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Search of human proteins with 115298661
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|115298661 SCL/TAL1 interrupting locus isoform 2 [Homo
sapiens]
(1287 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|115298661 SCL/TAL1 interrupting locus isoform 2 [Homo sapiens] 2616 0.0
gi|115298663 SCL/TAL1 interrupting locus isoform 1 [Homo sapiens] 2612 0.0
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 51 6e-06
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 51 6e-06
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 51 6e-06
gi|125858485 hypothetical protein LOC80209 isoform 2 [Homo sapiens] 41 0.008
gi|125656155 hypothetical protein LOC80209 isoform 1 [Homo sapiens] 41 0.008
gi|54792138 helicase with zinc finger domain [Homo sapiens] 39 0.025
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens] 39 0.025
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 37 0.093
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 37 0.093
gi|226817313 SH3 and multiple ankyrin repeat domains 2 isoform 1... 37 0.12
gi|64085167 SH2 containing inositol phosphatase isoform a [Homo ... 36 0.21
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 36 0.27
gi|40254823 SH2 containing inositol phosphatase isoform b [Homo ... 35 0.46
gi|76563940 synuclein alpha interacting protein [Homo sapiens] 35 0.60
gi|21359951 RNA binding motif protein 42 [Homo sapiens] 35 0.60
gi|194440673 THAP domain containing 5 isoform 2 [Homo sapiens] 35 0.60
gi|194440668 THAP domain containing 5 isoform 1 [Homo sapiens] 35 0.60
gi|54607116 leiomodin 3 (fetal) [Homo sapiens] 35 0.60
gi|46370082 transcription factor 12 isoform a [Homo sapiens] 34 0.79
gi|46370080 transcription factor 12 isoform a [Homo sapiens] 34 0.79
gi|148612879 polyhomeotic like 3 [Homo sapiens] 34 1.0
gi|13129016 DET1 and DDB1 associated 1 [Homo sapiens] 33 1.3
gi|6005824 Sec23-interacting protein p125 [Homo sapiens] 33 1.3
gi|23397666 transcriptional co-repressor Sin3A [Homo sapiens] 33 1.8
gi|223941785 transcriptional co-repressor Sin3A [Homo sapiens] 33 1.8
gi|223941782 transcriptional co-repressor Sin3A [Homo sapiens] 33 1.8
gi|236459851 ubinuclein 2 [Homo sapiens] 33 1.8
gi|239754590 PREDICTED: similar to hCG1779533 [Homo sapiens] 33 1.8
>gi|115298661 SCL/TAL1 interrupting locus isoform 2 [Homo sapiens]
Length = 1287
Score = 2616 bits (6781), Expect = 0.0
Identities = 1287/1287 (100%), Positives = 1287/1287 (100%)
Query: 1 MEPIYPFARPQMNTRFPSSRMVPFHFPPSKCALWNPTPTGDFIYLHLSYYRNPKLVVTEK 60
MEPIYPFARPQMNTRFPSSRMVPFHFPPSKCALWNPTPTGDFIYLHLSYYRNPKLVVTEK
Sbjct: 1 MEPIYPFARPQMNTRFPSSRMVPFHFPPSKCALWNPTPTGDFIYLHLSYYRNPKLVVTEK 60
Query: 61 TIRLAYRHAKQNKKNSSCFLLGSLTADEDEEGVTLTVDRFDPGREVPECLEITPTASLPG 120
TIRLAYRHAKQNKKNSSCFLLGSLTADEDEEGVTLTVDRFDPGREVPECLEITPTASLPG
Sbjct: 61 TIRLAYRHAKQNKKNSSCFLLGSLTADEDEEGVTLTVDRFDPGREVPECLEITPTASLPG 120
Query: 121 DFLIPCKVHTQELCSREMIVHSVDDFSSALKALQCHICSKDSLDCGKLLSLRVHITSRES 180
DFLIPCKVHTQELCSREMIVHSVDDFSSALKALQCHICSKDSLDCGKLLSLRVHITSRES
Sbjct: 121 DFLIPCKVHTQELCSREMIVHSVDDFSSALKALQCHICSKDSLDCGKLLSLRVHITSRES 180
Query: 181 LDSVEFDLHWAAVTLANNFKCTPVKPIPIIPTALARNLSSNLNISQVQGTYKYGYLTMDE 240
LDSVEFDLHWAAVTLANNFKCTPVKPIPIIPTALARNLSSNLNISQVQGTYKYGYLTMDE
Sbjct: 181 LDSVEFDLHWAAVTLANNFKCTPVKPIPIIPTALARNLSSNLNISQVQGTYKYGYLTMDE 240
Query: 241 TRKLLLLLESDPKVYSLPLVGIWLSGITHIYSPQVWACCLRYIFNSSVQERVFSESGNFI 300
TRKLLLLLESDPKVYSLPLVGIWLSGITHIYSPQVWACCLRYIFNSSVQERVFSESGNFI
Sbjct: 241 TRKLLLLLESDPKVYSLPLVGIWLSGITHIYSPQVWACCLRYIFNSSVQERVFSESGNFI 300
Query: 301 IVLYSMTHKEPEFYECFPCDGKIPDFRFQLLTSKETLHLFKNVEPPDKNPIRCELSAESQ 360
IVLYSMTHKEPEFYECFPCDGKIPDFRFQLLTSKETLHLFKNVEPPDKNPIRCELSAESQ
Sbjct: 301 IVLYSMTHKEPEFYECFPCDGKIPDFRFQLLTSKETLHLFKNVEPPDKNPIRCELSAESQ 360
Query: 361 NAETEFFSKASKNFSIKRSSQKLSSGKMPIHDHDSGVEDEDFSPRPIPSPHPVSQKISKI 420
NAETEFFSKASKNFSIKRSSQKLSSGKMPIHDHDSGVEDEDFSPRPIPSPHPVSQKISKI
Sbjct: 361 NAETEFFSKASKNFSIKRSSQKLSSGKMPIHDHDSGVEDEDFSPRPIPSPHPVSQKISKI 420
Query: 421 QPSVPELSLVLDGNFIESNPLPTPLEMVNNENPPLINHLEHLKPLQPQLYDEKHSPEVEA 480
QPSVPELSLVLDGNFIESNPLPTPLEMVNNENPPLINHLEHLKPLQPQLYDEKHSPEVEA
Sbjct: 421 QPSVPELSLVLDGNFIESNPLPTPLEMVNNENPPLINHLEHLKPLQPQLYDEKHSPEVEA 480
Query: 481 GEPSLRGIPNQLNQDKPALLRHCKVRQPPAYKKGNPHTRNSIKPSSHNGPSHDIFEKLQT 540
GEPSLRGIPNQLNQDKPALLRHCKVRQPPAYKKGNPHTRNSIKPSSHNGPSHDIFEKLQT
Sbjct: 481 GEPSLRGIPNQLNQDKPALLRHCKVRQPPAYKKGNPHTRNSIKPSSHNGPSHDIFEKLQT 540
Query: 541 VSAGNVQNEEYPIRPSTLNSRQSSLAPQSQPHDFVFSPHNSGRPMELQIPTPPLPSYCST 600
VSAGNVQNEEYPIRPSTLNSRQSSLAPQSQPHDFVFSPHNSGRPMELQIPTPPLPSYCST
Sbjct: 541 VSAGNVQNEEYPIRPSTLNSRQSSLAPQSQPHDFVFSPHNSGRPMELQIPTPPLPSYCST 600
Query: 601 NVCRCCQHHSHIQYSPLNSWQGANTVGSIQDVQSEALQKHSLFHPSGCPALYCNAFCSSS 660
NVCRCCQHHSHIQYSPLNSWQGANTVGSIQDVQSEALQKHSLFHPSGCPALYCNAFCSSS
Sbjct: 601 NVCRCCQHHSHIQYSPLNSWQGANTVGSIQDVQSEALQKHSLFHPSGCPALYCNAFCSSS 660
Query: 661 SPIALRPQGDMGSCSPHSNIEPSPVARPPSHMDLCNPQPCTVCMHTPKTESDNGMMGLSP 720
SPIALRPQGDMGSCSPHSNIEPSPVARPPSHMDLCNPQPCTVCMHTPKTESDNGMMGLSP
Sbjct: 661 SPIALRPQGDMGSCSPHSNIEPSPVARPPSHMDLCNPQPCTVCMHTPKTESDNGMMGLSP 720
Query: 721 DAYRFLTEQDRQLRLLQAQIQRLLEAQSLMPCSPKTTAVEDTVQAGRQMELVSVEAQSSP 780
DAYRFLTEQDRQLRLLQAQIQRLLEAQSLMPCSPKTTAVEDTVQAGRQMELVSVEAQSSP
Sbjct: 721 DAYRFLTEQDRQLRLLQAQIQRLLEAQSLMPCSPKTTAVEDTVQAGRQMELVSVEAQSSP 780
Query: 781 GLHMRKGVSIAVSTGASLFWNAAGEDQEPDSQMKQDDTKISSEDMNFSVDINNEVTSLPG 840
GLHMRKGVSIAVSTGASLFWNAAGEDQEPDSQMKQDDTKISSEDMNFSVDINNEVTSLPG
Sbjct: 781 GLHMRKGVSIAVSTGASLFWNAAGEDQEPDSQMKQDDTKISSEDMNFSVDINNEVTSLPG 840
Query: 841 SASSLKAVDIPSFEESNIAVEEEFNQPLSVSNSSLVVRKEPDVPVFFPSGQLAESVSMCL 900
SASSLKAVDIPSFEESNIAVEEEFNQPLSVSNSSLVVRKEPDVPVFFPSGQLAESVSMCL
Sbjct: 841 SASSLKAVDIPSFEESNIAVEEEFNQPLSVSNSSLVVRKEPDVPVFFPSGQLAESVSMCL 900
Query: 901 QTGPTGGASNNSETSEEPKIEHVMQPLLHQPSDNQKIYQDLLGQVNHLLNSSSKETEQPS 960
QTGPTGGASNNSETSEEPKIEHVMQPLLHQPSDNQKIYQDLLGQVNHLLNSSSKETEQPS
Sbjct: 901 QTGPTGGASNNSETSEEPKIEHVMQPLLHQPSDNQKIYQDLLGQVNHLLNSSSKETEQPS 960
Query: 961 TKAVIISHECTRTQNVYHTKKKTHHSRLVDKDCVLNATLKQLRSLGVKIDSPTKVKKNAH 1020
TKAVIISHECTRTQNVYHTKKKTHHSRLVDKDCVLNATLKQLRSLGVKIDSPTKVKKNAH
Sbjct: 961 TKAVIISHECTRTQNVYHTKKKTHHSRLVDKDCVLNATLKQLRSLGVKIDSPTKVKKNAH 1020
Query: 1021 NVDHASVLACISPEAVISGLNCMSFANVGMSGLSPNGVDLSMEANAIALKYLNENQLSQL 1080
NVDHASVLACISPEAVISGLNCMSFANVGMSGLSPNGVDLSMEANAIALKYLNENQLSQL
Sbjct: 1021 NVDHASVLACISPEAVISGLNCMSFANVGMSGLSPNGVDLSMEANAIALKYLNENQLSQL 1080
Query: 1081 SVTRSNQNNCDPFSLLHINTDRSTVGLSLISPNNMSFATKKYMKRYGLLQSSDNSEDEEE 1140
SVTRSNQNNCDPFSLLHINTDRSTVGLSLISPNNMSFATKKYMKRYGLLQSSDNSEDEEE
Sbjct: 1081 SVTRSNQNNCDPFSLLHINTDRSTVGLSLISPNNMSFATKKYMKRYGLLQSSDNSEDEEE 1140
Query: 1141 PPDNADSKSEYLLNQNLRSIPEQLGGQKEPSKNDHEIINCSNCESVGTNADTPVLRNITN 1200
PPDNADSKSEYLLNQNLRSIPEQLGGQKEPSKNDHEIINCSNCESVGTNADTPVLRNITN
Sbjct: 1141 PPDNADSKSEYLLNQNLRSIPEQLGGQKEPSKNDHEIINCSNCESVGTNADTPVLRNITN 1200
Query: 1201 EVLQTKAKQQLTEKPAFLVKNLKPSPAVNLRTGKAEFTQHPEKENEGDITIFPESLQPSE 1260
EVLQTKAKQQLTEKPAFLVKNLKPSPAVNLRTGKAEFTQHPEKENEGDITIFPESLQPSE
Sbjct: 1201 EVLQTKAKQQLTEKPAFLVKNLKPSPAVNLRTGKAEFTQHPEKENEGDITIFPESLQPSE 1260
Query: 1261 TLKQMNSMNSVGTFLDVKRLRQLPKLF 1287
TLKQMNSMNSVGTFLDVKRLRQLPKLF
Sbjct: 1261 TLKQMNSMNSVGTFLDVKRLRQLPKLF 1287
>gi|115298663 SCL/TAL1 interrupting locus isoform 1 [Homo sapiens]
Length = 1288
Score = 2612 bits (6769), Expect = 0.0
Identities = 1287/1288 (99%), Positives = 1287/1288 (99%), Gaps = 1/1288 (0%)
Query: 1 MEPIYPFARPQMNTRFPSSRMVPFHFPPSKCALWNPTPTGDFIYLHLSYYRNPKLVVTEK 60
MEPIYPFARPQMNTRFPSSRMVPFHFPPSKCALWNPTPTGDFIYLHLSYYRNPKLVVTEK
Sbjct: 1 MEPIYPFARPQMNTRFPSSRMVPFHFPPSKCALWNPTPTGDFIYLHLSYYRNPKLVVTEK 60
Query: 61 TIRLAYRHAKQNKKNSSCFLLGSLTADEDEEGVTLTVDRFDPGREVPECLEITPTASLPG 120
TIRLAYRHAKQNKKNSSCFLLGSLTADEDEEGVTLTVDRFDPGREVPECLEITPTASLPG
Sbjct: 61 TIRLAYRHAKQNKKNSSCFLLGSLTADEDEEGVTLTVDRFDPGREVPECLEITPTASLPG 120
Query: 121 DFLIPCKVHTQELCSREMIVHSVDDFSSALKALQCHICSKDSLDCGKLLSLRVHITSRES 180
DFLIPCKVHTQELCSREMIVHSVDDFSSALKALQCHICSKDSLDCGKLLSLRVHITSRES
Sbjct: 121 DFLIPCKVHTQELCSREMIVHSVDDFSSALKALQCHICSKDSLDCGKLLSLRVHITSRES 180
Query: 181 LDSVEFDLHWAAVTLANNFKCTPVKPIPIIPTALARNLSSNLNISQVQGTYKYGYLTMDE 240
LDSVEFDLHWAAVTLANNFKCTPVKPIPIIPTALARNLSSNLNISQVQGTYKYGYLTMDE
Sbjct: 181 LDSVEFDLHWAAVTLANNFKCTPVKPIPIIPTALARNLSSNLNISQVQGTYKYGYLTMDE 240
Query: 241 TRKLLLLLESDPKVYSLPLVGIWLSGITHIYSPQVWACCLRYIFNSSVQERVFSESGNFI 300
TRKLLLLLESDPKVYSLPLVGIWLSGITHIYSPQVWACCLRYIFNSSVQERVFSESGNFI
Sbjct: 241 TRKLLLLLESDPKVYSLPLVGIWLSGITHIYSPQVWACCLRYIFNSSVQERVFSESGNFI 300
Query: 301 IVLYSMTHKEPEFYECFPCDGKIPDFRFQLLTSKETLHLFKNVEPPDKNPIRCELSAESQ 360
IVLYSMTHKEPEFYECFPCDGKIPDFRFQLLTSKETLHLFKNVEPPDKNPIRCELSAESQ
Sbjct: 301 IVLYSMTHKEPEFYECFPCDGKIPDFRFQLLTSKETLHLFKNVEPPDKNPIRCELSAESQ 360
Query: 361 NAETEFFSKASKNFSIKRSSQKLSSGKMPIHDHDSGVEDEDFSPRPIPSPHPVSQKISKI 420
NAETEFFSKASKNFSIKRSSQKLSSGKMPIHDHDSGVEDEDFSPRPIPSPHPVSQKISKI
Sbjct: 361 NAETEFFSKASKNFSIKRSSQKLSSGKMPIHDHDSGVEDEDFSPRPIPSPHPVSQKISKI 420
Query: 421 QPSVPELSLVLDGNFIESNPLPTPLEMVNNENPPLINHLEHLKPLQPQLYDEKHSPEVEA 480
QPSVPELSLVLDGNFIESNPLPTPLEMVNNENPPLINHLEHLKPLQPQLYDEKHSPEVEA
Sbjct: 421 QPSVPELSLVLDGNFIESNPLPTPLEMVNNENPPLINHLEHLKPLQPQLYDEKHSPEVEA 480
Query: 481 GEPSLRGIPNQLNQDKPALLRHCKVRQPPAYKKGNPHTRNSIKPSSHNGPSHDIFEKLQT 540
GEPSLRGIPNQLNQDKPALLRHCKVRQPPAYKKGNPHTRNSIKPSSHNGPSHDIFEKLQT
Sbjct: 481 GEPSLRGIPNQLNQDKPALLRHCKVRQPPAYKKGNPHTRNSIKPSSHNGPSHDIFEKLQT 540
Query: 541 VSAGNVQNEEYPIRPSTLNSRQSSLAPQSQPHDFVFSPHNSGRPMELQIPTPPLPSYCST 600
VSAGNVQNEEYPIRPSTLNSRQSSLAPQSQPHDFVFSPHNSGRPMELQIPTPPLPSYCST
Sbjct: 541 VSAGNVQNEEYPIRPSTLNSRQSSLAPQSQPHDFVFSPHNSGRPMELQIPTPPLPSYCST 600
Query: 601 NVCRCCQHHSHIQYSPLNSWQGANTVGSIQDVQSEALQKHSLFHPSGCPALYCNAFCSSS 660
NVCRCCQHHSHIQYSPLNSWQGANTVGSIQDVQSEALQKHSLFHPSGCPALYCNAFCSSS
Sbjct: 601 NVCRCCQHHSHIQYSPLNSWQGANTVGSIQDVQSEALQKHSLFHPSGCPALYCNAFCSSS 660
Query: 661 SPIALRPQGDMGSCSPHSNIEPSPVARPPSHMDLCNPQPCTVCMHTPKTESDNGMMGLSP 720
SPIALRPQGDMGSCSPHSNIEPSPVARPPSHMDLCNPQPCTVCMHTPKTESDNGMMGLSP
Sbjct: 661 SPIALRPQGDMGSCSPHSNIEPSPVARPPSHMDLCNPQPCTVCMHTPKTESDNGMMGLSP 720
Query: 721 DAYRFLTEQDRQLRLLQAQIQRLLEAQSLMPCSPKTTAVEDTVQAGRQMELVSVEAQSSP 780
DAYRFLTEQDRQLRLLQAQIQRLLEAQSLMPCSPKTTAVEDTVQAGRQMELVSVEAQSSP
Sbjct: 721 DAYRFLTEQDRQLRLLQAQIQRLLEAQSLMPCSPKTTAVEDTVQAGRQMELVSVEAQSSP 780
Query: 781 GLHMRKGVSIAVSTGASLFWNAAGEDQEPDSQMKQDDTKISSEDMNFSVDINNEVTSLPG 840
GLHMRKGVSIAVSTGASLFWNAAGEDQEPDSQMKQDDTKISSEDMNFSVDINNEVTSLPG
Sbjct: 781 GLHMRKGVSIAVSTGASLFWNAAGEDQEPDSQMKQDDTKISSEDMNFSVDINNEVTSLPG 840
Query: 841 SASSLKAVDIPSFEESNIAVEEEFNQPLSVSN-SSLVVRKEPDVPVFFPSGQLAESVSMC 899
SASSLKAVDIPSFEESNIAVEEEFNQPLSVSN SSLVVRKEPDVPVFFPSGQLAESVSMC
Sbjct: 841 SASSLKAVDIPSFEESNIAVEEEFNQPLSVSNSSSLVVRKEPDVPVFFPSGQLAESVSMC 900
Query: 900 LQTGPTGGASNNSETSEEPKIEHVMQPLLHQPSDNQKIYQDLLGQVNHLLNSSSKETEQP 959
LQTGPTGGASNNSETSEEPKIEHVMQPLLHQPSDNQKIYQDLLGQVNHLLNSSSKETEQP
Sbjct: 901 LQTGPTGGASNNSETSEEPKIEHVMQPLLHQPSDNQKIYQDLLGQVNHLLNSSSKETEQP 960
Query: 960 STKAVIISHECTRTQNVYHTKKKTHHSRLVDKDCVLNATLKQLRSLGVKIDSPTKVKKNA 1019
STKAVIISHECTRTQNVYHTKKKTHHSRLVDKDCVLNATLKQLRSLGVKIDSPTKVKKNA
Sbjct: 961 STKAVIISHECTRTQNVYHTKKKTHHSRLVDKDCVLNATLKQLRSLGVKIDSPTKVKKNA 1020
Query: 1020 HNVDHASVLACISPEAVISGLNCMSFANVGMSGLSPNGVDLSMEANAIALKYLNENQLSQ 1079
HNVDHASVLACISPEAVISGLNCMSFANVGMSGLSPNGVDLSMEANAIALKYLNENQLSQ
Sbjct: 1021 HNVDHASVLACISPEAVISGLNCMSFANVGMSGLSPNGVDLSMEANAIALKYLNENQLSQ 1080
Query: 1080 LSVTRSNQNNCDPFSLLHINTDRSTVGLSLISPNNMSFATKKYMKRYGLLQSSDNSEDEE 1139
LSVTRSNQNNCDPFSLLHINTDRSTVGLSLISPNNMSFATKKYMKRYGLLQSSDNSEDEE
Sbjct: 1081 LSVTRSNQNNCDPFSLLHINTDRSTVGLSLISPNNMSFATKKYMKRYGLLQSSDNSEDEE 1140
Query: 1140 EPPDNADSKSEYLLNQNLRSIPEQLGGQKEPSKNDHEIINCSNCESVGTNADTPVLRNIT 1199
EPPDNADSKSEYLLNQNLRSIPEQLGGQKEPSKNDHEIINCSNCESVGTNADTPVLRNIT
Sbjct: 1141 EPPDNADSKSEYLLNQNLRSIPEQLGGQKEPSKNDHEIINCSNCESVGTNADTPVLRNIT 1200
Query: 1200 NEVLQTKAKQQLTEKPAFLVKNLKPSPAVNLRTGKAEFTQHPEKENEGDITIFPESLQPS 1259
NEVLQTKAKQQLTEKPAFLVKNLKPSPAVNLRTGKAEFTQHPEKENEGDITIFPESLQPS
Sbjct: 1201 NEVLQTKAKQQLTEKPAFLVKNLKPSPAVNLRTGKAEFTQHPEKENEGDITIFPESLQPS 1260
Query: 1260 ETLKQMNSMNSVGTFLDVKRLRQLPKLF 1287
ETLKQMNSMNSVGTFLDVKRLRQLPKLF
Sbjct: 1261 ETLKQMNSMNSVGTFLDVKRLRQLPKLF 1288
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 51.2 bits (121), Expect = 6e-06
Identities = 71/324 (21%), Positives = 110/324 (33%), Gaps = 31/324 (9%)
Query: 392 DHDSGVEDEDFSPRP--IPSPHPVSQKISKIQPSVPELSL---VLDGNFIESNPLPTPLE 446
D DS + + +P + +P V+ S P P+L + PT +
Sbjct: 170 DSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQ 229
Query: 447 MVNNENPPLI----NHLEHLKPLQPQLYDEKHSPEVEAGEPSLRGIPNQLNQDKPALLRH 502
N P H++ L PQ H P + P L+ + Q P+ H
Sbjct: 230 APNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQ--PSAPSH 287
Query: 503 CKVRQPPAYKKG--NPHTRNSIKPSSHNGPSHDIFEKLQTVSA----GNVQNEEYPIRPS 556
QPP + +G PH+ + H GP Q G YP
Sbjct: 288 A---QPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSL 344
Query: 557 TLNSRQSSLAPQSQPHDFVFSPHNSGRPMELQIPTPPLPSYCSTNVCRCCQHHSHIQ-YS 615
L + QS+L Q P + P P PT P+P + + +H H+ S
Sbjct: 345 QLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAP---QAHKHPPHLSGPS 401
Query: 616 PLNSWQGANTVGSIQDVQSEALQKHSLFHPSGCPALYCNAFCSSSSPIALRPQGDMGSCS 675
P + +++ + S + HP P L S P+ P G +
Sbjct: 402 PFSMNANLPPPPALKPLSSLSTHHPPSAHP---PPL---QLMPQSQPLPSSPAQPPG-LT 454
Query: 676 PHSNIEPSPVARPPSHMDLCNPQP 699
N+ P P + PP+ + PQP
Sbjct: 455 QSQNLPPPPASHPPTGLHQVAPQP 478
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 51.2 bits (121), Expect = 6e-06
Identities = 71/324 (21%), Positives = 110/324 (33%), Gaps = 31/324 (9%)
Query: 392 DHDSGVEDEDFSPRP--IPSPHPVSQKISKIQPSVPELSL---VLDGNFIESNPLPTPLE 446
D DS + + +P + +P V+ S P P+L + PT +
Sbjct: 724 DSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQ 783
Query: 447 MVNNENPPLI----NHLEHLKPLQPQLYDEKHSPEVEAGEPSLRGIPNQLNQDKPALLRH 502
N P H++ L PQ H P + P L+ + Q P+ H
Sbjct: 784 APNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQ--PSAPSH 841
Query: 503 CKVRQPPAYKKG--NPHTRNSIKPSSHNGPSHDIFEKLQTVSA----GNVQNEEYPIRPS 556
QPP + +G PH+ + H GP Q G YP
Sbjct: 842 A---QPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSL 898
Query: 557 TLNSRQSSLAPQSQPHDFVFSPHNSGRPMELQIPTPPLPSYCSTNVCRCCQHHSHIQ-YS 615
L + QS+L Q P + P P PT P+P + + +H H+ S
Sbjct: 899 QLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAP---QAHKHPPHLSGPS 955
Query: 616 PLNSWQGANTVGSIQDVQSEALQKHSLFHPSGCPALYCNAFCSSSSPIALRPQGDMGSCS 675
P + +++ + S + HP P L S P+ P G +
Sbjct: 956 PFSMNANLPPPPALKPLSSLSTHHPPSAHP---PPL---QLMPQSQPLPSSPAQPPG-LT 1008
Query: 676 PHSNIEPSPVARPPSHMDLCNPQP 699
N+ P P + PP+ + PQP
Sbjct: 1009 QSQNLPPPPASHPPTGLHQVAPQP 1032
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 51.2 bits (121), Expect = 6e-06
Identities = 71/324 (21%), Positives = 110/324 (33%), Gaps = 31/324 (9%)
Query: 392 DHDSGVEDEDFSPRP--IPSPHPVSQKISKIQPSVPELSL---VLDGNFIESNPLPTPLE 446
D DS + + +P + +P V+ S P P+L + PT +
Sbjct: 724 DSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQ 783
Query: 447 MVNNENPPLI----NHLEHLKPLQPQLYDEKHSPEVEAGEPSLRGIPNQLNQDKPALLRH 502
N P H++ L PQ H P + P L+ + Q P+ H
Sbjct: 784 APNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQ--PSAPSH 841
Query: 503 CKVRQPPAYKKG--NPHTRNSIKPSSHNGPSHDIFEKLQTVSA----GNVQNEEYPIRPS 556
QPP + +G PH+ + H GP Q G YP
Sbjct: 842 A---QPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSL 898
Query: 557 TLNSRQSSLAPQSQPHDFVFSPHNSGRPMELQIPTPPLPSYCSTNVCRCCQHHSHIQ-YS 615
L + QS+L Q P + P P PT P+P + + +H H+ S
Sbjct: 899 QLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAP---QAHKHPPHLSGPS 955
Query: 616 PLNSWQGANTVGSIQDVQSEALQKHSLFHPSGCPALYCNAFCSSSSPIALRPQGDMGSCS 675
P + +++ + S + HP P L S P+ P G +
Sbjct: 956 PFSMNANLPPPPALKPLSSLSTHHPPSAHP---PPL---QLMPQSQPLPSSPAQPPG-LT 1008
Query: 676 PHSNIEPSPVARPPSHMDLCNPQP 699
N+ P P + PP+ + PQP
Sbjct: 1009 QSQNLPPPPASHPPTGLHQVAPQP 1032
>gi|125858485 hypothetical protein LOC80209 isoform 2 [Homo sapiens]
Length = 922
Score = 40.8 bits (94), Expect = 0.008
Identities = 87/408 (21%), Positives = 135/408 (33%), Gaps = 69/408 (16%)
Query: 405 RPIPSPHPVSQKISKIQPSV-PELSLVLDGNFIESNPLPTPLEMVNNENPPLINHLEHLK 463
+P+P P P + + I PS LV N I P P V EN L N K
Sbjct: 175 KPVPYPIPPCRPHATIAPSAYNNAGLVPLANVIAPPPPPYTPNPVGTENEDLSNPS---K 231
Query: 464 PLQPQLYDEKHSPEVEAGEPSLRGIPNQLNQDKPALLRHCKVRQPPAYKKGNPHTRNSIK 523
P+Q Q + PA + +PH N
Sbjct: 232 PIQNQTFST------------------------------------PASQLFSPHGSNPST 255
Query: 524 PSSHNGPS--------HDIFEKLQTVSAGNVQNEEYPIRPSTLNSRQSSLAPQSQPHDFV 575
P++ P+ H TVS N+ N P+ P ++S + P +
Sbjct: 256 PAATPVPTASPVKAINHPSASAAATVSGMNLLNTVLPVFPGQVSSAVHTPQPSIPNPTVI 315
Query: 576 FSPHNSGRPMEL--QIPTPPLPSYCSTNVCRCCQHHSHIQYSPLNSWQGANTVGSIQDVQ 633
+P P+ T P+PS S V + +P +T+GS +
Sbjct: 316 RTPSLPTAPVTSIHSTTTTPVPSIFSGLVSLPGPSATPTAATPTPGPTPRSTLGSSEAFA 375
Query: 634 SEALQKHSLFHPSGCPALYCNAFCSSSSPIALRPQGDMGSCSPHSNIEPSPVARPPSHMD 693
S + SL P ++ S+S+P S S S P+ PP+
Sbjct: 376 STSAPFTSL------PFSTSSSAASTSNP---------NSASLSSVFAGLPLPLPPTSQG 420
Query: 694 LCNPQPCTVCMHTPKTESDNGMMGLSPDAYR-FLTEQDRQL---RLLQAQIQRLLEAQSL 749
L NP P TP G+ A + FLT D L L + + L + S
Sbjct: 421 LSNPTPVIAGGSTPSVAGPLGVNSPLLSALKGFLTSNDTNLINSSALSSAVTSGLASLSS 480
Query: 750 MPCSPKTTAVEDTVQAGRQMELVSVEAQSSPGLHMRKGVSIAVSTGAS 797
+ ++ + + + + S+PGL + G+ V+ S
Sbjct: 481 LTLQNSDSSASAPNKCYAPSAIPTPQRTSTPGLALFPGLPSPVANSTS 528
>gi|125656155 hypothetical protein LOC80209 isoform 1 [Homo sapiens]
Length = 944
Score = 40.8 bits (94), Expect = 0.008
Identities = 87/408 (21%), Positives = 135/408 (33%), Gaps = 69/408 (16%)
Query: 405 RPIPSPHPVSQKISKIQPSV-PELSLVLDGNFIESNPLPTPLEMVNNENPPLINHLEHLK 463
+P+P P P + + I PS LV N I P P V EN L N K
Sbjct: 197 KPVPYPIPPCRPHATIAPSAYNNAGLVPLANVIAPPPPPYTPNPVGTENEDLSNPS---K 253
Query: 464 PLQPQLYDEKHSPEVEAGEPSLRGIPNQLNQDKPALLRHCKVRQPPAYKKGNPHTRNSIK 523
P+Q Q + PA + +PH N
Sbjct: 254 PIQNQTFST------------------------------------PASQLFSPHGSNPST 277
Query: 524 PSSHNGPS--------HDIFEKLQTVSAGNVQNEEYPIRPSTLNSRQSSLAPQSQPHDFV 575
P++ P+ H TVS N+ N P+ P ++S + P +
Sbjct: 278 PAATPVPTASPVKAINHPSASAAATVSGMNLLNTVLPVFPGQVSSAVHTPQPSIPNPTVI 337
Query: 576 FSPHNSGRPMEL--QIPTPPLPSYCSTNVCRCCQHHSHIQYSPLNSWQGANTVGSIQDVQ 633
+P P+ T P+PS S V + +P +T+GS +
Sbjct: 338 RTPSLPTAPVTSIHSTTTTPVPSIFSGLVSLPGPSATPTAATPTPGPTPRSTLGSSEAFA 397
Query: 634 SEALQKHSLFHPSGCPALYCNAFCSSSSPIALRPQGDMGSCSPHSNIEPSPVARPPSHMD 693
S + SL P ++ S+S+P S S S P+ PP+
Sbjct: 398 STSAPFTSL------PFSTSSSAASTSNP---------NSASLSSVFAGLPLPLPPTSQG 442
Query: 694 LCNPQPCTVCMHTPKTESDNGMMGLSPDAYR-FLTEQDRQL---RLLQAQIQRLLEAQSL 749
L NP P TP G+ A + FLT D L L + + L + S
Sbjct: 443 LSNPTPVIAGGSTPSVAGPLGVNSPLLSALKGFLTSNDTNLINSSALSSAVTSGLASLSS 502
Query: 750 MPCSPKTTAVEDTVQAGRQMELVSVEAQSSPGLHMRKGVSIAVSTGAS 797
+ ++ + + + + S+PGL + G+ V+ S
Sbjct: 503 LTLQNSDSSASAPNKCYAPSAIPTPQRTSTPGLALFPGLPSPVANSTS 550
>gi|54792138 helicase with zinc finger domain [Homo sapiens]
Length = 1942
Score = 39.3 bits (90), Expect = 0.025
Identities = 78/308 (25%), Positives = 108/308 (35%), Gaps = 69/308 (22%)
Query: 402 FSPRPIPSPHPVSQK----ISKIQP----SVPELSLVLDGNFIESNPLPTPLEMVNNE-- 451
++P P PHP K + +I P S+ + V GN + S PLP P
Sbjct: 1162 YTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYGGNVVMSVPLPVPWTGYQGRFA 1221
Query: 452 -NPPLINH----LEHLKPLQ------PQLYDEKHSPEVEAGEPSLRGIPNQLNQDKPALL 500
+P +I H ++ LQ P Y H P V G+P NQ
Sbjct: 1222 VDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPVTIGQPQ-----NQ--------- 1267
Query: 501 RHCKVRQPPAYKKGNPHTRNS-IKPSSHNGPSHDIFEKLQTVSAGNVQNEEYPIRPS--- 556
H + Q + G T NS + + P E Q N QN RPS
Sbjct: 1268 -HQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKKPTEPKQVDLESNPQNRSPESRPSVVY 1326
Query: 557 ---------TLNSRQSSLAPQSQPHDFVFSPHNSGRPMELQIPTPPLPSYCSTNVCRCCQ 607
LN R +L P PH P+ P+ Q+P PP P Q
Sbjct: 1327 PSTKFPRKDNLNPRHINL-PLPAPHAQYAIPNRHFHPLP-QLPRPPFP---------IPQ 1375
Query: 608 HHSHIQYSPLNSWQGANTV----GSIQDVQSEALQKHSLFHPSGCPALYC---NAFCSSS 660
H+ + N + N + + QS+ Q+ P PA NAF +S+
Sbjct: 1376 QHTLLNQQQNNLPEQPNQIPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSA 1435
Query: 661 SPIALRPQ 668
+A RPQ
Sbjct: 1436 --VAHRPQ 1441
>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
Length = 748
Score = 39.3 bits (90), Expect = 0.025
Identities = 55/226 (24%), Positives = 80/226 (35%), Gaps = 24/226 (10%)
Query: 491 QLNQDKPALLRHCKVRQPPAYKKGNPHTRNSIKPSSHNGPSHDIFEKLQTVS-AGNVQNE 549
Q Q + AL ++QPP + P PS + ++LQ + + Q
Sbjct: 256 QQQQQQQALQAQPPIQQPPMQQPQPP-------------PSQALPQQLQQMHHTQHHQPP 302
Query: 550 EYPIRPSTLNSRQSSLAPQSQPHDFVFSPHNSGRPMELQIPTPPLPSYCSTNVCRC--CQ 607
P +P ++ S L PQSQ V P ++ PPL + V + Q
Sbjct: 303 PQPQQPPVAQNQPSQLPPQSQTQPLVSQAQ--ALPGQMLYTQPPLKFVRAPMVVQQPPVQ 360
Query: 608 HHSHIQYSPLNSWQGANTVGSIQDVQSEALQKHSLFHPSGCPALYCNAFCSSSSPIALRP 667
Q + + + Q A V V +L S S P S P P
Sbjct: 361 PQVQQQQTAVQTAQAAQMVAPGVQVSQSSLPMLS----SPSPGQQVQTPQSMPPPPQPSP 416
Query: 668 QGDMGSCSPHSNIEPSPVARPPSHMDLCNPQP--CTVCMHTPKTES 711
Q S P+SN+ P P S + +PQP V TP+ S
Sbjct: 417 QPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFS 462
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 37.4 bits (85), Expect = 0.093
Identities = 66/267 (24%), Positives = 87/267 (32%), Gaps = 64/267 (23%)
Query: 358 ESQNAETEFFSKASKNFSIKRSSQKLSSGKMPIHD--HDSGVEDEDFSPRPIPSPHPVSQ 415
+S + ++ S K S G+ P+ H SG + + P P P V
Sbjct: 120 DSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPD-VGS 178
Query: 416 KISKIQPSVPEL------------SLVLDGNFIESNPLPTPLEMVNNENPPLINHLEHLK 463
K I P VP S + G + +P PTP N L
Sbjct: 179 KPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQS 238
Query: 464 PLQPQLYDEKHSPEVEAGEPSLRGIPNQLNQDKPALLRHCKVRQPPAYKKGNPHTRNSIK 523
PL S + P L P++ DKP PP GN +
Sbjct: 239 PLS--------SSSPFSNRPPLPPTPSRALDDKPP---------PPPPPVGN-------R 274
Query: 524 PSSHNGPSHDIFEKLQTVSAGNVQNEEYPIRPSTLNSRQSSLAPQ-----SQPHDFVFSP 578
PS H + V QN + P+ PST SS AP S+P P
Sbjct: 275 PSIHR----------EAVPPPPPQNNKPPV-PSTPRPSASSQAPPPPPPPSRPGPPPLPP 323
Query: 579 HNSG---------RPMELQIPTPPLPS 596
+SG R + L TPPLPS
Sbjct: 324 SSSGNDETPRLPQRNLSLSSSTPPLPS 350
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 37.4 bits (85), Expect = 0.093
Identities = 66/267 (24%), Positives = 87/267 (32%), Gaps = 64/267 (23%)
Query: 358 ESQNAETEFFSKASKNFSIKRSSQKLSSGKMPIHD--HDSGVEDEDFSPRPIPSPHPVSQ 415
+S + ++ S K S G+ P+ H SG + + P P P V
Sbjct: 120 DSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPD-VGS 178
Query: 416 KISKIQPSVPEL------------SLVLDGNFIESNPLPTPLEMVNNENPPLINHLEHLK 463
K I P VP S + G + +P PTP N L
Sbjct: 179 KPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQS 238
Query: 464 PLQPQLYDEKHSPEVEAGEPSLRGIPNQLNQDKPALLRHCKVRQPPAYKKGNPHTRNSIK 523
PL S + P L P++ DKP PP GN +
Sbjct: 239 PLS--------SSSPFSNRPPLPPTPSRALDDKPP---------PPPPPVGN-------R 274
Query: 524 PSSHNGPSHDIFEKLQTVSAGNVQNEEYPIRPSTLNSRQSSLAPQ-----SQPHDFVFSP 578
PS H + V QN + P+ PST SS AP S+P P
Sbjct: 275 PSIHR----------EAVPPPPPQNNKPPV-PSTPRPSASSQAPPPPPPPSRPGPPPLPP 323
Query: 579 HNSG---------RPMELQIPTPPLPS 596
+SG R + L TPPLPS
Sbjct: 324 SSSGNDETPRLPQRNLSLSSSTPPLPS 350
>gi|226817313 SH3 and multiple ankyrin repeat domains 2 isoform 1
[Homo sapiens]
Length = 1849
Score = 37.0 bits (84), Expect = 0.12
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 422 PSVPELSLVLDGNFIESNPLPTPLEMVNNENPP-----LINHLEHLKPLQPQLYDEKHSP 476
P P S+ LD +FI + PLP PLE N+ + P + L L ++ + D SP
Sbjct: 1392 PPPPLASVDLDEDFIFTEPLPPPLEFANSFDIPDDRAASVPALSDL--VKQKKSDTPQSP 1449
Query: 477 EVEAGEPSLRGIPNQLNQDKPALLRHC 503
+ + +P+ N + KPA L +C
Sbjct: 1450 SLNSSQPT-----NSADSKKPASLSNC 1471
>gi|64085167 SH2 containing inositol phosphatase isoform a [Homo
sapiens]
Length = 1189
Score = 36.2 bits (82), Expect = 0.21
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 445 LEMVNNENPPLINHLEHLKPLQPQLYDEKHSPEVEAGEPSLRGIPNQLNQDKPALLRHCK 504
+E EN L+ HL++ PL+ + D PE + E S+ P ++ P C+
Sbjct: 83 IEFYKKENMGLVTHLQYPVPLEEE--DTGDDPEEDTVE-SVVSPPELPPRNIPLTASSCE 139
Query: 505 VRQPPAYKKGNPHTRNSIKPSSHNGPSHDIFEKLQTVSAGNVQNE 549
++ P + NP + +PS S +F++LQ++ + E
Sbjct: 140 AKEVP-FSNENPRATETSRPSL----SETLFQRLQSMDTSGLPEE 179
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 35.8 bits (81), Expect = 0.27
Identities = 42/159 (26%), Positives = 63/159 (39%), Gaps = 22/159 (13%)
Query: 383 LSSGKMPIHDHDSGVEDEDFSPRPIPSPHPVSQKISK--------IQPSVPELSLVLDGN 434
++SG+ P + GV SPR P P S + S+ + P P + V DG
Sbjct: 1504 VTSGRGPPSEDGPGVPPP--SPRRSVPPSPTSPRASEENGLPLLVLPPPAPSVD-VEDGE 1560
Query: 435 FIESNPLPTPLEMVNN-ENP--PLINHLEHLKPLQPQLYDEKHSPEVEAGEPSLRGIPNQ 491
F+ PLP PLE N+ E P PL H P P +P P++ P
Sbjct: 1561 FLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDTP----APATPLPPVPPPAVAAAPPT 1616
Query: 492 LNQDKPALLRH----CKVRQPPAYKKGNPHTRNSIKPSS 526
L+ +L + + Q + G+PH P++
Sbjct: 1617 LDSTASSLTSYDSEVATLTQGASAAPGDPHPPGPPAPAA 1655
>gi|40254823 SH2 containing inositol phosphatase isoform b [Homo
sapiens]
Length = 1188
Score = 35.0 bits (79), Expect = 0.46
Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Query: 445 LEMVNNENPPLINHLEHLKPLQPQLYDEKHSPEVEAGEPSLRGIPNQLNQDKPALLRHCK 504
+E EN L+ HL++ PL+ +E + E S+ P ++ P C+
Sbjct: 83 IEFYKKENMGLVTHLQYPVPLE----EEDTGDDPEEDTESVVSPPELPPRNIPLTASSCE 138
Query: 505 VRQPPAYKKGNPHTRNSIKPSSHNGPSHDIFEKLQTVSAGNVQNE 549
++ P + NP + +PS S +F++LQ++ + E
Sbjct: 139 AKEVP-FSNENPRATETSRPSL----SETLFQRLQSMDTSGLPEE 178
>gi|76563940 synuclein alpha interacting protein [Homo sapiens]
Length = 919
Score = 34.7 bits (78), Expect = 0.60
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 10/163 (6%)
Query: 726 LTEQDRQLRLLQAQIQRLLEAQS-------LMPCSPKTTAVEDTVQAGRQMELVSVEAQS 778
L EQ + LQ Q+Q+ LEAQ P SP + A + + SV A+S
Sbjct: 529 LKEQTVERVTLQNQLQQFLEAQKSEGKSLPSSPSSPSSPASRKSQWKSPDADDDSV-AKS 587
Query: 779 SPGLHMRKGVSIAVSTGASLFWNAAGEDQEPDSQMKQDDTKISSEDMNFSVDINNEVTSL 838
PG +++G+ + S AS +D++ D ++Q K SE++ ++ E
Sbjct: 588 KPG--VQEGIQVLGSLSASSRARPKAKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDA 645
Query: 839 PGSASSLKAVDIPSFEESNIAVEEEFNQPLSVSNSSLVVRKEP 881
S+ + K + + E + + + LS S++ ++P
Sbjct: 646 QASSRNSKKIPLEKRELKLARLRQLMQRSLSESDTDSNNSEDP 688
>gi|21359951 RNA binding motif protein 42 [Homo sapiens]
Length = 480
Score = 34.7 bits (78), Expect = 0.60
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 425 PELSLVLDGNFIESNPLPTPLEMVNNENPPLINHLEHLKPLQPQLYDEKHSPEVEAGEPS 484
P L L L E PLP PLE+V PPL + L L+P+ PE G +
Sbjct: 282 PSLPLALAMPLPEPEPLPLPLEVVRGLLPPL--RIPELLSLRPR--PRPPRPEPPPGLMA 337
Query: 485 LRGIPNQLNQD----KPALLRHC 503
L +P L +D KP L+ C
Sbjct: 338 LE-VPEPLGEDKKKGKPEKLKRC 359
>gi|194440673 THAP domain containing 5 isoform 2 [Homo sapiens]
Length = 353
Score = 34.7 bits (78), Expect = 0.60
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 25/165 (15%)
Query: 1134 NSEDEEEPPDNADSKSEYLLNQNLRSIPEQLGGQKEPSKNDHEIINCSNCESVGTNADTP 1193
N EDE+E A S+ ++LN+ ++I + P E+++ S+ P
Sbjct: 62 NLEDEKEVCPKAKSEESFVLNETKKNIVNTDVPHQHP-----ELLHSSSL----VKPPAP 112
Query: 1194 VLRNITNEVLQTKAKQQLTEKPAFLVKNLKPSPAVNLRTGKAEFTQHPEKENEGDITI-- 1251
+I N +L +Q T KP ++ +VN TG+ F E N IT+
Sbjct: 113 KTGSIQNNMLTLNLVKQHTGKPESTLET-----SVNQDTGRGGFHTCFENLNSTTITLTT 167
Query: 1252 -----FPESLQPSETLK----QMNSMNSVGTFLDVKRLRQLPKLF 1287
+SL+ E L+ + + N +++K ++ P LF
Sbjct: 168 SNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLF 212
>gi|194440668 THAP domain containing 5 isoform 1 [Homo sapiens]
Length = 395
Score = 34.7 bits (78), Expect = 0.60
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 25/165 (15%)
Query: 1134 NSEDEEEPPDNADSKSEYLLNQNLRSIPEQLGGQKEPSKNDHEIINCSNCESVGTNADTP 1193
N EDE+E A S+ ++LN+ ++I + P E+++ S+ P
Sbjct: 104 NLEDEKEVCPKAKSEESFVLNETKKNIVNTDVPHQHP-----ELLHSSSL----VKPPAP 154
Query: 1194 VLRNITNEVLQTKAKQQLTEKPAFLVKNLKPSPAVNLRTGKAEFTQHPEKENEGDITI-- 1251
+I N +L +Q T KP ++ +VN TG+ F E N IT+
Sbjct: 155 KTGSIQNNMLTLNLVKQHTGKPESTLET-----SVNQDTGRGGFHTCFENLNSTTITLTT 209
Query: 1252 -----FPESLQPSETLK----QMNSMNSVGTFLDVKRLRQLPKLF 1287
+SL+ E L+ + + N +++K ++ P LF
Sbjct: 210 SNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLF 254
>gi|54607116 leiomodin 3 (fetal) [Homo sapiens]
Length = 560
Score = 34.7 bits (78), Expect = 0.60
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 1113 NNMSFATKKYMKRYGLLQSSDNSEDEEEPPDNADSKSEYLLNQNLRSIPEQLGGQKEPSK 1172
NN A K+ K +Q +D EDEEE D+ D + E ++ + E+ G KE
Sbjct: 124 NNEIVANKRESKGSSNIQETDE-EDEEEEDDDDDDEGEDDGEESEETNREEEGKAKE--- 179
Query: 1173 NDHEIINC-SNCESVGTNA-----DTPVLRNITNEVLQTKAKQQLTEKPAFLVKNLKPS 1225
+I NC +NC+ V A D P + + + + ++L +FL + +PS
Sbjct: 180 ---QIRNCENNCQQVTDKAFKEQRDRPEAQEQSEKKISKLDPKKLALDTSFLKVSTRPS 235
>gi|46370082 transcription factor 12 isoform a [Homo sapiens]
Length = 706
Score = 34.3 bits (77), Expect = 0.79
Identities = 86/424 (20%), Positives = 154/424 (36%), Gaps = 48/424 (11%)
Query: 556 STLNSRQSSLAPQSQPHDFVFSPHNSGRPMELQIPTPPLPSY----CSTNVCRCCQHHSH 611
ST + QSS HD + P +S P ++ PP+ S+ S++ H
Sbjct: 256 STSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASHTPP 315
Query: 612 IQYSPLNSWQGANTVGSIQDVQSEALQKHSLFHPSGCPALYCNAFCSSSSPIALRPQGDM 671
I S N GS Q + S++ P +SS P +
Sbjct: 316 INGSDSILGTRGNAAGSSQTGDALGKALASIYSPD-----------HTSSSFPSNPSTPV 364
Query: 672 GSCSPHSNIE--PSPVARPPSHMDLCNPQPCTVCMHTPKTESDNGMMGLSPDAYRFLTEQ 729
GS SP + P P + PS N +H+ K + + DA FL +
Sbjct: 365 GSPSPLTGTSQWPRPGGQAPSSPSYEN------SLHSLKNRVEQQLHEHLQDAMSFLKDV 418
Query: 730 DRQLRLLQAQIQRLLEAQSLMPCSPKTTAVEDTVQAGR-QMELVSVEAQSSP--GLHMRK 786
Q R ++ ++ RL +A ++ ++ AG + + + ++P L+
Sbjct: 419 CEQSR-MEDRLDRLDDAIHVL--RNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNY 475
Query: 787 GVSIAVSTGASLFWNAAGEDQEPDSQMKQDDTKISSEDMNFSVDINNEVTS--LPGSASS 844
G S V++ S + G +E + + + +SS S D+N++ G S
Sbjct: 476 GGSSLVASSRSA--SMVGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQ 533
Query: 845 LKAVDIPSFEESNIAVEEEFNQPLSVSNSSLVVRKEPDVPVFFPSGQLAESVSMCLQTGP 904
V + N +E ++P S D+ S Q VS G
Sbjct: 534 SGTVVTTEIKTENKEKDENLHEPPS----------SDDMKSDDESSQKDIKVS---SRGR 580
Query: 905 TGGASNNSETSEEPKIEHVMQPLLHQPSDNQKIYQDLLGQVNHL--LNSSSKETEQPSTK 962
T + + + + E KIE + + + + +D+ L + ++E+P TK
Sbjct: 581 TSSTNEDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTK 640
Query: 963 AVII 966
+I+
Sbjct: 641 LLIL 644
>gi|46370080 transcription factor 12 isoform a [Homo sapiens]
Length = 706
Score = 34.3 bits (77), Expect = 0.79
Identities = 86/424 (20%), Positives = 154/424 (36%), Gaps = 48/424 (11%)
Query: 556 STLNSRQSSLAPQSQPHDFVFSPHNSGRPMELQIPTPPLPSY----CSTNVCRCCQHHSH 611
ST + QSS HD + P +S P ++ PP+ S+ S++ H
Sbjct: 256 STSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASHTPP 315
Query: 612 IQYSPLNSWQGANTVGSIQDVQSEALQKHSLFHPSGCPALYCNAFCSSSSPIALRPQGDM 671
I S N GS Q + S++ P +SS P +
Sbjct: 316 INGSDSILGTRGNAAGSSQTGDALGKALASIYSPD-----------HTSSSFPSNPSTPV 364
Query: 672 GSCSPHSNIE--PSPVARPPSHMDLCNPQPCTVCMHTPKTESDNGMMGLSPDAYRFLTEQ 729
GS SP + P P + PS N +H+ K + + DA FL +
Sbjct: 365 GSPSPLTGTSQWPRPGGQAPSSPSYEN------SLHSLKNRVEQQLHEHLQDAMSFLKDV 418
Query: 730 DRQLRLLQAQIQRLLEAQSLMPCSPKTTAVEDTVQAGR-QMELVSVEAQSSP--GLHMRK 786
Q R ++ ++ RL +A ++ ++ AG + + + ++P L+
Sbjct: 419 CEQSR-MEDRLDRLDDAIHVL--RNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNY 475
Query: 787 GVSIAVSTGASLFWNAAGEDQEPDSQMKQDDTKISSEDMNFSVDINNEVTS--LPGSASS 844
G S V++ S + G +E + + + +SS S D+N++ G S
Sbjct: 476 GGSSLVASSRSA--SMVGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQ 533
Query: 845 LKAVDIPSFEESNIAVEEEFNQPLSVSNSSLVVRKEPDVPVFFPSGQLAESVSMCLQTGP 904
V + N +E ++P S D+ S Q VS G
Sbjct: 534 SGTVVTTEIKTENKEKDENLHEPPS----------SDDMKSDDESSQKDIKVS---SRGR 580
Query: 905 TGGASNNSETSEEPKIEHVMQPLLHQPSDNQKIYQDLLGQVNHL--LNSSSKETEQPSTK 962
T + + + + E KIE + + + + +D+ L + ++E+P TK
Sbjct: 581 TSSTNEDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTK 640
Query: 963 AVII 966
+I+
Sbjct: 641 LLIL 644
>gi|148612879 polyhomeotic like 3 [Homo sapiens]
Length = 995
Score = 33.9 bits (76), Expect = 1.0
Identities = 92/474 (19%), Positives = 165/474 (34%), Gaps = 63/474 (13%)
Query: 546 VQNEEYPIRPSTLNSRQSSLAPQSQPHDFVFSPHNSGRPMELQIPTPPLPSYCSTNVCRC 605
+QN P PS S+ S QS P SP+ S + + +PP P S +
Sbjct: 367 LQNHGLPPAPSNAQSQHCSPI-QSHPSPLTVSPNQSQSAQQSVVVSPPPPHSPSQSPTII 425
Query: 606 CQHHSHIQYSPLNSWQGANTVGSIQDVQSEALQKHSLFHPSGCPALYCNAFCS--SSSPI 663
+ IQ PL S ALQ S + A + S P+
Sbjct: 426 IHPQALIQPHPL---------------VSSALQPGPNLQQSTANQVQATAQLNLPSHLPL 470
Query: 664 ALRPQGDMGSCSPHSNIEPSPVARPPSHMDLCNPQPCTVCMHTPKTESDNGMMGLSP--- 720
P +G + + P PSH + Q + + +P S + + P
Sbjct: 471 PASPVVHIGPVQQSALVSPGQQIVSPSHQQYSSLQSSPIPIASPPQMSTSPPAQIPPLPL 530
Query: 721 DAYRFLTEQDRQLRLLQAQIQRLLEAQSLMPCSPKTTAVEDTVQAGRQMELVSVEAQSSP 780
+ + L Q L Q +Q L ++ +P + V+ Q + V+V Q P
Sbjct: 531 QSMQSLQVQPEILSQGQVLVQNALVSEEELPAA--EALVQLPFQTLPPPQTVAVNLQVQP 588
Query: 781 GLHMRKGVSIAVSTGASLFWNAAGED--QEPDSQMKQDDTKISSEDMNFSVDINNEVTSL 838
+ V V + E+ +E D ++ D T ++ + L
Sbjct: 589 PAPVDPPVVYQVE-------DVCEEEMPEESDECVRMDRTPPPPTLSPAAITVGRG-EDL 640
Query: 839 PGSASSLKAVDIPSFEESNIAVEEEFNQPLSVSNSSLVVRKEPDVPVFFPSGQLAESVSM 898
L+ V++P+ + +V + + P VS P P+ P+
Sbjct: 641 TSEHPLLEQVELPAVASVSASVIKSPSDPSHVS--------VPPPPLLLPAA-------- 684
Query: 899 CLQTGPTGGASNNSETSEEPKIEHVMQPLLHQPSDNQKIYQDLL---GQVNHLLNSSSKE 955
T +++ S S P IE+ + +P + + + G ++ SS
Sbjct: 685 ------TTRSNSTSMHSSIPSIENKPPQAIVKPQILTHVIEGFVIQEGLEPFPVSRSSLL 738
Query: 956 TEQPSTKAVIISHE-----CTRTQNVYHTKKKTHHSRLVDKDCVLNATLKQLRS 1004
EQP K ++ ++ C + + +TK + S +D + TL+++ S
Sbjct: 739 IEQPVKKRPLLDNQVINSVCVQPELQNNTKHADNSSDTEMEDMIAEETLEEMDS 792
>gi|13129016 DET1 and DDB1 associated 1 [Homo sapiens]
Length = 102
Score = 33.5 bits (75), Expect = 1.3
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 13/92 (14%)
Query: 16 FPSSRMVPFHFPPSKCALWNPTPTGDFIYLHLSYYRNPKLVVTEKT-IRLAYRHAKQNKK 74
+ S FH S C N P+ +YL Y + +++VTEKT I L Y H + +KK
Sbjct: 11 YNKSNFSRFH-ADSVCKASNRRPS---VYLPTREYPSEQIIVTEKTNILLRYLHQQWDKK 66
Query: 75 NSSCFLLGSLTADEDEEGVTLTVDRFDPGREV 106
N++ D+E V L + P R+V
Sbjct: 67 NAA--------KKRDQEQVELEGESSAPPRKV 90
>gi|6005824 Sec23-interacting protein p125 [Homo sapiens]
Length = 1000
Score = 33.5 bits (75), Expect = 1.3
Identities = 46/223 (20%), Positives = 81/223 (36%), Gaps = 50/223 (22%)
Query: 363 ETEFFSKASKNFS----IKRSSQKLSS-GKMPIHDHDSGVEDEDFSPRPIPS-------- 409
+T + A + FS + SS + G+ P+ + V F P+P+ +
Sbjct: 69 QTSIHTSAPQTFSYFSQVSSSSDPFGNIGQSPLTTAATSVGQSGF-PKPLTALPFTTGSQ 127
Query: 410 --PHPVSQKISKIQPSVPELSLVLDGNFIESNPLPTPLEMVNNENPPLINHLEHLKPLQP 467
+ S ISK QP P SL+ +++ S P P N+ + QP
Sbjct: 128 DVSNAFSPSISKAQPGAPPSSLMGINSYLPSQPSSLPPSYFGNQPQGI---------PQP 178
Query: 468 QLYDEKHSPEVEAGEPSLRGIPNQLNQDKPALLRHCKVRQPPAYKKGN------------ 515
+H+P P + P L+ C+ PPA+ +
Sbjct: 179 GYNPYRHTPGSSRANPYI----------APPQLQQCQTPGPPAHPPPSGPPVQMYQMPPG 228
Query: 516 --PHTRNSIK-PSSHNGPSHDIFEKLQTVSAGNVQNEEYPIRP 555
P +S++ P+ P+ +Q S +QN+ P++P
Sbjct: 229 SLPPVPSSVQSPAQQQVPARPGAPSVQVPSPFLLQNQYEPVQP 271
>gi|23397666 transcriptional co-repressor Sin3A [Homo sapiens]
Length = 1273
Score = 33.1 bits (74), Expect = 1.8
Identities = 38/148 (25%), Positives = 55/148 (37%), Gaps = 27/148 (18%)
Query: 466 QPQLYDE-----KHSPEVEAGEPSLRGIPNQLNQDKPALLRHCKVRQPPAYK---KGNPH 517
QPQ+Y++ K P + +QL + P L+ PP YK + N
Sbjct: 140 QPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTNDM 199
Query: 518 TRNSIKPSSHNGPSHDIFEKLQTVSAGNVQNEEYPIRPSTLNSRQSSLAPQSQPHDFVFS 577
+ H P+H I + Q ++P +PS S + P QP
Sbjct: 200 VNVTTPGQVHQIPTHGIQPQPQPPP-------QHPSQPSA-QSAPAPAQPAPQP-----P 246
Query: 578 PHNSGRPMELQI------PTPPLPSYCS 599
P +P +LQ TPPLP Y S
Sbjct: 247 PAKVSKPSQLQAHTPASQQTPPLPPYAS 274
>gi|223941785 transcriptional co-repressor Sin3A [Homo sapiens]
Length = 1273
Score = 33.1 bits (74), Expect = 1.8
Identities = 38/148 (25%), Positives = 55/148 (37%), Gaps = 27/148 (18%)
Query: 466 QPQLYDE-----KHSPEVEAGEPSLRGIPNQLNQDKPALLRHCKVRQPPAYK---KGNPH 517
QPQ+Y++ K P + +QL + P L+ PP YK + N
Sbjct: 140 QPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTNDM 199
Query: 518 TRNSIKPSSHNGPSHDIFEKLQTVSAGNVQNEEYPIRPSTLNSRQSSLAPQSQPHDFVFS 577
+ H P+H I + Q ++P +PS S + P QP
Sbjct: 200 VNVTTPGQVHQIPTHGIQPQPQPPP-------QHPSQPSA-QSAPAPAQPAPQP-----P 246
Query: 578 PHNSGRPMELQI------PTPPLPSYCS 599
P +P +LQ TPPLP Y S
Sbjct: 247 PAKVSKPSQLQAHTPASQQTPPLPPYAS 274
>gi|223941782 transcriptional co-repressor Sin3A [Homo sapiens]
Length = 1273
Score = 33.1 bits (74), Expect = 1.8
Identities = 38/148 (25%), Positives = 55/148 (37%), Gaps = 27/148 (18%)
Query: 466 QPQLYDE-----KHSPEVEAGEPSLRGIPNQLNQDKPALLRHCKVRQPPAYK---KGNPH 517
QPQ+Y++ K P + +QL + P L+ PP YK + N
Sbjct: 140 QPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTNDM 199
Query: 518 TRNSIKPSSHNGPSHDIFEKLQTVSAGNVQNEEYPIRPSTLNSRQSSLAPQSQPHDFVFS 577
+ H P+H I + Q ++P +PS S + P QP
Sbjct: 200 VNVTTPGQVHQIPTHGIQPQPQPPP-------QHPSQPSA-QSAPAPAQPAPQP-----P 246
Query: 578 PHNSGRPMELQI------PTPPLPSYCS 599
P +P +LQ TPPLP Y S
Sbjct: 247 PAKVSKPSQLQAHTPASQQTPPLPPYAS 274
>gi|236459851 ubinuclein 2 [Homo sapiens]
Length = 1347
Score = 33.1 bits (74), Expect = 1.8
Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 20/175 (11%)
Query: 403 SPRPIPSPHPVSQKISKIQPSVPELSLVLDGNFIESNPLPTPLEMVNNENP-PLINHLEH 461
SP+P+PSP P + +PS+ V +SNP P P ++ +P L+ H
Sbjct: 1048 SPKPLPSPKPSASP----KPSLSAKPSVSTKLISKSNPTPKPTVSPSSSSPNALVAQGSH 1103
Query: 462 LKPLQPQLYDEKHSPEVEAGEPSLRGIPNQLNQDKPALLRHCKVRQPPAYKKGNPHTRNS 521
P ++ + + P+L +P+ P K Q P+ K N + +
Sbjct: 1104 SSTNSP-VHKQPSGMNISRQSPTLNLLPSSRTSGLPP----TKNLQAPS-KLTNSSSTGT 1157
Query: 522 IKPSSHNGPSHDIFEKLQTVSAGNVQNEEYPIRPS----TLNSRQSSLAPQSQPH 572
+ +S +G + ++ S G+ N R S T + Q + P S PH
Sbjct: 1158 VGKNSLSGIAMNV-----PASRGSNLNSSGANRTSLSGGTGSGTQGATKPLSTPH 1207
>gi|239754590 PREDICTED: similar to hCG1779533 [Homo sapiens]
Length = 248
Score = 33.1 bits (74), Expect = 1.8
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 622 GANTVGSIQDVQSEALQKHSLFHPSGCPALYCNAFCSSSSPIALRPQGDMGSCSPHSNIE 681
G + S Q VQ++ L + LF PS C L+ C + + + RPQ +
Sbjct: 101 GGPSSDSWQPVQAQLLPYNGLFSPSSC--LFAGGSCPAPTGLC-RPQTASSQAFQAHLLP 157
Query: 682 PSPVARPPSHMDLCNPQP 699
P+ + RP S + + +P P
Sbjct: 158 PNGLDRPSSCVTMASPGP 175
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,373,657
Number of Sequences: 37866
Number of extensions: 2803395
Number of successful extensions: 7187
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 7101
Number of HSP's gapped (non-prelim): 164
length of query: 1287
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1173
effective length of database: 13,930,794
effective search space: 16340821362
effective search space used: 16340821362
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.