Guide to the Human Genome
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Name: CRAMP1L Sequence: fasta or formatted (1269aa) NCBI GI: 223972612
Description:

Crm, cramped-like

Referenced in:

Stem Cells and Early Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         97           2
 C cysteine            1.7         21           1
 D aspartate           5.0         63           2
 E glutamate           6.1         77           2
 F phenylalanine       2.0         25           2
 G glycine             9.0        114           5
 H histidine           1.9         24           2
 I isoleucine          3.0         38           2
 K lysine              5.5         70           3
 L leucine            10.1        128           3
 M methionine          1.0         13           2
 N asparagine          2.7         34           2
 P proline            10.6        135           3
 Q glutamine           4.7         60           2
 R arginine            5.8         74           2
 S serine             12.7        161           3
 T threonine           4.2         53           2
 V valine              4.6         58           2
 W tryptophan          0.8         10           1
 Y tyrosine            1.1         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Crm, cramped-like 
NACA                  0.014   nascent polypeptide-associated complex alpha subuni...
SRRM2                 0.012   splicing coactivator subunit SRm300 
MBD6                  0.012   methyl-CpG binding domain protein 6 
MLL2                  0.012   myeloid/lymphoid or mixed-lineage leukemia 2 
MUC4                  0.011   mucin 4 isoform a 
MUC17                 0.010   mucin 17 
FLJ22184              0.010   PREDICTED: hypothetical protein LOC80164 
TAF4                  0.010   TBP-associated factor 4 
LOC100134663          0.010   PREDICTED: hypothetical protein, partial 
COL6A6                0.009   collagen type VI alpha 6 
KIAA1522              0.009   hypothetical protein LOC57648 
COL11A1               0.009   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.009   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.009   alpha 1 type XI collagen isoform A preproprotein [Ho...
COL1A2                0.009   alpha 2 type I collagen 
CKAP4                 0.009   cytoskeleton-associated protein 4 
COL1A1                0.009   alpha 1 type I collagen preproprotein 
PRB1                  0.009   proline-rich protein BstNI subfamily 1 isoform 2 pre...
UBN2                  0.009   ubinuclein 2 
MAGEC1                0.009   melanoma antigen family C, 1 
PRB2                  0.009   proline-rich protein BstNI subfamily 2 
VASP                  0.009   vasodilator-stimulated phosphoprotein 
COL11A2               0.009   collagen, type XI, alpha 2 isoform 2 preproprotein ...
COL11A2               0.009   collagen, type XI, alpha 2 isoform 3 preproprotein ...
COL11A2               0.009   collagen, type XI, alpha 2 isoform 1 preproprotein ...
WNK1                  0.008   WNK lysine deficient protein kinase 1 
LOC100288540          0.008   PREDICTED: hypothetical protein XP_002342775 
COL23A1               0.008   collagen, type XXIII, alpha 1 
PRB1                  0.008   proline-rich protein BstNI subfamily 1 isoform 3 pre...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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