Guide to the Human Genome
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Name: FAM159B Sequence: fasta or formatted (160aa) NCBI GI: 169167926
Description:

PREDICTED: hypothetical protein LOC100132916

Not currently referenced in the text

Other entries for this name:
alt prot {160aa} PREDICTED: hypothetical protein LOC100132916
alt mRNA {160aa} PREDICTED: hypothetical protein LOC100132916
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         15           2
 C cysteine            5.0          8           2
 D aspartate           3.1          5           2
 E glutamate           5.6          9           1
 F phenylalanine       3.8          6           1
 G glycine             6.9         11           1
 H histidine           1.9          3           1
 I isoleucine          5.0          8           2
 K lysine              5.0          8           1
 L leucine            11.2         18           2
 M methionine          1.9          3           1
 N asparagine          3.8          6           1
 P proline             3.8          6           1
 Q glutamine           5.0          8           1
 R arginine            2.5          4           2
 S serine             10.0         16           2
 T threonine           5.0          8           1
 V valine              3.1          5           1
 W tryptophan          0.6          1           1
 Y tyrosine            7.5         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein LOC100132916 
FAM159B               1.000   PREDICTED: hypothetical protein LOC100132916 
FAM159B               0.990   PREDICTED: hypothetical protein LOC100132916 
FAM159A               0.369   hypothetical protein LOC348378 
SHISA2                0.056   shisa homolog 2 
SHISA3                0.046   shisa homolog 3 
LOC440829             0.033   PREDICTED: transmembrane protein 46-like 
LOC440829             0.033   PREDICTED: transmembrane protein 46-like 
FLJ45455              0.029   hypothetical protein LOC388336 
SHISA4                0.026   shisa homolog 4 
KIRREL3               0.026   kin of IRRE like 3 isoform 1 
LOC729956             0.026   hypothetical protein LOC729956 
RNF144B               0.023   IBR domain containing 2 
LOC729993             0.020   hypothetical protein LOC729993 isoform 2 
LOC729993             0.020   hypothetical protein LOC729993 isoform 1 
SHISA5                0.020   scotin 
KIAA1644              0.016   hypothetical protein LOC85352 
NCAM2                 0.016   neural cell adhesion molecule 2 precursor 
PCDH17                0.016   protocadherin 17 precursor 
PTPRR                 0.010   protein tyrosine phosphatase, receptor type, R isofor...
PTPRQ                 0.010   protein tyrosine phosphatase, receptor type, Q [Hom...
NIPBL                 0.010   delangin isoform B 
NIPBL                 0.010   delangin isoform A 
GHR                   0.007   growth hormone receptor precursor 
KIRREL3               0.007   kin of IRRE like 3 isoform 2 
MLL2                  0.007   myeloid/lymphoid or mixed-lineage leukemia 2 
LOC729792             0.007   PREDICTED: hypothetical protein 
LOC729792             0.007   PREDICTED: hypothetical protein 
LOC729792             0.007   PREDICTED: hypothetical protein 
LOC100294501          0.007   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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