Guide to the Human Genome
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Name: TMEM64 Sequence: fasta or formatted (380aa) NCBI GI: 223555958
Description:

transmembrane protein 64 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {328aa} transmembrane protein 64 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.3         43           8
 C cysteine            2.9         11           3
 D aspartate           1.3          5           1
 E glutamate           3.7         14           1
 F phenylalanine       3.4         13           1
 G glycine            12.4         47           4
 H histidine           1.6          6           2
 I isoleucine          4.2         16           3
 K lysine              1.6          6           1
 L leucine            15.3         58           3
 M methionine          2.1          8           2
 N asparagine          2.6         10           1
 P proline             4.7         18           2
 Q glutamine           2.4          9           1
 R arginine            5.0         19           2
 S serine              7.6         29           2
 T threonine           3.2         12           2
 V valine             10.5         40           3
 W tryptophan          1.6          6           1
 Y tyrosine            2.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 64 isoform 1 
TMEM64                0.830   transmembrane protein 64 isoform 2 
ADCY5                 0.034   adenylate cyclase 5 
ONECUT3               0.026   one cut homeobox 3 
SAMD11                0.022   sterile alpha motif domain containing 11 
PHOX2B                0.021   paired-like homeobox 2b 
OLIG2                 0.021   oligodendrocyte lineage transcription factor 2 [Homo...
POU3F3                0.021   POU class 3 homeobox 3 
OSBP                  0.019   oxysterol binding protein 
SP3                   0.019   Sp3 transcription factor isoform 1 
JUNB                  0.018   jun B proto-oncogene 
ARID1A                0.018   AT rich interactive domain 1A isoform a 
ARID1A                0.018   AT rich interactive domain 1A isoform b 
EFNB3                 0.018   ephrin-B3 precursor 
POU4F1                0.016   POU domain, class 4, transcription factor 1 
OCA2                  0.016   oculocutaneous albinism II 
MLL4                  0.016   myeloid/lymphoid or mixed-lineage leukemia 4 
LOC100293210          0.015   PREDICTED: hypothetical protein 
LOC100289267          0.015   PREDICTED: hypothetical protein XP_002342177 
ZIC2                  0.015   zinc finger protein of the cerebellum 2 
EVX2                  0.015   even-skipped homeobox 2 
TLX1                  0.015   T-cell leukemia homeobox 1 
MLLT6                 0.015   myeloid/lymphoid or mixed-lineage leukemia (trithora...
GDF11                 0.015   growth differentiation factor 11 precursor 
FUSSEL18              0.015   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.015   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.015   PREDICTED: functional smad suppressing element 18 [...
SNRPB                 0.015   small nuclear ribonucleoprotein polypeptide B/B' iso...
SNRPB                 0.015   small nuclear ribonucleoprotein polypeptide B/B' isof...
SAP30                 0.015   Sin3A-associated protein, 30kDa 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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