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Search of human proteins with 223633982
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|223633982 hypothetical protein LOC729993 isoform 2 [Homo
sapiens]
(262 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|223633982 hypothetical protein LOC729993 isoform 2 [Homo sapi... 552 e-158
gi|223633980 hypothetical protein LOC729993 isoform 1 [Homo sapi... 483 e-137
gi|169215850 PREDICTED: transmembrane protein 46-like [Homo sapi... 169 3e-42
gi|113429443 PREDICTED: transmembrane protein 46-like [Homo sapi... 169 3e-42
gi|211904177 hypothetical protein LOC388336 [Homo sapiens] 135 5e-32
gi|223633890 hypothetical protein LOC729956 [Homo sapiens] 116 2e-26
gi|56090523 shisa homolog 2 [Homo sapiens] 55 6e-08
gi|122937450 shisa homolog 3 [Homo sapiens] 52 5e-07
gi|39930575 shisa homolog 4 [Homo sapiens] 47 1e-05
gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo ... 35 0.051
gi|239748639 PREDICTED: hypothetical protein XP_002346752 [Homo ... 34 0.11
gi|55956899 keratin 9 [Homo sapiens] 34 0.15
gi|239751194 PREDICTED: hypothetical protein XP_002347745 [Homo ... 33 0.25
gi|239745684 PREDICTED: hypothetical protein XP_002343515 [Homo ... 33 0.25
gi|239753335 PREDICTED: hypothetical protein [Homo sapiens] 33 0.33
gi|31543906 ubiquitin-conjugating enzyme E2Q [Homo sapiens] 33 0.33
gi|120587019 zinc finger protein 318 [Homo sapiens] 33 0.33
gi|38505159 transcription factor-like 5 protein [Homo sapiens] 33 0.33
gi|222352166 nel-like 1 isoform 2 precursor [Homo sapiens] 32 0.73
gi|222352164 nel-like 1 isoform 1 precursor [Homo sapiens] 32 0.73
gi|157743247 F-box protein 45 [Homo sapiens] 32 0.73
gi|27436910 partner and localizer of BRCA2 [Homo sapiens] 31 0.96
gi|239756701 PREDICTED: similar to hCG1986016 [Homo sapiens] 31 0.96
gi|169167848 PREDICTED: hypothetical protein LOC100132916 [Homo ... 31 1.3
gi|169160983 PREDICTED: hypothetical protein [Homo sapiens] 31 1.3
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 31 1.3
gi|169167926 PREDICTED: hypothetical protein LOC100132916 [Homo ... 31 1.3
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 31 1.3
gi|169167633 PREDICTED: hypothetical protein LOC100132916 [Homo ... 31 1.3
gi|4885433 mitogen-activated protein kinase 8 interacting protei... 30 2.1
>gi|223633982 hypothetical protein LOC729993 isoform 2 [Homo
sapiens]
Length = 262
Score = 552 bits (1423), Expect = e-158
Identities = 262/262 (100%), Positives = 262/262 (100%)
Query: 1 MCGPRRLAAPGSSLGSFGRASRGGRRGSSGGRAAEPGLGDTMRRVLRLLLGCFLTELCAR 60
MCGPRRLAAPGSSLGSFGRASRGGRRGSSGGRAAEPGLGDTMRRVLRLLLGCFLTELCAR
Sbjct: 1 MCGPRRLAAPGSSLGSFGRASRGGRRGSSGGRAAEPGLGDTMRRVLRLLLGCFLTELCAR 60
Query: 61 VCRAQERAGHGQLAQLGGVLLLAGGNRSGAASGEASEGAEASDAPPTRAPTPDFCRGYFD 120
VCRAQERAGHGQLAQLGGVLLLAGGNRSGAASGEASEGAEASDAPPTRAPTPDFCRGYFD
Sbjct: 61 VCRAQERAGHGQLAQLGGVLLLAGGNRSGAASGEASEGAEASDAPPTRAPTPDFCRGYFD 120
Query: 121 VMGQWDPPFNCSSGDFIFCCGTCGFRFCCTFKKRRLNQSTCTNYDTPLWLNTGKPPARKD 180
VMGQWDPPFNCSSGDFIFCCGTCGFRFCCTFKKRRLNQSTCTNYDTPLWLNTGKPPARKD
Sbjct: 121 VMGQWDPPFNCSSGDFIFCCGTCGFRFCCTFKKRRLNQSTCTNYDTPLWLNTGKPPARKD 180
Query: 181 DPLHDPTKDKTNLIVYIICGVVAVMVLVGIFTKLGLEKAHRPQREHMSRLYDNLLFMEAQ 240
DPLHDPTKDKTNLIVYIICGVVAVMVLVGIFTKLGLEKAHRPQREHMSRLYDNLLFMEAQ
Sbjct: 181 DPLHDPTKDKTNLIVYIICGVVAVMVLVGIFTKLGLEKAHRPQREHMSRLYDNLLFMEAQ 240
Query: 241 ISFQEDEPAPGEWSVGLQTWTV 262
ISFQEDEPAPGEWSVGLQTWTV
Sbjct: 241 ISFQEDEPAPGEWSVGLQTWTV 262
>gi|223633980 hypothetical protein LOC729993 isoform 1 [Homo
sapiens]
Length = 465
Score = 483 bits (1244), Expect = e-137
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MCGPRRLAAPGSSLGSFGRASRGGRRGSSGGRAAEPGLGDTMRRVLRLLLGCFLTELCAR 60
MCGPRRLAAPGSSLGSFGRASRGGRRGSSGGRAAEPGLGDTMRRVLRLLLGCFLTELCAR
Sbjct: 1 MCGPRRLAAPGSSLGSFGRASRGGRRGSSGGRAAEPGLGDTMRRVLRLLLGCFLTELCAR 60
Query: 61 VCRAQERAGHGQLAQLGGVLLLAGGNRSGAASGEASEGAEASDAPPTRAPTPDFCRGYFD 120
VCRAQERAGHGQLAQLGGVLLLAGGNRSGAASGEASEGAEASDAPPTRAPTPDFCRGYFD
Sbjct: 61 VCRAQERAGHGQLAQLGGVLLLAGGNRSGAASGEASEGAEASDAPPTRAPTPDFCRGYFD 120
Query: 121 VMGQWDPPFNCSSGDFIFCCGTCGFRFCCTFKKRRLNQSTCTNYDTPLWLNTGKPPARKD 180
VMGQWDPPFNCSSGDFIFCCGTCGFRFCCTFKKRRLNQSTCTNYDTPLWLNTGKPPARKD
Sbjct: 121 VMGQWDPPFNCSSGDFIFCCGTCGFRFCCTFKKRRLNQSTCTNYDTPLWLNTGKPPARKD 180
Query: 181 DPLHDPTKDKTNLIVYIICGVVAVMVLVGIFTKLGLEKAHRPQREHMSR 229
DPLHDPTKDKTNLIVYIICGVVAVMVLVGIFTKLGLEKAHRPQREHMSR
Sbjct: 181 DPLHDPTKDKTNLIVYIICGVVAVMVLVGIFTKLGLEKAHRPQREHMSR 229
>gi|169215850 PREDICTED: transmembrane protein 46-like [Homo
sapiens]
Length = 547
Score = 169 bits (427), Expect = 3e-42
Identities = 84/159 (52%), Positives = 106/159 (66%), Gaps = 7/159 (4%)
Query: 81 LLAGGNRSGAASGEASEGAEASDAPPTRAPTP-DFCRGYFDVMGQWDPPFNCSSGDFIFC 139
LL SG A ++G A P T AP D CRGY+DVMGQWDPPFNCSSG + FC
Sbjct: 28 LLLARPPSGRAGAPEAQGPAA---PGTTAPEGGDRCRGYYDVMGQWDPPFNCSSGAYSFC 84
Query: 140 CGTCGFRFCCTFKKRRLNQSTCTNYDTPLWLNTGKPPARKDDPL--HDPTKDKTNLIVYI 197
CGTCG+RFCC RRL+QS C+NYDTP W+ TG+PPAR D DP +++++ VY
Sbjct: 85 CGTCGYRFCCHDGPRRLDQSRCSNYDTPAWVQTGRPPARARDTAAPRDPGRERSHTAVYA 144
Query: 198 ICGVVAVMVLVGIFTKLGLEKAHRPQ-REHMSRLYDNLL 235
+CGV A++VL GI +LGLE+AH P+ R ++R LL
Sbjct: 145 VCGVAALLVLAGIGARLGLERAHSPRARRTVTRALTELL 183
>gi|113429443 PREDICTED: transmembrane protein 46-like [Homo
sapiens]
Length = 492
Score = 169 bits (427), Expect = 3e-42
Identities = 84/159 (52%), Positives = 106/159 (66%), Gaps = 7/159 (4%)
Query: 81 LLAGGNRSGAASGEASEGAEASDAPPTRAPTP-DFCRGYFDVMGQWDPPFNCSSGDFIFC 139
LL SG A ++G A P T AP D CRGY+DVMGQWDPPFNCSSG + FC
Sbjct: 28 LLLARPPSGRAGAPEAQGPAA---PGTTAPEGGDRCRGYYDVMGQWDPPFNCSSGAYSFC 84
Query: 140 CGTCGFRFCCTFKKRRLNQSTCTNYDTPLWLNTGKPPARKDDPL--HDPTKDKTNLIVYI 197
CGTCG+RFCC RRL+QS C+NYDTP W+ TG+PPAR D DP +++++ VY
Sbjct: 85 CGTCGYRFCCHDGPRRLDQSRCSNYDTPAWVQTGRPPARARDTAAPRDPGRERSHTAVYA 144
Query: 198 ICGVVAVMVLVGIFTKLGLEKAHRPQ-REHMSRLYDNLL 235
+CGV A++VL GI +LGLE+AH P+ R ++R LL
Sbjct: 145 VCGVAALLVLAGIGARLGLERAHSPRARRTVTRALTELL 183
>gi|211904177 hypothetical protein LOC388336 [Homo sapiens]
Length = 551
Score = 135 bits (339), Expect = 5e-32
Identities = 75/204 (36%), Positives = 108/204 (52%), Gaps = 21/204 (10%)
Query: 43 RRVLRLLLGCFLTELCARVCRAQERAGHGQLA---------QLGGVLLLAGGNRSGAA-- 91
R +L LLL +L V A+ RA + L+ + GG L G +G A
Sbjct: 5 RLLLLLLLSLESLDLLPSVHGARGRAANRTLSAGGAAVGGRRAGGALARGGRELNGTARA 64
Query: 92 ------SGEASEGAEASDAPPTRAPTPDFCRGYFDVMGQWDPPFNCSSGD--FIFCCGTC 143
+ A A A + A T + C GY+DV GQ+D F C++ + +++CCGTC
Sbjct: 65 PGIPEAGSRRGQPAAAVAAAASAAVTYETCWGYYDVSGQYDKEFECNNSESGYLYCCGTC 124
Query: 144 GFRFCCTFKKRRLNQSTCTNYDTPLWLNTGKPPARKDDP--LHDPTKDKTNLIVYIICGV 201
+RFCC + +L+Q CTNY +P+W+ T P +DP KDKTN VYI CGV
Sbjct: 125 YYRFCCKKRHEKLDQRQCTNYQSPVWVQTPSTKVVSPGPENKYDPEKDKTNFTVYITCGV 184
Query: 202 VAVMVLVGIFTKLGLEKAHRPQRE 225
+A +++ G+F K+ +KAHRP RE
Sbjct: 185 IAFVIVAGVFAKVSYDKAHRPPRE 208
>gi|223633890 hypothetical protein LOC729956 [Homo sapiens]
Length = 538
Score = 116 bits (291), Expect = 2e-26
Identities = 62/178 (34%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 73 LAQLGGVLLLAGGNRSGAASGEASEGAEASDAPPTRAPTPDFCRGYFDVMGQWDPPFNCS 132
L +L G L GG S A+G + A + A P + C GY+DVMGQ+D FNCS
Sbjct: 40 LRRLTGALTGGGGAASPGANGTRTGPAGGAGAAARAPPPAELCHGYYDVMGQYDATFNCS 99
Query: 133 SGDFIFCCGTCGFRFCCTFKKRRLNQSTCTNYDTPLWLNTGKPPA--------------- 177
+G + FCCGTC +RFCC + RL Q++C+NYDTP W T P A
Sbjct: 100 TGSYRFCCGTCHYRFCCEHRHMRLAQASCSNYDTPRWATTPPPLAGGAGGAGGAGGGPGP 159
Query: 178 ---------RKDDPLHDPTKDKTNLIVYIICGVVAVMVLVGIFTKLGLEKAHRPQREH 226
R + Y++CGV++ + VG+ K+ KA R R H
Sbjct: 160 GQAGWLEGGRTGGAGGRGGEGPGGSTAYVVCGVISFALAVGVGAKVAFSKASRAPRAH 217
>gi|56090523 shisa homolog 2 [Homo sapiens]
Length = 295
Score = 55.1 bits (131), Expect = 6e-08
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Query: 113 DFCRGYFDVMGQWDPPFNC----SSGDFIFCCGTCGFRFCCTFKKRRLNQSTCTNYDTPL 168
++C G+ D G W F C GD CCG+C R+CC+ + RL+Q C D
Sbjct: 36 EYCHGWLDAQGVWRIGFQCPERFDGGDATICCGSCALRYCCSSAEARLDQGGC---DNDR 92
Query: 169 WLNTGKP-PARKDDPLHDPTKDKTNLIVYIICGVVAVMVLVGIFTKLGLEKAHRPQRE 225
G+P A KD P D + + I+ V +++G + RP+++
Sbjct: 93 QQGAGEPGRADKDGP--DGSAVPIYVPFLIVGSVFVAFIILGSLVAACCCRCLRPKQD 148
>gi|122937450 shisa homolog 3 [Homo sapiens]
Length = 238
Score = 52.0 bits (123), Expect = 5e-07
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 113 DFCRGYFDVMGQWDPPFNCSSG----DFIFCCGTCGFRFCCTFKKRRLNQSTCTN 163
++C G+ DV G + F C D CCG+C R+CC RL Q CTN
Sbjct: 26 EYCHGWVDVQGNYHEGFQCPEDFDTLDATICCGSCALRYCCAAADARLEQGGCTN 80
>gi|39930575 shisa homolog 4 [Homo sapiens]
Length = 197
Score = 47.4 bits (111), Expect = 1e-05
Identities = 19/35 (54%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 115 CRGYFDVMGQWDPPFNCSSGDFIFCCGTCGFRFCC 149
C Y D G W P FNC F FCCGTC R+CC
Sbjct: 31 CLWYLDRNGSWHPGFNCEF--FTFCCGTCYHRYCC 63
>gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo
sapiens]
Length = 284
Score = 35.4 bits (80), Expect = 0.051
Identities = 26/71 (36%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Query: 3 GPRRLAAPGSSLGSFGRASRGGRRGSSGGRAAEPGLGDTMRRVLRLLLGCFLTELCARVC 62
G R +A G G G RG RRG GG P +RR L L G R+
Sbjct: 167 GSGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGP-RAQAVRRRLSALRGRGRRRRLKRLR 225
Query: 63 RAQERAGHGQL 73
RAQE +G L
Sbjct: 226 RAQETSGAAAL 236
>gi|239748639 PREDICTED: hypothetical protein XP_002346752 [Homo
sapiens]
Length = 286
Score = 34.3 bits (77), Expect = 0.11
Identities = 26/71 (36%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Query: 3 GPRRLAAPGSSLGSFGRASRGGRRGSSGGRAAEPGLGDTMRRVLRLLLGCFLTELCARVC 62
G R +A G G G RG RRG GG P +RR L L G R+
Sbjct: 169 GGGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGP-RAQAVRRRLSALRGRGRRRRLKRLR 227
Query: 63 RAQERAGHGQL 73
RAQE G L
Sbjct: 228 RAQETRGAAAL 238
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 33.9 bits (76), Expect = 0.15
Identities = 17/33 (51%), Positives = 19/33 (57%)
Query: 7 LAAPGSSLGSFGRASRGGRRGSSGGRAAEPGLG 39
L G S GS+GR SRGG GS GG + G G
Sbjct: 475 LGGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYG 507
>gi|239751194 PREDICTED: hypothetical protein XP_002347745 [Homo
sapiens]
Length = 325
Score = 33.1 bits (74), Expect = 0.25
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 3 GPR-RLAAPGSSLGSFGRASRGGRRGSSGGRAAEPGLGDTMRRVLRLLLGCFLTELCARV 61
GPR RL G+ A+R G G +GG + +PG+ T R + + L ARV
Sbjct: 40 GPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVG------VAALHARV 93
Query: 62 CRAQERAG-HGQLAQLG 77
RA +RAG H A+LG
Sbjct: 94 -RASQRAGRHPVEAELG 109
>gi|239745684 PREDICTED: hypothetical protein XP_002343515 [Homo
sapiens]
Length = 368
Score = 33.1 bits (74), Expect = 0.25
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 3 GPR-RLAAPGSSLGSFGRASRGGRRGSSGGRAAEPGLGDTMRRVLRLLLGCFLTELCARV 61
GPR RL G+ A+R G G +GG + +PG+ T R + + L ARV
Sbjct: 83 GPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVG------VAALHARV 136
Query: 62 CRAQERAG-HGQLAQLG 77
RA +RAG H A+LG
Sbjct: 137 -RASQRAGRHPVEAELG 152
>gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]
Length = 113
Score = 32.7 bits (73), Expect = 0.33
Identities = 33/97 (34%), Positives = 39/97 (40%), Gaps = 7/97 (7%)
Query: 5 RRLAAPGSSLGSFGRASRGGRRGSSGGRAAEPGLGDTMRRVLRLLLGCFLTELCARVCRA 64
RR+ + G G RA GG GS + PG G R R G AR A
Sbjct: 3 RRILSWGDQAGERARAPSGG--GSGQAQRPGPGRGSWRRPPRRQRPGPAAPSPPARGAAA 60
Query: 65 QERAGHGQLAQLGGVLLLAGG--NRSGAASGEASEGA 99
R+G G AQ GG GG R+GA G G+
Sbjct: 61 WGRSGGGPAAQSGGD---GGGLPRRAGAEPGGRGGGS 94
>gi|31543906 ubiquitin-conjugating enzyme E2Q [Homo sapiens]
Length = 422
Score = 32.7 bits (73), Expect = 0.33
Identities = 29/85 (34%), Positives = 35/85 (41%), Gaps = 15/85 (17%)
Query: 10 PGSSLGSFGRASRGGRRGSSGGRAAEPGLGDTMRRVLRLLLGCFLTELCARVCRAQE--R 67
PG LG G A G+ GG PG G +RR L+LL F R E R
Sbjct: 14 PGQQLGGQGAAP-----GAGGGPGGGPGPGPCLRRELKLLESIF--------HRGHERFR 60
Query: 68 AGHGQLAQLGGVLLLAGGNRSGAAS 92
L +L LLAG +GA +
Sbjct: 61 IASACLDELSCEFLLAGAGGAGAGA 85
>gi|120587019 zinc finger protein 318 [Homo sapiens]
Length = 2279
Score = 32.7 bits (73), Expect = 0.33
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 6 RLAAPGSSLGSFGRASRGGRRGSSGGRAAEPGL-GDTMRRVLRLLLG 51
R ++ G S + R RG G SG R PGL D++ + LR+ +G
Sbjct: 107 RGSSRGESRADYARDGRGDHPGDSGSRRRSPGLCSDSLEKSLRITVG 153
>gi|38505159 transcription factor-like 5 protein [Homo sapiens]
Length = 500
Score = 32.7 bits (73), Expect = 0.33
Identities = 39/130 (30%), Positives = 54/130 (41%), Gaps = 15/130 (11%)
Query: 1 MCGPRRLAAPGSSLGSFGRASRGGRRGSSGGRAA--EPGLGDTMRRV-LRLLLGCFLTEL 57
M GP P + + G A+ G+ GG AA EPGL T + L + T+L
Sbjct: 1 MSGPGPREPPPEAGAAGGEAAV---EGAGGGDAALGEPGLSFTTTDLSLVEMTEVEYTQL 57
Query: 58 CARVCRAQERAGHGQL-AQLGGVLLLAGGNRSGAASGEASEGAEASDAP------PTRAP 110
+C E A G+L +L LL A G GA +G + G + AP P+
Sbjct: 58 QHILCSHMEAAADGELETRLNSALLAAAG--PGAGAGGFAAGGQGGAAPVYPVLCPSALA 115
Query: 111 TPDFCRGYFD 120
C G+ D
Sbjct: 116 ADAPCLGHID 125
>gi|222352166 nel-like 1 isoform 2 precursor [Homo sapiens]
Length = 763
Score = 31.6 bits (70), Expect = 0.73
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Query: 115 CRGYFDV-MGQWDPPFNCSSGDFIF----CCGTC-GFRFCCTFKKRRLNQSTCTNYDT 166
CRG V + + PP NCS D I CC C G FC K N S C N++T
Sbjct: 356 CRGGVLVKITEMCPPLNCSEKDHILPENQCCRVCRGHNFCAEGPKCGEN-SECKNWNT 412
>gi|222352164 nel-like 1 isoform 1 precursor [Homo sapiens]
Length = 810
Score = 31.6 bits (70), Expect = 0.73
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Query: 115 CRGYFDV-MGQWDPPFNCSSGDFIF----CCGTC-GFRFCCTFKKRRLNQSTCTNYDT 166
CRG V + + PP NCS D I CC C G FC K N S C N++T
Sbjct: 356 CRGGVLVKITEMCPPLNCSEKDHILPENQCCRVCRGHNFCAEGPKCGEN-SECKNWNT 412
>gi|157743247 F-box protein 45 [Homo sapiens]
Length = 286
Score = 31.6 bits (70), Expect = 0.73
Identities = 28/69 (40%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 9 APGSSLGSFGRASRGGRRGS---SGGRAAEPGLGDTMRRVLRLLLGCF-LTEL--CARVC 62
APG+ S G GG G+ SG AA G G RVL L+ L+EL CA VC
Sbjct: 5 APGAGAASGGAGCSGGGAGAGAGSGSGAAGAG-GRLPSRVLELVFSYLELSELRSCALVC 63
Query: 63 RAQERAGHG 71
+ R HG
Sbjct: 64 KHWYRCLHG 72
>gi|27436910 partner and localizer of BRCA2 [Homo sapiens]
Length = 1186
Score = 31.2 bits (69), Expect = 0.96
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 110 PTPDFCRGYFDVMGQWDPPFNCSSGDFIFCCGTCGFRFCCTFKKRRLNQSTCTNYDTPLW 169
PT D C F ++G P F G + R CCT + L S C DT +
Sbjct: 719 PTTDMCSPAFPILGT-TPAFG-PQGSYEKASTEVAGRTCCTPQLAHLKDSVCLASDTKQF 776
Query: 170 LNTGKP 175
++G P
Sbjct: 777 DSSGSP 782
>gi|239756701 PREDICTED: similar to hCG1986016 [Homo sapiens]
Length = 325
Score = 31.2 bits (69), Expect = 0.96
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 3 GPR-RLAAPGSSLGSFGRASRGGRRGSSGGRAAEPGLGDTMRRVLRLLLGCFLTELCARV 61
GPR RL G+ A+R G G +GG + +PG+ T R + + L AR
Sbjct: 40 GPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVG------VAALHARF 93
Query: 62 CRAQERAG-HGQLAQLG 77
RA +RAG H A+LG
Sbjct: 94 -RASQRAGRHPVEAELG 109
>gi|169167848 PREDICTED: hypothetical protein LOC100132916 [Homo
sapiens]
Length = 160
Score = 30.8 bits (68), Expect = 1.3
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
Query: 115 CRGYFDVMGQWDPPFNC----SSGDFIFCCGTCGFRFCCT 150
C GY+ + + PF C +CCG ++CC+
Sbjct: 8 CSGYYSLNQSFVEPFQCPRRGEGAALQYCCGFADLKYCCS 47
>gi|169160983 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 30.8 bits (68), Expect = 1.3
Identities = 30/98 (30%), Positives = 38/98 (38%), Gaps = 9/98 (9%)
Query: 15 GSFGRASRGGRRGSSGGRAAEPGLGDTMRRVLRLLLGCFLTELCARVCRAQERAGHGQLA 74
G+ GR R RG SGG G RR L +L C + R G G A
Sbjct: 116 GALGRRLRPSPRGKSGG-----GSRGGSRRAL-VLSSLQDPPRRGHRCLRERRRGSGVAA 169
Query: 75 QLGGVLLLAGGNRSGAASGEASEGAEASDAPPTRAPTP 112
G LL G R A + ++GA + + P R P
Sbjct: 170 ---GTLLRGRGRRREAGTRRPAQGARSEEDPGARRLLP 204
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 30.8 bits (68), Expect = 1.3
Identities = 19/50 (38%), Positives = 22/50 (44%)
Query: 3 GPRRLAAPGSSLGSFGRASRGGRRGSSGGRAAEPGLGDTMRRVLRLLLGC 52
G R+ PG G AS G GS+ GR +PG G RR GC
Sbjct: 433 GRRQDPEPGPRAPRGGPASSGWHAGSAAGRGWDPGGGSRARRRAARGRGC 482
>gi|169167926 PREDICTED: hypothetical protein LOC100132916 [Homo
sapiens]
Length = 160
Score = 30.8 bits (68), Expect = 1.3
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
Query: 115 CRGYFDVMGQWDPPFNC----SSGDFIFCCGTCGFRFCCT 150
C GY+ + + PF C +CCG ++CC+
Sbjct: 8 CSGYYSLNQSFVEPFQCPRRGEGAALQYCCGFADLKYCCS 47
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 30.8 bits (68), Expect = 1.3
Identities = 19/50 (38%), Positives = 22/50 (44%)
Query: 3 GPRRLAAPGSSLGSFGRASRGGRRGSSGGRAAEPGLGDTMRRVLRLLLGC 52
G R+ PG G AS G GS+ GR +PG G RR GC
Sbjct: 433 GRRQDPEPGPRAPRGGPASSGWHAGSAAGRGWDPGGGSRARRRAARGRGC 482
>gi|169167633 PREDICTED: hypothetical protein LOC100132916 [Homo
sapiens]
Length = 160
Score = 30.8 bits (68), Expect = 1.3
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
Query: 115 CRGYFDVMGQWDPPFNC----SSGDFIFCCGTCGFRFCCT 150
C GY+ + + PF C +CCG ++CC+
Sbjct: 8 CSGYYSLNQSFVEPFQCPRRGEGAALQYCCGFADLKYCCS 47
>gi|4885433 mitogen-activated protein kinase 8 interacting protein 1
[Homo sapiens]
Length = 711
Score = 30.0 bits (66), Expect = 2.1
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 11/102 (10%)
Query: 20 ASRGGRRGSSGGRAAEPGLGDTMRRVLRLLLGCFLTELCARVCRAQERAGHGQLAQLGGV 79
ASRG +G S G++ PG GDT R L F +V R+Q+ + L +
Sbjct: 136 ASRG--QGQSQGQSQGPGSGDTYRPKRPTTLNLF-----PQVPRSQDTLNNNSLGKKHSW 188
Query: 80 LLLAGGNRSGAASGEASEGAE----ASDAPPTRAPTPDFCRG 117
+ S +GE + E + + PP P P RG
Sbjct: 189 QDRVSRSSSPLKTGEQTPPHEHICLSDELPPQSGPAPTTDRG 230
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.139 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,123,357
Number of Sequences: 37866
Number of extensions: 583241
Number of successful extensions: 3257
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 3147
Number of HSP's gapped (non-prelim): 159
length of query: 262
length of database: 18,247,518
effective HSP length: 100
effective length of query: 162
effective length of database: 14,460,918
effective search space: 2342668716
effective search space used: 2342668716
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.