PALMD 36995

Name: PALMD	Sequence: fasta or formatted (551aa)		NCBI GI: 8923243
Description: palmdelphin		Referenced in: Synapses
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 26 2 C cysteine 0.2 1 1 D aspartate 5.6 31 2 E glutamate 13.1 72 4 F phenylalanine 1.5 8 1 G glycine 4.5 25 1 H histidine 3.4 19 2 I isoleucine 6.9 38 2 K lysine 9.1 50 3 L leucine 6.9 38 2 M methionine 1.8 10 1 N asparagine 4.2 23 2 P proline 7.3 40 2 Q glutamine 5.6 31 2 R arginine 4.9 27 1 S serine 8.0 44 2 T threonine 4.9 27 2 V valine 4.5 25 2 W tryptophan 0.4 2 1 Y tyrosine 2.5 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 palmdelphin PALM2 0.141 paralemmin 2 isoform a PALM2 0.123 paralemmin 2 isoform b PALM 0.096 paralemmin isoform 1 PALM2-AKAP2 0.088 PALM2-AKAP2 protein isoform 2 PALM2-AKAP2 0.088 PALM2-AKAP2 protein isoform 1 PALM 0.060 paralemmin isoform 2 PALM3 0.045 hypothetical protein LOC342979 TRDN 0.030 triadin TNIK 0.026 TRAF2 and NCK interacting kinase isoform 2 TNIK 0.026 TRAF2 and NCK interacting kinase isoform 1 TCHH 0.024 trichohyalin GOLGA6B 0.023 golgi autoantigen, golgin subfamily a, 6B NEXN 0.022 nexilin (F actin binding protein) GOLGA6D 0.022 golgi autoantigen, golgin subfamily a, 6D GOLGA6C 0.022 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... MYH10 0.022 myosin, heavy polypeptide 10, non-muscle GOLGA6 0.022 golgi autoantigen, golgin subfamily a, 6 RAD50 0.021 RAD50 homolog isoform 2 RAD50 0.021 RAD50 homolog isoform 1 MAP7D2 0.021 MAP7 domain containing 2 TNIK 0.021 TRAF2 and NCK interacting kinase isoform 6 TNIK 0.021 TRAF2 and NCK interacting kinase isoform 5 MYO18A 0.020 myosin 18A isoform b MYO18A 0.020 myosin 18A isoform a INCENP 0.020 inner centromere protein antigens 135/155kDa isofor... INCENP 0.020 inner centromere protein antigens 135/155kDa isofor... ERC1 0.020 RAB6-interacting protein 2 isoform epsilon ERC1 0.020 RAB6-interacting protein 2 isoform delta EVPL 0.020 envoplakin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.