PALM2 36356

Name: PALM2	Sequence: fasta or formatted (413aa)		NCBI GI: 82524851
Description: paralemmin 2 isoform a		Referenced in: Synapses
Other entries for this name: alt prot [379aa] paralemmin 2 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 27 3 C cysteine 1.2 5 2 D aspartate 5.6 23 2 E glutamate 13.3 55 4 F phenylalanine 1.2 5 1 G glycine 7.0 29 3 H histidine 2.2 9 1 I isoleucine 5.1 21 2 K lysine 9.0 37 3 L leucine 7.5 31 3 M methionine 1.9 8 1 N asparagine 1.9 8 1 P proline 3.9 16 1 Q glutamine 6.8 28 2 R arginine 4.4 18 3 S serine 8.2 34 2 T threonine 6.1 25 2 V valine 6.5 27 2 W tryptophan 0.2 1 1 Y tyrosine 1.5 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 paralemmin 2 isoform a PALM2 0.891 paralemmin 2 isoform b PALM2-AKAP2 0.384 PALM2-AKAP2 protein isoform 2 PALM2-AKAP2 0.384 PALM2-AKAP2 protein isoform 1 PALM 0.271 paralemmin isoform 1 PALM 0.202 paralemmin isoform 2 PALMD 0.194 palmdelphin PALM3 0.059 hypothetical protein LOC342979 RRBP1 0.036 ribosome binding protein 1 RRBP1 0.036 ribosome binding protein 1 CCDC88A 0.031 coiled-coil domain containing 88A isoform 2 TNIK 0.028 TRAF2 and NCK interacting kinase isoform 8 TNIK 0.028 TRAF2 and NCK interacting kinase isoform 7 MAP7D1 0.028 MAP7 domain containing 1 TCHH 0.027 trichohyalin CCDC88A 0.027 coiled-coil domain containing 88A isoform 1 BAT2D1 0.027 HBxAg transactivated protein 2 PLEC1 0.024 plectin 1 isoform 11 PLEC1 0.024 plectin 1 isoform 10 PLEC1 0.024 plectin 1 isoform 8 PLEC1 0.024 plectin 1 isoform 7 PLEC1 0.024 plectin 1 isoform 6 PLEC1 0.024 plectin 1 isoform 3 PLEC1 0.024 plectin 1 isoform 2 PLEC1 0.024 plectin 1 isoform 1 DSP 0.024 desmoplakin isoform I C14orf145 0.024 hypothetical protein LOC145508 PPL 0.024 periplakin GIGYF2 0.023 GRB10 interacting GYF protein 2 isoform c GIGYF2 0.023 GRB10 interacting GYF protein 2 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.