PALM2 36374

Name: PALM2	Sequence: fasta or formatted (379aa)		NCBI GI: 82617626
Description: paralemmin 2 isoform b		Referenced in: Synapses
Other entries for this name: alt prot [413aa] paralemmin 2 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 23 2 C cysteine 1.1 4 2 D aspartate 5.3 20 2 E glutamate 14.2 54 4 F phenylalanine 1.3 5 1 G glycine 7.1 27 3 H histidine 2.4 9 1 I isoleucine 5.0 19 2 K lysine 9.8 37 3 L leucine 7.4 28 3 M methionine 2.1 8 1 N asparagine 1.8 7 1 P proline 3.2 12 1 Q glutamine 6.9 26 2 R arginine 4.2 16 3 S serine 7.7 29 2 T threonine 6.1 23 2 V valine 6.9 26 2 W tryptophan 0.3 1 1 Y tyrosine 1.3 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 paralemmin 2 isoform b PALM2 0.975 paralemmin 2 isoform a PALM2-AKAP2 0.317 PALM2-AKAP2 protein isoform 2 PALM2-AKAP2 0.317 PALM2-AKAP2 protein isoform 1 PALM 0.288 paralemmin isoform 1 PALM 0.228 paralemmin isoform 2 PALMD 0.186 palmdelphin PALM3 0.064 hypothetical protein LOC342979 TPM3 0.043 tropomyosin 3 isoform 1 TPM2 0.043 tropomyosin 2 (beta) isoform 1 TPM2 0.041 tropomyosin 2 (beta) isoform 2 MAP7D1 0.035 MAP7 domain containing 1 TPM1 0.035 tropomyosin 1 alpha chain isoform 1 EEA1 0.035 early endosome antigen 1, 162kD CCDC88A 0.034 coiled-coil domain containing 88A isoform 2 BAT2D1 0.032 HBxAg transactivated protein 2 TPM1 0.031 tropomyosin 1 alpha chain isoform 3 CCDC88A 0.031 coiled-coil domain containing 88A isoform 1 TNIK 0.031 TRAF2 and NCK interacting kinase isoform 8 TNIK 0.031 TRAF2 and NCK interacting kinase isoform 7 TNIK 0.029 TRAF2 and NCK interacting kinase isoform 4 TNIK 0.029 TRAF2 and NCK interacting kinase isoform 3 TCHH 0.029 trichohyalin GIGYF2 0.029 GRB10 interacting GYF protein 2 isoform c GIGYF2 0.029 GRB10 interacting GYF protein 2 isoform a GIGYF2 0.029 GRB10 interacting GYF protein 2 isoform b GIGYF2 0.029 GRB10 interacting GYF protein 2 isoform b MYO18A 0.028 myosin 18A isoform b MYO18A 0.028 myosin 18A isoform a RRBP1 0.028 ribosome binding protein 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.