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Search of human proteins with 223671856
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|223671856 coiled-coil domain containing 85C [Homo sapiens]
(419 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|223671856 coiled-coil domain containing 85C [Homo sapiens] 841 0.0
gi|122937261 coiled-coil domain containing 85A [Homo sapiens] 254 8e-68
gi|46094079 hepatitis delta antigen-interacting protein A [Homo ... 180 2e-45
gi|109148552 keratin 3 [Homo sapiens] 48 2e-05
gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens] 48 2e-05
gi|195972866 keratin 10 [Homo sapiens] 47 2e-05
gi|148922920 DENN/MADD domain containing 4B [Homo sapiens] 47 2e-05
gi|47132620 keratin 2 [Homo sapiens] 46 6e-05
gi|122937424 one cut homeobox 3 [Homo sapiens] 46 6e-05
gi|119395750 keratin 1 [Homo sapiens] 45 1e-04
gi|42519916 forkhead box O3A [Homo sapiens] 45 2e-04
gi|4503739 forkhead box O3A [Homo sapiens] 45 2e-04
gi|54607124 RNA binding motif protein 15B [Homo sapiens] 44 3e-04
gi|153791670 keratin 76 [Homo sapiens] 44 4e-04
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 44 4e-04
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 44 4e-04
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 44 4e-04
gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens] 44 4e-04
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 44 4e-04
gi|22758136 MAP7 domain containing 2 [Homo sapiens] 44 4e-04
gi|33620755 YEATS domain containing 2 [Homo sapiens] 43 5e-04
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 43 5e-04
gi|12707580 paired-like homeobox 2b [Homo sapiens] 43 6e-04
gi|7706435 headcase [Homo sapiens] 43 6e-04
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 43 6e-04
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 43 6e-04
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 43 6e-04
gi|89357932 keratin 5b [Homo sapiens] 42 0.001
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 42 0.001
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 42 0.001
>gi|223671856 coiled-coil domain containing 85C [Homo sapiens]
Length = 419
Score = 841 bits (2173), Expect = 0.0
Identities = 419/419 (100%), Positives = 419/419 (100%)
Query: 1 MAKPAATAAAASEELSQVPDEELLRWSKEELARRLRRAEGEKVGLMLEHGGLMRDVNRRL 60
MAKPAATAAAASEELSQVPDEELLRWSKEELARRLRRAEGEKVGLMLEHGGLMRDVNRRL
Sbjct: 1 MAKPAATAAAASEELSQVPDEELLRWSKEELARRLRRAEGEKVGLMLEHGGLMRDVNRRL 60
Query: 61 QQHLLEIRGLKDVNQRLQDDNQELRELCCFLDDDRQKGRKLAREWQRFGRHAAGAVWHEV 120
QQHLLEIRGLKDVNQRLQDDNQELRELCCFLDDDRQKGRKLAREWQRFGRHAAGAVWHEV
Sbjct: 61 QQHLLEIRGLKDVNQRLQDDNQELRELCCFLDDDRQKGRKLAREWQRFGRHAAGAVWHEV 120
Query: 121 ARSQQKLRELEARQEALLRENLELKELVLLLDEERAALAATGAASGGGGGGGGAGSRSSI 180
ARSQQKLRELEARQEALLRENLELKELVLLLDEERAALAATGAASGGGGGGGGAGSRSSI
Sbjct: 121 ARSQQKLRELEARQEALLRENLELKELVLLLDEERAALAATGAASGGGGGGGGAGSRSSI 180
Query: 181 DSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGSPDHHHHVPPPLLPPGPHKAPDGKA 240
DSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGSPDHHHHVPPPLLPPGPHKAPDGKA
Sbjct: 181 DSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGSPDHHHHVPPPLLPPGPHKAPDGKA 240
Query: 241 GATRRSLDDLSAPPHHRSIPNGLHDPSSTYIRQLESKVRLLEGDKLLAQQAGSGEFRTLR 300
GATRRSLDDLSAPPHHRSIPNGLHDPSSTYIRQLESKVRLLEGDKLLAQQAGSGEFRTLR
Sbjct: 241 GATRRSLDDLSAPPHHRSIPNGLHDPSSTYIRQLESKVRLLEGDKLLAQQAGSGEFRTLR 300
Query: 301 KGFSPYHSESQLASLPPSYQDSLQNGPACPAPELPSPPSAGYSPAGQKPEAVVHAMKVLE 360
KGFSPYHSESQLASLPPSYQDSLQNGPACPAPELPSPPSAGYSPAGQKPEAVVHAMKVLE
Sbjct: 301 KGFSPYHSESQLASLPPSYQDSLQNGPACPAPELPSPPSAGYSPAGQKPEAVVHAMKVLE 360
Query: 361 VHENLDRQLQDSCEEDLSEKEKAIVREMCNVVWRKLGDAASSKPSIRQHLSGNQFKGPL 419
VHENLDRQLQDSCEEDLSEKEKAIVREMCNVVWRKLGDAASSKPSIRQHLSGNQFKGPL
Sbjct: 361 VHENLDRQLQDSCEEDLSEKEKAIVREMCNVVWRKLGDAASSKPSIRQHLSGNQFKGPL 419
>gi|122937261 coiled-coil domain containing 85A [Homo sapiens]
Length = 553
Score = 254 bits (650), Expect = 8e-68
Identities = 146/266 (54%), Positives = 175/266 (65%), Gaps = 22/266 (8%)
Query: 4 PAATAAAAS---EELSQVPDEELLRWSKEELARRLRRAEGEKVGLMLEHGGLMRDVNRRL 60
PA ++AA E+LS+V DEELL+WSKEEL R LRRAE EKV ML+H L+R+VNRRL
Sbjct: 22 PAGSSAAPPAPVEDLSKVSDEELLQWSKEELIRSLRRAEAEKVSAMLDHSNLIREVNRRL 81
Query: 61 QQHLLEIRGLKDVNQRLQDDNQELRELCCFLDDDRQKGRKLAREWQRFGRHAAGAVWHEV 120
Q HL EIRGLKD+NQ+LQ+DNQELR+LCCFLDDDRQKG++++REWQR GR+ AG + EV
Sbjct: 82 QLHLGEIRGLKDINQKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEV 141
Query: 121 ARSQQKLRELEARQEALLRENLELKELVLLLDEERAALAATGAASGGGGGGGGAGSRSSI 180
A QKL++LE +QE +++EN+ELKEL +LLDEE+ G G AGSR SI
Sbjct: 142 ALYLQKLKDLEVKQEEVVKENMELKELCVLLDEEK--------------GAGCAGSRCSI 187
Query: 181 DSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGSPDHHHHVPPPLLPPGPHKAPDGKA 240
DSQASL + AP RDVGDGSSTSS GS SPDHH H P H
Sbjct: 188 DSQASLCQLTASTAP--YVRDVGDGSSTSSTGSTDSPDHHKHHASSGSP--EHLQKPRSE 243
Query: 241 GATRRSLDDLSAPPHHRSIPNGLHDP 266
G+ S SA P H P P
Sbjct: 244 GSPEHS-KHRSASPEHPQKPRACGTP 268
Score = 87.0 bits (214), Expect = 3e-17
Identities = 69/229 (30%), Positives = 99/229 (43%), Gaps = 65/229 (28%)
Query: 214 GGSPDHHHHVPPPLLPPGPHKAPDGKAGATR----RSLDDLSAPPHHRSIPNGLHDPSST 269
GGSPDH H G G G +R R PHHR++ +G+++ + +
Sbjct: 367 GGSPDHKHG--------GGSGGSGGSGGGSREGTLRRQAQEDGSPHHRNVYSGMNESTLS 418
Query: 270 YIRQLESKVRLLEGDKLLAQQAGSGEFR-------TLRKGFSPYHSESQ----------- 311
Y+RQLE++VR LE + + QA + + KG+
Sbjct: 419 YVRQLEARVRQLEEENRMLPQASQNRRQPPTRNSSNMEKGWGSRARRVLQWWQGCRGIGR 478
Query: 312 -LASLPPSYQDSLQNGPACPAPELPSPPSAGYSPAGQKPEAVVHAMKVLEVHENLDRQLQ 370
L +LP S++ S + +P + S G++ Q+PE VVH++KV
Sbjct: 479 CLPTLPGSFRLSSGADGSNSSPNSAASFS-GHATPSQQPEPVVHSLKV------------ 525
Query: 371 DSCEEDLSEKEKAIVREMCNVVWRKLGDAASSKPSIRQHLSGNQFKGPL 419
VWRKLGDAA S P IRQHLSGNQ+KGP+
Sbjct: 526 ---------------------VWRKLGDAAGSCPGIRQHLSGNQYKGPM 553
>gi|46094079 hepatitis delta antigen-interacting protein A [Homo
sapiens]
Length = 202
Score = 180 bits (457), Expect = 2e-45
Identities = 102/204 (50%), Positives = 128/204 (62%), Gaps = 19/204 (9%)
Query: 15 LSQVPDEELLRWSKEELARRLRRAEGEKVGLMLEHGGLMRDVNRRLQQHLLEIRGLKDVN 74
L ++ DEE+ KEEL RRLRR E ++ +++ G LM++VNR+LQ HL EIR LK +N
Sbjct: 8 LEELTDEEMAALGKEELVRRLRREEAARLAALVQRGRLMQEVNRQLQGHLGEIRELKQLN 67
Query: 75 QRLQDDNQELRELCCFLDDDRQKGRKLAREWQRFGRHAAGAVWHEVARSQQKLRELEARQ 134
+RLQ +N+ELR+LCCFLD +RQ+GR+ AR+WQ FG A+ AV ++ QKL ELE RQ
Sbjct: 68 RRLQAENRELRDLCCFLDSERQRGRRAARQWQLFGTQASRAVREDLGGCWQKLAELEGRQ 127
Query: 135 EALLRENLELKELVLLLDEERAALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGA 194
E LLRENL LKEL L L EE G SG GG G G ++
Sbjct: 128 EELLRENLALKELCLALGEE---WGPRGGPSGAGGSGAGPAPELAL-------------- 170
Query: 195 PGAGARDVGDGSSTSSAGSGGSPD 218
P G RD+GDGS SS GS GSPD
Sbjct: 171 PPCGPRDLGDGS--SSTGSVGSPD 192
>gi|109148552 keratin 3 [Homo sapiens]
Length = 628
Score = 47.8 bits (112), Expect = 2e-05
Identities = 55/219 (25%), Positives = 86/219 (39%), Gaps = 33/219 (15%)
Query: 21 EELLRWSKEELARRLRRAEGEKVGLMLEHGGLMR-------DVNRRLQQHLLEIRGLKDV 73
E++ + SK E + GE HG +R ++NR +Q+ EI G+K
Sbjct: 379 EDIAQRSKAEAEALYQTKLGELQTTAGRHGDDLRNTKSEIIELNRMIQRLRAEIEGVKKQ 438
Query: 74 NQRLQ---------------DDNQELRELCCFLDDDRQKGRKLAREWQRFGRHAAGAVWH 118
N LQ D N +L+EL L + +L R++Q + A+
Sbjct: 439 NANLQTAIAEAEQHGEMALKDANAKLQELQAALQQAKDDLARLLRDYQEL-MNVKLALDV 497
Query: 119 EVARSQQKLRELEARQEALLRENLELKELVLLLDEERAALAATGAASGGGGGGGGAGSRS 178
E+A ++ L E R + + + + + T A++GG GGG G G
Sbjct: 498 EIATYRKLLEGEEYRMSGECPSAVSISVV---------SSSTTSASAGGYGGGYGGGMGG 548
Query: 179 SIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAG-SGGS 216
+ S G G G +G G S+G SGGS
Sbjct: 549 GLGGGFSAGGGSGSGFGRGGGGGIGGGFGGGSSGFSGGS 587
Score = 31.6 bits (70), Expect = 1.4
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 156 AALAATGAASGGG----GGGGGAGSRS--SIDSQASLSGPLSGGAPGAGARDVGDGSSTS 209
+ +A +G A GG G GG GSRS ++ S+S ++ G AG G S
Sbjct: 30 SCVAHSGGAGGGAYGFRSGAGGFGSRSLYNLGGNKSISISVAAGGSRAGGFGGGRSSCAF 89
Query: 210 SAGSGG 215
+ G GG
Sbjct: 90 AGGYGG 95
Score = 29.3 bits (64), Expect = 7.0
Identities = 17/54 (31%), Positives = 17/54 (31%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
G GG G GGG G G G PG G G S GG
Sbjct: 107 GGFGGGRGMGGGFGGAGGFGGAGGFGGAGGFGGPGGFGGSGGFGGPGSLGSPGG 160
Score = 28.9 bits (63), Expect = 9.1
Identities = 21/54 (38%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
G+ GGG GGG G R G GGA G G G G GSGG
Sbjct: 98 GSGYGGGFGGGFGGGRGMGGGFGGAGG--FGGAGGFGGAG-GFGGPGGFGGSGG 148
>gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens]
Length = 430
Score = 47.8 bits (112), Expect = 2e-05
Identities = 42/131 (32%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 151 LDEERAALAATGAASGGGGGGGGAGSRS--SIDSQASLSGPLSGGA---PGAGARDVGDG 205
L + A A GGGGGG+ S S+ P SG + PG G VG
Sbjct: 81 LSAQPAGSPRASLAGSDGGGGGGSARSSGISLGYDQRHGSPRSGRSDPRPGPGPPSVGSA 140
Query: 206 -SSTSSAGSGGSPDHHHHVPPPLLPPGPHKAPDGKAGATRRSLDDLSAPPHHRSIPNGLH 264
SS SS GS GS + PP P P ++P+ AG L L PP P+
Sbjct: 141 RSSVSSLGSRGSAGAYADFLPPGACPAPARSPE-PAGPAPFPLPALPLPPGREGGPSAAE 199
Query: 265 DPSSTYIRQLE 275
R+LE
Sbjct: 200 RRLEALTRELE 210
Score = 30.8 bits (68), Expect = 2.4
Identities = 32/112 (28%), Positives = 39/112 (34%), Gaps = 16/112 (14%)
Query: 152 DEERAALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPG------AGARDVGDG 205
DE AL G SGG G SR + + LS G AG+ G G
Sbjct: 43 DEAAPALGRRGKGSGGPEAGADGLSRGERGPRRAAVPELSAQPAGSPRASLAGSDGGGGG 102
Query: 206 SSTSSAGSGGSPDHHHHVP-----PPLLPPGPHKAPDGKAGATRRSLDDLSA 252
S S+G D H P P PGP G+ R S+ L +
Sbjct: 103 GSARSSGISLGYDQRHGSPRSGRSDPRPGPGP-----PSVGSARSSVSSLGS 149
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 47.4 bits (111), Expect = 2e-05
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 18/116 (15%)
Query: 119 EVARSQQKLRELEARQEALLRENLELKELVLLLDEE----RAALAATGAASGGG------ 168
+++ +++L+++ A E E +L ++ + L+ E R+ L G++ GGG
Sbjct: 410 QISALEEQLQQIRAETECQNTEYQQLLDIKIRLENEIQTYRSLLEGEGSSGGGGRGGGSF 469
Query: 169 GGGGGAGSRSSIDS--------QASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGS 216
GGG G GS S S G GG+ G G+ G G +SS G GGS
Sbjct: 470 GGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGS 525
Score = 45.1 bits (105), Expect = 1e-04
Identities = 25/55 (45%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQ-ASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
G +SGGG GGG G SS S SG GG+ G G G GSS + SGG
Sbjct: 501 GGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGG 555
Score = 43.9 bits (102), Expect = 3e-04
Identities = 24/55 (43%), Positives = 27/55 (49%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGS 216
G +SGGG GGG GS S G SGG G G+ G G S+S GGS
Sbjct: 480 GGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGS 534
Score = 39.7 bits (91), Expect = 0.005
Identities = 21/60 (35%), Positives = 25/60 (41%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGSPDHHH 221
G++ GG GGG +G S G GG G G G GSS+ GGS H
Sbjct: 507 GSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGH 566
Score = 37.7 bits (86), Expect = 0.020
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Query: 161 TGAASGGGGGGGGAGSRSSIDSQ--ASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
+ + SGGGGGGGG G + S +S G L GG G G S S SGG
Sbjct: 12 SSSRSGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGF----SGGSFSRGSSGG 64
Score = 36.6 bits (83), Expect = 0.044
Identities = 20/54 (37%), Positives = 22/54 (40%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
G GG GGGGG S S+ SL G S G G+ G GS G
Sbjct: 19 GGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSG 72
Score = 36.6 bits (83), Expect = 0.044
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTS-SAGSGGS 216
G++SGG GGG G +S G SGG G G+ G SS+S S G S
Sbjct: 524 GSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESSS 579
Score = 33.1 bits (74), Expect = 0.48
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 159 AATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
+++G GG GGGG G S SG GG +G G +SS+GS G
Sbjct: 525 SSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSG------GHKSSSSGSVG 575
Score = 32.7 bits (73), Expect = 0.63
Identities = 17/53 (32%), Positives = 21/53 (39%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSG 214
G G GGGGG S +S G GG+ G + GS S+ G
Sbjct: 529 GYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSKG 581
Score = 29.6 bits (65), Expect = 5.3
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 166 GGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
GG GGG GS S S G GG+ G G+ G S G GG
Sbjct: 78 GGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGS---FGGGSFGGGGFGG 124
>gi|148922920 DENN/MADD domain containing 4B [Homo sapiens]
Length = 1496
Score = 47.4 bits (111), Expect = 2e-05
Identities = 67/238 (28%), Positives = 86/238 (36%), Gaps = 52/238 (21%)
Query: 152 DEERAALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSA 211
D + L+ TG GG GG+GS S S +L G LSG P AG R D + T
Sbjct: 999 DGSLSDLSLTGEEPLPGGSPGGSGSALSAQSTEALEG-LSGRGPKAGGRQ--DEAGTPRR 1055
Query: 212 GSGG------SPDHH---HHVPPPLLPPGPHKAPDGKAGATRRSLDDLSAPPHHRSIPNG 262
G G +P H +PPP LP PD A R +D L H R P
Sbjct: 1056 GLGARLQQLLTPSRHSPASRIPPPELP------PDLPPPARRSPMDSLL---HPRERPGS 1106
Query: 263 LHDPSSTYI-------RQLESKVRLLEGDKLLAQQAGSGEFRTL----------RKGFSP 305
SS + S + L + L+ GS + +L R S
Sbjct: 1107 TASESSASLGSEWDLSESSLSNLSLRRSSERLSDTPGSFQSPSLEILLSSCSLCRACDSL 1166
Query: 306 YHSESQLASLPPSYQDSLQNGP--ACP------------APELPSPPSAGYSPAGQKP 349
+ E +A P + P ACP P +PSP SAG S + P
Sbjct: 1167 VYDEEIMAGWAPDDSNLNTTCPFCACPFVPLLSVQTLDSRPSVPSPKSAGASGSKDAP 1224
>gi|47132620 keratin 2 [Homo sapiens]
Length = 639
Score = 46.2 bits (108), Expect = 6e-05
Identities = 60/239 (25%), Positives = 97/239 (40%), Gaps = 46/239 (19%)
Query: 21 EELLRWSKEELARRLRRAEGEKVGLML-EHGGLMRDVN----------RRLQQHLLEIR- 68
EE+ + SKEE A L ++ E++ + + HG ++++ +RLQ + ++
Sbjct: 357 EEIAQRSKEE-AEALYHSKYEELQVTVGRHGDSLKEIKIEISELNRVIQRLQGEIAHVKK 415
Query: 69 -------GLKDVNQR----LQDDNQELRELCCFLDDDRQKGRKLAREWQRFGRHAAGAVW 117
+ D QR L+D +L +L L ++ +L R++Q + A+
Sbjct: 416 QCKNVQDAIADAEQRGEHALKDARNKLNDLEEALQQAKEDLARLLRDYQEL-MNVKLALD 474
Query: 118 HEVARSQQKLRELEARQEALLRENLELKELVLLLDEERAALAATGAASGGG---GGG--- 171
E+A ++ L E R L N+ + + A+ AA G + G G GGG
Sbjct: 475 VEIATYRKLLEGEECRMSGDLSSNVTVSVTSSTISSNVASKAAFGGSGGRGSSSGGGYSS 534
Query: 172 ---------------GGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
GG+G SI SG SGG G+G G S GSGG
Sbjct: 535 GSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGRYGSGGGSKGGSISGGGYGSGG 593
Score = 38.1 bits (87), Expect = 0.015
Identities = 23/54 (42%), Positives = 24/54 (44%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
GAA G GG GGG G SS + SG GG G R G G G GG
Sbjct: 84 GAAGGFGGRGGGFGGGSSFGGGSGFSGGGFGGGGFGGGRFGGFGGPGGVGGLGG 137
Score = 35.8 bits (81), Expect = 0.074
Identities = 24/58 (41%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Query: 166 GGGGGGGGAGSRS--------SIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
GGG GGGG GSRS SI + G G A G G R G G +S G G
Sbjct: 50 GGGFGGGGFGSRSLVGLGGTKSISISVAGGGGGFGAAGGFGGRGGGFGGGSSFGGGSG 107
Score = 33.5 bits (75), Expect = 0.37
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSG 214
G + GGG G G G SS S G SGG G+G G GSS+ SG
Sbjct: 581 GGSISGGGYGSGGGKHSS--GGGSRGGSSSGGGYGSG----GGGSSSVKGSSG 627
Score = 32.7 bits (73), Expect = 0.63
Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Query: 157 ALAATGAASGGGGGG----GGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAG 212
+++ G SGGG GG GG SI SG GG +G G SS G
Sbjct: 557 SISGGGYGSGGGSGGRYGSGGGSKGGSISGGGYGSG---GGKHSSGGGSRGGSSSGGGYG 613
Query: 213 SGG 215
SGG
Sbjct: 614 SGG 616
Score = 30.4 bits (67), Expect = 3.1
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Query: 157 ALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPG--AGARDVGDGSSTSSAGSG 214
A G GG GGG G S G GG G G VG G G
Sbjct: 85 AAGGFGGRGGGFGGGSSFGGGSGFSGGGFGGGGFGGGRFGGFGGPGGVGGLGGPGGFGPG 144
Query: 215 GSPDHHHHV 223
G P H V
Sbjct: 145 GYPGGIHEV 153
>gi|122937424 one cut homeobox 3 [Homo sapiens]
Length = 494
Score = 46.2 bits (108), Expect = 6e-05
Identities = 61/229 (26%), Positives = 79/229 (34%), Gaps = 34/229 (14%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGSPDHHH 221
G GGGGG GGAG S A G L+G A G + + G GG+ +
Sbjct: 56 GGGGGGGGGAGGAGGAGSAGGGADFRGELAGPLHPAM------GMACEAPGLGGT--YTT 107
Query: 222 HVPPPLLPP--------GPHKAPDGKAGATRRSLDDLSAPPHHRSIPNGLHDPSSTYIRQ 273
P LPP H A AGA A PH + P P
Sbjct: 108 LTPLQHLPPLAAVADKFHQHAAAAAVAGAHG---GHPHAHPHPAAAPPP-PPPPQRLAAS 163
Query: 274 LESKVRLLEGDKLLAQQAGSGEFRTLRKGFSPYHSE-----SQLASLPPSYQDSLQNGPA 328
+ L+ ++ A A G + PY E S L+ LP + +L P
Sbjct: 164 VSGSFTLMRDER--AALASVGHL------YGPYGKELPAMGSPLSPLPNALPPALHGAPQ 215
Query: 329 CPAPELPSPPSAGYSPAGQKPEAVVHAMKVLEVHENLDRQLQDSCEEDL 377
P P P PP A Y P G + E H L + +D+ L
Sbjct: 216 PPPPP-PPPPLAAYGPPGHLAGDKLLPPAAFEPHAALLGRAEDALARGL 263
Score = 39.7 bits (91), Expect = 0.005
Identities = 28/68 (41%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 150 LLDEERAALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTS 209
LL ALA GGG G GGAGS S+ A L G + GA G G G
Sbjct: 251 LLGRAEDALARGLPGGGGGTGSGGAGSGSAAGLLAPLGGLAAAGAHGPHGGGGGPG---- 306
Query: 210 SAGSGGSP 217
GSGG P
Sbjct: 307 --GSGGGP 312
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 45.1 bits (105), Expect = 1e-04
Identities = 53/218 (24%), Positives = 87/218 (39%), Gaps = 30/218 (13%)
Query: 21 EELLRWSKEELARRLRRAEGEKVGLML-EHGGLMRDVNRRLQQHLLEIRGLKDVNQRLQD 79
E++ + SK E A L +++ E++ + HG +R+ +EI L V QRL+
Sbjct: 359 EDIAQKSKAE-AESLYQSKYEELQITAGRHGDSVRNSK-------IEISELNRVIQRLRS 410
Query: 80 D----NQELRELCCFLDDDRQKGRKLAREWQRFGRHAAGAVWHEVARSQQKLRELEARQE 135
+ +++ L + D Q+G ++ + A+ + LR+ +
Sbjct: 411 EIDNVKKQISNLQQSISDAEQRGENALKDAKNKLNDLEDALQQAKEDLARLLRDYQELMN 470
Query: 136 ALLRENLELKELVLLLDEERAALAA-----------------TGAASGGGGGGGGAGSRS 178
L +LE+ LL+ E + ++ +G S GGGGGG S
Sbjct: 471 TKLALDLEIATYRTLLEGEESRMSGECAPNVSVSVSTSHTTISGGGSRGGGGGGYGSGGS 530
Query: 179 SIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGS 216
S S G GG G G+ G S S GS GS
Sbjct: 531 SYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGS 568
Score = 39.3 bits (90), Expect = 0.007
Identities = 25/57 (43%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 162 GAASGGGGGGGGAGS-RSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSS--AGSGG 215
G+ GGGGGGG GS S S S G G G G G GSS+ GSGG
Sbjct: 537 GSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGG 593
Score = 39.3 bits (90), Expect = 0.007
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Query: 155 RAALAATGAASGGGGG----GGGAGSRSSIDSQASLSGPLSGGAPG-----AGARDVGDG 205
R + + G++ G GGG GGG G S S +S SG GG+ G +G R G G
Sbjct: 549 RGSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSS-SGGYRGGSGGGGGGSSGGRGSGGG 607
Query: 206 SSTSSAGSGGS 216
SS S G GS
Sbjct: 608 SSGGSIGGRGS 618
Score = 38.5 bits (88), Expect = 0.011
Identities = 27/67 (40%), Positives = 29/67 (43%), Gaps = 12/67 (17%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGA-GARDVGDGSSTSSA--------- 211
G + G GGGGGG GS S S G GG G+ G R G GSS S
Sbjct: 563 GGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGGSIGGRGSSSGG 622
Query: 212 --GSGGS 216
SGGS
Sbjct: 623 VKSSGGS 629
Score = 37.4 bits (85), Expect = 0.026
Identities = 24/54 (44%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
G + G GGGGG G R S S S G GG+ G+G G GS S + SGG
Sbjct: 536 GGSYGSGGGGG--GGRGSYGSGGSSYGS-GGGSYGSGGGGGGHGSYGSGSSSGG 586
Score = 33.1 bits (74), Expect = 0.48
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 163 AASGGGGG----GGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
++ GGGGG GGG GSRS ++ S S +S G G G G GG
Sbjct: 47 SSCGGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFGGGYGGGGFGGGG 103
Score = 32.0 bits (71), Expect = 1.1
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 159 AATGAASGGGGGGGGAGSRSSIDSQASLSGPLSG-GAPGAGARDVGDGSS 207
+++G GG GGGGG S S G + G G+ G + G SS
Sbjct: 582 SSSGGYRGGSGGGGGGSSGGRGSGGGSSGGSIGGRGSSSGGVKSSGGSSS 631
Score = 31.6 bits (70), Expect = 1.4
Identities = 18/51 (35%), Positives = 24/51 (47%)
Query: 161 TGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSA 211
+G++SGG GG G G S + S G G G G+ G SS S+
Sbjct: 580 SGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGGSIGGRGSSSGGVKSSGGSS 630
Score = 29.6 bits (65), Expect = 5.3
Identities = 21/65 (32%), Positives = 22/65 (33%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGSPDHHH 221
G SG GGG GG G G GG G G G G GG +
Sbjct: 85 GRGSGFGGGYGGGGFGGGGFGGGGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGGYGGGYG 144
Query: 222 HVPPP 226
V PP
Sbjct: 145 PVCPP 149
Score = 29.3 bits (64), Expect = 7.0
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 155 RAALAATGAASGGGGGGGGAGSRSSIDSQASLSGPL--SGGA 194
R G S GG G GG S SI + S SG + SGG+
Sbjct: 588 RGGSGGGGGGSSGGRGSGGGSSGGSIGGRGSSSGGVKSSGGS 629
Score = 28.9 bits (63), Expect = 9.1
Identities = 20/56 (35%), Positives = 24/56 (42%)
Query: 161 TGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGS 216
+G SGGG G AG + S S SGG G + G G S + G GS
Sbjct: 9 SGYRSGGGFSSGSAGIINYQRRTTSSSTRRSGGGGGRFSSCGGGGGSFGAGGGFGS 64
>gi|42519916 forkhead box O3A [Homo sapiens]
Length = 673
Score = 44.7 bits (104), Expect = 2e-04
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 10/94 (10%)
Query: 152 DEERAALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSA 211
DE+ A + A GGGGG G GS ++ A + P G +D G G +T++
Sbjct: 66 DEDGGGRAGSAMAIGGGGGSGTLGSGLLLEDSARVLAP--------GGQDPGSGPATAAG 117
Query: 212 GSGGSPDHHHHVPPPLLPPGPHKAPDGKAGATRR 245
G G PL PP P A G +G R+
Sbjct: 118 GLSGGTQALLQPQQPLPPPQPGAA--GGSGQPRK 149
Score = 28.9 bits (63), Expect = 9.1
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 149 LLLDEERAALAATGAASGGG----GGGGGAGSRSSIDSQASLSGPLSGGAPGAG 198
LLL++ LA G G G GG G+++ + Q L P G A G+G
Sbjct: 92 LLLEDSARVLAPGGQDPGSGPATAAGGLSGGTQALLQPQQPLPPPQPGAAGGSG 145
>gi|4503739 forkhead box O3A [Homo sapiens]
Length = 673
Score = 44.7 bits (104), Expect = 2e-04
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 10/94 (10%)
Query: 152 DEERAALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSA 211
DE+ A + A GGGGG G GS ++ A + P G +D G G +T++
Sbjct: 66 DEDGGGRAGSAMAIGGGGGSGTLGSGLLLEDSARVLAP--------GGQDPGSGPATAAG 117
Query: 212 GSGGSPDHHHHVPPPLLPPGPHKAPDGKAGATRR 245
G G PL PP P A G +G R+
Sbjct: 118 GLSGGTQALLQPQQPLPPPQPGAA--GGSGQPRK 149
Score = 28.9 bits (63), Expect = 9.1
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 149 LLLDEERAALAATGAASGGG----GGGGGAGSRSSIDSQASLSGPLSGGAPGAG 198
LLL++ LA G G G GG G+++ + Q L P G A G+G
Sbjct: 92 LLLEDSARVLAPGGQDPGSGPATAAGGLSGGTQALLQPQQPLPPPQPGAAGGSG 145
>gi|54607124 RNA binding motif protein 15B [Homo sapiens]
Length = 890
Score = 43.9 bits (102), Expect = 3e-04
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 155 RAALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSG 214
RA G+ SGGGG G G+ + + + SG SG G G R G ++ G+
Sbjct: 52 RARDKPRGSGSGGGGHRDGRGTGDA--NHRASSGRSSGSGAGGGGR---GGKASGDPGAS 106
Query: 215 GSPDHHHHVPPPLLPPGPHKAPDGKAGA 242
G +PPP PPG A G + A
Sbjct: 107 GMSPRASPLPPPPPPPGAEPACPGSSAA 134
Score = 37.4 bits (85), Expect = 0.026
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 159 AATGAASGGGGGGGGAGSRSSIDSQAS----LSGPLSGGAPGAGARDVGDGSSTSS 210
A++G +SG G GGGG G ++S D AS + PL P GA GSS ++
Sbjct: 80 ASSGRSSGSGAGGGGRGGKASGDPGASGMSPRASPLPPPPPPPGAEPACPGSSAAA 135
>gi|153791670 keratin 76 [Homo sapiens]
Length = 638
Score = 43.5 bits (101), Expect = 4e-04
Identities = 53/221 (23%), Positives = 83/221 (37%), Gaps = 26/221 (11%)
Query: 21 EELLRWSKEELARRLRRAEGEKVGLMLEHGGLMR-------DVNRRLQQHLLEIRGLKDV 73
EE+ + SK E + GE HG +R ++NR +Q+ EI +K
Sbjct: 362 EEIAQRSKSEAEALYQTKLGELQTTAGRHGDDLRNTKSEIMELNRMIQRLRAEIENVKKQ 421
Query: 74 NQRLQ---------------DDNQELRELCCFLDDDRQKGRKLAREWQRFGRHAAGAVWH 118
N LQ D N +L++L L + +L R++Q + A+
Sbjct: 422 NANLQTAIAEAEQRGEMALKDANAKLQDLQTALQKAKDDLARLLRDYQEL-MNVKLALDV 480
Query: 119 EVARSQQKLRELEARQEALLRENL---ELKELVLLLDEERAALAATGAASGGGGGGGGAG 175
E+A ++ L E R + + + + ++ G SG G GG G
Sbjct: 481 EIATYRKLLEGEECRMSGECQSAVCISVVSNVTSTSGSSGSSRGVFGGVSGSGSGGYKGG 540
Query: 176 SRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGS 216
S SS S +SG G G + G S+ S S S
Sbjct: 541 SSSSSSSGYGVSGGSGSGYGGVSSGSTGGRGSSGSYQSSSS 581
Score = 30.8 bits (68), Expect = 2.4
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 156 AALAATGAASGGG----GGGGGAGSRS--SIDSQASLSGPLSGGAPGAGARDVGDGSSTS 209
+ +A +G A GG G G GSRS ++ S S+S ++ G+ AG G S
Sbjct: 31 SCVARSGGAGGGACGFRSGAGSFGSRSLYNLGSNKSISISVAAGSSRAGGFGGGRSSCGF 90
Query: 210 SAGSGG 215
+ G GG
Sbjct: 91 AGGYGG 96
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 43.5 bits (101), Expect = 4e-04
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 156 AALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
AA AAT ++GGGGGGGG+G SG GG G G + + +S GSGG
Sbjct: 64 AAAAATVTSTGGGGGGGGSG------GGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGG 117
Score = 39.3 bits (90), Expect = 0.007
Identities = 22/55 (40%), Positives = 28/55 (50%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGS 216
G +SG GGGGGG G S+ + + + SGG G + G SST S GS
Sbjct: 86 GGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGS 140
Score = 37.0 bits (84), Expect = 0.033
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 160 ATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGA------RDVGDGSSTSSAGS 213
++G GGGGGGGG+ ++ + ++ SG GG G + GSS+SS+ S
Sbjct: 88 SSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSS 147
Query: 214 GGS 216
S
Sbjct: 148 SSS 150
Score = 35.8 bits (81), Expect = 0.074
Identities = 63/243 (25%), Positives = 91/243 (37%), Gaps = 42/243 (17%)
Query: 158 LAATGAASGGGGG----GGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGS 213
LAA SGGGGG GGG S + I++ S S + + + SS+S
Sbjct: 108 LAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPL 167
Query: 214 GGSPDHHHHVPPPLLPPGPHKAPDGKAGATRRSLD----DLSAPPHH-----RSIPNGLH 264
G P + P P GA S +L P + + GLH
Sbjct: 168 PGKPVYSTPSPVENTPQNNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLKHLVGGLH 227
Query: 265 DPSSTYIRQLE--------SKVRLLEGDKLLAQQAGSGEFRTL-RKGFSPYHSESQLAS- 314
T +++LE +VR+L G L A Q G + + RK F +++ AS
Sbjct: 228 -TVYTKLKRLEITPVVCNVEQVRILRG--LGAIQPGVNRCKLISRKDFETLYNDCTNASS 284
Query: 315 ---LPPSYQDSL---QNGPACP--APELPSP--------PSAGYSPAGQKPEAVVHAMKV 358
PP S+ +N P P L SP +A + A A+ AMKV
Sbjct: 285 RPGRPPKRTQSVTSPENSHIMPHSVPGLMSPGIIPPTGLTAAAAAAAAATNAAIAEAMKV 344
Query: 359 LEV 361
++
Sbjct: 345 KKI 347
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 43.5 bits (101), Expect = 4e-04
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 156 AALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
AA AAT ++GGGGGGGG+G SG GG G G + + +S GSGG
Sbjct: 64 AAAAATVTSTGGGGGGGGSG------GGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGG 117
Score = 39.3 bits (90), Expect = 0.007
Identities = 22/55 (40%), Positives = 28/55 (50%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGS 216
G +SG GGGGGG G S+ + + + SGG G + G SST S GS
Sbjct: 86 GGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGS 140
Score = 37.0 bits (84), Expect = 0.033
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 160 ATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGA------RDVGDGSSTSSAGS 213
++G GGGGGGGG+ ++ + ++ SG GG G + GSS+SS+ S
Sbjct: 88 SSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSS 147
Query: 214 GGS 216
S
Sbjct: 148 SSS 150
Score = 35.8 bits (81), Expect = 0.074
Identities = 63/243 (25%), Positives = 91/243 (37%), Gaps = 42/243 (17%)
Query: 158 LAATGAASGGGGG----GGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGS 213
LAA SGGGGG GGG S + I++ S S + + + SS+S
Sbjct: 108 LAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPL 167
Query: 214 GGSPDHHHHVPPPLLPPGPHKAPDGKAGATRRSLD----DLSAPPHH-----RSIPNGLH 264
G P + P P GA S +L P + + GLH
Sbjct: 168 PGKPVYSTPSPVENTPQNNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLKHLVGGLH 227
Query: 265 DPSSTYIRQLE--------SKVRLLEGDKLLAQQAGSGEFRTL-RKGFSPYHSESQLAS- 314
T +++LE +VR+L G L A Q G + + RK F +++ AS
Sbjct: 228 -TVYTKLKRLEITPVVCNVEQVRILRG--LGAIQPGVNRCKLISRKDFETLYNDCTNASS 284
Query: 315 ---LPPSYQDSL---QNGPACP--APELPSP--------PSAGYSPAGQKPEAVVHAMKV 358
PP S+ +N P P L SP +A + A A+ AMKV
Sbjct: 285 RPGRPPKRTQSVTSPENSHIMPHSVPGLMSPGIIPPTGLTAAAAAAAAATNAAIAEAMKV 344
Query: 359 LEV 361
++
Sbjct: 345 KKI 347
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 43.5 bits (101), Expect = 4e-04
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 156 AALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
AA AAT ++GGGGGGGG+G SG GG G G + + +S GSGG
Sbjct: 64 AAAAATVTSTGGGGGGGGSG------GGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGG 117
Score = 39.3 bits (90), Expect = 0.007
Identities = 22/55 (40%), Positives = 28/55 (50%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGS 216
G +SG GGGGGG G S+ + + + SGG G + G SST S GS
Sbjct: 86 GGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGS 140
Score = 37.0 bits (84), Expect = 0.033
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 160 ATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGA------RDVGDGSSTSSAGS 213
++G GGGGGGGG+ ++ + ++ SG GG G + GSS+SS+ S
Sbjct: 88 SSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSS 147
Query: 214 GGS 216
S
Sbjct: 148 SSS 150
Score = 35.0 bits (79), Expect = 0.13
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 158 LAATGAASGGGGGG--GGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
LAA SGGGGGG G G SS AS +G S + + + SS+SS+ G
Sbjct: 108 LAAASNGSGGGGGGISAGGGVASSTPINAS-TGSSSSSSSSSSSSSSSSSSSSSSSSCGP 166
Query: 216 SP 217
P
Sbjct: 167 LP 168
>gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens]
Length = 483
Score = 43.5 bits (101), Expect = 4e-04
Identities = 27/74 (36%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 155 RAALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGA--PGAGARDVGDGSSTSSAG 212
RA ++ GGGGGGGG S+ + G S GA G GA G G S G
Sbjct: 16 RARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGGVGASSSGGGPGGSGGG 75
Query: 213 SGGSPDHHHHVPPP 226
G P PPP
Sbjct: 76 GSGGPGAGTSFPPP 89
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 43.5 bits (101), Expect = 4e-04
Identities = 49/167 (29%), Positives = 66/167 (39%), Gaps = 39/167 (23%)
Query: 195 PGAGARD--VGDGSSTSSAGSGG--------------SPDHHHHVPPPLLPPGPHKAPDG 238
PG A V G STSS SG P+ VPPP PP P P G
Sbjct: 561 PGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSKEGPEPPEEVPPPTTPPVPKVEPKG 620
Query: 239 KA-GATRRSLDDLSAPPHHRSIPNGLHDPSSTYIRQLESKVRLLEGDKLLAQQAGSGEFR 297
G TR+ PP GL P Y + L + + + ++LL QQ +++
Sbjct: 621 DGIGPTRQ-------PP-----SQGLGYPK--YQKSLPPRFQRQQQEQLLKQQQ-QHQWQ 665
Query: 298 TLRKGFSPYHSESQLASLPPSYQDSLQNGPACPAPELPSPPSAGYSP 344
++G +P +PPS + G A PAP+ P PP P
Sbjct: 666 QHQQGSAP------PTPVPPSPPQPVTLG-AVPAPQAPPPPPKALYP 705
Score = 31.6 bits (70), Expect = 1.4
Identities = 45/203 (22%), Positives = 65/203 (32%), Gaps = 27/203 (13%)
Query: 172 GGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGSPDHHHHVPPPLLP-P 230
G G R S + P + G G T+ A + P+ P P P P
Sbjct: 354 GAEGHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLP 413
Query: 231 GPHKAPDGKAGATRRSLDDLSAPPHHRSIPNGLHDPSSTYIRQLESKVRLL--------- 281
PH+ P G G D PP P + +Q S++ L
Sbjct: 414 PPHRGPAGNWGPPG-DYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRRE 472
Query: 282 ---------------EGDKLLAQQAGSGEFRTLRKGFSPYHSESQLASLPPSYQDSLQNG 326
E K L ++ G+ + R + +P + S A PP+ L
Sbjct: 473 EEERRMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAP-PPAVPKELPAP 531
Query: 327 PACPAPELPSPPSAGYSPAGQKP 349
PA P P+P + PA P
Sbjct: 532 PAPPPASAPTPETEPEEPAQAPP 554
Score = 29.6 bits (65), Expect = 5.3
Identities = 52/210 (24%), Positives = 70/210 (33%), Gaps = 51/210 (24%)
Query: 160 ATGAASGGGGGGGGA------GSRSSIDSQASLSGPLSGGAPGAGARDVGDGSS------ 207
++G++SGGGGGG G G + S S + S P PG SS
Sbjct: 1407 SSGSSSGGGGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLPPPPPSSSAVFRLD 1466
Query: 208 -----------------TSSAGSGGSPDHHHHVPP--PLLPPGPHKAPDGKAGATRRSLD 248
+S GS +P H P P P GP P + +R
Sbjct: 1467 QVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPGLPQAPQGPSPRPPTRY-EPQRVNS 1525
Query: 249 DLSAPPHHRSIPNGLHDPSSTYIRQLESKVRLLEGDKLLAQQAGSGEFRTLRKGFSPYHS 308
LS+ PH + +R + R AG F R+ P
Sbjct: 1526 GLSSDPH--------FEEPGPMVRGVGGTPR---------DSAGVSPFPPKRRERPPRKP 1568
Query: 309 E-SQLASLPPSYQDS-LQNGPACPAPELPS 336
E Q SLPP + L + P P P+ S
Sbjct: 1569 ELLQEESLPPPHSSGFLGSKPEGPGPQAES 1598
Score = 28.9 bits (63), Expect = 9.1
Identities = 46/191 (24%), Positives = 68/191 (35%), Gaps = 51/191 (26%)
Query: 168 GGGGGGA------------GSRSSIDSQASLSGPLSG-----GAPGAGARDVGDGSSTSS 210
GGGGGGA R+ S+ S S G PG G + GSS SS
Sbjct: 1355 GGGGGGAVPGISAMSRGDLSQRAKDLSKRSFSSQRPGMERQNRRPGPGGK---AGSSGSS 1411
Query: 211 AGSGGSPDHHHHVPPPLLPPGPHKAPDGKAGATRRSLDDLSAPPHHR--SIPNGLHDPSS 268
+G GG PG P + S + S PP R +P PSS
Sbjct: 1412 SGGGGG------------GPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLPPPPPSS 1459
Query: 269 TYIRQLESKVRLLEGDKLLAQQAGSGEFRTLRKGFSPYHSESQLASLP---PSYQDSLQN 325
+ + +L+ + + AG +++ + S + P P ++ L
Sbjct: 1460 SAVFRLDQVIH--------SNPAG------IQQALAQLSSRQGSVTAPGGHPRHKPGLPQ 1505
Query: 326 GPACPAPELPS 336
P P+P P+
Sbjct: 1506 APQGPSPRPPT 1516
>gi|22758136 MAP7 domain containing 2 [Homo sapiens]
Length = 732
Score = 43.5 bits (101), Expect = 4e-04
Identities = 56/190 (29%), Positives = 76/190 (40%), Gaps = 36/190 (18%)
Query: 72 DVNQRLQDDNQELRELCCFLDDDR-----------------QKGRKLAREWQRFGRHAAG 114
D QRL + +E RE C + + ++ RKL + QR + A
Sbjct: 52 DERQRLAKERREEREKCLAAREQQILEKQKRARLQYEKQMEERWRKLEEQRQREDQKRAA 111
Query: 115 AVWHEVARSQQKLRELEARQEALLRENLELKELVLLLDEERAALAATGAASGGGGGGGGA 174
+ +QKLRE E R EA++R +LE + + E + GA G GG A
Sbjct: 112 VE----EKRKQKLREEEERLEAMMRRSLERTQQL-----ELKKKYSWGAPLAIGPGGHDA 162
Query: 175 GSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGSPDHHHHVPPPLLPPGPHK 234
+ S S SL P P R S+S+ SPD HV P L P GP
Sbjct: 163 CDKLS-TSTMSLPKPTE---PPMNKR-----LSSSTVAISYSPDRVFHVCPRLAPLGPLN 213
Query: 235 APDGKAGATR 244
P K+ TR
Sbjct: 214 -PSYKSSPTR 222
>gi|33620755 YEATS domain containing 2 [Homo sapiens]
Length = 1422
Score = 43.1 bits (100), Expect = 5e-04
Identities = 27/69 (39%), Positives = 31/69 (44%), Gaps = 13/69 (18%)
Query: 151 LDEERAALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSS 210
L AA +GA GGGGGGGG SG GG+ G G G G + S+
Sbjct: 791 LQSGSAASGGSGAGGGGGGGGGGG------------SGSGGGGSTGGGGGTAG-GGTQST 837
Query: 211 AGSGGSPDH 219
AG GG H
Sbjct: 838 AGPGGISQH 846
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 43.1 bits (100), Expect = 5e-04
Identities = 58/214 (27%), Positives = 80/214 (37%), Gaps = 34/214 (15%)
Query: 156 AALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGA-----PGAGARDVGDGSSTSS 210
A GA S GGGGG+ + +S L PL+G A P A + + S
Sbjct: 1308 AGYGGYGAGSRAYGGGGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKES 1367
Query: 211 AGSGGSPDHHHHVPPPLLPPGPHKAPDGKAGATRRSLDDLSAPPHHRSIPNGLHDPSSTY 270
+ GG+P PPP P ++AP PHH S P+ H+P
Sbjct: 1368 SEGGGAPQ-----PPPRPPSPRYEAP--------------PPTPHHHS-PHAHHEP---- 1403
Query: 271 IRQLESKVRLLEGDKLLAQQAGSGEFRTLRKGFSPYHSESQLASLPPSYQD----SLQNG 326
+ +L + L +AG G P S L LPP+ LQ G
Sbjct: 1404 VLRLWGASPPDPARRELGYRAGLGSQEKSLPASPPAARRSLLHRLPPTAPGVGPLLLQLG 1463
Query: 327 PACPAPELPSPPSAGYSPAGQKPEAVVHAMKVLE 360
PAP P S A ++PE + ++ LE
Sbjct: 1464 TEPPAPH-PGVSKPWRSAAPEEPERLPLHVRFLE 1496
Score = 40.4 bits (93), Expect = 0.003
Identities = 34/133 (25%), Positives = 48/133 (36%), Gaps = 12/133 (9%)
Query: 213 SGGSPDHHHHVPPPLLPPGPHKAPDGKAGATRRSLDDLSAPPHHRSIPNGLHDPSSTYIR 272
+GGSPD PPP L GP + G G +P HH S G +R
Sbjct: 1028 TGGSPDD----PPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGGGGGSSQGPALR 1083
Query: 273 QLESKVRLLEGDKLLAQQAGSGEFRTLRKGFSPYHSESQLASLPPSYQDSLQNGPACPAP 332
+ R + ++G G L K + LPP+ P+ +P
Sbjct: 1084 YFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPA--------PSPTSP 1135
Query: 333 ELPSPPSAGYSPA 345
P PP A +P+
Sbjct: 1136 ASPQPPPAVAAPS 1148
Score = 38.5 bits (88), Expect = 0.011
Identities = 58/190 (30%), Positives = 74/190 (38%), Gaps = 41/190 (21%)
Query: 156 AALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
++L+A G S GGGGG GAG S + + L G A G GSST G
Sbjct: 1698 SSLSAEGGGSAGGGGGAGAGVASGPELLDTYVAYLDGQAFG--------GSSTP-----G 1744
Query: 216 SPDHHHHVPPPLLPPGPHKAPDGKAGATRRSLDDLSAPPHHRSIPN-GLHDPSSTYIRQL 274
P PP L+ P + G+A L A R P+ GL DP + +
Sbjct: 1745 PP-----YPPQLMTPSKLR---GRA---------LGASGGLRPGPSGGLRDPVTPTSPTV 1787
Query: 275 ESKVRLLEGDKLLAQQAGSGEFRTLRKGFSPYHSESQLASLPPSYQDSL-------QNGP 327
V D LLA +A SG T P E ++ +P SL + GP
Sbjct: 1788 --SVTGAGTDGLLALRACSGP-PTAGVAGGPVAVEPEVPPVPLPTASSLPRKLLPWEEGP 1844
Query: 328 ACPAPELPSP 337
P P LP P
Sbjct: 1845 GPPPPPLPGP 1854
Score = 33.5 bits (75), Expect = 0.37
Identities = 42/170 (24%), Positives = 62/170 (36%), Gaps = 20/170 (11%)
Query: 136 ALLRENLELKELVLLLDEERAALAATGAASGGGGG---GGGAGSRSSIDSQASLSGPLSG 192
ALLR N + + + +A GAAS G G G S+ S + SG L
Sbjct: 433 ALLRANSDTSMAL----PDWMVFSAPGAASSGAPGPTSGSQGQSQPSAPTTKLSSGTLRS 488
Query: 193 GAPGAGARDVGDGSSTSSAGSGGSPDHHHHVPP--PLLPPGPHKAPDGKAGATRRSLDDL 250
+ GAR S G P+ P P P + P G G + L
Sbjct: 489 ASSPRGAR-------ARSPSRGRHPEDAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGSL 541
Query: 251 SAPPHHRSIPNGLHDPS----STYIRQLESKVRLLEGDKLLAQQAGSGEF 296
+ R + + + S +Y Q E ++ L +G+K+ G G F
Sbjct: 542 GSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGF 591
>gi|12707580 paired-like homeobox 2b [Homo sapiens]
Length = 314
Score = 42.7 bits (99), Expect = 6e-04
Identities = 31/90 (34%), Positives = 35/90 (38%), Gaps = 4/90 (4%)
Query: 153 EERAALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAG 212
+ERAA AA AA G G SR +A + P S G PG + G
Sbjct: 156 QERAAAAAAAAAKNGSSGKKSDSSRDDESKEAKSTDPDSTGGPGPNPNPTPSCGANGGGG 215
Query: 213 SGGSPDHHHHVPPPLLPPGPHKAPDGKAGA 242
G SP P P GP P GK GA
Sbjct: 216 GGPSP---AGAPGAAGPGGPGGEP-GKGGA 241
Score = 33.1 bits (74), Expect = 0.48
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
GA GGGGG AG+ + P GGA A A ++ ++A +GG
Sbjct: 209 GANGGGGGGPSPAGAPGAAGPGGPGGEPGKGGAAAAAAAAAAAAAAAAAAAAGG 262
Score = 31.2 bits (69), Expect = 1.8
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 166 GGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGS 216
G GGGGG S + A GP GG PG G ++ ++A + +
Sbjct: 209 GANGGGGGGPSPAGAPGAAGPGGP--GGEPGKGGAAAAAAAAAAAAAAAAA 257
>gi|7706435 headcase [Homo sapiens]
Length = 543
Score = 42.7 bits (99), Expect = 6e-04
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 152 DEERAALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSA 211
DE+ A AA G GGA + ++ A+ P +GGA GAG G ++ ++A
Sbjct: 21 DEQENGAGALAAAGAAGAAAGGALAAAAGCGAAAAGAPGAGGAAGAGGAGTGAANAAAAA 80
Query: 212 GSGGSPDHHHHVP 224
G+ + D + P
Sbjct: 81 GAAAAGDAKNEAP 93
Score = 29.3 bits (64), Expect = 7.0
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 163 AASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGS 216
A S G GAG+ ++ + + +G A G GA G + +AG+GG+
Sbjct: 16 ANSSGDEQENGAGALAAAGAAGAAAGGALAAAAGCGAAAAGAPGAGGAAGAGGA 69
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 42.7 bits (99), Expect = 6e-04
Identities = 36/113 (31%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 156 AALAATGAASGGGGGGGGAGSRSS---IDSQASLSGPLSGGAPGAGARDVGDGSSTSSAG 212
AA AA AA+GGGGGGG GS + + S G + G G GA + ++ S+AG
Sbjct: 283 AAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAG 342
Query: 213 S----GGSPDHHHHVPPPLLPPGPHKAPDGKA-GATRRSLDDLSAPPHHRSIP 260
G H P L +P ++ G + SAPP S P
Sbjct: 343 GFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQP 395
Score = 39.7 bits (91), Expect = 0.005
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
GA GGGGGGGG G G G GAGA ++ ++AG GG
Sbjct: 247 GAGGGGGGGGGGGGGSGG----GGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGG 296
Score = 39.7 bits (91), Expect = 0.005
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSG 214
G SGGGGGGGGAG+ + + + + A G G G G SSAG G
Sbjct: 259 GGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGG---GGGYGGSSAGYG 308
Score = 33.1 bits (74), Expect = 0.48
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 161 TGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGA--GARDVGDGSSTSSAGSGG 215
+G GGGG G G ++ + A+ + +GG G G G G +S GG
Sbjct: 262 SGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGG 318
Score = 32.3 bits (72), Expect = 0.82
Identities = 17/56 (30%), Positives = 22/56 (39%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGSP 217
G GGGGGGG + A + + A G G G S++ G SP
Sbjct: 258 GGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSP 313
Score = 30.8 bits (68), Expect = 2.4
Identities = 43/181 (23%), Positives = 68/181 (37%), Gaps = 17/181 (9%)
Query: 153 EERAALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAG 212
+ ++ AA GAA+GG G G + +Q + + P A + G+ + G
Sbjct: 394 QPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMG 453
Query: 213 -SGGSPDHHHHVPPPLL---PPGPHKAPDGKAGATRRSLDDLSAPPHHRSIPNGLHDPSS 268
S GSP + P L PH P + S PP + P G+ +
Sbjct: 454 RSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSY----GPPGPQRYPIGIQGRTP 509
Query: 269 TYIRQLESKVRLLEGDK-------LLAQQAG-SGEFRTLRKGFSPYHSES-QLASLPPSY 319
+ ++ + GD L+ Q G G ++G PY+S+ Q LPP
Sbjct: 510 GAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQA 569
Query: 320 Q 320
Q
Sbjct: 570 Q 570
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 42.7 bits (99), Expect = 6e-04
Identities = 36/113 (31%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 156 AALAATGAASGGGGGGGGAGSRSS---IDSQASLSGPLSGGAPGAGARDVGDGSSTSSAG 212
AA AA AA+GGGGGGG GS + + S G + G G GA + ++ S+AG
Sbjct: 283 AAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAG 342
Query: 213 S----GGSPDHHHHVPPPLLPPGPHKAPDGKA-GATRRSLDDLSAPPHHRSIP 260
G H P L +P ++ G + SAPP S P
Sbjct: 343 GFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQP 395
Score = 39.7 bits (91), Expect = 0.005
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
GA GGGGGGGG G G G GAGA ++ ++AG GG
Sbjct: 247 GAGGGGGGGGGGGGGSGG----GGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGG 296
Score = 39.7 bits (91), Expect = 0.005
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSG 214
G SGGGGGGGGAG+ + + + + A G G G G SSAG G
Sbjct: 259 GGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGG---GGGYGGSSAGYG 308
Score = 33.1 bits (74), Expect = 0.48
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 161 TGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGA--GARDVGDGSSTSSAGSGG 215
+G GGGG G G ++ + A+ + +GG G G G G +S GG
Sbjct: 262 SGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGG 318
Score = 32.3 bits (72), Expect = 0.82
Identities = 17/56 (30%), Positives = 22/56 (39%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGSP 217
G GGGGGGG + A + + A G G G S++ G SP
Sbjct: 258 GGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSP 313
Score = 30.0 bits (66), Expect = 4.1
Identities = 41/173 (23%), Positives = 66/173 (38%), Gaps = 14/173 (8%)
Query: 153 EERAALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAG 212
+ ++ AA GAA+GG G G + +Q + + P A + G+ + G
Sbjct: 394 QPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMG 453
Query: 213 -SGGSPDHHHHVPPPLL---PPGPHKAPDGKAGATRRSLDDLSAPPHHRSIPNGLHDPSS 268
S GSP + P L PH P + S PP + P G+ +
Sbjct: 454 RSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSY----GPPGPQRYPIGIQGRTP 509
Query: 269 TYIRQLESKVRLLEGDKLLAQQAGSGEFRTLRKGFSPYHSES-QLASLPPSYQ 320
+ ++ + + QQ SG ++G PY+S+ Q LPP Q
Sbjct: 510 GAMAGMQYPQQQMPPQ--YGQQGVSG---YCQQGQQPYYSQQPQPPHLPPQAQ 557
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 42.7 bits (99), Expect = 6e-04
Identities = 36/113 (31%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 156 AALAATGAASGGGGGGGGAGSRSS---IDSQASLSGPLSGGAPGAGARDVGDGSSTSSAG 212
AA AA AA+GGGGGGG GS + + S G + G G GA + ++ S+AG
Sbjct: 283 AAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAG 342
Query: 213 S----GGSPDHHHHVPPPLLPPGPHKAPDGKA-GATRRSLDDLSAPPHHRSIP 260
G H P L +P ++ G + SAPP S P
Sbjct: 343 GFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQP 395
Score = 39.7 bits (91), Expect = 0.005
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGG 215
GA GGGGGGGG G G G GAGA ++ ++AG GG
Sbjct: 247 GAGGGGGGGGGGGGGSGG----GGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGG 296
Score = 39.7 bits (91), Expect = 0.005
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSG 214
G SGGGGGGGGAG+ + + + + A G G G G SSAG G
Sbjct: 259 GGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGG---GGGYGGSSAGYG 308
Score = 33.1 bits (74), Expect = 0.48
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 161 TGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGA--GARDVGDGSSTSSAGSGG 215
+G GGGG G G ++ + A+ + +GG G G G G +S GG
Sbjct: 262 SGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGG 318
Score = 32.3 bits (72), Expect = 0.82
Identities = 17/56 (30%), Positives = 22/56 (39%)
Query: 162 GAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGSP 217
G GGGGGGG + A + + A G G G S++ G SP
Sbjct: 258 GGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSP 313
Score = 30.0 bits (66), Expect = 4.1
Identities = 41/173 (23%), Positives = 66/173 (38%), Gaps = 14/173 (8%)
Query: 153 EERAALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAG 212
+ ++ AA GAA+GG G G + +Q + + P A + G+ + G
Sbjct: 394 QPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMG 453
Query: 213 -SGGSPDHHHHVPPPLL---PPGPHKAPDGKAGATRRSLDDLSAPPHHRSIPNGLHDPSS 268
S GSP + P L PH P + S PP + P G+ +
Sbjct: 454 RSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSY----GPPGPQRYPIGIQGRTP 509
Query: 269 TYIRQLESKVRLLEGDKLLAQQAGSGEFRTLRKGFSPYHSES-QLASLPPSYQ 320
+ ++ + + QQ SG ++G PY+S+ Q LPP Q
Sbjct: 510 GAMAGMQYPQQQMPPQ--YGQQGVSG---YCQQGQQPYYSQQPQPPHLPPQAQ 557
>gi|89357932 keratin 5b [Homo sapiens]
Length = 520
Score = 42.0 bits (97), Expect = 0.001
Identities = 49/209 (23%), Positives = 84/209 (40%), Gaps = 24/209 (11%)
Query: 21 EELLRWSKEELARRLRRAEGEKVGLMLE-HGGLMRDVNRRLQQHLLEIRGLKDVNQRLQD 79
EE+ R SK E A L + + +++ + + HG M++ ++ Q EI+ L+ + L+
Sbjct: 290 EEIARSSKAE-AEALYQTKYQELQVSAQLHGDRMQETKVQISQLHQEIQRLQSQTENLKK 348
Query: 80 DNQELRELCCFLDDDRQKGRKLAREWQRFGRHAAGAVWHEVARSQQKLRELEARQEALLR 139
N L+ + D Q+G ++ Q A+ + L E + L
Sbjct: 349 QNASLQAA---ITDAEQRGELALKDAQAKVDELEAALRMAKQNLARLLCEYQELTSTKLS 405
Query: 140 ENLELKELVLLLDEERAALAAT-----------GAASGGGGGGGGAGSRSSIDSQASLSG 188
++E+ LL+ E ++ G+A GG GGG GS + S
Sbjct: 406 LDVEIATYRRLLEGEECRMSGECTSQVTISSVGGSAVMSGGVGGGLGSTCGLGS------ 459
Query: 189 PLSGGAPGAGARDVGDGSSTSSAGSGGSP 217
G+PG+ + G S GSG P
Sbjct: 460 --GKGSPGSCCTSIVTGGSNIILGSGKDP 486
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 42.0 bits (97), Expect = 0.001
Identities = 69/264 (26%), Positives = 93/264 (35%), Gaps = 72/264 (27%)
Query: 131 EARQEALLRENLELKELVLLLDEERAAL-------AATGAASGGGGGGGGAGSRSSIDSQ 183
+A + ALL + + K+L + +R+A A G GG GGGGG G
Sbjct: 30 QAGRNALLSDISKGKKLKKTVTNDRSAPILDKPKGAGAGGGGGGFGGGGGFGGGGGGGGG 89
Query: 184 ASLSGPLSGGAPGAGAR-DVGDGSSTSSAG----SGGSPDHHHHVPPPLLPPG------- 231
S G GG PG G G S+A SGGS PPLLPPG
Sbjct: 90 GSFGG---GGPPGLGGLFQAGMPKLRSTANRDNDSGGSR-------PPLLPPGGRSTSAK 139
Query: 232 PHKAPDGKAGATRRSLDDLSAPPHHR------------SIPNGLHDPSSTYIRQLESKVR 279
P P G S S PP + S P+ + P + R ++S
Sbjct: 140 PFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPH 199
Query: 280 L---------------------LEGDKLLAQQAGSGEFRTLRKGFSPYHSESQLAS---L 315
G++ A G G R SP S S ++ L
Sbjct: 200 NRGSPPVPGGPRQPSPGPTPPPFPGNRGTA--LGGGSIRQ-----SPLSSSSPFSNRPPL 252
Query: 316 PPSYQDSLQNGPACPAPELPSPPS 339
PP+ +L + P P P + + PS
Sbjct: 253 PPTPSRALDDKPPPPPPPVGNRPS 276
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 42.0 bits (97), Expect = 0.001
Identities = 69/264 (26%), Positives = 93/264 (35%), Gaps = 72/264 (27%)
Query: 131 EARQEALLRENLELKELVLLLDEERAAL-------AATGAASGGGGGGGGAGSRSSIDSQ 183
+A + ALL + + K+L + +R+A A G GG GGGGG G
Sbjct: 30 QAGRNALLSDISKGKKLKKTVTNDRSAPILDKPKGAGAGGGGGGFGGGGGFGGGGGGGGG 89
Query: 184 ASLSGPLSGGAPGAGAR-DVGDGSSTSSAG----SGGSPDHHHHVPPPLLPPG------- 231
S G GG PG G G S+A SGGS PPLLPPG
Sbjct: 90 GSFGG---GGPPGLGGLFQAGMPKLRSTANRDNDSGGSR-------PPLLPPGGRSTSAK 139
Query: 232 PHKAPDGKAGATRRSLDDLSAPPHHR------------SIPNGLHDPSSTYIRQLESKVR 279
P P G S S PP + S P+ + P + R ++S
Sbjct: 140 PFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPH 199
Query: 280 L---------------------LEGDKLLAQQAGSGEFRTLRKGFSPYHSESQLAS---L 315
G++ A G G R SP S S ++ L
Sbjct: 200 NRGSPPVPGGPRQPSPGPTPPPFPGNRGTA--LGGGSIRQ-----SPLSSSSPFSNRPPL 252
Query: 316 PPSYQDSLQNGPACPAPELPSPPS 339
PP+ +L + P P P + + PS
Sbjct: 253 PPTPSRALDDKPPPPPPPVGNRPS 276
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.131 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,203,104
Number of Sequences: 37866
Number of extensions: 1114749
Number of successful extensions: 16957
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 673
Number of HSP's that attempted gapping in prelim test: 9578
Number of HSP's gapped (non-prelim): 4752
length of query: 419
length of database: 18,247,518
effective HSP length: 105
effective length of query: 314
effective length of database: 14,271,588
effective search space: 4481278632
effective search space used: 4481278632
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.