SP
Sbjct: 2159 TSLPVTDTSSASTGHATSLPVTDTSSASTGHATPLPVTDTSSASTGQATPLPVTSPSS-- 2216
Query: 1143 IASPTHDPQWYPSDSTDSS---LSSLFASFISPEKSRKMLPTPIGTNSGTS 1190
AS H +D++ +S + L + +S + P P+ S S
Sbjct: 2217 -ASTGHAIPLLVTDTSSASTGQATPLPVTSLSSASTGDTTPLPVTDASSVS 2266
Score = 40.8 bits (94), Expect = 0.008
Identities = 57/266 (21%), Positives = 98/266 (36%), Gaps = 39/266 (14%)
Query: 947 ATSHLASAIDLAATSAGILSGNPLPALDTEGLS--GISPLSSDEVTGAISGQ------DS 998
+T H S + A+S PLP DT S +PL + + +G S
Sbjct: 1866 STGHATSLLVTDASSVSTGDTTPLPVTDTNSASTGDTTPLHVTDASSVSTGHATSLPVTS 1925
Query: 999 TGTHQDGDTLPTVGGSDPFVSIPSRPEQEPVADSFQGSSVLSLSELPKAPLQNGLSIPLS 1058
+ GDT P P P + S ++ L +++ P + S+P++
Sbjct: 1926 LSSASTGDTTPL-------------PVTSPSSASSGHTTPLPVTDASSVPTGHATSLPVT 1972
Query: 1059 SSESSSTRLSPP-------DVSALLDISLPGPPEDALSQGEPATHISDSIIEIAISSGQY 1111
+ S ST + P VS LP ++S G+ + + ++SS
Sbjct: 1973 DASSVSTGHATPLPVTDASSVSTGHATPLPVTDTSSVSTGQ-----ATPLPVTSLSSAST 2027
Query: 1112 GEGVPLSPAKLNGSDSSKSLPSPSSSPQPHWIASPTHDPQWYPSDSTDSSLSSLF---AS 1168
G+ PL + + + + P P +S T P PS ++ + L AS
Sbjct: 2028 GDTTPLPVTDTSSASTGQDTPLPVTSLSSVSTGDTTPLPVTSPSSASTGHATPLLVTDAS 2087
Query: 1169 FISPEKSRKMLPT---PIGTNSGTSL 1191
+S + +L T + T T+L
Sbjct: 2088 SVSTGHATSLLVTDASSVSTGHATAL 2113
Score = 40.4 bits (93), Expect = 0.011
Identities = 59/291 (20%), Positives = 112/291 (38%), Gaps = 26/291 (8%)
Query: 912 SNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPPQATSHLASAIDLAATS-AGILSGNPL 970
++S+ TG + P+ + + + +P A++ A+ + + TS A I L
Sbjct: 2822 TSSASTGHATSLPVTDTSSASTGHATPLPDTDTSSASTGHATLLPVTDTSSASIGHATSL 2881
Query: 971 PALDTEGLSG--ISPLSSDEVTGAISGQDSTGTHQDGDTLPTVGGSDPFVSIPSRPEQE- 1027
P DT +S +PL + A +G + D + T + V+ PS
Sbjct: 2882 PVTDTSSISTGHATPLHVTSPSSASTGHATPLPVTDTSSASTGHANPLHVTSPSSASTGH 2941
Query: 1028 ----PVADSFQGSS----VLSLSELPKAPLQNGLSIPLSSSESSSTRLSPPDVSALLDIS 1079
PV D+ S+ L ++ L + +P++S S+ST + P
Sbjct: 2942 ATPLPVTDTSSASTGHATPLPVTSLSSVSTGDTTPLPVTSPSSASTGHTTP--------- 2992
Query: 1080 LPGPPEDALSQGEPATHISDSIIEIAISSGQYGEGVPLSPAKLNGSDSSKSLPSPSSSPQ 1139
LP + S G+ + ++ + SS G+ PL + + + ++ P P +S
Sbjct: 2993 LPVTDTSSASTGQ-----ATALPVTSTSSASTGDTTPLPVTDTSSASTGQATPLPVTSLS 3047
Query: 1140 PHWIASPTHDPQWYPSDSTDSSLSSLFASFISPEKSRKMLPTPIGTNSGTS 1190
T P PS ++ + L + S + + P P+ + S S
Sbjct: 3048 SVSTGDTTPLPVTSPSSASTGHATPLLVTDASSASTGQATPLPVTSLSSVS 3098
Score = 40.0 bits (92), Expect = 0.014
Identities = 65/309 (21%), Positives = 115/309 (37%), Gaps = 30/309 (9%)
Query: 912 SNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPPQA-TSHLASAIDLAATSAGILSGNPL 970
++S+ TG+ + P+ S + + +P P A T H + A+SA PL
Sbjct: 3030 TSSASTGQATPLPVTSLSSVSTGDTTPLPVTSPSSASTGHATPLLVTDASSASTGQATPL 3089
Query: 971 PALDTEGLS--GISPLSSDEVTGAISGQDS------TGTHQDGDT--LPTVGGSDPFVS- 1019
P +S +PL + A +G + T + GDT LP S +
Sbjct: 3090 PVTSLSSVSTGDTTPLPVTSPSSASTGHATSLPVTDTSSASTGDTTSLPVTDTSSAYTGD 3149
Query: 1020 IPSRPEQEPVADSFQGSSVLSLSELPKAPLQNGLSIPLSSSESSSTRLSPP-----DVSA 1074
S P + + S ++ L ++E + + ++ + S+ST + P SA
Sbjct: 3150 TTSLPVTDTSSSSTGDTTPLLVTETSSVSTGHATPLLVTDASSASTGHATPLHVTSPSSA 3209
Query: 1075 LLDISLPGPPED--ALSQGE----PATHISDS-------IIEIAISSGQYGEGVPLSPAK 1121
+ P P D ++S G P T +S + + ISS G+ PL
Sbjct: 3210 STGDTTPVPVTDTSSVSTGHATPLPVTGLSSASTGDTTRLPVTDISSASTGQATPLPVTN 3269
Query: 1122 LNGSDSSKSLPSPSSSPQPHWIASPTHDPQWYPSDSTDSSLSSLFASFISPEKSRKMLPT 1181
+ + ++P P +SP T P S ++ + + + S + P
Sbjct: 3270 TSSVSTGDTMPLPVTSPSSASTGHATPLPVTSTSSASTGHATPVPVTSTSSASTGHTTPL 3329
Query: 1182 PIGTNSGTS 1190
P+ S S
Sbjct: 3330 PVTDTSSAS 3338
Score = 39.3 bits (90), Expect = 0.024
Identities = 58/313 (18%), Positives = 113/313 (36%), Gaps = 42/313 (13%)
Query: 912 SNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPPQATSHLASAI---DLAATSAGILSGN 968
++S+ TG + P+ + + + +P P A++ A + D ++ S G +
Sbjct: 2182 TSSASTGHATPLPVTDTSSASTGQATPLPVTSPSSASTGHAIPLLVTDTSSASTGQATPL 2241
Query: 969 PLPALDTEGLSGISPLSSDEVTGAISGQ------DSTGTHQDGDTLPTVGGSDPFVSIPS 1022
P+ +L + +PL + + +G S + GDT P
Sbjct: 2242 PVTSLSSASTGDTTPLPVTDASSVSTGHATSLPVTSLSSVSTGDTTPL------------ 2289
Query: 1023 RPEQEPVADSFQGSSVLSLSELPKAPLQNGLSIPLSSSESSSTRLSPPDVSALLDISLPG 1082
P P + S ++ L +++ A + +P++S S+ST + P LP
Sbjct: 2290 -PVTSPSSASTGHATPLHVTDASSASTGHATPLPVTSLSSASTGDTTP---------LPV 2339
Query: 1083 PPEDALSQGEPAT-HISDS----------IIEIAISSGQYGEGVPLSPAKLNGSDSSKSL 1131
+ S G H++D+ + + SS G PL + + + +
Sbjct: 2340 TSPSSASTGHATPLHVTDASSVSTGDTTPLPVTSSSSASSGHTTPLPVTDASSASTGDTT 2399
Query: 1132 PSPSSSPQPHWIASPTHDPQWYPSDSTDSSLSSLFASFISPEKSRKMLPTPIGTNSGTSL 1191
P P + TH P S ++ + L + +S + P P+ + S S
Sbjct: 2400 PLPVTDTSSASTGHATHLPVTGLSSASTGDTTRLPVTNVSSASTGHATPLPVTSTSSAST 2459
Query: 1192 LGPSLLDGNSRDS 1204
+ L G S
Sbjct: 2460 GDTTPLPGTDTSS 2472
Score = 38.9 bits (89), Expect = 0.032
Identities = 56/244 (22%), Positives = 96/244 (39%), Gaps = 22/244 (9%)
Query: 912 SNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPPQATSHLASAIDLAATSAGILSGN-PL 970
++S TG + P+ S+ + + +P P A++ A+ + + +TS+ PL
Sbjct: 3862 TSSVSTGHATPLPVTSTSSVSTGHATPLPVTSPSSASTGHATPVPVTSTSSASTGDTTPL 3921
Query: 971 PALDTEGLSG--ISPLSSDEVTGAISGQDSTGTHQDGDTLPTVGGSD-PFVSIPSRPEQE 1027
P + LS +PL + A G ST D + T + P S+ S +
Sbjct: 3922 PVTNASSLSTGHATPLHVTSPSSASRGDTSTLPVTDASSASTGHATPLPLTSLSSVSTGD 3981
Query: 1028 ----PVADSFQGS----------SVLSLSELPKAPLQNGLSIPLSSSESSSTRLSPPDVS 1073
PV D+ S S+ S+S PL ++IP S+S +T L D S
Sbjct: 3982 TTPLPVTDTSSASTGQATPLPVTSLSSVSTGDTTPLP--VTIPSSASSGHTTSLPVTDAS 4039
Query: 1074 ALLDISLPGPPEDALSQGEPATHISDSIIEIAISSGQYGEGVPLSPAKLNGSDSSKSLPS 1133
++ + G P S +T + + SS G PL + + + + P
Sbjct: 4040 SVS--TGHGTPLPVTSTSSASTGDTTPLPVTDTSSASTGHATPLPVTDTSSASTGHATPL 4097
Query: 1134 PSSS 1137
P +S
Sbjct: 4098 PVTS 4101
Score = 38.5 bits (88), Expect = 0.041
Identities = 63/325 (19%), Positives = 114/325 (35%), Gaps = 31/325 (9%)
Query: 897 PSENQSHNVCSFSILSNSSV-TGRGSFRPI-QSSLTKAALSRPIVPKVLPPQATSHLASA 954
PS S + + SSV TG + P+ +S + P+ +T H
Sbjct: 2710 PSSASSGHTTPLPVTDASSVSTGHATSLPVTDASSVSTGHATPLPVTDASSVSTGHATPL 2769
Query: 955 IDLAATSAGILSGNPLPALDTEGLS----------GISPLSSDEVTGAISGQDSTGTHQD 1004
+ +S PLP DT S +S +S+ + T S+ +
Sbjct: 2770 PLTSLSSVSTGDTTPLPVTDTSSASTGQATPLPVTSLSSVSTGDTTPLPVTDTSSASTGH 2829
Query: 1005 GDTLPTVGGSDPFVSIPSR-PEQEPVADSFQGSSVLSLSELPKAPLQNGLSIPLSSSESS 1063
+LP S + P+ + + S +++L +++ A + + S+P++ + S
Sbjct: 2830 ATSLPVTDTSSASTGHATPLPDTDTSSASTGHATLLPVTDTSSASIGHATSLPVTDTSSI 2889
Query: 1064 STRLSPP-----DVSALLDISLPGPPEDALSQG----------EPATHISDSIIEIAI-- 1106
ST + P SA + P P D S P++ + + +
Sbjct: 2890 STGHATPLHVTSPSSASTGHATPLPVTDTSSASTGHANPLHVTSPSSASTGHATPLPVTD 2949
Query: 1107 -SSGQYGEGVPLSPAKLNGSDSSKSLPSPSSSPQPHWIASPTHDPQWYPSDSTDSSLSSL 1165
SS G PL L+ + + P P +SP T P S ++ ++L
Sbjct: 2950 TSSASTGHATPLPVTSLSSVSTGDTTPLPVTSPSSASTGHTTPLPVTDTSSASTGQATAL 3009
Query: 1166 FASFISPEKSRKMLPTPIGTNSGTS 1190
+ S + P P+ S S
Sbjct: 3010 PVTSTSSASTGDTTPLPVTDTSSAS 3034
Score = 38.1 bits (87), Expect = 0.054
Identities = 98/478 (20%), Positives = 162/478 (33%), Gaps = 76/478 (15%)
Query: 745 LALEANTISTASVRPAQ-EEQSMTPPGKVVTVSSRSPRCPRNQASLRSSKTFPPSSAPCS 803
L + +++ST P S G V + SP + AS + P +S +
Sbjct: 1474 LVTDTSSVSTGDTTPLPVTSTSSASTGHVTPLHVTSP----SSASTGHATPLPVTSLSSA 1529
Query: 804 SGLRNPPRPLLVPGPSSTG----------SNDSDGGLFAVPTTLPPNSRHGKLFS-PSKE 852
S P P+ P +STG S+ S G +P T P ++ G P +
Sbjct: 1530 STGDTMPLPVTSPSSASTGDTTPLPVTDASSVSTGHTTPLPVTSPSSASTGHTTPLPVTD 1589
Query: 853 AELTFRQHLNSISMQSDFFLPKPRKLRNRHLRKPLVVQRTLLPRPSENQSHNVCSFSILS 912
+ + + S P H PL V T + V + S LS
Sbjct: 1590 TSSASKGDTTPLPVTS------PSSASTGHTT-PLPVTDTSSASTGDTTPLPVTNASSLS 1642
Query: 913 NSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPPQATSHLASAIDLAATSAGILSGNPLPA 972
T P+ + +A + P LP +TS + S G + P+
Sbjct: 1643 TGHAT------PLHVTSPSSASTGHATP--LPVTSTS---------SASTGHATPLPVTG 1685
Query: 973 LDTEGLSGISPLSSDEVTGAISGQ------DSTGTHQDGDTLPTVGGSDPFVSIPSRPEQ 1026
L + + L +V+ A +GQ S + GDT P P
Sbjct: 1686 LSSATTDDTTRLPVTDVSSASTGQATPLPVTSLSSVSTGDTTPL-------------PVT 1732
Query: 1027 EPVADSFQGSSVLSLSELPKAPLQNGLSIPLSSSESSSTRLSPPDVSALLDISLPGPPED 1086
P + S +S L +++ A +P++ + S ST + P P
Sbjct: 1733 SPSSASTGHASPLLVTDASSASTGQATPLPVTDTSSVSTAHATP------------LPVT 1780
Query: 1087 ALSQGEPATHISDSIIEIAISSGQYGEGVPLSPAKLNGSDSSKSLPSPSSSPQPHWIASP 1146
LS +T + + +SS G+ +PL + + + + P P +
Sbjct: 1781 GLSSA--STDDTTRLPVTDVSSASTGQAIPLPVTSPSSASTGDTTPLPVTDASSASTGDT 1838
Query: 1147 THDPQWYPSDSTDSSLSSL---FASFISPEKSRKMLPTPIGTNSGTSLLGPSLLDGNS 1201
T P PS ++ +SL AS +S + +L T + S + D NS
Sbjct: 1839 TSLPVTIPSSASSGHTTSLPVTDASSVSTGHATSLLVTDASSVSTGDTTPLPVTDTNS 1896
Score = 37.0 bits (84), Expect = 0.12
Identities = 99/492 (20%), Positives = 161/492 (32%), Gaps = 50/492 (10%)
Query: 747 LEANTISTASVRPAQEEQSMTPPGKVVTVSSRSPRCPRNQASLRSSKTFPPSSAPCSSGL 806
L S+AS A +P ++ P + AS + P +S S
Sbjct: 2913 LPVTDTSSASTGHANPLHVTSPSSASTGHATPLPVTDTSSASTGHATPLPVTSLSSVSTG 2972
Query: 807 RNPPRPLLVPGPSSTG----------SNDSDGGLFAVPTTLPPNSRHGKLF--------- 847
P P+ P +STG S+ S G A+P T ++ G
Sbjct: 2973 DTTPLPVTSPSSASTGHTTPLPVTDTSSASTGQATALPVTSTSSASTGDTTPLPVTDTSS 3032
Query: 848 SPSKEAELTFRQHLNSISMQSDFFLP--KPRKLRNRHLRKPLVVQRTLLPRPSENQSHNV 905
+ + +A L+S+S LP P H PL+V + V
Sbjct: 3033 ASTGQATPLPVTSLSSVSTGDTTPLPVTSPSSASTGHAT-PLLVTDASSASTGQATPLPV 3091
Query: 906 CSFSILSNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPPQATSHLASAIDLAATSAGIL 965
S S +S T P +S T A S P+ + D ++ G
Sbjct: 3092 TSLSSVSTGDTTPLPVTSPSSAS-TGHATSLPVTDTSSASTGDTTSLPVTDTSSAYTGDT 3150
Query: 966 SGNPLPALDTEGLSGISPLSSDEVTGAISGQDSTGTHQDGDTLPTVGGSDPFVSIPSRPE 1025
+ P+ + +PL E + +G + D + T + V+ PS
Sbjct: 3151 TSLPVTDTSSSSTGDTTPLLVTETSSVSTGHATPLLVTDASSASTGHATPLHVTSPSSAS 3210
Query: 1026 QE-----PVADSFQGSS----VLSLSELPKAPLQNGLSIPLSSSESSSTRLSPP------ 1070
PV D+ S+ L ++ L A + +P++ S+ST + P
Sbjct: 3211 TGDTTPVPVTDTSSVSTGHATPLPVTGLSSASTGDTTRLPVTDISSASTGQATPLPVTNT 3270
Query: 1071 -DVSALLDISLPGPPEDALSQGE----PATHISDS-------IIEIAISSGQYGEGVPLS 1118
VS + LP + S G P T S + + + SS G PL
Sbjct: 3271 SSVSTGDTMPLPVTSPSSASTGHATPLPVTSTSSASTGHATPVPVTSTSSASTGHTTPLP 3330
Query: 1119 PAKLNGSDSSKSLPSPSSSPQPHWIASPTHDPQWYPSDSTDSSLSSLFASFISPEKSRKM 1178
+ + + + P P +SP T PS ++ S+L + S +
Sbjct: 3331 VTDTSSASTGDTTPLPVTSPSSASTGHTTPLHVTIPSSASTGDTSTLPVTGASSASTGHA 3390
Query: 1179 LPTPIGTNSGTS 1190
P P+ S S
Sbjct: 3391 TPLPVTDTSSVS 3402
Score = 36.2 bits (82), Expect = 0.20
Identities = 102/460 (22%), Positives = 160/460 (34%), Gaps = 63/460 (13%)
Query: 772 VVTVSSRS-----PRCPRNQASLRSSKTFPPSSAPCSSGLRNPPRPLLVPGPSSTGSNDS 826
V VSS S P + +S + T P SS PLLV SS + D+
Sbjct: 2435 VTNVSSASTGHATPLPVTSTSSASTGDTTPLPGTDTSSVSTGHTTPLLVTDASSVSTGDT 2494
Query: 827 DGGLFAVPTTLPPNSRHGKLFSPSKEAELTFRQHLNSISMQSDFFLP--KPRKLRNRHLR 884
+P T P ++ G +P + S S LP L RH
Sbjct: 2495 T----RLPVTSPSSASTGHT-TPLPVTDTP------SASTGDTTPLPVTNASSLSTRHAT 2543
Query: 885 KPLVVQRTLLPRPSENQSHNVCSFSILSNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLP 944
V PS + + S + +++S G P+ + T +A + P +
Sbjct: 2544 SLHVTS------PSSASTGHATSLPV-TDTSAASTGHATPLPVTSTSSASTGDTTPLPVT 2596
Query: 945 PQATSHLASAIDLAAT---SAGILSGNPLPALDTEGLSG--ISPLSSDEVTGAISGQDST 999
++ A L T SA PLP DT S +PL T ++S +T
Sbjct: 2597 DTYSASTGQATPLPVTDTSSASTGDTTPLPVTDTSSASTGHATPLPVTN-TSSVSTGHAT 2655
Query: 1000 GTHQDGDTLPTVGGSDPFVSIPSRPEQEPVADSFQGSS--VLSLSELPKAPLQNG----- 1052
H + + G + P PV D+ S+ SL + + G
Sbjct: 2656 PLHVTSPSSASTGHTTPL----------PVTDASSVSTGHATSLPVTDASSVFTGHATSL 2705
Query: 1053 -LSIPLSSSESSSTRLSPPDVSALLD---ISLPGPPEDALSQGE----PATHISD----- 1099
++IP S+S +T L D S++ SLP ++S G P T S
Sbjct: 2706 PVTIPSSASSGHTTPLPVTDASSVSTGHATSLPVTDASSVSTGHATPLPVTDASSVSTGH 2765
Query: 1100 --SIIEIAISSGQYGEGVPLSPAKLNGSDSSKSLPSPSSSPQPHWIASPTHDPQWYPSDS 1157
+ ++SS G+ PL + + + ++ P P +S T P S +
Sbjct: 2766 ATPLPLTSLSSVSTGDTTPLPVTDTSSASTGQATPLPVTSLSSVSTGDTTPLPVTDTSSA 2825
Query: 1158 TDSSLSSLFASFISPEKSRKMLPTPIGTNSGTSLLGPSLL 1197
+ +SL + S + P P S S +LL
Sbjct: 2826 STGHATSLPVTDTSSASTGHATPLPDTDTSSASTGHATLL 2865
Score = 35.4 bits (80), Expect = 0.35
Identities = 67/314 (21%), Positives = 109/314 (34%), Gaps = 73/314 (23%)
Query: 890 QRTLLPR--PSENQSHNVCSFSILSNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPPQA 947
Q T LP PS + S + + S SSV+ G P+ + +A + + P + +
Sbjct: 3565 QATPLPVTIPSSSSSGHTTPLPVTSTSSVS-TGHVTPLHVTSPSSASTGHVTPLPVTSTS 3623
Query: 948 TSHLASAIDLAATSAGILS---GNPLPALDTEGLSGISPLSSDEVTGAISGQDSTGTHQD 1004
++ A L T A +S PLP D S
Sbjct: 3624 SASTGHATPLLVTDASSVSTGHATPLPVTDASSAS------------------------T 3659
Query: 1005 GDTLPTVGGSDPFVSIPSRPEQEPVADSFQGSS----VLSLSELPKAPLQNGLSIPLSSS 1060
GDT P PV D+ S+ L ++ L + +P++ +
Sbjct: 3660 GDTTPL-----------------PVTDTSSASTGQATPLPVTSLSSVSTGDTTPLPVTDA 3702
Query: 1061 ESSSTRLSPPDVSALLDISLPGPPEDALSQGEPATHISDSIIEIAISSGQYGEGVPLSPA 1120
S+ST + P L +++P + P T + SS G PL
Sbjct: 3703 SSASTGHATP-----LPVTIPSSVSTGDTMPLPVT---------SPSSASTGHATPLPVT 3748
Query: 1121 KLNGSDSSKSLPSP----SSSPQPHWIASPTHDPQWYPSDSTDSSLSSLFASFISPEKSR 1176
L+ + + + P P SS+ H P D S STD + + L + +S +
Sbjct: 3749 GLSSASTGDTTPLPVTDTSSASTRHATPLPVTDTS---SASTDDT-TRLPVTDVSSASTG 3804
Query: 1177 KMLPTPIGTNSGTS 1190
P P+ + S S
Sbjct: 3805 HATPLPVTSTSSAS 3818
Score = 34.3 bits (77), Expect = 0.78
Identities = 62/312 (19%), Positives = 105/312 (33%), Gaps = 32/312 (10%)
Query: 911 LSNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPPQATSHLASAIDLAATSAGILSGN-- 968
++++S G P+ + +A + P + +++ + L TS S
Sbjct: 1283 VTSTSSASTGHVTPLHVTSPSSASTGHATPLPVTSLSSASTGDTMPLPVTSPSSASTGDT 1342
Query: 969 -PLPALDTEGLSG--ISPLSSDEVTGAISGQ------DSTGTHQDGDTLP---------T 1010
PLP D +S +PL + + A +GQ S + GDT P +
Sbjct: 1343 TPLPVTDASSVSTGHTTPLHVTDASSASTGQATPLPVTSLSSVSTGDTTPLPVTSPSSAS 1402
Query: 1011 VGGSDPFV----SIPSRPEQEPV----ADSFQGSSVLSLSELPKAPLQNGLSIPLSSSES 1062
G + P + S S P+ A S SL + G + PL +++
Sbjct: 1403 TGHATPLLVTDTSSASTGHATPLPVTDASSVSTDHATSLPVTIPSAASTGHTTPLPVTDT 1462
Query: 1063 SSTRLSPPDVSALLDISLPGP----PEDALSQGEPATHISDSIIEIAISSGQYGEGVPLS 1118
SS + D S P S +T + + SS G PL
Sbjct: 1463 SSASTGQATSLLVTDTSSVSTGDTTPLPVTSTSSASTGHVTPLHVTSPSSASTGHATPLP 1522
Query: 1119 PAKLNGSDSSKSLPSPSSSPQPHWIASPTHDPQWYPSDSTDSSLSSLFASFISPEKSRKM 1178
L+ + + ++P P +SP T P S + + L + S +
Sbjct: 1523 VTSLSSASTGDTMPLPVTSPSSASTGDTTPLPVTDASSVSTGHTTPLPVTSPSSASTGHT 1582
Query: 1179 LPTPIGTNSGTS 1190
P P+ S S
Sbjct: 1583 TPLPVTDTSSAS 1594
Score = 34.3 bits (77), Expect = 0.78
Identities = 58/275 (21%), Positives = 93/275 (33%), Gaps = 43/275 (15%)
Query: 897 PSENQSHNVCSFSILSNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPPQATSHLASAID 956
PS + + + SSV+ G P+ + + +A S P + +++
Sbjct: 2342 PSSASTGHATPLHVTDASSVS-TGDTTPLPVTSSSSASSGHTTPLPVTDASSASTGDTTP 2400
Query: 957 LAATSAGILSGNPLPALDTEGLSGISP-----LSSDEVTGAISGQ------DSTGTHQDG 1005
L T S L GLS S L V+ A +G ST + G
Sbjct: 2401 LPVTDTSSASTGHATHLPVTGLSSASTGDTTRLPVTNVSSASTGHATPLPVTSTSSASTG 2460
Query: 1006 DTLPTVGGSDPFVSIPSR-------------------PEQEPVADSFQGSSVLSLSELPK 1046
DT P G VS P P + S ++ L +++ P
Sbjct: 2461 DTTPLPGTDTSSVSTGHTTPLLVTDASSVSTGDTTRLPVTSPSSASTGHTTPLPVTDTPS 2520
Query: 1047 APLQNGLSIPLSSSESSSTR-------LSPPDVSALLDISLPGPPEDALSQGEPATHISD 1099
A + +P++++ S STR SP S SLP A S G +
Sbjct: 2521 ASTGDTTPLPVTNASSLSTRHATSLHVTSPSSASTGHATSLPVTDTSAASTGH-----AT 2575
Query: 1100 SIIEIAISSGQYGEGVPLSPAKLNGSDSSKSLPSP 1134
+ + SS G+ PL + + ++ P P
Sbjct: 2576 PLPVTSTSSASTGDTTPLPVTDTYSASTGQATPLP 2610
Score = 33.9 bits (76), Expect = 1.0
Identities = 52/249 (20%), Positives = 89/249 (35%), Gaps = 29/249 (11%)
Query: 947 ATSHLASAIDLAATSAGILSGNPLPALDTEGLSG--ISPLSSDEVTGAISGQDSTGTHQD 1004
+T H S +SA LP DT S +PL + + A +GQ +T
Sbjct: 2154 STGHATSLPVTDTSSASTGHATSLPVTDTSSASTGHATPLPVTDTSSASTGQ-ATPLPVT 2212
Query: 1005 GDTLPTVGGSDPFVSIPSRPEQEPVADSFQGSSVLSLSELPKAPLQNGLSIPLSSSESSS 1064
+ + G + P + + A +S+ S S PL + +S+ ++S
Sbjct: 2213 SPSSASTGHAIPLLVTDTSSASTGQATPLPVTSLSSASTGDTTPLPVTDASSVSTGHATS 2272
Query: 1065 ---TRLSPPDVSALLDISLPGPPEDALSQGEPATHISDSIIEIAISSGQYGEGVPLSPAK 1121
T LS + + P + P H++D+ SS G PL
Sbjct: 2273 LPVTSLSSVSTGDTTPLPVTSPSSASTGHATPL-HVTDA------SSASTGHATPLPVTS 2325
Query: 1122 LNGSDSSKSLPSPSSSPQPHWIASPTHDPQWYPSDSTDSSLSSLFASFISPEKSRKMLPT 1181
L+ + + + P P +SP AS H + +D++ S P
Sbjct: 2326 LSSASTGDTTPLPVTSPSS---ASTGHATPLHVTDASSVSTGDT-------------TPL 2369
Query: 1182 PIGTNSGTS 1190
P+ ++S S
Sbjct: 2370 PVTSSSSAS 2378
Score = 33.9 bits (76), Expect = 1.0
Identities = 63/328 (19%), Positives = 115/328 (35%), Gaps = 48/328 (14%)
Query: 911 LSNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPPQATSHLASAIDLAATSAGILSGN-- 968
++N+S G P+ + +A + P + +++ A + TS S
Sbjct: 3267 VTNTSSVSTGDTMPLPVTSPSSASTGHATPLPVTSTSSASTGHATPVPVTSTSSASTGHT 3326
Query: 969 -PLPALDTEGLS--GISPLSSDEVTGAISGQD--------STGTHQDGDTLPTVGGSDPF 1017
PLP DT S +PL + A +G S+ + D TLP G S
Sbjct: 3327 TPLPVTDTSSASTGDTTPLPVTSPSSASTGHTTPLHVTIPSSASTGDTSTLPVTGASSAS 3386
Query: 1018 VSIPSR-PEQEPVADSFQGSSVLSLSELPKAPLQNGLSIPLSSSESSST-RLSPPDVSAL 1075
+ P + + S ++ L ++ L + +P++ + S+ST + +P V++L
Sbjct: 3387 TGHATPLPVTDTSSVSTGHATPLPVTSLSSVSTGDTTPLPVTDASSASTGQATPLPVTSL 3446
Query: 1076 LDIS----------------------LPGPPEDALSQGE----PATHISDS-------II 1102
+S LP + S G+ P T S + +
Sbjct: 3447 SSVSTGDTTPLLVTDASSVSTGHATPLPVTDTSSASTGDTTRLPVTDTSSASTGQATPLP 3506
Query: 1103 EIAISSGQYGEGVPLSPAKLNGSDSSKSLPSPSSSPQPHWIASPTHDPQWYPSDSTDSSL 1162
++SS G+ PL + + + P P + T P S ++
Sbjct: 3507 VTSLSSVSTGDTTPLLVTDASSVSTGHATPLPVTDTSSASTGDTTRLPVTDTSSASTGQA 3566
Query: 1163 SSLFASFISPEKSRKMLPTPIGTNSGTS 1190
+ L + S S P P+ + S S
Sbjct: 3567 TPLPVTIPSSSSSGHTTPLPVTSTSSVS 3594
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 50.4 bits (119), Expect = 1e-05
Identities = 140/704 (19%), Positives = 240/704 (34%), Gaps = 97/704 (13%)
Query: 485 SSGESSPESAPGEGAALSLSSPDAP----------------DRPPPRHQDTGPCLEKTPA 528
S G S P S PGEG+ S PD+ D P T T A
Sbjct: 909 SEGTSMPTSTPGEGSTPLTSMPDSTTPVVSSEARTLSATPVDTSTPVTTSTEATSSPTTA 968
Query: 529 EGRDSPTREPGALPCACGQLPDLEDELSLLDPLPRYLKSCQDLIVPEQCRCADTRPGSEQ 588
EG PT P G P +S L+ + T P
Sbjct: 969 EGTSIPTSTPSE-----GTTPLTSTPVS------------HTLVANSEASTLSTTPVDSN 1011
Query: 589 PPL---GGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEELQEKGS 645
PL A+SP P + E + + PS P + V T +A + L +
Sbjct: 1012 TPLTTSTEASSP----PPTAEGTSMPTSTPSEGSTPLTRMPVSTTMVASSETSTLSTTPA 1067
Query: 646 PAGPPPSQGQPAARPPKEVPASRLAQQLREEGWNLQTSESLTL-----AEVYLMMGKPSK 700
P + A+ + + EG TS ++ +E + P
Sbjct: 1068 DTSTPVTTYSQASSSSTTADGTSMPTSTYSEGSTPLTSVPVSTRLVVSSEASTLSTTPVD 1127
Query: 701 LQLEYDWLGPGRQDPRPG---SLPTALHKQRLLSCLLKLISTEVNPKLALEANTISTASV 757
+ P S+PT+ + +ST + ++ EANT+ST V
Sbjct: 1128 TSIPVTTSTEASSSPTTAEGTSIPTSPPSEGTTPLASMPVSTTL--VVSSEANTLSTTPV 1185
Query: 758 ----RPAQEEQSMTPPGKVVTVSSRSPRCPRNQASLRSSKTFPPSSAPCSSGLRNPPRPL 813
+ A ++ +PP V+S P +++ +S + S P+
Sbjct: 1186 DSKTQVATSTEASSPP-PTAEVTSMPTSTPGERSTPLTSMPVRHTPVASSEASTLSTSPV 1244
Query: 814 LVPGPSSTGSNDSDGGLFAVPTTLPPN-SRHGKLFSPSKEAELTFRQHLNSISMQSDFFL 872
P +T + S A T+LP + + G S T S ++ L
Sbjct: 1245 DTSTPVTTSAETSSSPTTAEGTSLPTSTTSEGSTLLTSIPVSTTL-----VTSPEASTLL 1299
Query: 873 PKPRKLRNRHLRKPLVVQRTL--LPRPSENQSHNVCSFSILSNSSVTGRGSFRPIQSSLT 930
P + P+V + P P+E S ++S GR I + T
Sbjct: 1300 TTPVDTKG-----PVVTSNEVSSSPTPAEGTSMPTSTYS-------EGRTPLTSIPVNTT 1347
Query: 931 KAALSRPIVPKVLPPQATSHLASAIDLAATSAGILSGNPLPALDTEGLSGISPLSSDEV- 989
A S + P ++ + ++ + A +S G +P ++ G +PL+S V
Sbjct: 1348 LVASSAISILSTTPVDNSTPVTTSTE-ACSSPTTSEGTSMP--NSNPSEGTTPLTSIPVS 1404
Query: 990 -TGAISGQDSTGTHQDGDTLPTVGGSDPFVSIPSRPEQEPVADSFQGSSVLSLSELPKAP 1048
T +S + ST + DT S S P+ E + S L +P +
Sbjct: 1405 TTPVVSSEASTLSATPVDTSTPGTTSAEATSSPTTAEGISIPTSTPSEGKTPLKSIPVS- 1463
Query: 1049 LQNGLSIPLSSSESSSTRLSP-----PDVSALLDISLPGPPEDALSQGEPATHISDSIIE 1103
+ P+++SE+S+ +P P V++ S P P E + S ++
Sbjct: 1464 -----NTPVANSEASTLSTTPVDSNSPVVTSTAVSSSPTPAEGTSIAISTPSEGSTALTS 1518
Query: 1104 IAISSGQYGEGVPLSPAKLNGSDSSKSLPSPSSSPQPHWIASPT 1147
I +S+ ++ +++N ++ ++ S + +SPT
Sbjct: 1519 IPVST------TTVASSEINSLSTTPAVTSTPVTTYSQASSSPT 1556
Score = 49.7 bits (117), Expect = 2e-05
Identities = 150/721 (20%), Positives = 248/721 (34%), Gaps = 101/721 (14%)
Query: 499 AALSLSSPDAPDRPPPRHQDTGPCLEKTPAEGRDSPTREPGALPCACGQLPDLEDELSLL 558
+A+S S D P T T +EG PT PG +PD
Sbjct: 880 SAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTSTPGEGSTPLTSMPDSTTP---- 935
Query: 559 DPLPRYLKSCQDLIVPEQCRCADTRPGSEQPPLGGAASPEVLAPVSKEAADLAPTGPSPR 618
+V + R P P+ ++ +P + E + + PS
Sbjct: 936 -------------VVSSEARTLSATPVDTSTPV-TTSTEATSSPTTAEGTSIPTSTPSEG 981
Query: 619 PGPGLLLDVCTKDLADAPAEELQEKGSPAGPPPSQGQPAARPPKEVPASRLAQQLREEGW 678
P V +A++ A L + P + A+ PP + + EG
Sbjct: 982 TTPLTSTPVSHTLVANSEASTLSTTPVDSNTPLTTSTEASSPPPTAEGTSMPTSTPSEGS 1041
Query: 679 N-----------LQTSESLTLAEVYLMMGKPSKLQLEYDWLGPGRQDPRPGSLPTALHKQ 727
+ +SE+ TL+ P Y S+PT+ + +
Sbjct: 1042 TPLTRMPVSTTMVASSETSTLSTTPADTSTP---VTTYSQASSSSTTADGTSMPTSTYSE 1098
Query: 728 RLLSCLLKLISTEVNPKLALEANTISTASVRPAQEEQSMTPPGKVVTVSSRSPRCPRNQA 787
S L + ++ EA+T+ST V + P T +S SP A
Sbjct: 1099 G--STPLTSVPVSTRLVVSSEASTLSTTPV-------DTSIPVTTSTEASSSP----TTA 1145
Query: 788 SLRSSKTFPPSSAPCSSGLRNPPRPLLVPGPSSTGSNDSDGGLFAVPTTLPPNSRHGKLF 847
S T PPS L+V ++T S V T+ +
Sbjct: 1146 EGTSIPTSPPSEGTTPLASMPVSTTLVVSSEANTLSTTPVDSKTQVATSTEAS------- 1198
Query: 848 SPSKEAELTFRQHLNSISMQSDFFLPKPRKLRNRHLRKPLVV--QRTLLPRPSENQSHNV 905
SP AE+T SM + + L + +R V + + L + S V
Sbjct: 1199 SPPPTAEVT--------SMPTSTPGERSTPLTSMPVRHTPVASSEASTLSTSPVDTSTPV 1250
Query: 906 CSFSILSNSSVTGRGSFRPIQSSLTKAALSRPI---VPKVLPPQATSHLASAIDL--AAT 960
+ + S+S T G+ P ++ + L I V P+A++ L + +D
Sbjct: 1251 TTSAETSSSPTTAEGTSLPTSTTSEGSTLLTSIPVSTTLVTSPEASTLLTTPVDTKGPVV 1310
Query: 961 SAGILSGNPLPALDTEGLS--------GISPLSSDEV--TGAISGQDSTGTHQDGDTLPT 1010
++ +S +P PA EG S G +PL+S V T S S + D
Sbjct: 1311 TSNEVSSSPTPA---EGTSMPTSTYSEGRTPLTSIPVNTTLVASSAISILSTTPVDNSTP 1367
Query: 1011 VGGSDPFVSIPSRPEQEPVADSFQGSSVLSLSELPKAPLQNGLSIPLSSSESSSTRLSPP 1070
V S S P+ E + +S L+ +P + + P+ SSE+S+ +P
Sbjct: 1368 VTTSTEACSSPTTSEGTSMPNSNPSEGTTPLTSIPVS------TTPVVSSEASTLSATP- 1420
Query: 1071 DVSALLDISLPGPPEDALSQGEPATHISDSIIEIAISSGQYG-EGVPLSPAKLNGSDSSK 1129
+D S PG A + P T SI S G+ + +P+S + S++S
Sbjct: 1421 -----VDTSTPG-TTSAEATSSPTTAEGISIPTSTPSEGKTPLKSIPVSNTPVANSEAST 1474
Query: 1130 SLPSPSSSPQPHWIASPTHDPQWYPSDSTDSSLSSLFASFISPEKSRKMLPTPIGTNSGT 1189
+P S P + S P++ T ++S+ E S + P+ T +
Sbjct: 1475 LSTTPVDSNSP-VVTSTAVSSSPTPAEGTSIAIST------PSEGSTALTSIPVSTTTVA 1527
Query: 1190 S 1190
S
Sbjct: 1528 S 1528
Score = 48.1 bits (113), Expect = 5e-05
Identities = 148/740 (20%), Positives = 255/740 (34%), Gaps = 111/740 (15%)
Query: 485 SSGESSPESAPGEGAA----------LSLSSPDAPDRPPPRHQDTG-----PCLEKTPAE 529
S G S P S P EG+ L +SS D+ P T T AE
Sbjct: 3149 SEGTSMPTSTPSEGSTPLTYMPVSTMLVVSSEDSTLSATPVDTSTPVTTSTEATSSTTAE 3208
Query: 530 GRDSPTREP--GALPCAC---GQLPDLEDELSLLDPLPRYLKSCQDLIVPEQCRCADTRP 584
G PT P G P P E S+L P V +
Sbjct: 3209 GTSIPTSTPSEGMTPLTSVPVSNTPVASSEASILSTTP----------VDSNTPLTTSTE 3258
Query: 585 GSEQPPLGGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEELQEKG 644
S PP + E + + PS P + V T +A + L
Sbjct: 3259 ASSSPP-------------TAEGTSMPTSTPSEGSTPLTSMPVSTTTVASSETSTLSTTP 3305
Query: 645 SPAGPPPSQGQPAARPPKEVPASRLAQQLREEGWNLQT-----------SESLTLAEVYL 693
+ P + A+ P + + EG T SE+ TL+ +
Sbjct: 3306 ADTSTPVTTYSQASSSPPIADGTSMPTSTYSEGSTPLTNMSFSTTPVVSSEASTLSTTPV 3365
Query: 694 MMGKPSKLQLEYDWLGPGRQDPRPGSLPTALHKQRLLSCLLKLISTEVNPKLALEANTIS 753
P E L P + S+PT+ + +ST P ++ E NT+S
Sbjct: 3366 DTSTPVTTSTEAS-LSPTTAEGT--SIPTSSPSEGTTPLASMPVST--TPVVSSEVNTLS 3420
Query: 754 TASVRPAQEEQSMTPPGKVVTVSSRS--PRCPRNQASLRSSKTFPPSSAPCSSG----LR 807
T V + T T++ + P ++ S S P S+ P +S L
Sbjct: 3421 TTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLS-IMPLSTTPVASSEASTLS 3479
Query: 808 NPPRPLLVPGPSSTGSNDSDGGLFAVPTTLPPNSRHGKLFSPSKEAELTFR-------QH 860
P P +S+ +N S T P S G+ +P ++
Sbjct: 3480 TTPVDTSTPVTTSSPTNSSPT---TAEVTSMPTSTAGEGSTPLTNMPVSTTPVASSEAST 3536
Query: 861 LNSISMQSDFFLPKPRKLRNRHLRKPLVVQRTLLPRPSENQSHNVCSFSILSNSSVTGRG 920
L++ + S+ F+ + + P +Q T + + ++ + + +LS++ VT
Sbjct: 3537 LSTTPVDSNTFVTSSSQASS----SPATLQVTTMRMSTPSEGSSSLTTMLLSSTYVTSSE 3592
Query: 921 SFRPIQSSLTKA--------ALSRPIVPKV--LPPQATSHLASAIDLAATSAGILSGNPL 970
+ P S+ ++ + S P P+V LP S +++ + + S ++
Sbjct: 3593 ASTPSTPSVDRSTPVTTSTQSNSTPTPPEVITLPMSTPSEVSTPLTIMPVSTTSVT---- 3648
Query: 971 PALDTEGLSGISPLSSDEVTGAISGQDSTGTHQDGDTLPTVGGSDPFVSIPSRPEQEPVA 1030
+ G + P+ + + S+ +G T+P S+ + + P
Sbjct: 3649 --ISEAGTASTLPVDTSTPVITSTQVSSSPVTPEGTTMPIWTPSEGSTPLTTMPVSTTRV 3706
Query: 1031 DSFQGSSVLSLSELPKAPLQNGLSIPLSSSESSSTRLSPPDVSALLDISLPGPPEDALSQ 1090
S +GS++ + S + P+ SS+ ST +S VS ++IS G L
Sbjct: 3707 TSSEGSTLSTPSVVTSTPVTTSTEAISSSATLDSTTMS---VSMPMEISTLG--TTILVS 3761
Query: 1091 GEPATHISDS------IIEIAISSGQYGEGVPLSPAKLNGSDSSKSLPSPSSSPQPHWIA 1144
P T +S + ++S EG SP L G + ++P ++S + +
Sbjct: 3762 TTPVTRFPESSTPSIPSVYTSMSMTTASEG-SSSPTTLEG---TTTMPMSTTSERSTLLT 3817
Query: 1145 SPTHDPQWYPSDSTDSSLSS 1164
+ P S S S+LS+
Sbjct: 3818 TVLISPISVMSPSEASTLST 3837
Score = 47.0 bits (110), Expect = 1e-04
Identities = 164/771 (21%), Positives = 252/771 (32%), Gaps = 122/771 (15%)
Query: 495 PGEGAALSLSSPDAPDRPPPRHQDTGPCLEKTPAEGRDSPTREP--GALPCAC---GQLP 549
P + S S D P T T AEG PT P G P A P
Sbjct: 2408 PVVSSEASTHSTTPVDTSTPVTTSTEASSSPTTAEGTSIPTSPPSEGTTPLASMPVSTTP 2467
Query: 550 DLEDELSLLDPLPRYLKSCQDLIVPEQCRCADTRPGSEQPPLGGAASPEVL--------A 601
+ E L P + + + + + T P+ A+ L
Sbjct: 2468 VVSSEAGTLSTTP--VDTSTPMTTSTEASSSPTTAEDIVVPISTASEGSTLLTSIPVSTT 2525
Query: 602 PVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEELQEKGSPAGPPPSQGQPAARPP 661
PV+ A T P P + + A + G P + P + P
Sbjct: 2526 PVASPEASTLSTTPVDSNSPVVTSTEISSSATSAEGTSMPTSTYSEGSTPLRSMPVSTKP 2585
Query: 662 KEVPASRLAQQLREEGWNLQTSESLTLAEVYLMMGKPSKLQLEYDWLGPGRQDPRPGSLP 721
L +SE+ TL+ + P E +D S+P
Sbjct: 2586 ------------------LASSEASTLSTTPVDTSIPVTTSTETSSSPTTAKDT---SMP 2624
Query: 722 TALHKQRLLSCLLKLISTEVNPKLALEANTISTASV--------------RPAQEEQSMT 767
+ + S L+ST P + EA+T+ST V P E S
Sbjct: 2625 ISTPSEVSTSLTSILVSTM--PVASSEASTLSTTPVDTRTLVTTSTGTSSSPTTAEGSSM 2682
Query: 768 P---PGKVVTVSSR---SPRCPRNQASLRSSKTFPPSSAPCSSGLRNPPRPLLVPGPSST 821
P PG+ T + S N + S T +S P ++ P G S
Sbjct: 2683 PTSTPGERSTPLTNILVSTTLLANSEASTLSTTPVDTSTPVTTSAEASSSPTTAEGTSMR 2742
Query: 822 GSNDSDGGL---FAVPTTLPPNSRHGKLFSPSKEAELTFRQHLNSISMQSDFFLPKPRKL 878
S SDG + +TLP S S + A T S S P ++
Sbjct: 2743 ISTPSDGSTPLTSILVSTLPVASSEASTVSTT--AVDTSIPVTTSTEASSS---PTTAEV 2797
Query: 879 RNRHLRKPLVVQRTLLPRPSENQSHNVCSFSILSNSSVTGRGSFRPIQSSLTKAALSRPI 938
+ P T P S +H + S S T + P+ +S TKA+ S
Sbjct: 2798 TSMPTSTP---SETSTPLTSMPVNHTPVASSEAGTLSTTPVDTSTPVTTS-TKASSSPTT 2853
Query: 939 VPKVLPPQATSHLASAI---------DLAATSAGILSGNPLPA-----LDTEGLSGISPL 984
++ P +T+ S + +A++ A LS P+ TEG S SP
Sbjct: 2854 AEGIVVPISTASEGSTLLTSIPVSTTPVASSEASTLSTTPVDTSIPVTTSTEGSS--SPT 2911
Query: 985 SSDEVTGAISGQDSTGTHQDG---DTLPTVGGSDPFVSIPSRPEQEPVADSFQGSSVLSL 1041
+++ + IS T T+P G +S + PV S + SS +
Sbjct: 2912 TAEGTSMPISTPSEVSTPLTSILVSTVPVAGSEASTLSTTPVDTRTPVTTSAEASSSPTT 2971
Query: 1042 SELPKAPLQNG------------LSIPLSSSESSSTRLSPPDVSALLDISL--------- 1080
+E P+ ++P++SSE+S+ +P D S + S
Sbjct: 2972 AEGTSMPISTPGERRTPLTSMSVSTMPVASSEASTLSRTPADTSTPVTTSTEASSSPTTA 3031
Query: 1081 --PGPPEDALSQGE-PATHISDSIIEIAISSGQYGEGVPLSPAKLNGSDSSKSLPSPSSS 1137
G P S+G P T I S +AI E LS ++ + + SSS
Sbjct: 3032 EGTGIPISTPSEGSTPLTSIPVSTTPVAIP-----EASTLSTTPVDSNSPVVTSTEVSSS 3086
Query: 1138 PQPHWIASPTHDP-QWYPSDSTDSSLSSLFASFISPEKSRKMLPTPIGTNS 1187
P P A T P Y ST + + + ++ + TP+ T++
Sbjct: 3087 PTP---AEGTSMPISTYSEGSTPLTGVPVSTTPVTSSAISTLSTTPVDTST 3134
Score = 40.0 bits (92), Expect = 0.014
Identities = 140/712 (19%), Positives = 231/712 (32%), Gaps = 113/712 (15%)
Query: 493 SAPGEGAALSLSSPDAPDRPPPRHQDTGPCLEKTPAEGRDSPTREP--GALPCACGQLPD 550
+ P +A+S S D P T T +EG PT P G+ P
Sbjct: 3114 TTPVTSSAISTLSTTPVDTSTPVTTSTEAHSSPTTSEGTSMPTSTPSEGSTPLT------ 3167
Query: 551 LEDELSLLDPLPRYLKSCQDLIVPEQCRCADTRPGSEQPPLGGAASPEVLAPVSKEAADL 610
Y+ L+V + P P+ S E + + E +
Sbjct: 3168 -------------YMPVSTMLVVSSEDSTLSATPVDTSTPV--TTSTEATSSTTAEGTSI 3212
Query: 611 APTGPSPRPGPGLLLDVCTKDLADAPAEELQEKGSPAGPPPSQGQPAARPPKEVPASRLA 670
+ PS P + V +A + A L + P + A+ P + +
Sbjct: 3213 PTSTPSEGMTPLTSVPVSNTPVASSEASILSTTPVDSNTPLTTSTEASSSPPTAEGTSMP 3272
Query: 671 QQLREEGWNLQTS-----ESLTLAEVYLMMGKPSKLQLEYDWLGPGRQDPRPG---SLPT 722
EG TS ++ +E + P+ P S+PT
Sbjct: 3273 TSTPSEGSTPLTSMPVSTTTVASSETSTLSTTPADTSTPVTTYSQASSSPPIADGTSMPT 3332
Query: 723 ALHKQRLLSCLLKLISTEVNPKLALEANTISTASVRPAQEEQSMTPPGKVVTVSSRSPRC 782
+ + + S L +S P ++ EA+T+ST V + TP VT S+ +
Sbjct: 3333 STYSEG--STPLTNMSFSTTPVVSSEASTLSTTPV------DTSTP----VTTSTEASLS 3380
Query: 783 PRNQASLRSSKTFPPSSAPCSSGLRNPPRPLLVPGPSSTGSNDSDGGLFAVPTTLPPNSR 842
P + T P+S+P PL S+T S+ +T P +S
Sbjct: 3381 PTT-----AEGTSIPTSSPSEG-----TTPLASMPVSTTPVVSSEVNTL---STTPVDS- 3426
Query: 843 HGKLFSPSKEAELTFRQHLNSISMQSDFFLPKPRKLRNRHLRKPLVVQRTLLPRPSENQS 902
L + S EA P + + T LP + ++
Sbjct: 3427 -NTLVTTSTEAS-----------------------------SSPTIAEGTSLPTSTTSEG 3456
Query: 903 HNVCSFSILSNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPPQATSHLASAIDLAATSA 962
S LS + V S S T S P+ P +S + + TS
Sbjct: 3457 STPLSIMPLSTTPV---ASSEASTLSTTPVDTSTPVTTS--SPTNSSPTTAEVTSMPTST 3511
Query: 963 GILSGNPLPALDTEGLSGISPLSSDE-----VTGAISGQDSTGTHQDGDTLPTVGGSDPF 1017
PL + +P++S E T S T + Q + T+ +
Sbjct: 3512 AGEGSTPLTNMPV----STTPVASSEASTLSTTPVDSNTFVTSSSQASSSPATLQVTTMR 3567
Query: 1018 VSIPSRPEQEPVADSFQGSSVLSLSELPKAPLQNGLSIPLSSSESSSTRLSPPDVSALLD 1077
+S PS + V S + S P+++S S++ +PP+V
Sbjct: 3568 MSTPSEGSSSLTTMLLSSTYVTSSEASTPSTPSVDRSTPVTTSTQSNSTPTPPEV----- 3622
Query: 1078 ISLPGPPEDALSQGEPATHISDSIIEIAISSGQYGEGVPL--SPAKLNGSDSSKSLPSPS 1135
I+LP +S P T + S + IS +P+ S + + S S +P
Sbjct: 3623 ITLPMSTPSEVS--TPLTIMPVSTTSVTISEAGTASTLPVDTSTPVITSTQVSSSPVTPE 3680
Query: 1136 SSPQPHWIASPTHDPQWYPSDSTDSSLSSLFASFISPEKSRKMLPTPIGTNS 1187
+ P W S P ST SS ++ +P + TP+ T++
Sbjct: 3681 GTTMPIWTPSEGSTPLTTMPVSTTRVTSSEGSTLSTPS---VVTSTPVTTST 3729
Score = 37.7 bits (86), Expect = 0.070
Identities = 153/790 (19%), Positives = 261/790 (33%), Gaps = 112/790 (14%)
Query: 479 AADALQSSGESSPESAPGEGAAL---------SLSSPDAPDRPPPRHQDTGPCLEKTPAE 529
A+ + + G S SAP EG+ L ++SP+A P + T
Sbjct: 2081 ASSSATAEGSSMTISAPSEGSPLLTSIPLSTTPVASPEASTLSTTPVDSNSPVITSTEVS 2140
Query: 530 GRDSPTREPGALPCACGQLPDLEDELSLLDPLPRYLKSCQDLIVPEQCRCADTRPGSEQP 589
PT Q D + L +P ++ T P
Sbjct: 2141 SSPIPTEGTSM------QTSTYSDRRTPLTSMP----VSTTVVASSAISTLSTTPVDTST 2190
Query: 590 PLGGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEELQEKGSPAGP 649
P+ + +P + E + + PS P + V T + + A L
Sbjct: 2191 PVTNSTEAR-SSPTTSEGTSMPTSTPSEGSTPFTSMPVSTMPVVTSEASTLSATPVDTST 2249
Query: 650 PPSQGQPAARPPKEVPASRLAQQLREEGWNLQTS--ESLTL---AEVYLMMGKPSKLQLE 704
P + A P + + EG TS S TL +EV + P
Sbjct: 2250 PVTTSTEATSSPTTAEGTSIPTSTLSEGTTPLTSIPVSHTLVANSEVSTLSTTPVDSNTP 2309
Query: 705 YDWLGPGRQDPRPG---SLPTALHKQRLLSCLLKLISTEVNPKLALEANTIST------- 754
+ P S+PT+ + +ST + + E +T+ST
Sbjct: 2310 FTTSTEASSPPPTAEGTSMPTSTSSEGNTPLTRMPVSTTM--VASFETSTLSTTPADTST 2367
Query: 755 -------ASVRPAQEEQSMTPPGKVVTVSSRSPRCPRNQASLRSSK------TFPPSSAP 801
A P + + P S+ P + + SS+ T +S P
Sbjct: 2368 PVTTYSQAGSSPTTADDTSMPTSTYSEGSTPLTSVPVSTMPVVSSEASTHSTTPVDTSTP 2427
Query: 802 CSSGLRNPPRPLLVPGPSSTGSNDSDG--GLFAVPTTLPP--NSRHGKLFSPSKEAE--- 854
++ P G S S S+G L ++P + P +S G L + +
Sbjct: 2428 VTTSTEASSSPTTAEGTSIPTSPPSEGTTPLASMPVSTTPVVSSEAGTLSTTPVDTSTPM 2487
Query: 855 LTFRQHLNSISMQSDFFLPKPRKLRNRHLRKPLVVQRTLLPRPSE--------NQSHNVC 906
T + +S + D +P L + V T + P + + V
Sbjct: 2488 TTSTEASSSPTTAEDIVVPISTASEGSTLLTSIPVSTTPVASPEASTLSTTPVDSNSPVV 2547
Query: 907 SFSILSNSSVTGRGSFRPIQ--SSLTKAALSRPIVPKVLPPQATSHLASA---IDLAATS 961
+ + +S+S+ + G+ P S + S P+ K L S L++ + T+
Sbjct: 2548 TSTEISSSATSAEGTSMPTSTYSEGSTPLRSMPVSTKPLASSEASTLSTTPVDTSIPVTT 2607
Query: 962 AGILSGNPLPALDTEGLSGISPLSSDEVTGAI-------SGQDSTGTHQDGDTLPTVGGS 1014
+ S +P A DT S +T + S + ST + DT V S
Sbjct: 2608 STETSSSPTTAKDTSMPISTPSEVSTSLTSILVSTMPVASSEASTLSTTPVDTRTLVTTS 2667
Query: 1015 DPFVSIPSRPEQEPVADSFQGSSVLSLSELPKAPLQNGL--SIPLSSSESSSTRLSPPDV 1072
S P+ E + S G PL N L + L++SE+S+ +P D
Sbjct: 2668 TGTSSSPTTAEGSSMPTSTPGER--------STPLTNILVSTTLLANSEASTLSTTPVDT 2719
Query: 1073 SALLDISLPGPPEDALSQG------------EPATHISDSIIEIAISSGQYGEGVPLSPA 1120
S + S ++G P T I S + +A S E +S
Sbjct: 2720 STPVTTSAEASSSPTTAEGTSMRISTPSDGSTPLTSILVSTLPVASS-----EASTVSTT 2774
Query: 1121 KLNGSDSSKSLPSPSSSPQPHWIAS-PTHDPQWYPSDSTDSSLSSLFASF--ISPEKSRK 1177
++ S + SSSP + S PT P T + L+S+ + ++ ++
Sbjct: 2775 AVDTSIPVTTSTEASSSPTTAEVTSMPTSTP-----SETSTPLTSMPVNHTPVASSEAGT 2829
Query: 1178 MLPTPIGTNS 1187
+ TP+ T++
Sbjct: 2830 LSTTPVDTST 2839
Score = 37.4 bits (85), Expect = 0.092
Identities = 112/494 (22%), Positives = 188/494 (38%), Gaps = 91/494 (18%)
Query: 719 SLPTALHKQRLLSCLLKLISTEVNPKLALEANTISTASVRPAQEEQSMTPPGKVVTVSSR 778
S+PT+ + S L +S P + EA+T+ST V + TP VT SS
Sbjct: 500 SMPTSTPSEG--STPLTSMSVSTMPVASSEASTLSTTPV------DTSTP----VTTSSE 547
Query: 779 SPRCPRNQASLRSSKTFPPSSAPC--SSGLRNPP---RPLLVPGPSSTGSNDSDGGLFAV 833
+ + +S T P+S P S+ L N P R ++ S+T + +D F
Sbjct: 548 A-----SSSSTTPEGTSIPTSTPSEGSTPLTNMPVSTRLVVSSEASTTSTTPADSNTFVT 602
Query: 834 PTTLPPNSRHGKLFSPSKEAELTFRQHLNSISMQSDFFLPKPRKLRNRHLRKPLVVQR-- 891
++ + S S AE T SM + + + + + + LV
Sbjct: 603 TSS--------EASSSSTTAEGT--------SMPTSTYSERGTTITSMSVSTTLVASSEA 646
Query: 892 -TLLPRPSENQSHNVCSFSILSNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPPQATSH 950
TL P ++ + V + + ++SS T G+ P S+ T+ S P+ TS
Sbjct: 647 STLSTTPVDSNTP-VTTSTEATSSSTTAEGTSMPT-STYTEG--STPL---------TSM 693
Query: 951 LASAIDLAATSAGILSGNPLPALDTEGLSGISPLSSDEVTGAISGQDSTGTHQDGDTLPT 1010
+ +A++ A LS P+ +S VT + S T DG ++PT
Sbjct: 694 PVNTTLVASSEASTLSTTPVD-------------TSTPVTTSTEASSSPTT-ADGASMPT 739
Query: 1011 VGGSDPFVSIPSRPEQEPVADSFQGSSVLSLSELPKAPLQNGLSIPLSSSESSSTRLSPP 1070
S+ + S P + + S + S+ L PL I S+ S S +
Sbjct: 740 STPSEGSTPLTSMPVSKTLLTSSEAST------LSTTPLDTSTHITTSTEASCSPTTTE- 792
Query: 1071 DVSALLDISLPGPPEDALSQGEPATHISDSIIEIAISSGQYGEGVPLSPAKLNGSDSSKS 1130
+ IS P S+G P + I ++I+ E LS ++ + +
Sbjct: 793 --GTSMPISTP-------SEGSPLL----TSIPVSITPVTSPEASTLSTTPVDSNSPVTT 839
Query: 1131 LPSPSSSPQP---HWIASPTHDPQWYPSDSTDSSLSSLFASFISPEKSRKMLPTPIGTNS 1187
SSSP P + + T+ P S S + + S IS + + + TNS
Sbjct: 840 STEVSSSPTPAEGTSMPTSTYSEGRTPLTSMPVSTTLVATSAISTLSTTPVDTSTPVTNS 899
Query: 1188 GTSLLGPSLLDGNS 1201
+ P+ +G S
Sbjct: 900 TEARSSPTTSEGTS 913
Score = 37.0 bits (84), Expect = 0.12
Identities = 165/820 (20%), Positives = 267/820 (32%), Gaps = 132/820 (16%)
Query: 485 SSGESSPESAPGEGAALSLSSPDAPDRPPPRHQDTGPCLEKTPAEGRDSPTREPGALPCA 544
S G S P S P EG S P + P L TP + T PG
Sbjct: 1381 SEGTSMPNSNPSEGTTPLTSIPVSTT---PVVSSEASTLSATPVD-----TSTPGTTSAE 1432
Query: 545 CGQLPDLEDELSLLDPLPRYLKSCQDLIVPEQCRCADTRPGSEQPPLGGAASPEVLA--- 601
P + +S+ P K+ I A++ + + SP V +
Sbjct: 1433 ATSSPTTAEGISIPTSTPSEGKTPLKSIPVSNTPVANSEASTLSTTPVDSNSPVVTSTAV 1492
Query: 602 ---PVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEELQEKGSPAGPPPSQGQPAA 658
P E +A + PS + V T +A + L + P + A+
Sbjct: 1493 SSSPTPAEGTSIAISTPSEGSTALTSIPVSTTTVASSEINSLSTTPAVTSTPVTTYSQAS 1552
Query: 659 RPPKEVPASRLAQQLREEGWNLQTSESLTL-----AEVYLMMGKP--SKLQLEYDWLGPG 711
P + + EG TS ++ +E + P SK Q+
Sbjct: 1553 SSPTTADGTSMQTSTYSEGSTPLTSLPVSTMLVVSSEANTLSTTPIDSKTQVTASTEASS 1612
Query: 712 RQDPRPGSLPTALHKQRLLSCLLKLISTEVNPKLALEANTISTASV-------------- 757
S+ + + S LL I P + EA+T+ST V
Sbjct: 1613 STTAEGSSMTISTPSEG--SPLLTSIPVSTTPVASPEASTLSTTPVDSNSPVITSTEVSS 1670
Query: 758 RPAQEEQSMTPP-----GKVVTVSSRSPRCPRNQASLRSSKTFP-PSSAPCSSGLRNPPR 811
P E + P G+ S P +++ + T P +S P ++
Sbjct: 1671 SPTPAEGTSMPTSTYTEGRTPLTSITVRTTPVASSAISTLSTTPVDNSTPVTTSTEARSS 1730
Query: 812 PLLVPGPSSTGSNDSDGGLFAVPTTLPPNSRHGKLFSPSKEAELTFRQHLNSISMQSDFF 871
P G S S S+G P T P S L S + T ++ ++
Sbjct: 1731 PTTSEGTSMPNSTPSEG---TTPLTSIPVSTTPVLSSEASTLSATPIDTSTPVTTSTEA- 1786
Query: 872 LPKPRKLRNRHLRKPLVVQRTLLPRPSENQSHNVCSFSILSNSSVTGRGSFRPIQSSL-- 929
P + + + P S SH + + S S S T S P+ +S
Sbjct: 1787 TSSPTTAEGTSIPTS-TLSEGMTPLTSTPVSHTLVANSEASTLSTTPVDSNSPVVTSTAV 1845
Query: 930 ---------TKAALSRPIVPKV----LPPQATSHLASAIDLAATSAGILS---------- 966
T A S P +P T+ +S + +T+ + S
Sbjct: 1846 SSSPTPAEGTSIATSTPSEGSTALTSIPVSTTTVASSETNTLSTTPAVTSTPVTTYAQVS 1905
Query: 967 -------GNPLP-ALDTEGLSGIS--PLSSDEVTGA------------------ISGQDS 998
G+ +P + EG ++ P+S+ V + S S
Sbjct: 1906 SSPTTADGSSMPTSTPREGRPPLTSIPVSTTTVASSEINTLSTTLADTRTPVTTYSQASS 1965
Query: 999 TGTHQDGDTLPTVG---GSDPFVSIP-----------SRPEQEPVADSFQGSSVLSLSEL 1044
+ T DG ++PT GS P S+P S PV S ++ S
Sbjct: 1966 SPTTADGTSMPTPAYSEGSTPLTSMPLSTTLVVSSEASTLSTTPVDTSTPATTSTEGSSS 2025
Query: 1045 PKAPLQNGLSIPLSSSESSSTRLSPPDVSALLDISLPG-----PPEDALSQGEPATHISD 1099
P G SI S+ +T L+ VS L +S G P D+ +Q +T S
Sbjct: 2026 PTT--AGGTSIQTSTPSERTTPLAGMPVSTTLVVSSEGNTLSTTPVDSKTQVTNSTEASS 2083
Query: 1100 SII----EIAISSGQYGE----GVPLSPAKLNGSDSSKSLPSPSSSPQPHWIASPTHDPQ 1151
S + IS+ G +PLS + ++S +P S P I S
Sbjct: 2084 SATAEGSSMTISAPSEGSPLLTSIPLSTTPVASPEASTLSTTPVDSNSP-VITSTEVSSS 2142
Query: 1152 WYPSDSTDSSLSSLFASFISPEKSRKMLPTPIGTNSGTSL 1191
P++ T S +S ++ +P S + T + +++ ++L
Sbjct: 2143 PIPTEGT-SMQTSTYSDRRTPLTSMPVSTTVVASSAISTL 2181
Score = 32.3 bits (72), Expect = 3.0
Identities = 54/251 (21%), Positives = 98/251 (39%), Gaps = 40/251 (15%)
Query: 960 TSAGILSGNPLPALDT--------EGLSGIS--PLSSDEVTGAISGQDSTGTHQDGDTLP 1009
T+A S +P A DT EG + ++ P+S+ V + + ST T D T
Sbjct: 425 TTASEASSSPTTAEDTSIATSTPSEGSTPLTSMPVSTTPVASSEASNLST-TPVDSKTQV 483
Query: 1010 TVG----GSDPFVSIPSRPEQEPVADSFQGSSVLSLSELPKAPLQNGLSIPLSSSESSST 1065
T S P + S P P +GS+ L+ + ++P++SSE+S+
Sbjct: 484 TTSTEASSSPPTAEVNSMPTSTPS----EGSTPLTSMSVS--------TMPVASSEASTL 531
Query: 1066 RLSPPDVSALLDISLPGPPEDALSQG---------EPATHISDSIIEIAISSGQYGEGVP 1116
+P D S + S +G E +T +++ + +
Sbjct: 532 STTPVDTSTPVTTSSEASSSSTTPEGTSIPTSTPSEGSTPLTNMPVSTRLVVSSEASTTS 591
Query: 1117 LSPAKLNGSDSSKSLPSPSSSPQPHWIASPTHDPQWYPSDSTDSSLSSLFASFISPEKSR 1176
+PA N ++ S S SSS + PT Y T + S+ + ++ ++
Sbjct: 592 TTPADSNTFVTTSSEAS-SSSTTAEGTSMPT---STYSERGTTITSMSVSTTLVASSEAS 647
Query: 1177 KMLPTPIGTNS 1187
+ TP+ +N+
Sbjct: 648 TLSTTPVDSNT 658
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 49.3 bits (116), Expect = 2e-05
Identities = 105/424 (24%), Positives = 146/424 (34%), Gaps = 56/424 (13%)
Query: 467 GAEGKGVGRPPPAADALQSSGESSPESAPGEGAALSLSSPDAPDR----PPPRHQDTGPC 522
GA G VGR P A A G + PESAP G + S P A R PP ++ GP
Sbjct: 48 GAAG-AVGRKPLAERAGGIGGATIPESAPRAGPTRT-SRPPASGRGERAPPAKNTSPGP- 104
Query: 523 LEKTPAEGRDSPTREPGAL-----------PCACGQLPDLEDELSLLDPLPRYLKS---- 567
+ GR S T PG L A G+ + +L R
Sbjct: 105 ---VSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPG 161
Query: 568 CQDLIVPEQCRCADTRPGSEQPPLGGAASPEVLAPVSK--EAADLAPTGPSP----RPGP 621
+ + R A T G +P P P A++ + T PSP RP
Sbjct: 162 TPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSA 221
Query: 622 GLLLDVCTKDLADAPAEELQE--------KGSPAGPP-PSQGQP----AARPPKEVPASR 668
G L + A L +G+P P PSQ +P A RPP+ P +
Sbjct: 222 GGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRK 281
Query: 669 LAQQLREEGWNLQTSESLTLA-EVYLMMGKPSKLQLEYDWLGPGRQDPRPGSLPTALHKQ 727
A L +S T + P LQ P P T+L
Sbjct: 282 DAAPALGP---LSSSPLATPSPSAPPSPSAPPSLQTL-----PSPPATPPSQATTSLGSP 333
Query: 728 RLLSCLLKLISTEVNPKLALEANTISTASVRPAQEEQSMTPPGKVVTVSSRSPRCPRNQA 787
L + L S ++P ++ P Q S + +++ SP+ P A
Sbjct: 334 TLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALA 393
Query: 788 -SLRSSKTFPPSSAPCSSGLRNPPRPLLVPGPSSTGSNDSDGGLFAVPTTLPPNSRHGKL 846
L + PP S P + P P + PS+T + + L A P +PP+
Sbjct: 394 VHLLQAPFSPPPSPPVQAPFSPPASPPV--SPSATPPSQAPPSLAAPPLQVPPSPPASPP 451
Query: 847 FSPS 850
SPS
Sbjct: 452 MSPS 455
Score = 47.8 bits (112), Expect = 7e-05
Identities = 108/434 (24%), Positives = 146/434 (33%), Gaps = 92/434 (21%)
Query: 456 TARGQVKCPRSGAEGKGVG----RPP----PAADALQSSG--ESSPESAPGEGAALSLSS 505
+ARG + P ++ K G RPP P DA + G SSP + P S S+
Sbjct: 249 SARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATP------SPSA 302
Query: 506 PDAPDRPPPRHQDTGPCLEKTPAEGRDSPTREPGALPCACGQLPDLEDELSLLDPLPRYL 565
P +P P P L+ P+ P P + G P L+ S L P
Sbjct: 303 PPSPSAP--------PSLQTLPS----PPATPPSQATTSLGS-PTLQATHSFLPSPP--- 346
Query: 566 KSCQDLIVPEQCRCADTRPGSEQPPLGGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLL 625
+ P P PPL SP P+S A PSP+ L +
Sbjct: 347 ------LSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLAT------PSPQAPNALAV 394
Query: 626 DVCTKDLADAPAEELQ--------EKGSPAGPPPSQGQPA-ARPPKEVPASRLAQQLREE 676
+ + P+ +Q SP+ PPSQ P+ A PP +VP S A
Sbjct: 395 HLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSP 454
Query: 677 GWNLQTSESLTLAEVYLMMGKPSKLQLEYDWLGPGRQDPRPGSLPTALHKQRLLSCLLKL 736
LA L + KP P + P P P + Q S
Sbjct: 455 SATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSP---PASFPGQAPFS----- 506
Query: 737 ISTEVNPKLALEANTISTASVRPAQEEQSMTPPGKVVTVSSRSPRCPRNQASLRSSKTFP 796
P +L + ++T P Q + P ++ V P P QA R P
Sbjct: 507 ------PSASLPMSPLATP---PPQAPPVLAAP--LLQVPPSPPASPTLQAPRR-----P 550
Query: 797 PSSAPCSS--------GLRNPPRPLLVPGPSSTGSNDSDGGLFAVPTTLPPNSR------ 842
P+ P +S L P P PSST S G + T+ P R
Sbjct: 551 PTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGP 610
Query: 843 -HGKLFSPSKEAEL 855
G SP +AEL
Sbjct: 611 EGGAAASPPPDAEL 624
Score = 36.2 bits (82), Expect = 0.20
Identities = 53/201 (26%), Positives = 69/201 (34%), Gaps = 31/201 (15%)
Query: 476 PPPAADALQSSGESSPESAPGEGAALSLSSPDAPDRPPPRHQDTGPCLEKTPAEGRDSPT 535
P P A S + P AP AA L P + PP P L+ P+ P
Sbjct: 444 PSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPAL--ATPPLQALPSPPASFPG 501
Query: 536 REP----GALPCACGQLPDLEDELSLLDPLPRYLKSCQDLIVPEQCRCADTRPGSEQPPL 591
+ P +LP + P + L PL L VP + T +PP
Sbjct: 502 QAPFSPSASLPMSPLATPPPQAPPVLAAPL---------LQVPPSPPASPTLQAPRRPPT 552
Query: 592 GGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTKDL------ADAPAEELQ---- 641
G P+ + LAP GP P P + DL A + EEL+
Sbjct: 553 PG---PDTSVSGPRLTLALAP-GPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDS 608
Query: 642 --EKGSPAGPPPSQGQPAARP 660
E G+ A PPP A P
Sbjct: 609 GPEGGAAASPPPDAELAACHP 629
Score = 33.5 bits (75), Expect = 1.3
Identities = 40/168 (23%), Positives = 61/168 (36%), Gaps = 27/168 (16%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPP------- 60
G G+ GL+ +A+E G+ + S+G +RD P G P
Sbjct: 118 GPLGQKGLRI----SAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRA 173
Query: 61 ------APPGAPQA-PSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPR 113
P AP A P PP P R SV S+ +P A + G G +
Sbjct: 174 AGTEVGLPRPAPSARPRPPTEGP-------RKSVSSASEHSTTEPSPAARRRPSAGGGLQ 226
Query: 114 GKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGKKVRR 161
+ SS+ +S A + P+ +R + R K +G + R
Sbjct: 227 RPASRSLSSSATPLSSPARSGPS--ARGTPRAPAHPSQPKPKGLQALR 272
Score = 32.7 bits (73), Expect = 2.3
Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 29/106 (27%)
Query: 50 KTPRAGADG--PPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNA 107
+TP A A G P PPG+P+ P P V P + R +G+ A
Sbjct: 15 RTPAARAPGLLTPRPPGSPRPPPP---------------VTPAALR-------VLGAAGA 52
Query: 108 GGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEK 153
G P + A G G ++ + +AP G +SR S GE+
Sbjct: 53 VGRKPLAERAGGIGGAT-----IPESAPRAGPTRTSRPPASGRGER 93
Score = 31.6 bits (70), Expect = 5.0
Identities = 36/129 (27%), Positives = 48/129 (37%), Gaps = 18/129 (13%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQ 67
G DGL + + E + A GA S GT + AGA P +
Sbjct: 657 GPGSADGLCTIYETEGPESATP---APGALDPGPSPGTSGGKAAAGAGAGASSRSPKQAR 713
Query: 68 APSPPQGSPQD---QHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGKGAEGGGSSS 124
P G+ Q QH R+ + A G AGGSG GAEGGG +
Sbjct: 714 LGELPLGALQASVVQHLLSRTLLL------------AAAEGAAGGSGGGPGGAEGGGVTG 761
Query: 125 GNVSGVAPA 133
G + ++ A
Sbjct: 762 GARAALSDA 770
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 49.3 bits (116), Expect = 2e-05
Identities = 33/94 (35%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Query: 52 PRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSG 111
P A A PP PP AP + P G P P + P PP+A +G + G+
Sbjct: 263 PAAPAAAPPPPPPAPATLARPPGHPAG----------PPTAAPAVPPPAAAQNGGSAGAA 312
Query: 112 PRGKGAEGG--GSSSGNVSGVAPAAPAGGSRSSS 143
P A GG G S G A AAPA G ++ S
Sbjct: 313 PAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAES 346
Score = 43.9 bits (102), Expect = 0.001
Identities = 55/218 (25%), Positives = 78/218 (35%), Gaps = 38/218 (17%)
Query: 450 IQSGQGTARGQVKCPRSGAEGKGVGRPPPAADALQSSGESSPESAPGEGAALSLSSPDAP 509
+ +G +++ P G+ G P PAA A+ + E +P +L++ P
Sbjct: 115 VPAGPAPPAAKLRPPPEGSAGSCA--PVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGP 172
Query: 510 DRPPPRHQDTGPCLEKTPAEGRDSPTREPGAL----PCACGQLPDLEDELSLLDPLPRYL 565
P GP K G AL A + + + + L PLP+
Sbjct: 173 GPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPK-- 230
Query: 566 KSCQDLIVPEQCRCADTRPGS--EQPPLGGAASPEVLAPVSKEAADLAPTGPSPRPGPGL 623
PG+ + PP GAA+P A S AA AP P+ P P
Sbjct: 231 ---------------PAAPGTVIQTPPFVGAAAPPAPAAPSPPAAP-APAAPAAAPPPP- 273
Query: 624 LLDVCTKDLADAPAEELQEKGSPAGPPPSQGQPAARPP 661
APA + G PAGPP + PA PP
Sbjct: 274 ---------PPAPATLARPPGHPAGPPTA--APAVPPP 300
Score = 37.0 bits (84), Expect = 0.12
Identities = 53/198 (26%), Positives = 63/198 (31%), Gaps = 54/198 (27%)
Query: 460 QVKCPRSGAEGKGVGRPPPAADALQSSGESSPESAPGEGAALSLSSPDAPDRPPP----R 515
+V+ +GA G V PA A + +AP EGA P A PPP R
Sbjct: 49 EVRAAAAGALGNHVVSGSPAGAA------GAGPAAPAEGA------PGAAPEPPPAGRAR 96
Query: 516 HQDTGPCLEKTPAEGRDSPTREPGALPCACGQLPDLEDELSLLDPLPRYLKSCQDLIVPE 575
GP P+ R P G P A P E P+P
Sbjct: 97 PGGGGPQRPGPPSPRR--PLVPAGPAPPAAKLRPPPEGSAGSCAPVPA------------ 142
Query: 576 QCRCADTRPGSEQPPLGGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADA 635
A G E P G A P A ++ A GP P PGPG
Sbjct: 143 ---AAAVAAGPEPAP-AGPAKPAGPAALAARAGPGPGPGPGPGPGPG------------- 185
Query: 636 PAEELQEKGSPAGPPPSQ 653
G PAGP +Q
Sbjct: 186 -------PGKPAGPGAAQ 196
Score = 35.0 bits (79), Expect = 0.46
Identities = 51/226 (22%), Positives = 75/226 (33%), Gaps = 17/226 (7%)
Query: 449 GIQSGQGTARGQVKCPRSGAEGKGVGRPPPAADALQSSGESSPESAPGEGAALSLSSPDA 508
G +G TA V P + G G P A A + G + PG GAA + +P
Sbjct: 285 GHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPA--AGGPAGVSGQPGPGAAAAAPAPGV 342
Query: 509 PDRPPPR-HQDTGPCLEKTPAEGRDSPTREPGALPCACGQLPDLEDELSLLDPLPRYLKS 567
P R Q P + A G S P G LP ++ P P
Sbjct: 343 KAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALP---SPAAVPPPAPGTPTG 399
Query: 568 CQDLIVPEQCRCADTRPGSEQPPLGGAASPEVLA---------PVSKEAADLAPTGPSPR 618
+ P + + +P VLA P + + L P R
Sbjct: 400 LPKGAAGAVTQSLSRTPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVR 459
Query: 619 PGPGLLLDVCTKDLADAPAEELQEKGSPAGPPPSQGQPAARPPKEV 664
G LL + + LA A+ + + P P+ P + PP ++
Sbjct: 460 SENGQLLMIPQQALAQMQAQAHAQPQTTMAPRPA--TPTSAPPVQI 503
>gi|239508790 PREDICTED: hypothetical protein, partial [Homo sapiens]
Length = 490
Score = 48.9 bits (115), Expect = 3e-05
Identities = 72/279 (25%), Positives = 101/279 (36%), Gaps = 32/279 (11%)
Query: 923 RPIQSSLTKAALSRPI-VPKVL------PPQATSHLASAIDLAATSAGILSGNPLPALDT 975
RP+ S L S P VP +L P +S + L + +LSG P P D
Sbjct: 104 RPLVSPLLSGVPSPPSDVPSLLSGVPSLPSDVSSPPSDVPSLLSDVPSLLSGVPSPPSDV 163
Query: 976 EGLSGISPLSSDEVTGAISGQDSTGTHQDGDTLPTVGGSDPFVSIPSRPEQEPVADSFQG 1035
P +V +SG S P P +PS P P+
Sbjct: 164 PSPPSDVPSPPSDVPSLLSGVPS----------PPSDVPSPPSDVPSPPSDVPLLSDVPS 213
Query: 1036 --SSVLSLSELPKAPLQNGLSIPLSSSESSSTRLSPPDVSALLDISLPGPPEDALSQGEP 1093
S V LS++P P + S+P S P DV +LL +P PP D +
Sbjct: 214 PPSDVPLLSDVPSPP-SDVPSLPSDVPSLSGVPSPPSDVPSLLS-GVPSPPSDISPPSDV 271
Query: 1094 ATHISDSIIEIAISSGQYGEGVPLSPAKLNGSDSS-----KSLPSPSSS-PQPHWIASPT 1147
+ +SD + + GVP P+ + S +PSP S P + SP
Sbjct: 272 PSLLSD-VPSLPSDVPSLLSGVPSPPSDVPSLLSDVPSPPSDVPSPPSDIPLLSGVPSPP 330
Query: 1148 HD----PQWYPSDSTDSSLSSLFASFISPEKSRKMLPTP 1182
D P PS +D L S S +S +P+P
Sbjct: 331 SDVPSPPSDVPSPPSDVPLLSGVPSPLSDVPLLSGVPSP 369
Score = 38.1 bits (87), Expect = 0.054
Identities = 81/323 (25%), Positives = 113/323 (34%), Gaps = 69/323 (21%)
Query: 514 PRHQDTGPCLEKTPAEGRDSPTREPG--ALPCACGQLPDLEDELSLLDPLPRYLKSCQDL 571
P P L P+ D P+ G +LP P D SLL +P L
Sbjct: 102 PHRPLVSPLLSGVPSPPSDVPSLLSGVPSLPSDVSSPPS--DVPSLLSDVPSLLSG---- 155
Query: 572 IVPEQCRCADTRPGSEQPPLGGAASPEVLAPVSKEAADLAPTGPSPRPGPG----LLLDV 627
VP + P P P +L+ V +D+ P+ PS P P LL DV
Sbjct: 156 -VPSPPSDVPSPPSDVPSPPSDV--PSLLSGVPSPPSDV-PSPPSDVPSPPSDVPLLSDV 211
Query: 628 CTKD-----LADAPAEELQEKGSPAGPPPSQGQPAARPPKEVPASRLAQQLREEGWNLQT 682
+ L+D P+ P+ P G P+ PP +VP+
Sbjct: 212 PSPPSDVPLLSDVPSPPSDVPSLPSDVPSLSGVPS--PPSDVPS---------------- 253
Query: 683 SESLTLAEVYLMMGKPSKLQLEYDWLGPGRQDPRPGSLPTALHK-QRLLSCLLKLISTEV 741
L+ G PS P P +P+ L L S + L+S
Sbjct: 254 ----------LLSGVPS----------PPSDISPPSDVPSLLSDVPSLPSDVPSLLSGVP 293
Query: 742 NPKLALEANTISTASVRPAQEEQSMTPPGKVVTVSSRSPRCPRNQASLRSSKTFPPSSAP 801
+P ++ S S P+ +PP + +S P P + S S PPS P
Sbjct: 294 SPP----SDVPSLLSDVPSPPSDVPSPPSDIPLLSG-VPSPPSDVPSPPSDVPSPPSDVP 348
Query: 802 CSSGLRNP--PRPLL--VPGPSS 820
SG+ +P PLL VP P S
Sbjct: 349 LLSGVPSPLSDVPLLSGVPSPPS 371
>gi|156616290 collagen type VI alpha 6 [Homo sapiens]
Length = 2263
Score = 48.1 bits (113), Expect = 5e-05
Identities = 50/157 (31%), Positives = 62/157 (39%), Gaps = 20/157 (12%)
Query: 7 DGGSGEDGLKKL-GKRAADEESLEGE-GAGGADAAEESSGTKRDEKTPRAGADGPPAPPG 64
+G G G + G R A + L G+ GA G D++ E + E+ R G G P PPG
Sbjct: 1487 EGSQGSPGKRGTPGDRGA--KGLRGDPGAPGVDSSIEGPTGLKGERG-RQGRRGWPGPPG 1543
Query: 65 APQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGS-GNAGGSGPRG----KGAEG 119
P + H R PQ P GS G G GPRG KG +G
Sbjct: 1544 TPGSRRKTAA------HGRRGHTGPQGTAGIPGPDGLEGSLGLKGPQGPRGEAGVKGEKG 1597
Query: 120 GGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEG 156
G S G P GG + LGS G + E G
Sbjct: 1598 GVGSKGPQGPPGP----GGEAGNQGRLGSQGNKGEPG 1630
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 48.1 bits (113), Expect = 5e-05
Identities = 52/189 (27%), Positives = 71/189 (37%), Gaps = 20/189 (10%)
Query: 473 VGRPPPAADALQSSGESSPESAPGEGAALSLSSPDAPDRPPPRHQDTGPCLEKTPAEGRD 532
V P PA + SSP ++ AL + P +PD PPP P P
Sbjct: 797 VASPEPAGPSGSPELVSSPAASSSSATALQIQPPGSPD-PPPAPPAPAPA-SSAPGHVAK 854
Query: 533 SPTREPGALPCACGQLPDLED-ELSLLDPLPRYLKSCQDLIVPEQCRCADTRPGSEQPPL 591
P +EP + C+ G P ED L+ P L+ + R G+ P L
Sbjct: 855 LPQKEP--VGCSKGGGPPREDVGAPLVTP---------SLLQMVRLRSVGAPGGAPTPAL 903
Query: 592 GGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEELQEKGSPAGPPP 651
G +A + L A P P P GL V K + A +E L P GPP
Sbjct: 904 GPSAPQKPLRRALSGRA-----SPVPAPSSGLHAAVRLKACSLAASEGL-SSAQPNGPPE 957
Query: 652 SQGQPAARP 660
++ +P P
Sbjct: 958 AEPRPPQSP 966
Score = 42.0 bits (97), Expect = 0.004
Identities = 89/340 (26%), Positives = 120/340 (35%), Gaps = 65/340 (19%)
Query: 476 PPPAADALQSSGESSPESAPGEGAALSLSSPDAPDRPPPRHQDTGPCLEKTPAEGRDS-- 533
P PAA AL ++P PG +S+ DA + PP Q T L+++P +D
Sbjct: 680 PNPAAPAL-----AAPAVVPGP-----VSTTDASPQSPPTPQTTLTPLQESPVISKDQSP 729
Query: 534 -------------PTREPGALPCACGQLPDLEDELSLLD--PLPRYLKSCQDLIVPEQCR 578
PT++P + A E+ L + P P QDL +
Sbjct: 730 PPSPPPSYHPPPPPTKKPEVVVEAPSASETAEEPLQDPNWPPPPPPAPEEQDLSM----- 784
Query: 579 CADTRPGSEQPPLGGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAE 638
AD P E ASPE P GPS P L+ + A A
Sbjct: 785 -ADFPPPEEA--FFSVASPE-------------PAGPSGSPE---LVSSPAASSSSATAL 825
Query: 639 ELQEKGSPAGPPPSQGQPAARPPKEVPAS----RLAQQLREEGWNLQTSESLTLAEVYLM 694
++Q GSP PPP+ PP PAS +A+ ++E +V
Sbjct: 826 QIQPPGSP-DPPPA-------PPAPAPASSAPGHVAKLPQKEPVGCSKGGGPPREDVGAP 877
Query: 695 MGKPSKLQL-EYDWLGPGRQDPRPGSLPTALHKQRLLSCLLKLISTEVNPKLALEANTIS 753
+ PS LQ+ +G P P P+A K L L S P L A
Sbjct: 878 LVTPSLLQMVRLRSVGAPGGAPTPALGPSAPQKP-LRRALSGRASPVPAPSSGLHAAVRL 936
Query: 754 TASVRPAQEEQSMTPPGKVVTVSSRSPRCPRNQASLRSSK 793
A A E S P R P+ P + AS SK
Sbjct: 937 KACSLAASEGLSSAQPNGPPEAEPRPPQSPASTASFIFSK 976
Score = 35.8 bits (81), Expect = 0.27
Identities = 156/744 (20%), Positives = 245/744 (32%), Gaps = 123/744 (16%)
Query: 465 RSGAEGKGVGRPPPAADALQ-SSGESSPESAPGEGAALSLSSPDAP-------DRPPPRH 516
R+ E G R P A DA++ + + P G GA +SL + +A + RH
Sbjct: 236 RNEREAPGTPRAPGARDAVRIPTVDGRPRGTSGMGARVSLQALEAEAEAGAETEAMLQRH 295
Query: 517 QDTGPCLEKTPAEGRDSPTREPGALPCACGQLPDLEDELSLLDPLPRYLKSCQDLIVPEQ 576
D GR + TR P +P L +PL + I P+
Sbjct: 296 IDR--VYRDDTFVGRSTGTRAPPLTRPMSLAVPGLTGGAGPAEPLSPAMS-----ISPQA 348
Query: 577 CRCADTRPGSEQPPLG-----GAASPEVLAPVSKEAADLAP----------TGPSPRPG- 620
+ P + PP G S L+ S +A A + P PR
Sbjct: 349 TYLSKLIPHAVLPPTVDVVALGRCSLRTLSRCSLHSASPASVRSLGRFSSVSSPQPRSRH 408
Query: 621 PGLLLDVCT----KDLADAPAEELQEKGSPAGPPPSQ-GQPAARPPKEVPASRLAQQLRE 675
P D + D + L KG G P S + PP + + R +
Sbjct: 409 PSSSSDTWSHSQSSDTIVSDGSTLSSKGGSEGQPESSTASNSVVPPPQGGSGRGSPS--- 465
Query: 676 EGWNLQTSESLTLAEVYLMMGKPSKLQLEYDWLGPGRQDPRPGSLPTALHKQRLLSC--- 732
G + S++L++ + G+ L+ ++ P P +LH++ L
Sbjct: 466 GGSTAEASDTLSIRSSGQLSGRSVSLRKL-------KRPPPPPRRTHSLHQRGLAVPDGP 518
Query: 733 --LLKLISTEVNPKLALEANTIST----ASVRPAQEEQSMTPPGKVVTVSSRSPRCPRNQ 786
L + P+L T + A+ P S P G S R PR P
Sbjct: 519 LGLPPKPERKQQPQLPRPPTTGGSEGAGAAPCPPNPANSWVP-GLSPGGSRRPPRSPERT 577
Query: 787 ASLRS-------SKTFPP---SSAPCSSGLRNPPRPLLVPGPSSTGSNDSDG--GLFAVP 834
S S + T PP + P S G PP+P V S G++ S L +
Sbjct: 578 LSPSSGYSSQSGTPTLPPKGLAGPPASPGKAQPPKPERVTSLRSPGASVSSSLTSLCSSS 637
Query: 835 TTLPPNSRHGKLFSPSKEAELTFRQHLNSISMQSDFFLPKPRKLRNRHLRKPLVVQRTLL 894
+ P+ R G P L R + F P P K R+ + P + ++
Sbjct: 638 SDPAPSDRSG----PQILTPLGDRFVIPPHPKVPAPFSPPPSKPRSPNPAAPALAAPAVV 693
Query: 895 PRPSENQSHNVCSFSILSNSSVTGRGSFRPIQSS--LTKAALSRPIVPKVLPPQATSHLA 952
P P V + S T + + P+Q S ++K P P P
Sbjct: 694 PGP-------VSTTDASPQSPPTPQTTLTPLQESPVISKDQSPPPSPPPSYHPPPPPTKK 746
Query: 953 SAIDLAATSAGILSGNPL----------PALDTEGLSGISPLSSDEVTGAISGQDSTGTH 1002
+ + A SA + PL PA + + LS +E +++ + G
Sbjct: 747 PEVVVEAPSASETAEEPLQDPNWPPPPPPAPEEQDLSMADFPPPEEAFFSVASPEPAGP- 805
Query: 1003 QDGDTLPTVGGSDPFVSIPSRPEQEPVADSFQGSSVLSLSELPKAPLQNGLSIPLSSSES 1062
GS VS P+ A Q P AP P SS+
Sbjct: 806 ---------SGSPELVSSPAASSSSATALQIQPPGSPDPPPAPPAP------APASSAPG 850
Query: 1063 SSTRLSPPDVSALLDISLPGPPEDALSQGEPATHISDSIIEI----------AISSGQYG 1112
+L P + GPP + + A ++ S++++ + G
Sbjct: 851 HVAKL--PQKEPVGCSKGGGPPREDVG----APLVTPSLLQMVRLRSVGAPGGAPTPALG 904
Query: 1113 EGVPLSPAKLNGSDSSKSLPSPSS 1136
P P + S + +P+PSS
Sbjct: 905 PSAPQKPLRRALSGRASPVPAPSS 928
Score = 32.3 bits (72), Expect = 3.0
Identities = 26/80 (32%), Positives = 32/80 (40%), Gaps = 19/80 (23%)
Query: 38 AAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKD 97
AA SS T + P G P PP AP AP+P +P +K P+K+
Sbjct: 816 AASSSSATALQIQPP-----GSPDPPPAPPAPAPASSAPGH-----------VAKLPQKE 859
Query: 98 PPSAVGSGNAGGSGPRGKGA 117
P VG GG GA
Sbjct: 860 P---VGCSKGGGPPREDVGA 876
>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
sapiens]
Length = 1818
Score = 47.8 bits (112), Expect = 7e-05
Identities = 44/165 (26%), Positives = 59/165 (35%), Gaps = 18/165 (10%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPPAPPG--A 65
G +GE G + + + G G+ A +G + T +G DGPP PPG
Sbjct: 874 GANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGT--SGGDGPPGPPGERG 931
Query: 66 PQAPSPPQGSPQDQ-------------HHFLRSSVRPQSKRPRKDPPSAVG-SGNAGGSG 111
PQ P P G P + H R Q K P VG G G +G
Sbjct: 932 PQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETG 991
Query: 112 PRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEG 156
P G+ G G+ AA G++ G SG + G
Sbjct: 992 PIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAG 1036
Score = 45.4 bits (106), Expect = 3e-04
Identities = 56/164 (34%), Positives = 61/164 (37%), Gaps = 26/164 (15%)
Query: 7 DGGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTP-RAGADGPPAPPG- 64
DG GEDG ++G R G G GT P AG DGPP P G
Sbjct: 642 DGMRGEDG--EIGPRGLP-------GEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGN 692
Query: 65 -APQA-PSPP--QGSPQDQHHFLRSSVRPQSKRPRKDPPSAVG-SGNAGGSGPRG-KGAE 118
PQ P PP QG+P Q L P K P G +G G GP G G E
Sbjct: 693 MGPQGEPGPPGQQGNPGPQG--LPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKE 750
Query: 119 GGGSSSGNVSGVAPAAPAG--GSR-----SSSRNLGSSGGEKEE 155
G G + P P G G R R L S GEK E
Sbjct: 751 GQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGE 794
Score = 43.9 bits (102), Expect = 0.001
Identities = 39/152 (25%), Positives = 58/152 (38%), Gaps = 21/152 (13%)
Query: 6 GDGGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDE-KTPRAGADGPPAPPG 64
GDG G G + + + DE + G G + G ++ + G GPP PPG
Sbjct: 1178 GDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPG 1237
Query: 65 APQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGKGAEGGGSSS 124
P+ P P G+ Q PP +VGS GG G +G+ E G
Sbjct: 1238 -PRGPQGPNGADGPQ-----------------GPPGSVGS--VGGVGEKGEPGEAGNPGP 1277
Query: 125 GNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEG 156
+GV G + + G++G +G
Sbjct: 1278 PGEAGVGGPKGERGEKGEAGPPGAAGPPGAKG 1309
Score = 43.9 bits (102), Expect = 0.001
Identities = 41/156 (26%), Positives = 58/156 (37%), Gaps = 15/156 (9%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTP-RAGADGPP---APP 63
G GE G + + G G + G ++ P AG DGPP PP
Sbjct: 1390 GAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPP 1449
Query: 64 GAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGK-GAEGGGS 122
G P P + H L + P ++ K G+ G G +G GA+G G
Sbjct: 1450 GLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEK--------GDRGLPGTQGSPGAKGDGG 1501
Query: 123 SSGNVSGVAPAAPAG--GSRSSSRNLGSSGGEKEEG 156
G + P P G G + N GS+G ++G
Sbjct: 1502 IPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKG 1537
Score = 41.2 bits (95), Expect = 0.006
Identities = 40/134 (29%), Positives = 52/134 (38%), Gaps = 19/134 (14%)
Query: 32 GAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQS 91
GA GA+ + G K + AGA+GPP G P P P G P + LR P
Sbjct: 1378 GAAGAEGRQGEKGAKGE-----AGAEGPPGKTG-PVGPQGPAGKPGPEG--LRGIPGPVG 1429
Query: 92 KRPRKDPPSAVGSGNAGGSGPRG----KGAEGGGSSSGNVSGVAPAAPAG-----GSRSS 142
++ P +A G G GP G KG G G+ + P G G R
Sbjct: 1430 EQGL--PGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGL 1487
Query: 143 SRNLGSSGGEKEEG 156
GS G + + G
Sbjct: 1488 PGTQGSPGAKGDGG 1501
Score = 40.4 bits (93), Expect = 0.011
Identities = 31/133 (23%), Positives = 43/133 (32%), Gaps = 4/133 (3%)
Query: 30 GEGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRP 89
G+G+ G + + + + + R GPP P G P P G P
Sbjct: 513 GDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGP 572
Query: 90 QSKRPRKDPPSAVGS----GNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRN 145
Q R + PP G G G G RG E G G+ G R
Sbjct: 573 QGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGP 632
Query: 146 LGSSGGEKEEGKK 158
G G ++G +
Sbjct: 633 QGPPGPPGDDGMR 645
Score = 38.1 bits (87), Expect = 0.054
Identities = 32/108 (29%), Positives = 40/108 (37%), Gaps = 28/108 (25%)
Query: 32 GAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQS 91
G G + G K ++ P G GPP P G P PP
Sbjct: 1333 GEPGPAGQDGVGGDKGEDGDP--GQPGPPGPSGEAGPPGPPG------------------ 1372
Query: 92 KRPRKDPPSAVGS-GNAGGSGPRGK-GAEGGGSSSGNVSGVAPAAPAG 137
++ PP A G+ G G G +G+ GAEG G V P PAG
Sbjct: 1373 ---KRGPPGAAGAEGRQGEKGAKGEAGAEG---PPGKTGPVGPQGPAG 1414
Score = 37.4 bits (85), Expect = 0.092
Identities = 40/147 (27%), Positives = 50/147 (34%), Gaps = 22/147 (14%)
Query: 25 EESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPP-----QGSPQDQ 79
E+ GE E G + E+ + G GPP G P A PP +G+P
Sbjct: 1265 EKGEPGEAGNPGPPGEAGVGGPKGERGEK-GEAGPPGAAGPPGAKGPPGDDGPKGNPGPV 1323
Query: 80 HHFLRSSVRPQSKRPRKDPPSA----VGS-----GNAGGSGPRGKGAEGGGSSSGNVSGV 130
P P +P A VG G+ G GP G E G G
Sbjct: 1324 GF-------PGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGP 1376
Query: 131 APAAPAGGSRSSSRNLGSSGGEKEEGK 157
AA A G + G +G E GK
Sbjct: 1377 PGAAGAEGRQGEKGAKGEAGAEGPPGK 1403
Score = 36.2 bits (82), Expect = 0.20
Identities = 44/155 (28%), Positives = 57/155 (36%), Gaps = 21/155 (13%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTP-RAGADGPPAPPGAP 66
G G GLK E G G+ S+GT P R G GPP P G
Sbjct: 1048 GAQGAPGLK------GGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEK 1101
Query: 67 QAPSP--PQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGK-GAEGGGSS 123
AP PQG + R + P P A +G+ G G +G+ G G S
Sbjct: 1102 GAPGEKGPQG----------PAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGS 1151
Query: 124 SGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGKK 158
G+ P P G + G +GG+ E G +
Sbjct: 1152 KGDKGENGPPGPP-GLQGPVGAPGIAGGDGEPGPR 1185
Score = 34.7 bits (78), Expect = 0.60
Identities = 48/188 (25%), Positives = 59/188 (31%), Gaps = 31/188 (16%)
Query: 6 GDGGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSG-------TKRDEKTPRAGADG 58
G G GE G K G+ A E + EG G G T G G
Sbjct: 430 GHGAYGEKGQK--GEPAVVEPGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPG 487
Query: 59 PPAPPGAPQAPSPP---------------QGSPQDQHHFLRSSVRPQSKRPRKDPPSAVG 103
P PGA P PP +G ++ Q++ + PP +G
Sbjct: 488 RPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMG 547
Query: 104 ----SGNAGGSGPRGKGAEGGGSSSGNVSGV-APAAPAG--GSRSSSRNLGSSGGEKEEG 156
G GG G G E G GV P P G G R G G E G
Sbjct: 548 LTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPG 607
Query: 157 KKVRRQWE 164
K R ++
Sbjct: 608 AKGDRGFD 615
Score = 32.3 bits (72), Expect = 3.0
Identities = 44/170 (25%), Positives = 61/170 (35%), Gaps = 31/170 (18%)
Query: 8 GGSGEDGLK-KLGKRAADEESLEGE----GAGGADAAEESSGTKRDEKTPRAGADGPPAP 62
G G+DGL G+R E +G+ G GG + +G +T G G P P
Sbjct: 949 GPPGKDGLPGHPGQRG--ETGFQGKTGPPGPGGVVGPQGPTG-----ETGPIGERGHPGP 1001
Query: 63 PGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDP------------PSAVGS-GNAGG 109
PG P P + ++ + PQ + P P A G+ G GG
Sbjct: 1002 PGPPGEQGLPGAAGKEG---AKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGG 1058
Query: 110 SGPRG-KGAEGGGSSSGNVSGVAPAAPAG--GSRSSSRNLGSSGGEKEEG 156
GP+G G G G+ P G G + G G E+G
Sbjct: 1059 EGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKG 1108
Score = 30.8 bits (68), Expect = 8.6
Identities = 25/78 (32%), Positives = 27/78 (34%), Gaps = 7/78 (8%)
Query: 467 GAEGK----GVGRPPPAADALQSSGESSPESAPGEGAALSLSSPDAPDRPPPRHQDTG-P 521
GA G+ GV PP + GE P G L P P PP G P
Sbjct: 673 GAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKP 732
Query: 522 CLEKTPAEGRDSPTREPG 539
L P G D P PG
Sbjct: 733 GLAGLP--GADGPPGHPG 748
>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
sapiens]
Length = 1767
Score = 47.8 bits (112), Expect = 7e-05
Identities = 44/165 (26%), Positives = 59/165 (35%), Gaps = 18/165 (10%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPPAPPG--A 65
G +GE G + + + G G+ A +G + T +G DGPP PPG
Sbjct: 823 GANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGT--SGGDGPPGPPGERG 880
Query: 66 PQAPSPPQGSPQDQ-------------HHFLRSSVRPQSKRPRKDPPSAVG-SGNAGGSG 111
PQ P P G P + H R Q K P VG G G +G
Sbjct: 881 PQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETG 940
Query: 112 PRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEG 156
P G+ G G+ AA G++ G SG + G
Sbjct: 941 PIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAG 985
Score = 45.4 bits (106), Expect = 3e-04
Identities = 56/164 (34%), Positives = 61/164 (37%), Gaps = 26/164 (15%)
Query: 7 DGGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTP-RAGADGPPAPPG- 64
DG GEDG ++G R G G GT P AG DGPP P G
Sbjct: 591 DGMRGEDG--EIGPRGLP-------GEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGN 641
Query: 65 -APQA-PSPP--QGSPQDQHHFLRSSVRPQSKRPRKDPPSAVG-SGNAGGSGPRG-KGAE 118
PQ P PP QG+P Q L P K P G +G G GP G G E
Sbjct: 642 MGPQGEPGPPGQQGNPGPQG--LPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKE 699
Query: 119 GGGSSSGNVSGVAPAAPAG--GSR-----SSSRNLGSSGGEKEE 155
G G + P P G G R R L S GEK E
Sbjct: 700 GQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGE 743
Score = 43.9 bits (102), Expect = 0.001
Identities = 39/152 (25%), Positives = 58/152 (38%), Gaps = 21/152 (13%)
Query: 6 GDGGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDE-KTPRAGADGPPAPPG 64
GDG G G + + + DE + G G + G ++ + G GPP PPG
Sbjct: 1127 GDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPG 1186
Query: 65 APQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGKGAEGGGSSS 124
P+ P P G+ Q PP +VGS GG G +G+ E G
Sbjct: 1187 -PRGPQGPNGADGPQ-----------------GPPGSVGS--VGGVGEKGEPGEAGNPGP 1226
Query: 125 GNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEG 156
+GV G + + G++G +G
Sbjct: 1227 PGEAGVGGPKGERGEKGEAGPPGAAGPPGAKG 1258
Score = 43.9 bits (102), Expect = 0.001
Identities = 41/156 (26%), Positives = 58/156 (37%), Gaps = 15/156 (9%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTP-RAGADGPP---APP 63
G GE G + + G G + G ++ P AG DGPP PP
Sbjct: 1339 GAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPP 1398
Query: 64 GAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGK-GAEGGGS 122
G P P + H L + P ++ K G+ G G +G GA+G G
Sbjct: 1399 GLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEK--------GDRGLPGTQGSPGAKGDGG 1450
Query: 123 SSGNVSGVAPAAPAG--GSRSSSRNLGSSGGEKEEG 156
G + P P G G + N GS+G ++G
Sbjct: 1451 IPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKG 1486
Score = 41.2 bits (95), Expect = 0.006
Identities = 40/134 (29%), Positives = 52/134 (38%), Gaps = 19/134 (14%)
Query: 32 GAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQS 91
GA GA+ + G K + AGA+GPP G P P P G P + LR P
Sbjct: 1327 GAAGAEGRQGEKGAKGE-----AGAEGPPGKTG-PVGPQGPAGKPGPEG--LRGIPGPVG 1378
Query: 92 KRPRKDPPSAVGSGNAGGSGPRG----KGAEGGGSSSGNVSGVAPAAPAG-----GSRSS 142
++ P +A G G GP G KG G G+ + P G G R
Sbjct: 1379 EQGL--PGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGL 1436
Query: 143 SRNLGSSGGEKEEG 156
GS G + + G
Sbjct: 1437 PGTQGSPGAKGDGG 1450
Score = 40.4 bits (93), Expect = 0.011
Identities = 31/133 (23%), Positives = 43/133 (32%), Gaps = 4/133 (3%)
Query: 30 GEGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRP 89
G+G+ G + + + + + R GPP P G P P G P
Sbjct: 462 GDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGP 521
Query: 90 QSKRPRKDPPSAVGS----GNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRN 145
Q R + PP G G G G RG E G G+ G R
Sbjct: 522 QGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGP 581
Query: 146 LGSSGGEKEEGKK 158
G G ++G +
Sbjct: 582 QGPPGPPGDDGMR 594
Score = 38.1 bits (87), Expect = 0.054
Identities = 32/108 (29%), Positives = 40/108 (37%), Gaps = 28/108 (25%)
Query: 32 GAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQS 91
G G + G K ++ P G GPP P G P PP
Sbjct: 1282 GEPGPAGQDGVGGDKGEDGDP--GQPGPPGPSGEAGPPGPPG------------------ 1321
Query: 92 KRPRKDPPSAVGS-GNAGGSGPRGK-GAEGGGSSSGNVSGVAPAAPAG 137
++ PP A G+ G G G +G+ GAEG G V P PAG
Sbjct: 1322 ---KRGPPGAAGAEGRQGEKGAKGEAGAEG---PPGKTGPVGPQGPAG 1363
Score = 37.4 bits (85), Expect = 0.092
Identities = 40/147 (27%), Positives = 50/147 (34%), Gaps = 22/147 (14%)
Query: 25 EESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPP-----QGSPQDQ 79
E+ GE E G + E+ + G GPP G P A PP +G+P
Sbjct: 1214 EKGEPGEAGNPGPPGEAGVGGPKGERGEK-GEAGPPGAAGPPGAKGPPGDDGPKGNPGPV 1272
Query: 80 HHFLRSSVRPQSKRPRKDPPSA----VGS-----GNAGGSGPRGKGAEGGGSSSGNVSGV 130
P P +P A VG G+ G GP G E G G
Sbjct: 1273 GF-------PGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGP 1325
Query: 131 APAAPAGGSRSSSRNLGSSGGEKEEGK 157
AA A G + G +G E GK
Sbjct: 1326 PGAAGAEGRQGEKGAKGEAGAEGPPGK 1352
Score = 36.2 bits (82), Expect = 0.20
Identities = 44/155 (28%), Positives = 57/155 (36%), Gaps = 21/155 (13%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTP-RAGADGPPAPPGAP 66
G G GLK E G G+ S+GT P R G GPP P G
Sbjct: 997 GAQGAPGLK------GGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEK 1050
Query: 67 QAPSP--PQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGK-GAEGGGSS 123
AP PQG + R + P P A +G+ G G +G+ G G S
Sbjct: 1051 GAPGEKGPQG----------PAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGS 1100
Query: 124 SGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGKK 158
G+ P P G + G +GG+ E G +
Sbjct: 1101 KGDKGENGPPGPP-GLQGPVGAPGIAGGDGEPGPR 1134
Score = 34.7 bits (78), Expect = 0.60
Identities = 48/188 (25%), Positives = 59/188 (31%), Gaps = 31/188 (16%)
Query: 6 GDGGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSG-------TKRDEKTPRAGADG 58
G G GE G K G+ A E + EG G G T G G
Sbjct: 379 GHGAYGEKGQK--GEPAVVEPGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPG 436
Query: 59 PPAPPGAPQAPSPP---------------QGSPQDQHHFLRSSVRPQSKRPRKDPPSAVG 103
P PGA P PP +G ++ Q++ + PP +G
Sbjct: 437 RPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMG 496
Query: 104 ----SGNAGGSGPRGKGAEGGGSSSGNVSGV-APAAPAG--GSRSSSRNLGSSGGEKEEG 156
G GG G G E G GV P P G G R G G E G
Sbjct: 497 LTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPG 556
Query: 157 KKVRRQWE 164
K R ++
Sbjct: 557 AKGDRGFD 564
Score = 32.3 bits (72), Expect = 3.0
Identities = 44/170 (25%), Positives = 61/170 (35%), Gaps = 31/170 (18%)
Query: 8 GGSGEDGLK-KLGKRAADEESLEGE----GAGGADAAEESSGTKRDEKTPRAGADGPPAP 62
G G+DGL G+R E +G+ G GG + +G +T G G P P
Sbjct: 898 GPPGKDGLPGHPGQRG--ETGFQGKTGPPGPGGVVGPQGPTG-----ETGPIGERGHPGP 950
Query: 63 PGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDP------------PSAVGS-GNAGG 109
PG P P + ++ + PQ + P P A G+ G GG
Sbjct: 951 PGPPGEQGLPGAAGKEG---AKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGG 1007
Query: 110 SGPRG-KGAEGGGSSSGNVSGVAPAAPAG--GSRSSSRNLGSSGGEKEEG 156
GP+G G G G+ P G G + G G E+G
Sbjct: 1008 EGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKG 1057
Score = 30.8 bits (68), Expect = 8.6
Identities = 25/78 (32%), Positives = 27/78 (34%), Gaps = 7/78 (8%)
Query: 467 GAEGK----GVGRPPPAADALQSSGESSPESAPGEGAALSLSSPDAPDRPPPRHQDTG-P 521
GA G+ GV PP + GE P G L P P PP G P
Sbjct: 622 GAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKP 681
Query: 522 CLEKTPAEGRDSPTREPG 539
L P G D P PG
Sbjct: 682 GLAGLP--GADGPPGHPG 697
>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
sapiens]
Length = 1806
Score = 47.8 bits (112), Expect = 7e-05
Identities = 44/165 (26%), Positives = 59/165 (35%), Gaps = 18/165 (10%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPPAPPG--A 65
G +GE G + + + G G+ A +G + T +G DGPP PPG
Sbjct: 862 GANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGT--SGGDGPPGPPGERG 919
Query: 66 PQAPSPPQGSPQDQ-------------HHFLRSSVRPQSKRPRKDPPSAVG-SGNAGGSG 111
PQ P P G P + H R Q K P VG G G +G
Sbjct: 920 PQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETG 979
Query: 112 PRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEG 156
P G+ G G+ AA G++ G SG + G
Sbjct: 980 PIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAG 1024
Score = 45.4 bits (106), Expect = 3e-04
Identities = 56/164 (34%), Positives = 61/164 (37%), Gaps = 26/164 (15%)
Query: 7 DGGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTP-RAGADGPPAPPG- 64
DG GEDG ++G R G G GT P AG DGPP P G
Sbjct: 630 DGMRGEDG--EIGPRGLP-------GEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGN 680
Query: 65 -APQA-PSPP--QGSPQDQHHFLRSSVRPQSKRPRKDPPSAVG-SGNAGGSGPRG-KGAE 118
PQ P PP QG+P Q L P K P G +G G GP G G E
Sbjct: 681 MGPQGEPGPPGQQGNPGPQG--LPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKE 738
Query: 119 GGGSSSGNVSGVAPAAPAG--GSR-----SSSRNLGSSGGEKEE 155
G G + P P G G R R L S GEK E
Sbjct: 739 GQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGE 782
Score = 43.9 bits (102), Expect = 0.001
Identities = 39/152 (25%), Positives = 58/152 (38%), Gaps = 21/152 (13%)
Query: 6 GDGGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDE-KTPRAGADGPPAPPG 64
GDG G G + + + DE + G G + G ++ + G GPP PPG
Sbjct: 1166 GDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPG 1225
Query: 65 APQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGKGAEGGGSSS 124
P+ P P G+ Q PP +VGS GG G +G+ E G
Sbjct: 1226 -PRGPQGPNGADGPQ-----------------GPPGSVGS--VGGVGEKGEPGEAGNPGP 1265
Query: 125 GNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEG 156
+GV G + + G++G +G
Sbjct: 1266 PGEAGVGGPKGERGEKGEAGPPGAAGPPGAKG 1297
Score = 43.9 bits (102), Expect = 0.001
Identities = 41/156 (26%), Positives = 58/156 (37%), Gaps = 15/156 (9%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTP-RAGADGPP---APP 63
G GE G + + G G + G ++ P AG DGPP PP
Sbjct: 1378 GAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPP 1437
Query: 64 GAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGK-GAEGGGS 122
G P P + H L + P ++ K G+ G G +G GA+G G
Sbjct: 1438 GLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEK--------GDRGLPGTQGSPGAKGDGG 1489
Query: 123 SSGNVSGVAPAAPAG--GSRSSSRNLGSSGGEKEEG 156
G + P P G G + N GS+G ++G
Sbjct: 1490 IPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKG 1525
Score = 41.2 bits (95), Expect = 0.006
Identities = 40/134 (29%), Positives = 52/134 (38%), Gaps = 19/134 (14%)
Query: 32 GAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQS 91
GA GA+ + G K + AGA+GPP G P P P G P + LR P
Sbjct: 1366 GAAGAEGRQGEKGAKGE-----AGAEGPPGKTG-PVGPQGPAGKPGPEG--LRGIPGPVG 1417
Query: 92 KRPRKDPPSAVGSGNAGGSGPRG----KGAEGGGSSSGNVSGVAPAAPAG-----GSRSS 142
++ P +A G G GP G KG G G+ + P G G R
Sbjct: 1418 EQGL--PGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGL 1475
Query: 143 SRNLGSSGGEKEEG 156
GS G + + G
Sbjct: 1476 PGTQGSPGAKGDGG 1489
Score = 40.4 bits (93), Expect = 0.011
Identities = 31/133 (23%), Positives = 43/133 (32%), Gaps = 4/133 (3%)
Query: 30 GEGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRP 89
G+G+ G + + + + + R GPP P G P P G P
Sbjct: 501 GDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGP 560
Query: 90 QSKRPRKDPPSAVGS----GNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRN 145
Q R + PP G G G G RG E G G+ G R
Sbjct: 561 QGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGP 620
Query: 146 LGSSGGEKEEGKK 158
G G ++G +
Sbjct: 621 QGPPGPPGDDGMR 633
Score = 38.1 bits (87), Expect = 0.054
Identities = 32/108 (29%), Positives = 40/108 (37%), Gaps = 28/108 (25%)
Query: 32 GAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQS 91
G G + G K ++ P G GPP P G P PP
Sbjct: 1321 GEPGPAGQDGVGGDKGEDGDP--GQPGPPGPSGEAGPPGPPG------------------ 1360
Query: 92 KRPRKDPPSAVGS-GNAGGSGPRGK-GAEGGGSSSGNVSGVAPAAPAG 137
++ PP A G+ G G G +G+ GAEG G V P PAG
Sbjct: 1361 ---KRGPPGAAGAEGRQGEKGAKGEAGAEG---PPGKTGPVGPQGPAG 1402
Score = 37.4 bits (85), Expect = 0.092
Identities = 40/147 (27%), Positives = 50/147 (34%), Gaps = 22/147 (14%)
Query: 25 EESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPP-----QGSPQDQ 79
E+ GE E G + E+ + G GPP G P A PP +G+P
Sbjct: 1253 EKGEPGEAGNPGPPGEAGVGGPKGERGEK-GEAGPPGAAGPPGAKGPPGDDGPKGNPGPV 1311
Query: 80 HHFLRSSVRPQSKRPRKDPPSA----VGS-----GNAGGSGPRGKGAEGGGSSSGNVSGV 130
P P +P A VG G+ G GP G E G G
Sbjct: 1312 GF-------PGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGP 1364
Query: 131 APAAPAGGSRSSSRNLGSSGGEKEEGK 157
AA A G + G +G E GK
Sbjct: 1365 PGAAGAEGRQGEKGAKGEAGAEGPPGK 1391
Score = 36.2 bits (82), Expect = 0.20
Identities = 44/155 (28%), Positives = 57/155 (36%), Gaps = 21/155 (13%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTP-RAGADGPPAPPGAP 66
G G GLK E G G+ S+GT P R G GPP P G
Sbjct: 1036 GAQGAPGLK------GGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEK 1089
Query: 67 QAPSP--PQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGK-GAEGGGSS 123
AP PQG + R + P P A +G+ G G +G+ G G S
Sbjct: 1090 GAPGEKGPQG----------PAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGS 1139
Query: 124 SGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGKK 158
G+ P P G + G +GG+ E G +
Sbjct: 1140 KGDKGENGPPGPP-GLQGPVGAPGIAGGDGEPGPR 1173
Score = 34.7 bits (78), Expect = 0.60
Identities = 48/188 (25%), Positives = 59/188 (31%), Gaps = 31/188 (16%)
Query: 6 GDGGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSG-------TKRDEKTPRAGADG 58
G G GE G K G+ A E + EG G G T G G
Sbjct: 418 GHGAYGEKGQK--GEPAVVEPGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPG 475
Query: 59 PPAPPGAPQAPSPP---------------QGSPQDQHHFLRSSVRPQSKRPRKDPPSAVG 103
P PGA P PP +G ++ Q++ + PP +G
Sbjct: 476 RPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMG 535
Query: 104 ----SGNAGGSGPRGKGAEGGGSSSGNVSGV-APAAPAG--GSRSSSRNLGSSGGEKEEG 156
G GG G G E G GV P P G G R G G E G
Sbjct: 536 LTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPG 595
Query: 157 KKVRRQWE 164
K R ++
Sbjct: 596 AKGDRGFD 603
Score = 32.3 bits (72), Expect = 3.0
Identities = 44/170 (25%), Positives = 61/170 (35%), Gaps = 31/170 (18%)
Query: 8 GGSGEDGLK-KLGKRAADEESLEGE----GAGGADAAEESSGTKRDEKTPRAGADGPPAP 62
G G+DGL G+R E +G+ G GG + +G +T G G P P
Sbjct: 937 GPPGKDGLPGHPGQRG--ETGFQGKTGPPGPGGVVGPQGPTG-----ETGPIGERGHPGP 989
Query: 63 PGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDP------------PSAVGS-GNAGG 109
PG P P + ++ + PQ + P P A G+ G GG
Sbjct: 990 PGPPGEQGLPGAAGKEG---AKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGG 1046
Query: 110 SGPRG-KGAEGGGSSSGNVSGVAPAAPAG--GSRSSSRNLGSSGGEKEEG 156
GP+G G G G+ P G G + G G E+G
Sbjct: 1047 EGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKG 1096
Score = 30.8 bits (68), Expect = 8.6
Identities = 25/78 (32%), Positives = 27/78 (34%), Gaps = 7/78 (8%)
Query: 467 GAEGK----GVGRPPPAADALQSSGESSPESAPGEGAALSLSSPDAPDRPPPRHQDTG-P 521
GA G+ GV PP + GE P G L P P PP G P
Sbjct: 661 GAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKP 720
Query: 522 CLEKTPAEGRDSPTREPG 539
L P G D P PG
Sbjct: 721 GLAGLP--GADGPPGHPG 736
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 47.8 bits (112), Expect = 7e-05
Identities = 50/155 (32%), Positives = 58/155 (37%), Gaps = 30/155 (19%)
Query: 6 GDGGSGEDGLK-KLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPPAPPG 64
G G GE GL+ ++G D GA GA A +G D AGA GP P G
Sbjct: 653 GKGEKGEPGLRGEIGNPGRDG----ARGAPGAVGAPGPAGATGDRG--EAGAAGPAGPAG 706
Query: 65 APQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVG----SGNAGGSGPRGKGAEGG 120
P+GSP + R V P P A G G G GP KG G
Sbjct: 707 -------PRGSPGE-----RGEVGPAGPNGFAGPAGAAGQPGAKGERGAKGP--KGENGV 752
Query: 121 GSSSGNVSGVAPAAPAG-----GSRSSSRNLGSSG 150
+G V PA P G GSR G +G
Sbjct: 753 VGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPGMTG 787
Score = 46.6 bits (109), Expect = 2e-04
Identities = 45/163 (27%), Positives = 61/163 (37%), Gaps = 18/163 (11%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPPAPPG--- 64
G G++G K A + +G GA G + + G GPP PPG
Sbjct: 502 GDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGK-----GEQGPPGPPGFQG 556
Query: 65 --APQAPSPPQGSPQDQH-HFLRSSVRPQSKRPRKDPPSAVG----SGNAGGSGPRG-KG 116
P P+ G P ++ H P R + PP G +G G GP G G
Sbjct: 557 LPGPSGPAGEVGKPGERGLHGEFGLPGPAGPRGERGPPGESGAAGPTGPIGSRGPSGPPG 616
Query: 117 AEGGGSSSGNVSGVAPAAPAG--GSRSSSRNLGSSGGEKEEGK 157
+G G V V A P+G G G GG+ E+G+
Sbjct: 617 PDGNKGEPGVVGAVGTAGPSGPSGLPGERGAAGIPGGKGEKGE 659
Score = 44.7 bits (104), Expect = 6e-04
Identities = 36/119 (30%), Positives = 46/119 (38%), Gaps = 9/119 (7%)
Query: 26 ESLEGEGAGGADAAEESSGTKRDEKTP--RAGADGPPAPPGAPQAPSPP----QGSPQDQ 79
+SL+ E A + +R P R G DGP PPG P P PP + Q
Sbjct: 23 QSLQEETVRKGPAGDRGPRGERGPPGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYD 82
Query: 80 HHFLRSSVRPQSKRPRKDPPSAVGS-GNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAG 137
+ P + PP A G+ G G GP G+ E G + G PA P G
Sbjct: 83 GKGVGLGPGPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARG--PAGPPG 139
Score = 43.1 bits (100), Expect = 0.002
Identities = 33/119 (27%), Positives = 43/119 (36%), Gaps = 16/119 (13%)
Query: 54 AGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGS--------- 104
AG GP PG A P G + LR + + + P AVG+
Sbjct: 633 AGPSGPSGLPGERGAAGIPGGKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPGPAGATGD 692
Query: 105 -------GNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEG 156
G AG +GPRG E G +G A A A G + G+ G + E G
Sbjct: 693 RGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGAKGPKGENG 751
Score = 39.7 bits (91), Expect = 0.019
Identities = 42/167 (25%), Positives = 57/167 (34%), Gaps = 31/167 (18%)
Query: 8 GGSGEDGLKKLGKRAAD----EESLEGE-------GAGGADAAEESSGTKRDEKTP---- 52
G +G+ G K G+R A E + G G G + +G++ D P
Sbjct: 730 GAAGQPGAK--GERGAKGPKGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPGMTG 787
Query: 53 ---RAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGG 109
AG GPP P G P PP + ++ + PR D +G G
Sbjct: 788 FPGAAGRTGPPGPSGISGPPGPPGPAGKE-----------GLRGPRGDQGPVGRTGEVGA 836
Query: 110 SGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEG 156
GP G E G S +G G + LG G E G
Sbjct: 837 VGPPGFAGEKGPSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERG 883
Score = 38.9 bits (89), Expect = 0.032
Identities = 40/142 (28%), Positives = 52/142 (36%), Gaps = 12/142 (8%)
Query: 7 DGGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTK-RDEKTPRAGADGPPAPPGA 65
DG G DG ++ GA GA G + G GP P GA
Sbjct: 933 DGPPGRDGQPGHKGERGYPGNIGPVGAAGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGA 992
Query: 66 --PQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGKGAEGGGSS 123
P+ PS PQG D+ P K PR P +G G G G + G +
Sbjct: 993 VGPRGPSGPQGIRGDKGE-------PGEKGPRGLPGLKGHNGLQGLPGIAGHHGDQG--A 1043
Query: 124 SGNVSGVAPAAPAGGSRSSSRN 145
G+V P PAG S + ++
Sbjct: 1044 PGSVGPAGPRGPAGPSGPAGKD 1065
Score = 33.9 bits (76), Expect = 1.0
Identities = 56/191 (29%), Positives = 64/191 (33%), Gaps = 41/191 (21%)
Query: 3 VKLGDGGSGEDGLKKLGKRAADEESLEGE----GAGGADAAEESSGTKRDEKTPRAGADG 58
VK G GE+G G+ A L GE GA G A S G+ AG G
Sbjct: 197 VKGEPGAPGENGTP--GQTGA--RGLPGERGRVGAPGPAGARGSDGSVGP--VGPAGPIG 250
Query: 59 PPAPPGAPQAPSP-----------PQGSPQDQHHF----LRSSVRPQSKRPRKDPPSAVG 103
PPG P AP P P G + L V P A G
Sbjct: 251 SAGPPGFPGAPGPKGEIGAVGNAGPAGPAGPRGEVGLPGLSGPVGPPGNPGANGLTGAKG 310
Query: 104 S-------GNAGGSGPRG----KGAEGGGSSSGNVSGVAPAAPAG-----GSRSSSRNLG 147
+ G G GPRG GA G + G V PA G G S+ G
Sbjct: 311 AAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGSAGPQG 370
Query: 148 SSGGEKEEGKK 158
G EEGK+
Sbjct: 371 PPGPSGEEGKR 381
Score = 33.5 bits (75), Expect = 1.3
Identities = 38/129 (29%), Positives = 49/129 (37%), Gaps = 25/129 (19%)
Query: 53 RAGADGPPAPPGAP-----QAPSPPQGSPQD---------QHHFLRSSVRPQSKRPR-KD 97
+AG DG P PG P P +G P + H ++ Q P K
Sbjct: 140 KAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKG 199
Query: 98 PPSAVG-SGNAGGSGPRG-------KGAEGGGSSSGNVSGVAPAAPAG--GSRSSSRNLG 147
P A G +G G +G RG GA G + G+ V P PAG GS G
Sbjct: 200 EPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPG 259
Query: 148 SSGGEKEEG 156
+ G + E G
Sbjct: 260 APGPKGEIG 268
Score = 33.1 bits (74), Expect = 1.7
Identities = 43/151 (28%), Positives = 49/151 (32%), Gaps = 17/151 (11%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQ 67
G GE GL L + G GA A G AGA G P P G P
Sbjct: 280 GPRGEVGLPGLSGPVGPPGNPGANGLTGAKGAAGLPGV--------AGAPGLPGPRGIP- 330
Query: 68 APSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGS-GNAGGSGPRG-KGAEGGGSSSG 125
P G+ R V K G G+AG GP G G EG +G
Sbjct: 331 GPVGAAGATG-----ARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNG 385
Query: 126 NVSGVAPAAPAGGSRSSSRNLGSSGGEKEEG 156
P P G R S + G G + G
Sbjct: 386 EAGSAGPPGPP-GLRGSPGSRGLPGADGRAG 415
Score = 33.1 bits (74), Expect = 1.7
Identities = 49/178 (27%), Positives = 62/178 (34%), Gaps = 35/178 (19%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQ 67
G +G++GL+ G R D+ + G GA +G K + AG GPP PG
Sbjct: 811 GPAGKEGLR--GPRG-DQGPVGRTGEVGAVGPPGFAGEKGP--SGEAGTAGPPGTPGPQG 865
Query: 68 APSPPQ--GSPQDQHHFLRSSVRPQSKRP----------RKDPPSAVGS----------- 104
P G P + V P + PP AVGS
Sbjct: 866 LLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAG 925
Query: 105 --GNAGGSGPRGK----GAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEG 156
GN G GP G+ G +G GN+ G AA A G G G E G
Sbjct: 926 RDGNPGNDGPPGRDGQPGHKGERGYPGNI-GPVGAAGAPGPHGPVGPAGKHGNRGETG 982
Score = 32.0 bits (71), Expect = 3.9
Identities = 45/172 (26%), Positives = 62/172 (36%), Gaps = 22/172 (12%)
Query: 8 GGSGEDGLKKLGKRAADE-----ESLEGE-GAGGADAAEESSGT-----KRDEKTPRAGA 56
G SGE+G + A L G G+ G A+ +G R P AG
Sbjct: 373 GPSGEEGKRGPNGEAGSAGPPGPPGLRGSPGSRGLPGADGRAGVMGPPGSRGASGP-AGV 431
Query: 57 DGPPAPPGAPQAPS--PPQGSPQDQHHFLRSSVRPQSKRPRKD-------PPSAVGS-GN 106
GP G P P P+G P + + P D P A G GN
Sbjct: 432 RGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGARGEPGN 491
Query: 107 AGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGKK 158
G GP+G + G + +G+A A A G ++ G G + +G K
Sbjct: 492 IGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGK 543
Score = 32.0 bits (71), Expect = 3.9
Identities = 31/106 (29%), Positives = 41/106 (38%), Gaps = 23/106 (21%)
Query: 54 AGADGPPAPPGAPQAPSP--PQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSG 111
AG +GP PG P P P G+ + + P K P DP G+AG +G
Sbjct: 462 AGKEGPVGLPGIDGRPGPIGPAGARGEPGNI----GFPGPKGPTGDPGKNGDKGHAGLAG 517
Query: 112 PRGK-GAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEG 156
RG G +G + G P P G GG+ E+G
Sbjct: 518 ARGAPGPDGNNGAQG------PPGPQG----------VQGGKGEQG 547
>gi|19920317 cytoskeleton-associated protein 4 [Homo sapiens]
Length = 602
Score = 47.4 bits (111), Expect = 9e-05
Identities = 41/118 (34%), Positives = 48/118 (40%), Gaps = 26/118 (22%)
Query: 32 GAGGADAAEESSGTKRDEKTPRAGADG-PPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQ 90
G G A +E+ + P GAD PP APQ P PP QH
Sbjct: 12 GHGAASPSEKGAH-------PSGGADDVAKKPPPAPQQPPPPPAPHPQQH---------- 54
Query: 91 SKRPRKDPPS-AVGSGNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLG 147
P++ P + A G G G G G G SSS + S A AA A S S SR LG
Sbjct: 55 ---PQQHPQNQAHGKGGHRGGG----GGGGKSSSSSSASAAAAAAAASSSASCSRRLG 105
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 47.4 bits (111), Expect = 9e-05
Identities = 43/150 (28%), Positives = 55/150 (36%), Gaps = 9/150 (6%)
Query: 8 GGSGEDGLK-KLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAP 66
G GE+G ++G R E G GA + G D T AG GP P G P
Sbjct: 290 GSPGENGAPGQMGPRGLPGE----RGRPGAPGPAGARGN--DGATGAAGPPGPTGPAGPP 343
Query: 67 QAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGKGAEGGGSSSGN 126
P + R S PQ R PP G+ AG +G G + G +
Sbjct: 344 GFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGA--AGPAGNPGADGQPGAKGANG 401
Query: 127 VSGVAPAAPAGGSRSSSRNLGSSGGEKEEG 156
G+A A G+R S G G +G
Sbjct: 402 APGIAGAPGFPGARGPSGPQGPGGPPGPKG 431
Score = 45.1 bits (105), Expect = 4e-04
Identities = 43/157 (27%), Positives = 54/157 (34%), Gaps = 6/157 (3%)
Query: 6 GDGGS-GEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTP-RAGADGPPAPP 63
GD G+ G+ G A + GA GA A S+G P AG GPP P
Sbjct: 830 GDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPS 889
Query: 64 GAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVG----SGNAGGSGPRGKGAEG 119
G P PP + ++ R P + PP G G+ G GP G
Sbjct: 890 GNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTP 949
Query: 120 GGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEG 156
G GV G R G SG ++G
Sbjct: 950 GPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQG 986
Score = 43.5 bits (101), Expect = 0.001
Identities = 48/159 (30%), Positives = 62/159 (38%), Gaps = 21/159 (13%)
Query: 8 GGSGEDGLKKL-GKR-AADEESLEGE-GAGGADAAEESSGTKRDEKTPRAGADGPPAPPG 64
G G GL+ + G+R AA +G+ G G A+ S G +D G GPP P G
Sbjct: 719 GSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPG--KDGVRGLTGPIGPPGPAG 776
Query: 65 AP-----QAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVG-SGNAGGSG-PRGKGA 117
AP PS P G + R PP G +G G G P KG
Sbjct: 777 APGDKGESGPSGPAGPT--------GARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGE 828
Query: 118 EGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEG 156
G + G+ PA PA G N+G+ G + G
Sbjct: 829 PGDAGAKGDAGPPGPAGPA-GPPGPIGNVGAPGAKGARG 866
Score = 42.7 bits (99), Expect = 0.002
Identities = 42/136 (30%), Positives = 47/136 (34%), Gaps = 17/136 (12%)
Query: 25 EESLEGE-GAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFL 83
E EG GA G+ + S G K D G GP PPGAP AP P
Sbjct: 1011 ESGREGAPGAEGSPGRDGSPGAKGDR-----GETGPAGPPGAPGAPGAPGPVGPAGKSGD 1065
Query: 84 RSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGKGAEGGGSSSGNVSG-------VAPAAPA 136
R P P A G AG GPRG E G + G P P
Sbjct: 1066 RGETGPAGPAGPVGPVGA--RGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPP 1123
Query: 137 G--GSRSSSRNLGSSG 150
G G + S G +G
Sbjct: 1124 GSPGEQGPSGASGPAG 1139
Score = 40.8 bits (94), Expect = 0.008
Identities = 43/146 (29%), Positives = 54/146 (36%), Gaps = 21/146 (14%)
Query: 32 GAGGADAAEESSGTKRDEKTPR-AGADGPPAPPGAPQA--PSPPQGSPQDQHHFLRSSVR 88
GA G + S G P AG DG P PPG P A + G P +
Sbjct: 536 GAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKG--AAGEPG 593
Query: 89 PQSKRPRKDPPSAVG----SGNAGGSGPRG-------KGAEGGGSSSGNVSGVAPAAPAG 137
+R PP AVG G AG GP G +G +G S G PA P G
Sbjct: 594 KAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPG 653
Query: 138 -----GSRSSSRNLGSSGGEKEEGKK 158
G + +LG+ G G++
Sbjct: 654 EAGKPGEQGVPGDLGAPGPSGARGER 679
Score = 40.0 bits (92), Expect = 0.014
Identities = 36/118 (30%), Positives = 49/118 (41%), Gaps = 19/118 (16%)
Query: 54 AGADGPPAPPGAPQAPSPP-----QGSPQDQHHFLRSSVRPQSKRPRKD-----PPSAVG 103
+G GPP P G P PP +G+P + R P +K R + PP A G
Sbjct: 991 SGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDG-SPGAKGDRGETGPAGPPGAPG 1049
Query: 104 SGNAGGS-GPRGKGAEGGGSSSGNVSGVAPAAPAG--GSRSSSRNLGSSGGEKEEGKK 158
+ A G GP GK + G PA P G G+R + G G + E G++
Sbjct: 1050 APGAPGPVGPAGKSGD-----RGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQ 1102
Score = 38.9 bits (89), Expect = 0.032
Identities = 42/152 (27%), Positives = 54/152 (35%), Gaps = 7/152 (4%)
Query: 8 GGSGEDGLKKLGKRAADEESLEG-EGAGGADAAEESSGTKRDEKTP-RAGADGPPAPPGA 65
G +G G+K G R L+G +G G + G+ + P + G G P G
Sbjct: 257 GTAGLPGMK--GHRGFS--GLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGR 312
Query: 66 PQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGS-GNAGGSGPRGKGAEGGGSSS 124
P AP P D P P AVG+ G AG GPRG G
Sbjct: 313 PGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGE 372
Query: 125 GNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEG 156
G A AA G+ + G+ G G
Sbjct: 373 PGPPGPAGAAGPAGNPGADGQPGAKGANGAPG 404
Score = 37.4 bits (85), Expect = 0.092
Identities = 41/149 (27%), Positives = 50/149 (33%), Gaps = 23/149 (15%)
Query: 24 DEESLEGEGAGGADAAEESSGTK----RDEKTPRAGADGPPAPPGAPQAPS-PPQGSPQD 78
D+E+ EG G G RD + G GPP PPG P P +PQ
Sbjct: 104 DQETTGVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQL 163
Query: 79 QHHFLRSS---------VRPQSKRPRKDPPSAVGSGNAGGSGPRGKGAEGGGSSSGNVSG 129
+ + S + P R PP A G G GP G+ E G S
Sbjct: 164 SYGYDEKSTGGISVPGPMGPSGPRGLPGPPGA--PGPQGFQGPPGEPGEPGASGP----- 216
Query: 130 VAPAAPAG--GSRSSSRNLGSSGGEKEEG 156
+ P P G G G G E G
Sbjct: 217 MGPRGPPGPPGKNGDDGEAGKPGRPGERG 245
Score = 37.4 bits (85), Expect = 0.092
Identities = 43/159 (27%), Positives = 59/159 (37%), Gaps = 11/159 (6%)
Query: 8 GGSGEDGLKKLGKRAAD-EESLEGEGA--GGADAAEESSGTKRDEKTPRAGADGPPAPPG 64
G GE G + G R ++ + + GE G A AA + D + GA+G P G
Sbjct: 350 GAKGEAGPQ--GPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAG 407
Query: 65 AP-----QAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGKGAEG 119
AP + PS PQG P +S P + + D + G G GP G E
Sbjct: 408 APGFPGARGPSGPQG-PGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEE 466
Query: 120 GGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGKK 158
G + G G R + G G + G K
Sbjct: 467 GKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPK 505
Score = 36.6 bits (83), Expect = 0.16
Identities = 37/133 (27%), Positives = 45/133 (33%), Gaps = 12/133 (9%)
Query: 38 AAEESSGTKRDEKTP--RAGADGPPAPPG--------APQAPSPPQGSPQDQHHFLRSSV 87
A +E R E P R G GPP PPG P+ G+P Q + V
Sbjct: 901 AGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGV 960
Query: 88 --RPQSKRPRKDPPSAVGSGNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRN 145
P + R P SG G GP G E G G+A G +
Sbjct: 961 VGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGA 1020
Query: 146 LGSSGGEKEEGKK 158
GS G + G K
Sbjct: 1021 EGSPGRDGSPGAK 1033
Score = 36.2 bits (82), Expect = 0.20
Identities = 42/148 (28%), Positives = 48/148 (32%), Gaps = 30/148 (20%)
Query: 32 GAGGADAAEESSGTKRDEKTPR-AGADGPPAP--PGAPQAPSPPQGSPQDQHHFLRSSVR 88
GA G A+ ++G P GA GP P PG P P G P +
Sbjct: 389 GADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEP--------GAPG 440
Query: 89 PQSKRPRKDPPSAVG----SGNAGGSGPRG-------------KGAEGGGSSSG--NVSG 129
+ K P VG G AG G RG G GG S G G
Sbjct: 441 SKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADG 500
Query: 130 VAPAAPAGGSRSSSRNLGSSGGEKEEGK 157
VA G R S G G E G+
Sbjct: 501 VAGPKGPAGERGSPGPAGPKGSPGEAGR 528
Score = 35.8 bits (81), Expect = 0.27
Identities = 36/133 (27%), Positives = 47/133 (35%), Gaps = 27/133 (20%)
Query: 50 KTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQS-----KRPRKDPPSAVGS 104
K R G GPP P GA P G P + H S + P+ +P S +
Sbjct: 237 KPGRPGERGPPGPQGARGLPG-TAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGEN 295
Query: 105 GNAGGSGPRG-------------KGAEGGGSSSGNVSGVAPAAPAG--------GSRSSS 143
G G GPRG GA G ++G P PAG G++ +
Sbjct: 296 GAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEA 355
Query: 144 RNLGSSGGEKEEG 156
G G E +G
Sbjct: 356 GPQGPRGSEGPQG 368
Score = 35.8 bits (81), Expect = 0.27
Identities = 59/227 (25%), Positives = 79/227 (34%), Gaps = 27/227 (11%)
Query: 443 PPAQILGIQS-GQGTARGQVKCPRS----GAEGKGVGRPPPAADALQSSGESSPESAPGE 497
PP I + + G ARG P + GA G+ VG P P SG + P PG
Sbjct: 849 PPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGR-VGPPGP-------SGNAGPPGPPGP 900
Query: 498 GAALSLSSPDAPDRPPPRHQDTGPCLEKTPAEGRDSPTRE-PGALPCACGQLPDLEDELS 556
P P R + GP PA + SP + P P G
Sbjct: 901 AGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGV 960
Query: 557 LLDPLPRYLKSCQDLIVP--EQCRCADTRPGSEQPPLGGAASPEVLAPVSKEAADLAPTG 614
+ P R + L P E + + E+ P G P + P + + AP G
Sbjct: 961 VGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAP-G 1019
Query: 615 PSPRPGPGLLLDVCTKDLADAPAEELQEKGSPAGPPPSQGQPAARPP 661
PG +D + + E G PAGPP + G P A P
Sbjct: 1020 AEGSPG---------RDGSPGAKGDRGETG-PAGPPGAPGAPGAPGP 1056
Score = 34.7 bits (78), Expect = 0.60
Identities = 41/155 (26%), Positives = 51/155 (32%), Gaps = 22/155 (14%)
Query: 8 GGSGEDGLKKLGKR-------AADEESLEGEGAGGADAAEESSGTKRDEKTPRA-----G 55
G +GE G K G+R A +GE +R E+ P G
Sbjct: 587 GAAGEPG--KAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQG 644
Query: 56 ADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGK 115
GP PPG P QG P D + P R + P G G GP G
Sbjct: 645 LPGPAGPPGEAGKPGE-QGVPGDL-----GAPGPSGARGERGFPGE--RGVQGPPGPAGP 696
Query: 116 GAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSG 150
G + G A A A GS+ + G G
Sbjct: 697 RGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPG 731
Score = 33.9 bits (76), Expect = 1.0
Identities = 26/87 (29%), Positives = 29/87 (33%), Gaps = 13/87 (14%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDE----KTPRAGADGPPAPP 63
G GE G A GA G D G +T AG GPP PP
Sbjct: 1124 GSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPP 1183
Query: 64 GAPQAPSPPQGS---------PQDQHH 81
G P P PP PQ++ H
Sbjct: 1184 GPPGPPGPPSAGFDFSFLPQPPQEKAH 1210
Score = 33.5 bits (75), Expect = 1.3
Identities = 35/141 (24%), Positives = 48/141 (34%), Gaps = 25/141 (17%)
Query: 32 GAGGADAAEESSGTKRDEKTPRAGADGPPAP------------PGAPQAPSPP--QGSPQ 77
G GA ++ +G K E P G GPP P PG P PP +G P
Sbjct: 434 GEPGAPGSKGDTGAK-GEPGP-VGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPG 491
Query: 78 DQHHFLRSSVRPQSKRPRKDPPSAVGS-GNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPA 136
+ V P G G+ G +GP+G E G + G +
Sbjct: 492 SRGFPGADGVA--------GPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGS 543
Query: 137 GGSRSSSRNLGSSGGEKEEGK 157
GS G G ++G+
Sbjct: 544 PGSPGPDGKTGPPGPAGQDGR 564
Score = 32.0 bits (71), Expect = 3.9
Identities = 36/109 (33%), Positives = 39/109 (35%), Gaps = 14/109 (12%)
Query: 32 GAGGADAAEESSGTKRDEK-TPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQ 90
G GG A + S G DEK T GP P G P PP G+P Q Q
Sbjct: 154 GLGGNFAPQLSYGY--DEKSTGGISVPGPMGPSGPRGLPGPP-GAPGPQGF--------Q 202
Query: 91 SKRPRKDPPSAVGS-GNAGGSGPRGK-GAEGGGSSSGNVSGVAPAAPAG 137
P A G G G GP GK G +G G P P G
Sbjct: 203 GPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQG 251
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 47.4 bits (111), Expect = 9e-05
Identities = 35/102 (34%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 51 TPRAG--ADGPPAPPGAPQAPSP-----PQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVG 103
+P+ G GPP PPG PQ P P PQG P +S+ PR P G
Sbjct: 40 SPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQG 99
Query: 104 SGNAGGSGPRGKGAEGGGSSSGNVSGVAPAAP--AGGSRSSS 143
GG P+G +GG G P P GGS+S S
Sbjct: 100 PPPQGGK-PQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQS 140
Score = 40.8 bits (94), Expect = 0.008
Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 11/93 (11%)
Query: 47 RDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGN 106
R ++P GPP G PQ P PPQG + Q P + PP+ GS +
Sbjct: 88 RSPRSPPGKPQGPPPQGGKPQGP-PPQGGNKPQ--------GPPPPGKPQGPPAQGGSKS 138
Query: 107 AGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGS 139
P GK +G GN + P PAGG+
Sbjct: 139 QSARSPPGK-PQGPPQQEGN-NPQGPPPPAGGN 169
Score = 38.5 bits (88), Expect = 0.041
Identities = 32/108 (29%), Positives = 37/108 (34%), Gaps = 24/108 (22%)
Query: 52 PRAGADGP--PAPPGAPQAPSP----------PQGSPQDQHHFLRSSVRPQSKRPRKDPP 99
P G + P P PPG PQ P P P G PQ PQ +P+ PP
Sbjct: 61 PPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQ--------GPPPQGGKPQGPPP 112
Query: 100 SAVGSGNAGGSGPRGK--GAEGGGSSSGNVSGVAPAAPAGGSRSSSRN 145
G G P GK G G S + P P G + N
Sbjct: 113 Q--GGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNN 158
Score = 33.5 bits (75), Expect = 1.3
Identities = 24/80 (30%), Positives = 28/80 (35%), Gaps = 21/80 (26%)
Query: 584 PGSEQ-PPLGGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEELQE 642
PG Q PP G P+ P K P GP P+ D
Sbjct: 54 PGKPQGPPPQGGNKPQGPPPPGK------PQGPPPQ--------------GDKSRSPRSP 93
Query: 643 KGSPAGPPPSQGQPAARPPK 662
G P GPPP G+P PP+
Sbjct: 94 PGKPQGPPPQGGKPQGPPPQ 113
Score = 30.8 bits (68), Expect = 8.6
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
Query: 34 GGADAAEESSGTKRDEKTPRAGADGPPAPP----GAPQAP-SPPQGSPQDQHHFLRSSVR 88
GG+ + S + + P+ + P PP G PQ P +PP G PQ
Sbjct: 134 GGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPR------P 187
Query: 89 PQSKRPRKDP 98
PQ RP + P
Sbjct: 188 PQGGRPSRPP 197
>gi|236459851 ubinuclein 2 [Homo sapiens]
Length = 1347
Score = 47.0 bits (110), Expect = 1e-04
Identities = 92/437 (21%), Positives = 163/437 (37%), Gaps = 33/437 (7%)
Query: 769 PGKVVTVSSRSPRCPRNQASLRSSKTFPPSSAPCSSGLRNPPRPLLVPGPSSTGSNDSDG 828
P K + + P+ +FP CS LV S ++ S
Sbjct: 675 PAKKKVIPAPKPKVKEVMVKTLPLHSFPTMLKECSPKKDQKTPTSLVASVSGPPTSSSTA 734
Query: 829 GLFAVPTTLPPNSRHGKLFSPSKEAELTFRQHLNSISMQSDFFLPKPRKLRNRHLRKPL- 887
+ A ++ P ++ S + +L+F H S+ + S+ + N + P+
Sbjct: 735 AIAAASSSSAP-AQETICLDDSLDEDLSF--HSPSLDLVSEALAV----INNGNKGPPVG 787
Query: 888 --VVQRTLLPRPSENQSHNVCSFSILSNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPP 945
+ T PRP + S L ++ S + SS A + P+ K P
Sbjct: 788 SRISMPTTKPRPGLREEKLASIMSKLPLATPKKLDSTQTTHSSSLIAGHTGPVPKK---P 844
Query: 946 QATSHLASAIDLAATSA---GILSGNPLPA-LDTEGLSGISPL-----SSDEVTGAISGQ 996
Q +H + L A S+ +S PLPA L +GL S + S V+ + Q
Sbjct: 845 QDLAHTGISSGLIAGSSIQNPKVSLEPLPARLLQQGLQRSSQIHTSSSSQTHVSSSSQAQ 904
Query: 997 DSTGTHQDGDTLPTVGGSDPFVSIPSRPEQEPVADSFQGSSVLSLSELPKAPLQNGLSIP 1056
+ +H G + S + + V ++ ++S+ P+ + P
Sbjct: 905 IAASSHALGTSEAQDASS--LTQVTKVHQHSAVQQNYVSPLQATISKSQTNPVVKLSNNP 962
Query: 1057 LSSSESSSTRLSPPDVSALLDISLPGPPEDA------LSQGEPATHISDSIIEIAISSGQ 1110
S SS + S + L +S P P + +S+ P+T S + + A+ S
Sbjct: 963 QLSCSSSLIKTSDKPLMYRLPLSTPSPGNGSQGSHPLVSRTVPSTTTSSNYLAKAMVSQI 1022
Query: 1111 YGEGVPLSPAKLNGSDSSKSLPSPSSSPQPHWIASPTHDPQWYPSDSTDSSLSSLFASFI 1170
+G SP + S + P P++SP+P P+ P+ PS S S+S+ S
Sbjct: 1023 STQGFK-SPFSMAASPKLAASPKPATSPKPLPSPKPSASPK--PSLSAKPSVSTKLISKS 1079
Query: 1171 SPEKSRKMLPTPIGTNS 1187
+P + P+ N+
Sbjct: 1080 NPTPKPTVSPSSSSPNA 1096
>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
Length = 1142
Score = 47.0 bits (110), Expect = 1e-04
Identities = 180/785 (22%), Positives = 273/785 (34%), Gaps = 160/785 (20%)
Query: 483 LQSSGESSPESAP-GEGAALSL----SSPDAPDRPPPRH--------QDTGPCLEKTPAE 529
LQSS ES P+S P GE + L SSP++ D P +D+ L++ P E
Sbjct: 15 LQSSSES-PQSCPEGEDSQSPLQIPQSSPESDDTLYPLQSPQSRSEGEDSSDPLQRPP-E 72
Query: 530 GRDSPTREPGALPCACGQLPDLEDELSLLDPLPRYLKSCQDLIVPEQCRCADTRPGSEQP 589
G+DS + P +P + + D + L P +D + P + + Q
Sbjct: 73 GKDS--QSPLQIPQSSPEGDDTQSPLQNSQSSPEG----KDSLSPLEISQSPPEGEDVQS 126
Query: 590 PLGGAASPEVLAPVSKEAADLAPTGPSPRPG-PGLLLDVCTKDLADAPAEELQEKGSPAG 648
PL AS + + + SP G P +L + + + + + +
Sbjct: 127 PLQNPASSFFSSALLSIFQSSPESTQSPFEGFPQSVLQIPVSAASSSTLVSIFQSSPEST 186
Query: 649 PPPSQGQPAARPPKEVPASRLAQQLREEGWNLQTSESLTLAEVYLMMGKPSKLQLEYDWL 708
P +G P + P ++P SR S S TL ++ P + Q ++
Sbjct: 187 QSPFEGFPQS--PLQIPVSR--------------SFSSTLLSIF--QSSPERTQSTFEGF 228
Query: 709 GPGRQDPRPGSLPTALHKQRLLSCLLKLISTEVNPKLALEANTISTASVRPAQEEQSMTP 768
P +P + L L + S A + V P+
Sbjct: 229 AQS-----PLQIPVSPSSSSTLLSLFQSFSERTQSTFEGFAQSSLQIPVSPSFSST---- 279
Query: 769 PGKVVTVSSRSPRCPRNQASLRSSKTFP--PSSAPCSSGLRNPPRPLLVPGPSSTGSNDS 826
+V++ SP R Q++ FP P P SS + L P T S
Sbjct: 280 ---LVSLFQSSPE--RTQSTFEG---FPQSPLQIPVSSSSSSTLLSLFQSSPERTHSTFE 331
Query: 827 D--GGLFAVPTTLPPNSRHGKLFSPSKE-AELTFR-------QHLNSISMQS---DFFLP 873
L +P T +S +F S E A+ TF Q S S S F
Sbjct: 332 GFPQSLLQIPMTSSFSSTLLSIFQSSPESAQSTFEGFPQSPLQIPGSPSFSSTLLSLFQS 391
Query: 874 KPRKLRNRHL---RKPLVVQRTLLPRPSENQSHNVCSFSILSNSSVTGRGSFR------- 923
P + + + PL + T S + SIL +S + + +F
Sbjct: 392 SPERTHSTFEGFPQSPLQIPMT--------SSFSSTLLSILQSSPESAQSAFEGFPQSPL 443
Query: 924 --PIQSSLTKAALSR---------------PIVPKVLPPQATSHLASAIDLAATSA---- 962
P+ SS + LS P P +P ++S ++ + L +S
Sbjct: 444 QIPVSSSFSYTLLSLFQSSPERTHSTFEGFPQSPLQIPVSSSSSSSTLLSLFQSSPECTQ 503
Query: 963 GILSGNP-----LPALDTEGLSGISPL----SSDEVTGAIS----------GQDSTGTHQ 1003
G P +P EG + SPL S E ++S G+DS H
Sbjct: 504 STFEGFPQSPLQIPQSPPEGENTHSPLQIVPSLPEWEDSLSPHYFPQSPPQGEDSLSPHY 563
Query: 1004 DGDTLPTVGGSDPFVSIPSRPEQEPVADSF-------QGSSVLSLSELPKAPLQ-----N 1051
+ P S P P+ E QG +S P++PLQ +
Sbjct: 564 FPQSPPQGEDSLSPHYFPQSPQGEDSLSPHYFPQSPPQGEDSMSPLYFPQSPLQGEEFQS 623
Query: 1052 GLSIPLSSSESSS----------TRLSPPDVSALLDISLP-GPPEDALSQGEPATHISDS 1100
L P+S SS+ + SPP+ + P PPE SQ + S
Sbjct: 624 SLQSPVSICSSSTPSSLPQSFPESSQSPPEGPVQSPLHSPQSPPEGMHSQSPLQSPESAP 683
Query: 1101 IIEIAISSGQYGEGVPLSPAKLNGSDSSKSLPSPSSSPQPHWIASPTHDPQWYP-SDSTD 1159
E ++S Q +P SP L G DS SL P S P+ SP H PQ+ P +
Sbjct: 684 EGEDSLSPLQ----IPQSP--LEGEDSLSSLHFPQSPPEWEDSLSPLHFPQFPPQGEDFQ 737
Query: 1160 SSLSS 1164
SSL S
Sbjct: 738 SSLQS 742
Score = 44.3 bits (103), Expect = 8e-04
Identities = 63/226 (27%), Positives = 95/226 (42%), Gaps = 38/226 (16%)
Query: 1017 FVSIPSRPEQEPVADSFQGSSVLSLSE------------LPKAPLQNGLSIPLSSSESSS 1064
F P P Q PV+ SF ++LSL + P++PLQ IP+SSS SSS
Sbjct: 435 FEGFPQSPLQIPVSSSFS-YTLLSLFQSSPERTHSTFEGFPQSPLQ----IPVSSSSSSS 489
Query: 1065 TRL----SPPDVSALLDISLPGPPEDALSQGEPATHISDSIIEIAISSGQYGEGV----- 1115
T L S P+ + P P + Q P + S ++I S ++ + +
Sbjct: 490 TLLSLFQSSPECTQSTFEGFPQSPLQ-IPQSPPEGENTHSPLQIVPSLPEWEDSLSPHYF 548
Query: 1116 PLSPAKLNGSDSSKSLPSPSSSPQPHWIASPTHDPQWYPSDSTDSSLSSLFASFISPEKS 1175
P SP + G DS P S PQ SP + PQ S + SLS + P+
Sbjct: 549 PQSPPQ--GEDSLSPHYFPQSPPQGEDSLSPHYFPQ---SPQGEDSLSPHYFPQSPPQGE 603
Query: 1176 RKMLP-----TPI-GTNSGTSLLGPSLLDGNSRDSFVSRSLADVAE 1215
M P +P+ G +SL P + +S S + +S + ++
Sbjct: 604 DSMSPLYFPQSPLQGEEFQSSLQSPVSICSSSTPSSLPQSFPESSQ 649
Score = 42.7 bits (99), Expect = 0.002
Identities = 77/281 (27%), Positives = 115/281 (40%), Gaps = 40/281 (14%)
Query: 971 PALDTEGLSGISPLSSDEVTGAISGQDSTGTHQDGDTLPTVGGSDPFVSIPSRPEQEPVA 1030
P EG+ SPL S E A G+DS Q + + G D S+ P+ P
Sbjct: 663 PQSPPEGMHSQSPLQSPE--SAPEGEDSLSPLQIPQS--PLEGEDSLSSLHF-PQSPP-- 715
Query: 1031 DSFQGSSVLSLSELPKAP-----LQNGLSIPLSSSESSSTRLSPPDVSALLDISLPGPPE 1085
+ LS P+ P Q+ L P+S SSST LS P S P P
Sbjct: 716 ---EWEDSLSPLHFPQFPPQGEDFQSSLQSPVSIC-SSSTSLSLPQSFPESPQSPPEGPA 771
Query: 1086 DALSQGEPATHISDSIIEIAISSGQYGEGVPLSPAKLNGSDSSKSLPSPSSSPQPHWIAS 1145
+ Q ++ S ++ + SS + + P PA+ S PS +SS +S
Sbjct: 772 QSPLQRPVSSFFSYTLASLLQSSHESPQSPPEGPAQSPLQSPVSSFPSSTSSSLSQ--SS 829
Query: 1146 PTHDPQWYPSDSTDSSLSSLFASFISPEKSRKMLPTPIGTNSGTSLLGPSLLDGNSR-DS 1204
P +PS ST SSLS SPE L +P+ + S ++ L P + +S D
Sbjct: 830 PVSS---FPS-STSSSLSK-----SSPESP---LQSPVISFSSSTSLSPFSEESSSPVDE 877
Query: 1205 FVSR--------SLADVAEVVDSQ-LVCMMNENSIDYISRF 1236
+ S SL D +++S+ L + +D ++RF
Sbjct: 878 YTSSSDTLLESDSLTDSESLIESEPLFTYTLDEKVDELARF 918
Score = 35.4 bits (80), Expect = 0.35
Identities = 91/385 (23%), Positives = 145/385 (37%), Gaps = 54/385 (14%)
Query: 812 PLLVPGPSSTGSNDSDGGLFAVPTTLPPNSRHGKLFSPSKEAELTFRQHLNSISMQSDFF 871
P L+ S + + +G P +P +S P + L Q S S D
Sbjct: 12 PSLLQSSSESPQSCPEGEDSQSPLQIPQSS-------PESDDTLYPLQSPQSRSEGEDSS 64
Query: 872 LPKPRKLRNRHLRKPLVVQRTLLPRPSENQS--HNVCSFSILSNSSVTGRGSFRPIQSSL 929
P R + + PL + ++ P + QS N S SS G+ S P++ +
Sbjct: 65 DPLQRPPEGKDSQSPLQIPQSS-PEGDDTQSPLQN-------SQSSPEGKDSLSPLE--I 114
Query: 930 TKAALSRPIVPKVLPPQATSHLASAIDLAATSAGILSGNPLPALDTEGLS-GISPLSSDE 988
+++ V L A+S +SA+ S+ + +P L +S SS
Sbjct: 115 SQSPPEGEDVQSPLQNPASSFFSSALLSIFQSSPESTQSPFEGFPQSVLQIPVSAASSST 174
Query: 989 VTGAI-SGQDSTGTHQDGDTLPTVGGSDPFVSIPSRPEQEPVADSFQGSSVLSLSELPKA 1047
+ S +ST PF P P Q PV+ SF + + P+
Sbjct: 175 LVSIFQSSPEST--------------QSPFEGFPQSPLQIPVSRSFSSTLLSIFQSSPER 220
Query: 1048 P-------LQNGLSIPLSSSESSSTRLSPPDVSALLDISLPGPPEDALSQGEPATHISDS 1100
Q+ L IP+S S SS+ S + G + +L Q + S +
Sbjct: 221 TQSTFEGFAQSPLQIPVSPSSSSTLLSLFQSFSERTQSTFEGFAQSSL-QIPVSPSFSST 279
Query: 1101 IIEIAISSGQYG----EGVPLSPAKLNGSDSSKS--LPSPSSSPQ---PHWIASPTHDPQ 1151
++ + SS + EG P SP ++ S SS S L SSP+ + P Q
Sbjct: 280 LVSLFQSSPERTQSTFEGFPQSPLQIPVSSSSSSTLLSLFQSSPERTHSTFEGFPQSLLQ 339
Query: 1152 WYPSDSTDSSLSSLFASFISPEKSR 1176
+ S S+L S+F S SPE ++
Sbjct: 340 IPMTSSFSSTLLSIFQS--SPESAQ 362
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 47.0 bits (110), Expect = 1e-04
Identities = 36/109 (33%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 34 GGADAAEESSGTKRDEKTPRAGAD---GPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQ 90
GG+ + S + + P G + GPP PPG PQ P PPQG + Q P
Sbjct: 290 GGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP-PPQGGNKPQG-------PPP 341
Query: 91 SKRPRKDPPSAVGSGNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGS 139
+P+ PP GS + P GK +G GN + P PAGG+
Sbjct: 342 PGKPQGPPPQG-GSKSRSARSPPGK-PQGPPQQEGN-NPQGPPPPAGGN 387
Score = 42.4 bits (98), Expect = 0.003
Identities = 40/141 (28%), Positives = 51/141 (36%), Gaps = 22/141 (15%)
Query: 34 GGADAAEESSGTKRDEKTPRAG--ADGPPAPPGAPQAPSP--------------PQGSPQ 77
G + S K P+ G GPP PPG PQ P P PQG P
Sbjct: 105 GDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP 164
Query: 78 DQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGK----GAEGGGSSSGNVSGVAPA 133
+ RSS P K P+ PP G+ G P GK +GG G P
Sbjct: 165 QGDNKSRSSRSPPGK-PQGPPPQG-GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQ 222
Query: 134 APAGGSRSSSRNLGSSGGEKE 154
P + S++ S G+ +
Sbjct: 223 GPPPQGDNKSQSARSPPGKPQ 243
Score = 41.6 bits (96), Expect = 0.005
Identities = 39/136 (28%), Positives = 46/136 (33%), Gaps = 28/136 (20%)
Query: 33 AGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQSK 92
AG A G K GPP+PPG PQ P PPQG Q Q P
Sbjct: 33 AGNPQGAPPQGGNK---------PQGPPSPPGKPQGP-PPQGGNQPQ------GPPPPPG 76
Query: 93 RPRKDPPSAVGS-------GNAGGSGPRGKGAEGGGSSSGNVSGVAPAA---PAGGSRSS 142
+P+ PP G G P+G + S G G P P G
Sbjct: 77 KPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPP 136
Query: 143 SRNLG--SSGGEKEEG 156
+ G GG K +G
Sbjct: 137 GKPQGPPPQGGNKPQG 152
Score = 41.6 bits (96), Expect = 0.005
Identities = 35/115 (30%), Positives = 44/115 (38%), Gaps = 20/115 (17%)
Query: 58 GPPAPPGAPQAPSP--------------PQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVG 103
GPP PPG PQ P P PQG P + +S+ P K P+ PP G
Sbjct: 193 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGK-PQGPPPQG-G 250
Query: 104 SGNAGGSGPRGK----GAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKE 154
+ G P GK +GG G P P S SR+ S G+ +
Sbjct: 251 NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQ 305
Score = 41.2 bits (95), Expect = 0.006
Identities = 41/142 (28%), Positives = 50/142 (35%), Gaps = 19/142 (13%)
Query: 31 EGAGGADAAEESSGTKRDEKTPRAG--ADGPPAPPGAPQAPSP----------PQGSPQD 78
+G + +A G K P+ G GPP PPG PQ P P P G PQ
Sbjct: 227 QGDNKSQSARSPPG-KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG 285
Query: 79 QHHFLRSSVRPQSKRPRK--DPPSAVGSGNAGGSGPRGK----GAEGGGSSSGNVSGVAP 132
S R P K PP G+ G P GK +GG G P
Sbjct: 286 PPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKP 345
Query: 133 AAPAGGSRSSSRNLGSSGGEKE 154
P S SR+ S G+ +
Sbjct: 346 QGPPPQGGSKSRSARSPPGKPQ 367
Score = 39.3 bits (90), Expect = 0.024
Identities = 54/197 (27%), Positives = 65/197 (32%), Gaps = 26/197 (13%)
Query: 470 GKGVGRPPPAADALQSSGES---SPESAPGEGAALSLSSPDAPDRPPPRHQDTGPCLEKT 526
GK G PPP D S S P+ P +G + P P PPP + GP
Sbjct: 157 GKPQG-PPPQGDNKSRSSRSPPGKPQGPPPQGG----NQPQGP--PPPPGKPQGP----- 204
Query: 527 PAEGRDSPTREPGALPCACGQLPDLEDELSLLDPLPRYLKSCQDLIVPEQCRCADTRPGS 586
P +G + P P P P D S P Q + PG
Sbjct: 205 PPQGGNKPQGPPP--PGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGK 262
Query: 587 EQ-PPLGGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEELQEKGS 645
Q PP G P+ P K P GP P+ G P Q
Sbjct: 263 PQGPPPQGGNKPQGPPPPGK------PQGPPPQGGSKSRSSRSPPGKPQGPPP--QGGNQ 314
Query: 646 PAGPPPSQGQPAARPPK 662
P GPPP G+P PP+
Sbjct: 315 PQGPPPPPGKPQGPPPQ 331
Score = 38.9 bits (89), Expect = 0.032
Identities = 48/207 (23%), Positives = 66/207 (31%), Gaps = 48/207 (23%)
Query: 464 PRSGAEGKGVGRPPPAADALQSSGESSPESAP---GEGAALSLSSPDAPDRPPPRHQDTG 520
P+ G + +G PP G + P+ P G+ + P PPP + G
Sbjct: 41 PQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG 100
Query: 521 PCLEKTPAEGRDSPTREPGALPCACGQLPDLEDELSLLDPLPRYLKSCQDLIVPEQCRCA 580
P + + SP +P P G P P P
Sbjct: 101 PPPQGDKSRSPRSPPGKPQGPPPQGGNQPQ--------GPPPP----------------- 135
Query: 581 DTRPGSEQ-PPLGGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEE 639
PG Q PP G P+ P K P GP P+ D ++ P +
Sbjct: 136 ---PGKPQGPPPQGGNKPQGPPPPGK------PQGPPPQG------DNKSRSSRSPPGKP 180
Query: 640 L----QEKGSPAGPPPSQGQPAARPPK 662
Q P GPPP G+P PP+
Sbjct: 181 QGPPPQGGNQPQGPPPPPGKPQGPPPQ 207
Score = 38.1 bits (87), Expect = 0.054
Identities = 58/229 (25%), Positives = 73/229 (31%), Gaps = 28/229 (12%)
Query: 443 PPAQILGIQSGQGTARGQVKCPRSGAEGKGVGRPPPA---ADALQSSGESSPESAPGEGA 499
PP Q G G+ + P K G PPP Q SP S PG+
Sbjct: 60 PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQ 119
Query: 500 ALSLSSPDAPDRPPPRH-QDTGPCLEKTPAEGRDSPTREPGALPCACGQLPDLEDELSLL 558
+ P PPP + GP P +G + P P P P D S
Sbjct: 120 GPPPQGGNQPQGPPPPPGKPQGP-----PPQGGNKPQGPPP--PGKPQGPPPQGDNKSRS 172
Query: 559 DPLPRYLKSCQDLIVPEQCRCADTRPGSEQ-PPLGGAASPEVLAPVSKEAADLAPTGPSP 617
P Q + PG Q PP G P+ P K P GP P
Sbjct: 173 SRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGK------PQGPPP 226
Query: 618 RPGPGLLLDVCTKDLADAPAEEL----QEKGSPAGPPPSQGQPAARPPK 662
+ D ++ P + Q P GPPP G+P PP+
Sbjct: 227 QG------DNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ 269
Score = 37.7 bits (86), Expect = 0.070
Identities = 47/205 (22%), Positives = 63/205 (30%), Gaps = 56/205 (27%)
Query: 464 PRSGAEGKGVGRPPPAADALQSSGESSPESAPGEGAALSLSSPDAPDRPPPRHQDTGPCL 523
P+ G + +G PP G + P+ P P P PPP+ +
Sbjct: 185 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPP---------PPGKPQGPPPQGDNKSQSA 235
Query: 524 EKTPAEGRDSPTR---EPGALPCACG--QLPDLEDELSLLDPLPRYLKSCQDLIVPEQCR 578
P + + P + +P P G Q P + P P
Sbjct: 236 RSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPP---------------- 279
Query: 579 CADTRPGSEQ--PPLGGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAP 636
PG Q PP GG+ S +P K P GP P+ G + P
Sbjct: 280 -----PGKPQGPPPQGGSKSRSSRSPPGK------PQGPPPQGG-------------NQP 315
Query: 637 AEELQEKGSPAGPPPSQGQPAARPP 661
G P GPPP G PP
Sbjct: 316 QGPPPPPGKPQGPPPQGGNKPQGPP 340
Score = 37.0 bits (84), Expect = 0.12
Identities = 32/124 (25%), Positives = 44/124 (35%), Gaps = 20/124 (16%)
Query: 41 ESSGTKRDEKTPRAGADGPPAPPG-APQAPSPPQGSPQDQHHFLRSSVRPQSK----RPR 95
+ R ++P GPP G PQ P PP G PQ + +PQ +P+
Sbjct: 165 QGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP--QGGNKPQGPPPPGKPQ 222
Query: 96 KDPPSAVGSGNAGGS---GPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGE 152
PP + S P+G +GG G P P G + GG
Sbjct: 223 GPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQG------PPPPPGKPQGPP----PQGGN 272
Query: 153 KEEG 156
K +G
Sbjct: 273 KPQG 276
Score = 36.2 bits (82), Expect = 0.20
Identities = 50/198 (25%), Positives = 64/198 (32%), Gaps = 28/198 (14%)
Query: 470 GKGVGRPPPAADALQS--SGESSPESAPGEGAALSLSSPDAPDRPPPRHQDTGPCLEKTP 527
GK G PP + QS S P+ P +G P P +P G + P
Sbjct: 219 GKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPP 278
Query: 528 AEGRDSPTREPGALPCACGQLPDLEDELSLLDPLPRYLKSCQDLIVPEQCRCADTRPGSE 587
G+ G + P + + P P+ Q P PG
Sbjct: 279 PPGKPQGPPPQGGSKSRSSRSPPGKPQ----GPPPQGGNQPQGPPPP---------PGKP 325
Query: 588 Q-PPLGGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEELQEKGSP 646
Q PP G P+ P K P GP P+ G P + QE +P
Sbjct: 326 QGPPPQGGNKPQGPPPPGK------PQGPPPQGGSKSRSARSPPGKPQGPPQ--QEGNNP 377
Query: 647 AGPPPSQG----QPAARP 660
GPPP G QP A P
Sbjct: 378 QGPPPPAGGNPQQPQAPP 395
Score = 32.0 bits (71), Expect = 3.9
Identities = 32/119 (26%), Positives = 43/119 (36%), Gaps = 22/119 (18%)
Query: 47 RDEKTPRAGADGPPAPPGAPQ--APSPPQGSPQDQHHFLRSSVRPQSK----RPRKDPPS 100
R ++P GPP P G Q P PP G PQ + +PQ +P+ PP
Sbjct: 109 RSPRSPPGKPQGPP-PQGGNQPQGPPPPPGKPQGPPP--QGGNKPQGPPPPGKPQGPPPQ 165
Query: 101 AVGSGNAGGS---GPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEG 156
+ S P+G +GG G P P G + GG K +G
Sbjct: 166 GDNKSRSSRSPPGKPQGPPPQGGNQPQG------PPPPPGKPQGPP----PQGGNKPQG 214
Score = 30.8 bits (68), Expect = 8.6
Identities = 30/107 (28%), Positives = 34/107 (31%), Gaps = 40/107 (37%)
Query: 52 PRAGADGP--PAPPGAPQAPSP---------------PQGSPQDQHHFLRSSVRPQSKRP 94
P G + P P PPG PQ P P PQG PQ + P
Sbjct: 329 PPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQ-----------EGNNP 377
Query: 95 RKDPPSAVGSGNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRS 141
+ PP A G P+ A G G P P GG S
Sbjct: 378 QGPPPPA-------GGNPQQPQAPPAGQPQG-----PPRPPQGGRPS 412
Score = 30.8 bits (68), Expect = 8.6
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
Query: 34 GGADAAEESSGTKRDEKTPRAGADGPPAPP----GAPQAP-SPPQGSPQDQHHFLRSSVR 88
GG+ + S + + P+ + P PP G PQ P +PP G PQ
Sbjct: 352 GGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPR------P 405
Query: 89 PQSKRPRKDP 98
PQ RP + P
Sbjct: 406 PQGGRPSRPP 415
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 46.6 bits (109), Expect = 2e-04
Identities = 46/169 (27%), Positives = 57/169 (33%), Gaps = 41/169 (24%)
Query: 9 GSGEDGLKKLGKRAADEESLEGEG-----------AGGADAAEESSGTKRDEKTP----- 52
GS ED + A+ E+LEG G + EE KR + P
Sbjct: 94 GSKEDAAQFAAGMASALEALEGGGPPPPPALPTWSVPNGPSPEEVEQQKRQQPGPSEHIE 153
Query: 53 ----RAG------ADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAV 102
AG A GPP PPG P P PP P P P +A
Sbjct: 154 RRVSNAGGPPAPPAGGPPPPPGPPPPPGPPP---------------PPGLPPSGVPAAAH 198
Query: 103 GSGNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGG 151
G+G P A+G G G+A A R S+ +SGG
Sbjct: 199 GAGGGPPPAPPLPAAQGPGGGGAGAPGLAAAIAGAKLRKVSKQEEASGG 247
Score = 34.7 bits (78), Expect = 0.60
Identities = 27/87 (31%), Positives = 32/87 (36%), Gaps = 17/87 (19%)
Query: 592 GGAASPEVLAPVSKEAADLAPTGPSP---------RPGPGLLLDVCTKDLADAPAEELQE 642
GG P L S P GPSP +PGP ++ + PA
Sbjct: 116 GGPPPPPALPTWS------VPNGPSPEEVEQQKRQQPGPSEHIERRVSNAGGPPAPPAGG 169
Query: 643 KGSPAGPPPSQG--QPAARPPKEVPAS 667
P GPPP G P PP VPA+
Sbjct: 170 PPPPPGPPPPPGPPPPPGLPPSGVPAA 196
>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein
[Homo sapiens]
Length = 1650
Score = 46.6 bits (109), Expect = 2e-04
Identities = 44/165 (26%), Positives = 58/165 (35%), Gaps = 18/165 (10%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPPAPPG--- 64
G SGE G + L ++ G G ++G + T +G DGP PPG
Sbjct: 734 GASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGT--SGGDGPHGPPGERG 791
Query: 65 --APQA----------PSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVG-SGNAGGSG 111
PQ P PP H R V Q K PP VG G AG +G
Sbjct: 792 LPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETG 851
Query: 112 PRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEG 156
P G+ G G+ A G++ G+ G + G
Sbjct: 852 PMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAG 896
Score = 41.6 bits (96), Expect = 0.005
Identities = 37/132 (28%), Positives = 43/132 (32%), Gaps = 6/132 (4%)
Query: 31 EGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQ 90
+G GA + G K DE T G +GPP P G P P + P
Sbjct: 1039 DGEPGARGPQGHFGAKGDEGT--RGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPP 1096
Query: 91 SKRPRKDPPSAVGS----GNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNL 146
R P A G G G GP G+ E G S S + G G R
Sbjct: 1097 GPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGES 1156
Query: 147 GSSGGEKEEGKK 158
G G G K
Sbjct: 1157 GQPGEPGPPGPK 1168
Score = 41.6 bits (96), Expect = 0.005
Identities = 52/172 (30%), Positives = 64/172 (37%), Gaps = 36/172 (20%)
Query: 6 GDGGS----GEDGLK-KLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPP 60
G+ GS GE G+K G+R ES G G G D+ G G P
Sbjct: 1130 GESGSPGIQGEPGVKGPRGERGEKGES----GQPGEPGPPGPKGPTGDD-----GPKGNP 1180
Query: 61 APPGAPQAPSPP-QGSPQDQHHFLRSSV------RPQSKRPRKD--PPSAVGS-GNAGGS 110
P G P P PP +G P+ Q +P S P + PP +G G AG
Sbjct: 1181 GPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSP 1240
Query: 111 GPRG-------KGAEGGGSSSGNVSGVAPAAPAG-----GSRSSSRNLGSSG 150
G G KG G + G V PA PAG G R ++G G
Sbjct: 1241 GSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQG 1292
Score = 40.4 bits (93), Expect = 0.011
Identities = 45/176 (25%), Positives = 60/176 (34%), Gaps = 28/176 (15%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAG-GADAAEESSGTKRDEKTP----RAGADGPPAP 62
G G+DG L + E L G G G E SG +P AG+ GP P
Sbjct: 887 GAPGKDGPAGL-RGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGP 945
Query: 63 PGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVG----SGNAGGSGPRG---- 114
PG P PP + + + + P + + P G G AG G +G
Sbjct: 946 PGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGD 1005
Query: 115 ---KGAEGGGSSSGNVSGVAPAAPAG-----------GSRSSSRNLGSSGGEKEEG 156
KG +G G P P G G+R + G+ G E G
Sbjct: 1006 PGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRG 1061
Score = 37.0 bits (84), Expect = 0.12
Identities = 37/130 (28%), Positives = 46/130 (35%), Gaps = 18/130 (13%)
Query: 31 EGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQ 90
+G G G K + P G GPP P G P P+G+P P
Sbjct: 1138 QGEPGVKGPRGERGEKGESGQP--GEPGPPGPKG-PTGDDGPKGNPG-----------PV 1183
Query: 91 SKRPRKDPPSAVGS-GNAGGSGPRGKGAEGGGSSSGNVSGV-APAAPAG--GSRSSSRNL 146
PP G G G G RG+ E G S +G P P G G S +
Sbjct: 1184 GFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSE 1243
Query: 147 GSSGGEKEEG 156
G GG+ +G
Sbjct: 1244 GRQGGKGAKG 1253
Score = 36.6 bits (83), Expect = 0.16
Identities = 39/169 (23%), Positives = 52/169 (30%), Gaps = 14/169 (8%)
Query: 6 GDGGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTP----RAGADGPPA 61
G G G+ G + G G D G+ + P +AG GP
Sbjct: 1248 GKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVG 1307
Query: 62 PPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDP---PSAVGS-------GNAGGSG 111
PPG P + H L + P ++ K P GS G G SG
Sbjct: 1308 PPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPGASG 1367
Query: 112 PRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGKKVR 160
P G G G G A GG + G G G+ ++
Sbjct: 1368 PIGPGGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPPGEVIQ 1416
Score = 36.2 bits (82), Expect = 0.20
Identities = 38/138 (27%), Positives = 52/138 (37%), Gaps = 14/138 (10%)
Query: 32 GAGGAD-----AAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSP--PQGSPQDQHHFLR 84
G+GG D AA+E+ ++ R GPP P G P P GSP +
Sbjct: 371 GSGGGDKGPVVAAQEAQAQAILQQA-RLALRGPPGPMGYTGRPGPLGQPGSPGLKGE--S 427
Query: 85 SSVRPQSKRPRK---DPPSAVG-SGNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSR 140
+ PQ R + PP G G AG G RG + G G+ G R
Sbjct: 428 GDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHR 487
Query: 141 SSSRNLGSSGGEKEEGKK 158
+ G G E+G++
Sbjct: 488 GDTGAQGLPGPPGEDGER 505
Score = 35.4 bits (80), Expect = 0.35
Identities = 48/161 (29%), Positives = 58/161 (36%), Gaps = 25/161 (15%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGE-GAGGADAAEESSGTKRD--EKTPRA--GADGPPA- 61
G G DGL L E+ G+ GA G G + D E PR G GP
Sbjct: 470 GDRGFDGLPGL----PGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGL 525
Query: 62 --PPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGS-GNAGGSGPRG---- 114
P G P P PP D + S+ PQ + PP G+ G G GP+G
Sbjct: 526 LGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGE---PGPPGQQGTPGTQGLPGPQGAIGP 582
Query: 115 ---KGAEGGGSSSGNVSGVAPAAPAG--GSRSSSRNLGSSG 150
KG +G G P G G + N G SG
Sbjct: 583 HGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSG 623
Score = 35.4 bits (80), Expect = 0.35
Identities = 41/150 (27%), Positives = 51/150 (34%), Gaps = 26/150 (17%)
Query: 31 EGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGA--PQAPSPPQGSPQDQHHFLRSSVR 88
+G G+ + G + TP G G P P GA P PQG P + S
Sbjct: 547 QGPKGSLGPQGEPGPPGQQGTP--GTQGLPGPQGAIGPHGEKGPQGKPGLPG--MPGSDG 602
Query: 89 PQSKRPRKDPPSAVGSGNAGGSGPRG----------KGAEG--------GGSSSGNVSGV 130
P ++ PP GN G SGP+G KG +G G G
Sbjct: 603 PPGHPGKEGPPGT--KGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGF 660
Query: 131 APAAPAGGSRSSSRNLGSSGGEKEEGKKVR 160
G R GS G + EG K R
Sbjct: 661 KGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 690
Score = 34.3 bits (77), Expect = 0.78
Identities = 33/113 (29%), Positives = 38/113 (33%), Gaps = 13/113 (11%)
Query: 55 GADGPPAPPGAPQAPSPP--------QGSPQDQHHFLRSSVR-PQSKRPRKDPPSAVGS- 104
GADGP PPG PP GSP Q V+ P+ +R K G
Sbjct: 1106 GADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGE---PGVKGPRGERGEKGESGQPGEP 1162
Query: 105 GNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGK 157
G G GP G G G GG R G G + E G+
Sbjct: 1163 GPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQ 1215
Score = 33.9 bits (76), Expect = 1.0
Identities = 32/115 (27%), Positives = 37/115 (32%), Gaps = 10/115 (8%)
Query: 54 AGADGPPAPPGAPQAPSPP--QGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGS------- 104
AG GP G P P PP QG P P KD P+ +
Sbjct: 847 AGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGL 906
Query: 105 -GNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGKK 158
G AGG G +G G G AA +GG G G G+K
Sbjct: 907 PGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEK 961
Score = 32.3 bits (72), Expect = 3.0
Identities = 58/217 (26%), Positives = 72/217 (33%), Gaps = 27/217 (12%)
Query: 452 SGQGTARGQVKCPRSGAEGKGVGRPPPAADALQSSGESSPESAPGEGAALSLSSPDAPDR 511
SG+ ARG SG G R P G+ P A G+ A S D P
Sbjct: 736 SGEKGARGL-----SGKSGPRGERGPTGP-----RGQRGPRGATGKSGAKGTSGGDGPHG 785
Query: 512 PPPRHQDTGPCLEKTPAEGRDSPTREPG--ALPCACGQLPDLEDELSLLDPLPRYLKSCQ 569
PP GP G P PG LP GQ ++ + P P
Sbjct: 786 PPGERGLPGP-QGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGP------- 837
Query: 570 DLIVPEQCRCADTRPGSEQ---PPLGGAASPEVLAPVSKEA--ADLAPTGPSPRPGP-GL 623
+V Q +T P E+ P G + KE D P G + GP GL
Sbjct: 838 PGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGL 897
Query: 624 LLDVCTKDL-ADAPAEELQEKGSPAGPPPSQGQPAAR 659
+ L A L+ P+GPP G P R
Sbjct: 898 RGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGER 934
Score = 31.2 bits (69), Expect = 6.6
Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 12/112 (10%)
Query: 55 GADGPPAPPGAP-------QAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNA 107
G+DG P PPG + +G ++ Q++ + PP + G
Sbjct: 352 GSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLALRGPPGPM--GYT 409
Query: 108 GGSGPRGK-GAEGGGSSSGNVSGVAPAAPAG--GSRSSSRNLGSSGGEKEEG 156
G GP G+ G+ G SG++ P P G G + G +G + G
Sbjct: 410 GRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARG 461
>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein
[Homo sapiens]
Length = 1629
Score = 46.6 bits (109), Expect = 2e-04
Identities = 44/165 (26%), Positives = 58/165 (35%), Gaps = 18/165 (10%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPPAPPG--- 64
G SGE G + L ++ G G ++G + T +G DGP PPG
Sbjct: 713 GASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGT--SGGDGPHGPPGERG 770
Query: 65 --APQA----------PSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVG-SGNAGGSG 111
PQ P PP H R V Q K PP VG G AG +G
Sbjct: 771 LPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETG 830
Query: 112 PRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEG 156
P G+ G G+ A G++ G+ G + G
Sbjct: 831 PMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAG 875
Score = 41.6 bits (96), Expect = 0.005
Identities = 37/132 (28%), Positives = 43/132 (32%), Gaps = 6/132 (4%)
Query: 31 EGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQ 90
+G GA + G K DE T G +GPP P G P P + P
Sbjct: 1018 DGEPGARGPQGHFGAKGDEGT--RGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPP 1075
Query: 91 SKRPRKDPPSAVGS----GNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNL 146
R P A G G G GP G+ E G S S + G G R
Sbjct: 1076 GPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGES 1135
Query: 147 GSSGGEKEEGKK 158
G G G K
Sbjct: 1136 GQPGEPGPPGPK 1147
Score = 41.6 bits (96), Expect = 0.005
Identities = 52/172 (30%), Positives = 64/172 (37%), Gaps = 36/172 (20%)
Query: 6 GDGGS----GEDGLK-KLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPP 60
G+ GS GE G+K G+R ES G G G D+ G G P
Sbjct: 1109 GESGSPGIQGEPGVKGPRGERGEKGES----GQPGEPGPPGPKGPTGDD-----GPKGNP 1159
Query: 61 APPGAPQAPSPP-QGSPQDQHHFLRSSV------RPQSKRPRKD--PPSAVGS-GNAGGS 110
P G P P PP +G P+ Q +P S P + PP +G G AG
Sbjct: 1160 GPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSP 1219
Query: 111 GPRG-------KGAEGGGSSSGNVSGVAPAAPAG-----GSRSSSRNLGSSG 150
G G KG G + G V PA PAG G R ++G G
Sbjct: 1220 GSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQG 1271
Score = 40.4 bits (93), Expect = 0.011
Identities = 45/176 (25%), Positives = 60/176 (34%), Gaps = 28/176 (15%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAG-GADAAEESSGTKRDEKTP----RAGADGPPAP 62
G G+DG L + E L G G G E SG +P AG+ GP P
Sbjct: 866 GAPGKDGPAGL-RGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGP 924
Query: 63 PGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVG----SGNAGGSGPRG---- 114
PG P PP + + + + P + + P G G AG G +G
Sbjct: 925 PGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGD 984
Query: 115 ---KGAEGGGSSSGNVSGVAPAAPAG-----------GSRSSSRNLGSSGGEKEEG 156
KG +G G P P G G+R + G+ G E G
Sbjct: 985 PGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRG 1040
Score = 37.0 bits (84), Expect = 0.12
Identities = 37/130 (28%), Positives = 46/130 (35%), Gaps = 18/130 (13%)
Query: 31 EGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQ 90
+G G G K + P G GPP P G P P+G+P P
Sbjct: 1117 QGEPGVKGPRGERGEKGESGQP--GEPGPPGPKG-PTGDDGPKGNPG-----------PV 1162
Query: 91 SKRPRKDPPSAVGS-GNAGGSGPRGKGAEGGGSSSGNVSGV-APAAPAG--GSRSSSRNL 146
PP G G G G RG+ E G S +G P P G G S +
Sbjct: 1163 GFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSE 1222
Query: 147 GSSGGEKEEG 156
G GG+ +G
Sbjct: 1223 GRQGGKGAKG 1232
Score = 36.6 bits (83), Expect = 0.16
Identities = 39/169 (23%), Positives = 52/169 (30%), Gaps = 14/169 (8%)
Query: 6 GDGGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTP----RAGADGPPA 61
G G G+ G + G G D G+ + P +AG GP
Sbjct: 1227 GKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVG 1286
Query: 62 PPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDP---PSAVGS-------GNAGGSG 111
PPG P + H L + P ++ K P GS G G SG
Sbjct: 1287 PPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPGASG 1346
Query: 112 PRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGKKVR 160
P G G G G A GG + G G G+ ++
Sbjct: 1347 PIGPGGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPPGEVIQ 1395
Score = 36.2 bits (82), Expect = 0.20
Identities = 38/138 (27%), Positives = 52/138 (37%), Gaps = 14/138 (10%)
Query: 32 GAGGAD-----AAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSP--PQGSPQDQHHFLR 84
G+GG D AA+E+ ++ R GPP P G P P GSP +
Sbjct: 350 GSGGGDKGPVVAAQEAQAQAILQQA-RLALRGPPGPMGYTGRPGPLGQPGSPGLKGE--S 406
Query: 85 SSVRPQSKRPRK---DPPSAVG-SGNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSR 140
+ PQ R + PP G G AG G RG + G G+ G R
Sbjct: 407 GDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHR 466
Query: 141 SSSRNLGSSGGEKEEGKK 158
+ G G E+G++
Sbjct: 467 GDTGAQGLPGPPGEDGER 484
Score = 35.4 bits (80), Expect = 0.35
Identities = 48/161 (29%), Positives = 58/161 (36%), Gaps = 25/161 (15%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGE-GAGGADAAEESSGTKRD--EKTPRA--GADGPPA- 61
G G DGL L E+ G+ GA G G + D E PR G GP
Sbjct: 449 GDRGFDGLPGL----PGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGL 504
Query: 62 --PPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGS-GNAGGSGPRG---- 114
P G P P PP D + S+ PQ + PP G+ G G GP+G
Sbjct: 505 LGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGE---PGPPGQQGTPGTQGLPGPQGAIGP 561
Query: 115 ---KGAEGGGSSSGNVSGVAPAAPAG--GSRSSSRNLGSSG 150
KG +G G P G G + N G SG
Sbjct: 562 HGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSG 602
Score = 35.4 bits (80), Expect = 0.35
Identities = 41/150 (27%), Positives = 51/150 (34%), Gaps = 26/150 (17%)
Query: 31 EGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGA--PQAPSPPQGSPQDQHHFLRSSVR 88
+G G+ + G + TP G G P P GA P PQG P + S
Sbjct: 526 QGPKGSLGPQGEPGPPGQQGTP--GTQGLPGPQGAIGPHGEKGPQGKPGLPG--MPGSDG 581
Query: 89 PQSKRPRKDPPSAVGSGNAGGSGPRG----------KGAEG--------GGSSSGNVSGV 130
P ++ PP GN G SGP+G KG +G G G
Sbjct: 582 PPGHPGKEGPPGT--KGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGF 639
Query: 131 APAAPAGGSRSSSRNLGSSGGEKEEGKKVR 160
G R GS G + EG K R
Sbjct: 640 KGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 669
Score = 34.3 bits (77), Expect = 0.78
Identities = 33/113 (29%), Positives = 38/113 (33%), Gaps = 13/113 (11%)
Query: 55 GADGPPAPPGAPQAPSPP--------QGSPQDQHHFLRSSVR-PQSKRPRKDPPSAVGS- 104
GADGP PPG PP GSP Q V+ P+ +R K G
Sbjct: 1085 GADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGE---PGVKGPRGERGEKGESGQPGEP 1141
Query: 105 GNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGK 157
G G GP G G G GG R G G + E G+
Sbjct: 1142 GPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQ 1194
Score = 33.9 bits (76), Expect = 1.0
Identities = 32/115 (27%), Positives = 37/115 (32%), Gaps = 10/115 (8%)
Query: 54 AGADGPPAPPGAPQAPSPP--QGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGS------- 104
AG GP G P P PP QG P P KD P+ +
Sbjct: 826 AGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGL 885
Query: 105 -GNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGKK 158
G AGG G +G G G AA +GG G G G+K
Sbjct: 886 PGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEK 940
Score = 32.3 bits (72), Expect = 3.0
Identities = 58/217 (26%), Positives = 72/217 (33%), Gaps = 27/217 (12%)
Query: 452 SGQGTARGQVKCPRSGAEGKGVGRPPPAADALQSSGESSPESAPGEGAALSLSSPDAPDR 511
SG+ ARG SG G R P G+ P A G+ A S D P
Sbjct: 715 SGEKGARGL-----SGKSGPRGERGPTGP-----RGQRGPRGATGKSGAKGTSGGDGPHG 764
Query: 512 PPPRHQDTGPCLEKTPAEGRDSPTREPG--ALPCACGQLPDLEDELSLLDPLPRYLKSCQ 569
PP GP G P PG LP GQ ++ + P P
Sbjct: 765 PPGERGLPGP-QGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGP------- 816
Query: 570 DLIVPEQCRCADTRPGSEQ---PPLGGAASPEVLAPVSKEA--ADLAPTGPSPRPGP-GL 623
+V Q +T P E+ P G + KE D P G + GP GL
Sbjct: 817 PGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGL 876
Query: 624 LLDVCTKDL-ADAPAEELQEKGSPAGPPPSQGQPAAR 659
+ L A L+ P+GPP G P R
Sbjct: 877 RGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGER 913
Score = 31.2 bits (69), Expect = 6.6
Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 12/112 (10%)
Query: 55 GADGPPAPPGAP-------QAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNA 107
G+DG P PPG + +G ++ Q++ + PP + G
Sbjct: 331 GSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLALRGPPGPM--GYT 388
Query: 108 GGSGPRGK-GAEGGGSSSGNVSGVAPAAPAG--GSRSSSRNLGSSGGEKEEG 156
G GP G+ G+ G SG++ P P G G + G +G + G
Sbjct: 389 GRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARG 440
>gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein
[Homo sapiens]
Length = 1736
Score = 46.6 bits (109), Expect = 2e-04
Identities = 44/165 (26%), Positives = 58/165 (35%), Gaps = 18/165 (10%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPPAPPG--- 64
G SGE G + L ++ G G ++G + T +G DGP PPG
Sbjct: 820 GASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGT--SGGDGPHGPPGERG 877
Query: 65 --APQA----------PSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVG-SGNAGGSG 111
PQ P PP H R V Q K PP VG G AG +G
Sbjct: 878 LPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETG 937
Query: 112 PRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEG 156
P G+ G G+ A G++ G+ G + G
Sbjct: 938 PMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAG 982
Score = 41.6 bits (96), Expect = 0.005
Identities = 37/132 (28%), Positives = 43/132 (32%), Gaps = 6/132 (4%)
Query: 31 EGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQ 90
+G GA + G K DE T G +GPP P G P P + P
Sbjct: 1125 DGEPGARGPQGHFGAKGDEGT--RGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPP 1182
Query: 91 SKRPRKDPPSAVGS----GNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNL 146
R P A G G G GP G+ E G S S + G G R
Sbjct: 1183 GPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGES 1242
Query: 147 GSSGGEKEEGKK 158
G G G K
Sbjct: 1243 GQPGEPGPPGPK 1254
Score = 41.6 bits (96), Expect = 0.005
Identities = 52/172 (30%), Positives = 64/172 (37%), Gaps = 36/172 (20%)
Query: 6 GDGGS----GEDGLK-KLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPP 60
G+ GS GE G+K G+R ES G G G D+ G G P
Sbjct: 1216 GESGSPGIQGEPGVKGPRGERGEKGES----GQPGEPGPPGPKGPTGDD-----GPKGNP 1266
Query: 61 APPGAPQAPSPP-QGSPQDQHHFLRSSV------RPQSKRPRKD--PPSAVGS-GNAGGS 110
P G P P PP +G P+ Q +P S P + PP +G G AG
Sbjct: 1267 GPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSP 1326
Query: 111 GPRG-------KGAEGGGSSSGNVSGVAPAAPAG-----GSRSSSRNLGSSG 150
G G KG G + G V PA PAG G R ++G G
Sbjct: 1327 GSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQG 1378
Score = 40.4 bits (93), Expect = 0.011
Identities = 45/176 (25%), Positives = 60/176 (34%), Gaps = 28/176 (15%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGEGAG-GADAAEESSGTKRDEKTP----RAGADGPPAP 62
G G+DG L + E L G G G E SG +P AG+ GP P
Sbjct: 973 GAPGKDGPAGL-RGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGP 1031
Query: 63 PGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVG----SGNAGGSGPRG---- 114
PG P PP + + + + P + + P G G AG G +G
Sbjct: 1032 PGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGD 1091
Query: 115 ---KGAEGGGSSSGNVSGVAPAAPAG-----------GSRSSSRNLGSSGGEKEEG 156
KG +G G P P G G+R + G+ G E G
Sbjct: 1092 PGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRG 1147
Score = 37.0 bits (84), Expect = 0.12
Identities = 37/130 (28%), Positives = 46/130 (35%), Gaps = 18/130 (13%)
Query: 31 EGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQ 90
+G G G K + P G GPP P G P P+G+P P
Sbjct: 1224 QGEPGVKGPRGERGEKGESGQP--GEPGPPGPKG-PTGDDGPKGNPG-----------PV 1269
Query: 91 SKRPRKDPPSAVGS-GNAGGSGPRGKGAEGGGSSSGNVSGV-APAAPAG--GSRSSSRNL 146
PP G G G G RG+ E G S +G P P G G S +
Sbjct: 1270 GFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSE 1329
Query: 147 GSSGGEKEEG 156
G GG+ +G
Sbjct: 1330 GRQGGKGAKG 1339
Score = 36.6 bits (83), Expect = 0.16
Identities = 39/169 (23%), Positives = 52/169 (30%), Gaps = 14/169 (8%)
Query: 6 GDGGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTP----RAGADGPPA 61
G G G+ G + G G D G+ + P +AG GP
Sbjct: 1334 GKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVG 1393
Query: 62 PPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDP---PSAVGS-------GNAGGSG 111
PPG P + H L + P ++ K P GS G G SG
Sbjct: 1394 PPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPGASG 1453
Query: 112 PRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGKKVR 160
P G G G G A GG + G G G+ ++
Sbjct: 1454 PIGPGGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPPGEVIQ 1502
Score = 36.2 bits (82), Expect = 0.20
Identities = 38/138 (27%), Positives = 52/138 (37%), Gaps = 14/138 (10%)
Query: 32 GAGGAD-----AAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSP--PQGSPQDQHHFLR 84
G+GG D AA+E+ ++ R GPP P G P P GSP +
Sbjct: 457 GSGGGDKGPVVAAQEAQAQAILQQA-RLALRGPPGPMGYTGRPGPLGQPGSPGLKGE--S 513
Query: 85 SSVRPQSKRPRK---DPPSAVG-SGNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSR 140
+ PQ R + PP G G AG G RG + G G+ G R
Sbjct: 514 GDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHR 573
Query: 141 SSSRNLGSSGGEKEEGKK 158
+ G G E+G++
Sbjct: 574 GDTGAQGLPGPPGEDGER 591
Score = 35.4 bits (80), Expect = 0.35
Identities = 48/161 (29%), Positives = 58/161 (36%), Gaps = 25/161 (15%)
Query: 8 GGSGEDGLKKLGKRAADEESLEGE-GAGGADAAEESSGTKRD--EKTPRA--GADGPPA- 61
G G DGL L E+ G+ GA G G + D E PR G GP
Sbjct: 556 GDRGFDGLPGL----PGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGL 611
Query: 62 --PPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGS-GNAGGSGPRG---- 114
P G P P PP D + S+ PQ + PP G+ G G GP+G
Sbjct: 612 LGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGE---PGPPGQQGTPGTQGLPGPQGAIGP 668
Query: 115 ---KGAEGGGSSSGNVSGVAPAAPAG--GSRSSSRNLGSSG 150
KG +G G P G G + N G SG
Sbjct: 669 HGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSG 709
Score = 35.4 bits (80), Expect = 0.35
Identities = 41/150 (27%), Positives = 51/150 (34%), Gaps = 26/150 (17%)
Query: 31 EGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGA--PQAPSPPQGSPQDQHHFLRSSVR 88
+G G+ + G + TP G G P P GA P PQG P + S
Sbjct: 633 QGPKGSLGPQGEPGPPGQQGTP--GTQGLPGPQGAIGPHGEKGPQGKPGLPG--MPGSDG 688
Query: 89 PQSKRPRKDPPSAVGSGNAGGSGPRG----------KGAEG--------GGSSSGNVSGV 130
P ++ PP GN G SGP+G KG +G G G
Sbjct: 689 PPGHPGKEGPPGT--KGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGF 746
Query: 131 APAAPAGGSRSSSRNLGSSGGEKEEGKKVR 160
G R GS G + EG K R
Sbjct: 747 KGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 776
Score = 34.3 bits (77), Expect = 0.78
Identities = 33/113 (29%), Positives = 38/113 (33%), Gaps = 13/113 (11%)
Query: 55 GADGPPAPPGAPQAPSPP--------QGSPQDQHHFLRSSVR-PQSKRPRKDPPSAVGS- 104
GADGP PPG PP GSP Q V+ P+ +R K G
Sbjct: 1192 GADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGE---PGVKGPRGERGEKGESGQPGEP 1248
Query: 105 GNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGK 157
G G GP G G G GG R G G + E G+
Sbjct: 1249 GPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQ 1301
Score = 33.9 bits (76), Expect = 1.0
Identities = 32/115 (27%), Positives = 37/115 (32%), Gaps = 10/115 (8%)
Query: 54 AGADGPPAPPGAPQAPSPP--QGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGS------- 104
AG GP G P P PP QG P P KD P+ +
Sbjct: 933 AGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGL 992
Query: 105 -GNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGKK 158
G AGG G +G G G AA +GG G G G+K
Sbjct: 993 PGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEK 1047
Score = 32.3 bits (72), Expect = 3.0
Identities = 58/217 (26%), Positives = 72/217 (33%), Gaps = 27/217 (12%)
Query: 452 SGQGTARGQVKCPRSGAEGKGVGRPPPAADALQSSGESSPESAPGEGAALSLSSPDAPDR 511
SG+ ARG SG G R P G+ P A G+ A S D P
Sbjct: 822 SGEKGARGL-----SGKSGPRGERGPTGP-----RGQRGPRGATGKSGAKGTSGGDGPHG 871
Query: 512 PPPRHQDTGPCLEKTPAEGRDSPTREPG--ALPCACGQLPDLEDELSLLDPLPRYLKSCQ 569
PP GP G P PG LP GQ ++ + P P
Sbjct: 872 PPGERGLPGP-QGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGP------- 923
Query: 570 DLIVPEQCRCADTRPGSEQ---PPLGGAASPEVLAPVSKEA--ADLAPTGPSPRPGP-GL 623
+V Q +T P E+ P G + KE D P G + GP GL
Sbjct: 924 PGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGL 983
Query: 624 LLDVCTKDL-ADAPAEELQEKGSPAGPPPSQGQPAAR 659
+ L A L+ P+GPP G P R
Sbjct: 984 RGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGER 1020
Score = 31.2 bits (69), Expect = 6.6
Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 12/112 (10%)
Query: 55 GADGPPAPPGAP-------QAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNA 107
G+DG P PPG + +G ++ Q++ + PP + G
Sbjct: 438 GSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLALRGPPGPM--GYT 495
Query: 108 GGSGPRGK-GAEGGGSSSGNVSGVAPAAPAG--GSRSSSRNLGSSGGEKEEG 156
G GP G+ G+ G SG++ P P G G + G +G + G
Sbjct: 496 GRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARG 547
>gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens]
Length = 2382
Score = 46.2 bits (108), Expect = 2e-04
Identities = 70/309 (22%), Positives = 120/309 (38%), Gaps = 44/309 (14%)
Query: 898 SENQSHNVCSFSILSNSSVTGRGSFRPIQSSLTKAALSRPI--------VPKVLPPQAT- 948
+++Q H V S S G+ +P SSLT + S+PI + + PPQ T
Sbjct: 700 AQSQPHGVYPPS----SVAQGQSQGQPSSSSLTGVSSSQPIQHPQQQQGIQQTAPPQQTV 755
Query: 949 --SHLASAIDLAATSAGILSGNPLPALDTEGLSGIS-------PLSSDEVTGAISGQDST 999
S ++ AT+A +S P + + +G P E ++ Q S
Sbjct: 756 QYSLSQTSTSSEATTAQPVSQPQAPQVLPQVSAGKQLPVSQPVPTIQGEPQIPVATQPSV 815
Query: 1000 GTHQDGDTLPTVGGSDPFVSIPSRP-EQEPVADSFQGSSVLSLSELPKAPLQNGLSIPLS 1058
G VG P +P P Q P++ ++ S LP + G++ PL
Sbjct: 816 VPVHSGAHFLPVGQPLPTPLLPQYPVSQIPISTPHVSTAQTGFSSLP-ITMAAGITQPLL 874
Query: 1059 SSESSSTRLSPPDVSALLDISLPGPPEDALSQGEPATHISDSIIEIAISSGQYGEGVPLS 1118
+ SS+T + P VS ++ LP + +P T + + + G+P
Sbjct: 875 TLASSATTAAIPGVSTVVPSQLP-------TLLQPVTQLPSQVHPQLLQPAVQSMGIP-- 925
Query: 1119 PAKLNGSDSSKSLPSPSSSPQPHWIASPTHDPQWYPSDSTDSSLSS-----LFASFISPE 1173
++ ++ P SS + P P YP DS + S+ + ++ +SP
Sbjct: 926 ------ANLGQAAEVPLSSGDVLYQGFPPRLPPQYPGDSNIAPSSNVASVCIHSTVLSPP 979
Query: 1174 KSRKMLPTP 1182
++L TP
Sbjct: 980 MPTEVLATP 988
Score = 32.3 bits (72), Expect = 3.0
Identities = 34/146 (23%), Positives = 52/146 (35%), Gaps = 11/146 (7%)
Query: 59 PPAPPGAPQAPSP---PQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGK 115
P P PQ P PQ +P + H + + + + PP+A G +GP
Sbjct: 96 PGLPLSLPQPSIPAAVPQSAPPEPHRE-ETVTATATSQVAQQPPAAAAPGEQAVAGPAPS 154
Query: 116 GAEGGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGKKVRRQWESWSTEDKNTFF 175
S VS P+ GS GG +E ++ R Q + E+ T
Sbjct: 155 TVPSSTSKDRPVS--QPSLVGSKEEPPPARSGSGGGSAKEPQEERSQQQD-DIEELETKA 211
Query: 176 EGLYEHGK----DFEAIQNNIALKYK 197
G+ G+ D E + + YK
Sbjct: 212 VGMSNDGRFLKFDIEIGRGSFKTVYK 237
>gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo
sapiens]
Length = 834
Score = 46.2 bits (108), Expect = 2e-04
Identities = 99/463 (21%), Positives = 160/463 (34%), Gaps = 40/463 (8%)
Query: 736 LISTEVNPKLALEANTISTASVRPAQEEQSMTPPGKVVTVSSRSPRCPRNQASLRSSKTF 795
L++ NP L + S+ P E G T + P+ P L S++
Sbjct: 173 LLAPSTNPLLESLKKMQTPPSLPPCPESA-----GAATTEALSPPKTPNLLPPLGLSQSG 227
Query: 796 PPSSAPCSSGLRNPPRPL--LVPGPSSTGSNDSDG-GLFAVPTTLPPNSRHGKLFSPSKE 852
PP P S NPP L L+P PS + D+ TT P + SP+ +
Sbjct: 228 PPGLLPSPSFDSNPPTTLLGLIPAPSMVPATDTKAPPTLQAETTTKPQATSAP--SPAPK 285
Query: 853 AELTFRQHLNSISMQSDFFLPKPRKLRNRHLRKPLVVQRTLLPRPSENQSHNVCSFSILS 912
F S S + + P ++ P + S S S L
Sbjct: 286 QSFLFGTQNTSPSSPAAPAASSASPMFKPIFTAPPKSEKEGPTPPGPSVSATAPSSSSLP 345
Query: 913 NSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPPQATSHLASAIDLAATSAGILSGNPLPA 972
++ T +F+P+ SS+ A S P+ P Q T+ + A G+ S A
Sbjct: 346 TTTSTTAPTFQPVFSSMGPPA-SVPL-PAPFFKQTTTPATAPTTTAPLFTGLASATSAVA 403
Query: 973 LDTEGLSGISPLSSDEVTGAISGQDSTGTHQDGDTLPTVGGSDPFVSIPSRPEQEPVADS 1032
T S I+ S+ T S PF+ P+ + +
Sbjct: 404 PITSASPSTDSASKPAFGFGINSVSSSSVSTTTST--ATAASQPFLF--GAPQASAASFT 459
Query: 1033 FQGSSVLSLSELPKAPLQNGLSIPLSSSESSSTRLSPPDVSALLDISLPGPPEDALSQGE 1092
S+ + P P ++ + S+S T + S+ D S G L+
Sbjct: 460 PAMGSIFQFGKPPALPTTTTVT---TFSQSLPTAVPTATSSSAADFSGFG---STLATSA 513
Query: 1093 PATHISDSIIEIAISSGQYGEGVPLSPAKLNGSDSSKSLPS-PSSSPQPHW--------- 1142
PAT ++ S+ + +P GS + LPS P ++PQP +
Sbjct: 514 PATSSQPTLTFSNTSTPTF--NIPF------GSSAKSPLPSYPGANPQPAFGAAEGQPPG 565
Query: 1143 IASPTHDPQWYPSDSTDSSLSSLFASFISPEKSRKMLPTPIGT 1185
A P P + S + +S + A +P K++P + T
Sbjct: 566 AAKPALTPSFGSSFTFGNSAAPAAAPTPAPPSMIKIVPAHVPT 608
>gi|29725624 collagen, type XXIII, alpha 1 [Homo sapiens]
Length = 540
Score = 46.2 bits (108), Expect = 2e-04
Identities = 40/133 (30%), Positives = 54/133 (40%), Gaps = 13/133 (9%)
Query: 32 GAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQS 91
G G A G + D+ + GA GPP PPG P A PP + +D R + P
Sbjct: 160 GPKGEKGAPGDFGPRGDQG--QDGAAGPPGPPGPPGARGPPGDTGKDGP---RGAQGPAG 214
Query: 92 KRPRKDPPSAVGSGNAGGSGPRGK-GAEGGGSSSGNVSGVAPAAPAG-----GSRSSSRN 145
P+ +P G G GP+G+ G G G S P P G G R +
Sbjct: 215 --PKGEPGQDGEMGPKGPPGPKGEPGVPGKKGDDGTPSQPGPPGPKGEPGSMGPRGENGV 272
Query: 146 LGSSGGEKEEGKK 158
G+ G + E G +
Sbjct: 273 DGAPGPKGEPGHR 285
Score = 32.7 bits (73), Expect = 2.3
Identities = 45/160 (28%), Positives = 57/160 (35%), Gaps = 18/160 (11%)
Query: 8 GGSGEDGLKKLGKRAADEESLEG-EGAGG--ADAAEESSGTKRDEKTPRAGADGPPAPPG 64
G GE G L K A E L G GA G + E +S + ++ GPP PPG
Sbjct: 360 GDPGEPGPAGL-KGEAGEMGLSGLPGADGLKGEKGESASDSLQESLAQLIVEPGPPGPPG 418
Query: 65 AP-----QAPSPPQGSPQDQHHFLRSSVRPQSKRPRK-DPPSAVGSGNAGGSGPRGKGAE 118
P Q P+G + S R S P PP +G G G +G+ E
Sbjct: 419 PPGPMGLQGIQGPKGLDGAKGEKGASGERGPSGLPGPVGPPGLIGL--PGTKGEKGRPGE 476
Query: 119 GGGSSSGNVSGVAPAAPAGGSRSSSRNLGSSGGEKEEGKK 158
G + G G RS G G +G K
Sbjct: 477 PG------LDGFPGPRGEKGDRSERGEKGERGVPGRKGVK 510
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 46.2 bits (108), Expect = 2e-04
Identities = 34/102 (33%), Positives = 41/102 (40%), Gaps = 10/102 (9%)
Query: 51 TPRAG--ADGPPAPPGAPQAPSP-----PQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVG 103
+P+ G GPP PPG PQ P P PQG P +S+ PR P G
Sbjct: 40 SPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQG 99
Query: 104 SGNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRSSSRN 145
GG P+G A+GG S S P P G + N
Sbjct: 100 PPPQGGK-PQGPPAQGGSKSQSARS--PPGKPQGPPQQEGNN 138
Score = 39.7 bits (91), Expect = 0.019
Identities = 33/100 (33%), Positives = 41/100 (41%), Gaps = 23/100 (23%)
Query: 52 PRAGADGP--PAPPGAPQAPSP----------PQGSPQDQHHFLRSSVRPQSKRPRKDPP 99
P G + P P PPG PQ P P P G PQ PQ +P + PP
Sbjct: 61 PPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQ--------GPPPQGGKP-QGPP 111
Query: 100 SAVGSGNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGS 139
+ GS + P GK +G GN + P PAGG+
Sbjct: 112 AQGGSKSQSARSPPGK-PQGPPQQEGN-NPQGPPPPAGGN 149
Score = 34.7 bits (78), Expect = 0.60
Identities = 27/95 (28%), Positives = 35/95 (36%), Gaps = 8/95 (8%)
Query: 47 RDEKTPRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGN 106
R ++P GPP G PQ P P QG + Q S R +P + PP G+
Sbjct: 88 RSPRSPPGKPQGPPPQGGKPQGP-PAQGGSKSQ------SARSPPGKP-QGPPQQEGNNP 139
Query: 107 AGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSRS 141
G P G + + P P GG S
Sbjct: 140 QGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPS 174
Score = 30.8 bits (68), Expect = 8.6
Identities = 25/89 (28%), Positives = 31/89 (34%), Gaps = 21/89 (23%)
Query: 584 PGSEQ-PPLGGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTKDLADAPAEELQE 642
PG Q PP G P+ P K P GP P+ D
Sbjct: 54 PGKPQGPPPQGGNKPQGPPPPGK------PQGPPPQ--------------GDKSRSPRSP 93
Query: 643 KGSPAGPPPSQGQPAARPPKEVPASRLAQ 671
G P GPPP G+P P + S+ A+
Sbjct: 94 PGKPQGPPPQGGKPQGPPAQGGSKSQSAR 122
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.130 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,852,327
Number of Sequences: 37866
Number of extensions: 3906671
Number of successful extensions: 37107
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 1414
Number of HSP's that attempted gapping in prelim test: 22186
Number of HSP's gapped (non-prelim): 12444
length of query: 1269
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1155
effective length of database: 13,930,794
effective search space: 16090067070
effective search space used: 16090067070
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.